AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1069990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069990 MtrunA17_Chr7g0252151 97.933 1016 20 1 1 1015 46 1061 0.0 2071
Msa1069990 MtrunA17_Chr3g0131651 71.672 999 274 4 14 1005 18 1014 0.0 1501
Msa1069990 MtrunA17_Chr7g0252171 68.955 1005 306 3 6 1006 6 1008 0.0 1449
Msa1069990 MtrunA17_Chr8g0371581 60.396 1010 386 8 6 1005 13 1018 0.0 1263
Msa1069990 MtrunA17_Chr6g0451931 28.490 881 472 26 36 819 138 957 1.11e-80 285
Msa1069990 MtrunA17_Chr3g0081881 79.592 49 10 0 48 96 11 59 1.00e-20 87.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069990 AT5G13980.1 70.993 1017 276 9 1 1006 3 1011 0.0 1510
Msa1069990 AT5G13980.2 70.993 1017 276 9 1 1006 3 1011 0.0 1510
Msa1069990 AT3G26720.1 65.805 1006 337 5 3 1006 4 1004 0.0 1407
Msa1069990 AT5G13980.3 71.737 927 246 8 1 919 3 921 0.0 1401
Msa1069990 AT3G26720.5 65.405 951 323 4 3 951 4 950 0.0 1328
Msa1069990 AT3G26720.2 65.817 942 316 4 3 942 4 941 0.0 1324
Msa1069990 AT3G26720.3 65.978 920 307 4 3 920 4 919 0.0 1301
Msa1069990 AT3G26720.4 65.978 920 307 4 3 920 4 919 0.0 1300
Msa1069990 AT5G66150.2 58.466 1004 394 5 23 1005 33 1034 0.0 1220
Msa1069990 AT5G66150.1 58.507 1005 393 6 23 1005 33 1035 0.0 1217
Msa1069990 AT5G66150.3 56.393 743 300 6 285 1005 1 741 0.0 853
Msa1069990 AT5G14950.1 26.614 883 489 25 36 819 152 974 6.34e-69 251

Find 234 sgRNAs with CRISPR-Local

Find 611 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACACAGTCTGTTTCATTTA+AGG 0.107139 7_2:+65834533 None:intergenic
GCAAGACAGTTAGAATATTT+TGG 0.154594 7_2:-65837953 Msa1069990:CDS
AGCTCCACAGTTAGCTCTTT+TGG 0.172212 7_2:+65832508 None:intergenic
GCAAAATATCCAAGAATTAA+AGG 0.186569 7_2:+65832331 None:intergenic
ATTTCATAAGCTTGTTTAAA+AGG 0.188800 7_2:+65832385 None:intergenic
GTGAGTTACCTTTACTATTC+AGG 0.192715 7_2:-65836399 Msa1069990:CDS
GTTTCTTGCATTAACATAAT+TGG 0.198476 7_2:+65836615 None:intergenic
AACATTTATGGAAGCTGTTT+TGG 0.203392 7_2:+65832285 None:intergenic
AGTCTGAAGCCTTTAATTCT+TGG 0.215604 7_2:-65832340 Msa1069990:three_prime_UTR
ATTAATGAGTGGCTATTATT+TGG 0.217723 7_2:-65838070 Msa1069990:intron
TGCTGTGCAGGCTTACTTAT+TGG 0.224801 7_2:-65840412 Msa1069990:CDS
CAGATCGTGCCAATGGTTTC+TGG 0.227896 7_2:-65838137 Msa1069990:CDS
ACTTGTTGAAACTTTATAAC+TGG 0.232743 7_2:+65837638 None:intergenic
CACTCGGATTTCAACTACTA+TGG 0.233395 7_2:-65835654 Msa1069990:CDS
ACCTAAGAATGGAACTTATT+AGG 0.240344 7_2:-65832218 Msa1069990:three_prime_UTR
CCTTGACATAGTAGTTTCTT+AGG 0.253999 7_2:+65836952 None:intergenic
CTTTACTATTCAGGGTATAA+TGG 0.264566 7_2:-65836390 Msa1069990:CDS
GCTGTGCAGGCTTACTTATT+GGG 0.265077 7_2:-65840411 Msa1069990:CDS
TTCTATGGTTCATGCTCTAT+TGG 0.267475 7_2:-65841329 Msa1069990:CDS
CATTTCGAACCTGTCTTTCA+TGG 0.277535 7_2:+65836204 None:intergenic
CATTGTTATTATAACATTAC+AGG 0.284184 7_2:-65833775 Msa1069990:intron
TCATCGTTTACCTTCTTTCC+TGG 0.286122 7_2:+65833249 None:intergenic
ACCTAATAAGTTCCATTCTT+AGG 0.289617 7_2:+65832217 None:intergenic
TGGTTCCAACAATTCTATTC+AGG 0.289808 7_2:-65841467 Msa1069990:intron
TCAAAATGTGTTGGATTCTA+TGG 0.291822 7_2:-65841344 Msa1069990:CDS
GTTGAATCAACATCAGTTAC+TGG 0.292971 7_2:-65837671 Msa1069990:CDS
CTCTGTCCTTTCTTGATTTG+CGG 0.300354 7_2:+65832609 None:intergenic
GTTACTACTATCAAAGTAAA+TGG 0.302432 7_2:+65832459 None:intergenic
TCAGCTAATGAGTCTGTATT+TGG 0.303542 7_2:+65837911 None:intergenic
TGGAGGAGAATCAAAGTTTA+TGG 0.311072 7_2:-65841596 Msa1069990:CDS
TCAATTTGCCAACCAATTCT+TGG 0.320808 7_2:+65840450 None:intergenic
TAAGACAGAATTCTCAGTTT+TGG 0.326220 7_2:-65835006 Msa1069990:CDS
TACTATGTCAAGGCATATTT+AGG 0.326890 7_2:-65836942 Msa1069990:CDS
ACCAGTTCAACTTCTGTTGC+AGG 0.327123 7_2:+65837442 None:intergenic
AGACTTGTTTGGAAAGTAGA+AGG 0.327254 7_2:-65832574 Msa1069990:CDS
GCTAAATGGCGCCGTACTTT+TGG 0.328700 7_2:-65834009 Msa1069990:CDS
GAAGTGCACCAGCCCGTTGC+TGG 0.334798 7_2:-65835331 Msa1069990:CDS
CGTGTCTTCCAGATCTTTGC+TGG 0.341952 7_2:-65840053 Msa1069990:intron
TGGAGAAGAAAAGACTTGTT+TGG 0.356314 7_2:-65832585 Msa1069990:CDS
GAGAACTATGAACCTCCTTC+TGG 0.360730 7_2:-65840020 Msa1069990:CDS
GTTAAGCAGCTTGTTAGTTC+GGG 0.360901 7_2:-65840734 Msa1069990:CDS
TCAGTTTCTGTACCACCATT+TGG 0.361418 7_2:-65836879 Msa1069990:CDS
AGATAGGAATAAACGCAAAA+AGG 0.361623 7_2:-65840260 Msa1069990:CDS
AGTTAAGCAGCTTGTTAGTT+CGG 0.361974 7_2:-65840735 Msa1069990:CDS
TTACCAACTCCATCTTCAAT+AGG 0.369060 7_2:+65835686 None:intergenic
CCTTGGGTGAGGGAGCTAAA+TGG 0.374069 7_2:-65834023 Msa1069990:CDS
CGAACTCCTCTTTCAGAAAT+CGG 0.375393 7_2:+65840481 None:intergenic
TTTATAAGATGTGTTCCATT+TGG 0.376310 7_2:+65836227 None:intergenic
CTGAATAAGTGAGTAATTTG+AGG 0.381059 7_2:-65832190 Msa1069990:three_prime_UTR
GTAGGATTGATTACCAAGAT+AGG 0.385922 7_2:-65840276 Msa1069990:CDS
TTGTCCTTTCAGATTAATCT+TGG 0.387749 7_2:-65835047 Msa1069990:intron
CTTTGTGCAGGCAGAGGAAC+TGG 0.389496 7_2:-65837717 Msa1069990:intron
TTCGATTTGACTCCAAGAAT+TGG 0.390690 7_2:-65840462 Msa1069990:CDS
TGAAAATGCAAGCCAATACT+TGG 0.393326 7_2:+65836899 None:intergenic
ACTGGTTCAAGGAAAGAGTT+TGG 0.394703 7_2:-65837425 Msa1069990:intron
ATTGTGGTTTATAACTCTCT+TGG 0.398651 7_2:-65837291 Msa1069990:CDS
AAAGACCTGAATAGAATTGT+TGG 0.398724 7_2:+65841462 None:intergenic
TTCGTCATCACTGGCTTGCT+TGG 0.400499 7_2:-65837693 Msa1069990:CDS
TGGGAAGCTCAATGTTCATC+TGG 0.400751 7_2:-65841545 Msa1069990:CDS
ACTTCACAGGGTATAGTCTC+TGG 0.400799 7_2:-65841565 Msa1069990:CDS
CTCTATTGGCTGATAAGAAC+AGG 0.401356 7_2:-65841315 Msa1069990:CDS
TTCTATAATAATATTTCCCT+TGG 0.402828 7_2:+65834052 None:intergenic
CAATCGTTTAGCATAATCAT+TGG 0.411610 7_2:+65837829 None:intergenic
AGTCATGAAAAGTCTTCAAT+AGG 0.411948 7_2:-65836685 Msa1069990:CDS
CCTCCGGTTTACGTGGGAAA+AGG 0.413149 7_2:-65832253 Msa1069990:three_prime_UTR
AATCAGTCCATGGATATATC+AGG 0.417104 7_2:-65836059 Msa1069990:intron
AAAGTGGAGAATATATTTCC+TGG 0.425358 7_2:+65833986 None:intergenic
GTTTGGACATTCTGCTGTGC+AGG 0.429270 7_2:-65840424 Msa1069990:CDS
CTGGAAATGGAGGTGTTTCA+AGG 0.431524 7_2:-65832546 Msa1069990:CDS
CATCGTTTACCTTCTTTCCT+GGG 0.431615 7_2:+65833250 None:intergenic
GGTTGGCAAATTGACCCGTT+TGG 0.434705 7_2:-65840441 Msa1069990:CDS
GAAGGAGGTTCATAGTTCTC+AGG 0.436622 7_2:+65840023 None:intergenic
TGAGTTACCTTTACTATTCA+GGG 0.438695 7_2:-65836398 Msa1069990:CDS
AGAAGAGTCTTGAGGTTGTC+TGG 0.440236 7_2:-65840237 Msa1069990:CDS
GTAGAAGGGTCCTCTGGAAA+TGG 0.445460 7_2:-65832559 Msa1069990:CDS
TGAACAATAGTTGAAAATCA+AGG 0.446530 7_2:+65832078 None:intergenic
TCCTGCAACAGAAGTTGAAC+TGG 0.448308 7_2:-65837443 Msa1069990:CDS
GGGTAATAATTTCCAGCAAC+GGG 0.449669 7_2:+65835319 None:intergenic
TTTACGTGGGAAAAGGGCTA+TGG 0.451843 7_2:-65832246 Msa1069990:three_prime_UTR
TATGCTAAACGATTGGCAAT+AGG 0.452324 7_2:-65837821 Msa1069990:CDS
ACTCCATCTTCAATAGGTAT+AGG 0.454189 7_2:+65835692 None:intergenic
AAACATTTGCAGGTTATTGA+TGG 0.459153 7_2:-65837050 Msa1069990:intron
CATAGAAGAGTATTCCCAAA+AGG 0.460786 7_2:+65841617 None:intergenic
GCTTATATCTTCCGTCCAAA+TGG 0.464533 7_2:-65836242 Msa1069990:CDS
AATCACATAATGTGGACAAT+GGG 0.466986 7_2:-65838560 Msa1069990:CDS
TAATTTCTGTAACAGAATGC+TGG 0.468169 7_2:-65836266 Msa1069990:intron
TTACCATATTCAGGTTATTG+TGG 0.471363 7_2:-65837307 Msa1069990:intron
TATCAACTGAGATATGTTCA+TGG 0.471606 7_2:-65832134 Msa1069990:three_prime_UTR
TGTCCTTTCAGATTAATCTT+GGG 0.474577 7_2:-65835046 Msa1069990:intron
ATAACTCTCTTGGTTGGAAG+AGG 0.474966 7_2:-65837281 Msa1069990:CDS
GAGCCTCGGCTCATCTGCTC+AGG 0.475065 7_2:-65840203 Msa1069990:intron
ATAAGCTTGTTTAAAAGGCA+AGG 0.476872 7_2:+65832390 None:intergenic
CATCCAAGACACCCAAGTAT+TGG 0.478995 7_2:-65836911 Msa1069990:CDS
CTTCCAAGTCCCAGTCTGTT+CGG 0.479257 7_2:+65835350 None:intergenic
GGAACTGGTTTCGTCATCAC+TGG 0.480083 7_2:-65837702 Msa1069990:CDS
CTTGTTGAAACTTTATAACT+GGG 0.480817 7_2:+65837639 None:intergenic
AATTTGTCCATCTTCTAAGC+TGG 0.482237 7_2:+65834962 None:intergenic
AGAATCTCAAATTCTACCTC+TGG 0.484241 7_2:-65836991 Msa1069990:CDS
AACTGTGGAGCTTGCTCCAA+TGG 0.484793 7_2:-65832497 Msa1069990:CDS
TAAAGACATTACGACATGTA+AGG 0.485293 7_2:+65832155 None:intergenic
CGTGCCAATGGTTTCTGGAC+AGG 0.485426 7_2:-65838132 Msa1069990:CDS
AAGAAATCGTCAGTCTTGAT+TGG 0.489756 7_2:+65838268 None:intergenic
TCGATTAGCGCATTTATATG+AGG 0.491558 7_2:-65833490 Msa1069990:intron
TATGGTGTATAACACTTCAC+AGG 0.492293 7_2:-65841578 Msa1069990:CDS
AGATTCTATTTCTACACCGT+TGG 0.493375 7_2:+65837007 None:intergenic
ACAGAAGTTGAACTGGTTCA+AGG 0.495501 7_2:-65837436 Msa1069990:CDS
CCATTTAGCTCCCTCACCCA+AGG 0.497452 7_2:+65834023 None:intergenic
GTAAAAGTGCGGATTTCCAT+TGG 0.501131 7_2:+65832481 None:intergenic
TACCAGACAGTACAAAGAAA+AGG 0.505652 7_2:-65835926 Msa1069990:CDS
AATAATTTCCAGCAACGGGC+TGG 0.505914 7_2:+65835323 None:intergenic
CTGACATATCGTTTCAAAGC+TGG 0.506857 7_2:+65838093 None:intergenic
CTCCGGTTTACGTGGGAAAA+GGG 0.506978 7_2:-65832252 Msa1069990:three_prime_UTR
ATCCTGAAAATGTTGTTACA+TGG 0.508095 7_2:+65833826 None:intergenic
CTACCGAACAGACTGGGACT+TGG 0.508692 7_2:-65835353 Msa1069990:CDS
CTGTGCCGGTGACTGCATCA+TGG 0.509159 7_2:+65837867 None:intergenic
TCGTTTCAAAGCTGGCCTGC+TGG 0.511493 7_2:+65838101 None:intergenic
TTTGGAGGGCGAAAGAACTC+AGG 0.511623 7_2:-65837935 Msa1069990:CDS
CAATACTTGGGTGTCTTGGA+TGG 0.512823 7_2:+65836912 None:intergenic
GAACAGGAAATTTATCTATG+TGG 0.515196 7_2:-65841299 Msa1069990:CDS
ATCAACTGAGATATGTTCAT+GGG 0.515533 7_2:-65832133 Msa1069990:three_prime_UTR
TGCACAGCAGAATGTCCAAA+CGG 0.521779 7_2:+65840426 None:intergenic
TGATGCACTTCATCTAGTAT+TGG 0.525893 7_2:+65836085 None:intergenic
TCGGAAAAGGCTAACAAAAG+TGG 0.525918 7_2:+65833970 None:intergenic
GGCTTGTGTTCAAAATGTGT+TGG 0.526742 7_2:-65841353 Msa1069990:CDS
TCTACAAAGCATCTAAAAGA+TGG 0.527751 7_2:+65832437 None:intergenic
CTATGGGTTCCACCTAAGAA+TGG 0.532873 7_2:-65832229 Msa1069990:three_prime_UTR
TATTATAGAATAGACCCCTT+GGG 0.533906 7_2:-65834039 Msa1069990:CDS
TAGAATAGACCCCTTGGGTG+AGG 0.534403 7_2:-65834034 Msa1069990:CDS
AAGCGTATAAACTGATGATC+TGG 0.534771 7_2:+65836711 None:intergenic
AAGCCAATACTTGGGTGTCT+TGG 0.535952 7_2:+65836908 None:intergenic
TGGTTTATAACTCTCTTGGT+TGG 0.536231 7_2:-65837287 Msa1069990:CDS
TGGAAATGGAGGTGTTTCAA+GGG 0.538242 7_2:-65832545 Msa1069990:CDS
AAATCACATAATGTGGACAA+TGG 0.538385 7_2:-65838561 Msa1069990:CDS
CATTTAGCTCCCTCACCCAA+GGG 0.538619 7_2:+65834024 None:intergenic
CATTATACCCTGAATAGTAA+AGG 0.540784 7_2:+65836391 None:intergenic
ATATTTCCTGGCCAAAAGTA+CGG 0.540811 7_2:+65833998 None:intergenic
TGGAAAGTAGAAGGGTCCTC+TGG 0.542542 7_2:-65832565 Msa1069990:CDS
TCCTGAAAATGTTGTTACAT+GGG 0.545787 7_2:+65833827 None:intergenic
ACTGTTGATCAGTACTATGT+TGG 0.549819 7_2:-65841487 Msa1069990:CDS
ATTTGACTCCAAGAATTGGT+TGG 0.549978 7_2:-65840458 Msa1069990:CDS
GCACAGCAGAATGTCCAAAC+GGG 0.551546 7_2:+65840427 None:intergenic
TGGACACCGATTTCTGAAAG+AGG 0.552492 7_2:-65840487 Msa1069990:CDS
GACATTACGACATGTAAGGT+TGG 0.553188 7_2:+65832159 None:intergenic
ATAGAAGAGTATTCCCAAAA+GGG 0.554641 7_2:+65841618 None:intergenic
TCTTATAAACCATGAAAGAC+AGG 0.555377 7_2:-65836213 Msa1069990:intron
TGGGTAATAATTTCCAGCAA+CGG 0.556408 7_2:+65835318 None:intergenic
GGACAGGATACTTTACCAGC+AGG 0.557866 7_2:-65838116 Msa1069990:CDS
TAAGATGTGTTCCATTTGGA+CGG 0.558123 7_2:+65836231 None:intergenic
TCAAATTCTACCTCTGGCTG+AGG 0.558671 7_2:-65836985 Msa1069990:CDS
CAATGATTATGCTAAACGAT+TGG 0.559018 7_2:-65837828 Msa1069990:CDS
GTGTAAGTGCTAAAACCAAA+TGG 0.559441 7_2:+65836864 None:intergenic
TACGTGACTACCGAACAGAC+TGG 0.559525 7_2:-65835360 Msa1069990:CDS
AACTCTTCACACCCCAGAAG+CGG 0.559550 7_2:+65841697 None:intergenic
AGTTATTCAGATCGTGCCAA+TGG 0.560579 7_2:-65838144 Msa1069990:CDS
GTTCCAGTGACTGTTCTCCA+TGG 0.560750 7_2:-65836109 Msa1069990:CDS
TTATTATAGAATAGACCCCT+TGG 0.561110 7_2:-65834040 Msa1069990:CDS
GGTCCTATACCTATTGAAGA+TGG 0.564137 7_2:-65835695 Msa1069990:CDS
AGTCTTGAGGTTGTCTGGCA+AGG 0.565453 7_2:-65840232 Msa1069990:CDS
CTTCACAGGGTATAGTCTCT+GGG 0.565912 7_2:-65841564 Msa1069990:CDS
AAATTGAGTTGATGCTCCAC+AGG 0.566687 7_2:-65834944 Msa1069990:intron
ACCTTTCAGGAACTTGATCA+CGG 0.566998 7_2:-65833525 Msa1069990:intron
GGAGGATCCAGCTTAGAAGA+TGG 0.568313 7_2:-65834969 Msa1069990:CDS
TTACGTGGGAAAAGGGCTAT+GGG 0.568630 7_2:-65832245 Msa1069990:three_prime_UTR
GGTCCATGGAGAACAGTCAC+TGG 0.569176 7_2:+65836106 None:intergenic
ATGATTGATCAGACTACACT+TGG 0.569418 7_2:-65840507 Msa1069990:CDS
TCAGACTTTACAACTATGAC+AGG 0.569449 7_2:+65832356 None:intergenic
AGTATCAATACGCACATACA+TGG 0.569841 7_2:-65838526 Msa1069990:CDS
AAGGAGGTTCATAGTTCTCA+GGG 0.570158 7_2:+65840024 None:intergenic
CGTATAAACTGATGATCTGG+TGG 0.570270 7_2:+65836714 None:intergenic
ATACCTATTGAAGATGGAGT+TGG 0.572453 7_2:-65835689 Msa1069990:CDS
AGAATAGACCCCTTGGGTGA+GGG 0.574887 7_2:-65834033 Msa1069990:CDS
GCTTATCCGCAAATCAAGAA+AGG 0.577150 7_2:-65832615 Msa1069990:CDS
ACGATTGGCAATAGGCTACA+AGG 0.579394 7_2:-65837813 Msa1069990:CDS
GAAAAGTCTTCAATAGGTCA+AGG 0.580083 7_2:-65836679 Msa1069990:CDS
CTCGGACAAATCACATAATG+TGG 0.581640 7_2:-65838568 Msa1069990:CDS
CATATAAATGCGCTAATCGA+AGG 0.582611 7_2:+65833493 None:intergenic
CCTTTCAGGAACTTGATCAC+GGG 0.583752 7_2:-65833524 Msa1069990:intron
GACTTGTTTGGAAAGTAGAA+GGG 0.584116 7_2:-65832573 Msa1069990:CDS
GAATAAGCTTGTCCAACTGC+CGG 0.585174 7_2:+65838501 None:intergenic
GCTCATACTCATGATGATGT+TGG 0.588207 7_2:-65841520 Msa1069990:CDS
CAACACCATGATGCAGTCAC+CGG 0.591654 7_2:-65837872 Msa1069990:CDS
TGCATCAACGAATCAGTCCA+TGG 0.592263 7_2:-65836069 Msa1069990:CDS
ACATACATGGTACCGGCAGT+TGG 0.593412 7_2:-65838513 Msa1069990:CDS
CTTCATCTAGTATTGGTCCA+TGG 0.596258 7_2:+65836092 None:intergenic
TTGGGAATACTCTTCTATGG+AGG 0.597702 7_2:-65841613 Msa1069990:CDS
TTTGCATCTGTATATATGGA+TGG 0.598264 7_2:+65838313 None:intergenic
GGTAGGATGATAAAGATGAC+TGG 0.599141 7_2:-65833857 Msa1069990:intron
TAATAAGTTCCATTCTTAGG+TGG 0.600615 7_2:+65832220 None:intergenic
CAAAGCACCTGATATATCCA+TGG 0.601939 7_2:+65836052 None:intergenic
GAAAGAAGAGTACTTCCACT+TGG 0.605700 7_2:+65841775 None:intergenic
AAATCAAGAAAGGACAGAGA+TGG 0.611607 7_2:-65832605 Msa1069990:CDS
TTATGTTAATGCAAGAAACA+TGG 0.614150 7_2:-65836611 Msa1069990:intron
CCTAAGAAACTACTATGTCA+AGG 0.616978 7_2:-65836952 Msa1069990:CDS
ACGTGACTACCGAACAGACT+GGG 0.619461 7_2:-65835359 Msa1069990:CDS
GCTTATTCATTATGTGAACA+AGG 0.621281 7_2:-65838486 Msa1069990:intron
TTGGAGGGCGAAAGAACTCA+GGG 0.623579 7_2:-65837934 Msa1069990:CDS
AATGGAGGTGTTTCAAGGGG+TGG 0.624066 7_2:-65832541 Msa1069990:CDS
GTATCCTGTCCAGAAACCAT+TGG 0.630216 7_2:+65838128 None:intergenic
AATACGCACATACATGGTAC+CGG 0.630385 7_2:-65838520 Msa1069990:CDS
GGAAATGGAGGTGTTTCAAG+GGG 0.630910 7_2:-65832544 Msa1069990:CDS
TCAAAGTAAAATCCAGAAGG+AGG 0.631190 7_2:+65840008 None:intergenic
GAAAATGCAAGCCAATACTT+GGG 0.635413 7_2:+65836900 None:intergenic
GAAGGGTCCTCTGGAAATGG+AGG 0.635637 7_2:-65832556 Msa1069990:CDS
TGCACAGATTGAAGAAGACA+AGG 0.636340 7_2:-65833313 Msa1069990:intron
CAAAGTAAATGGTAAAAGTG+CGG 0.638098 7_2:+65832470 None:intergenic
CACTGTGCATGATAACCAAG+TGG 0.640253 7_2:-65841790 Msa1069990:five_prime_UTR
CTGTGTTGCTGACAATTGCA+AGG 0.641022 7_2:-65834517 Msa1069990:CDS
ATACTCATGATGATGTTGGA+TGG 0.641633 7_2:-65841516 Msa1069990:CDS
ACTTCAAAGTAAAATCCAGA+AGG 0.641851 7_2:+65840005 None:intergenic
TGATTCTAGAGGTGTTGCAG+AGG 0.644318 7_2:-65834556 Msa1069990:CDS
TCACCTGAGCAGATGAGCCG+AGG 0.644564 7_2:+65840200 None:intergenic
TGAAACACCTCCATTTCCAG+AGG 0.645145 7_2:+65832549 None:intergenic
TTTAACCCTCCGGTTTACGT+GGG 0.647513 7_2:-65832259 Msa1069990:three_prime_UTR
TTTCCATGTCACAGAAACGG+TGG 0.650106 7_2:-65840570 Msa1069990:intron
TCTATCTGTAGTGACAAGTG+TGG 0.651260 7_2:-65833289 Msa1069990:CDS
CAATAAGTTATGTTCAAAAG+CGG 0.652336 7_2:+65837466 None:intergenic
CGGCACAGAAAAGCAGCATG+TGG 0.655410 7_2:-65837852 Msa1069990:CDS
TTGGTGGATAGAGCTATAGG+AGG 0.655512 7_2:-65834987 Msa1069990:CDS
TTGCTGCTTGATGATTCTAG+AGG 0.657332 7_2:-65834567 Msa1069990:CDS
AATATGCTGCAAATGAGTCG+TGG 0.663233 7_2:-65838291 Msa1069990:CDS
TTGGTAAAGAAGTTTCCACT+CGG 0.667704 7_2:-65835670 Msa1069990:CDS
GTTACAGTTCATGACTCCAA+CGG 0.668698 7_2:-65837023 Msa1069990:CDS
CATAGTAGTTGAAATCCGAG+TGG 0.668936 7_2:+65835655 None:intergenic
TCAACTGAGATATGTTCATG+GGG 0.672326 7_2:-65832132 Msa1069990:three_prime_UTR
TGGCAAGGTAGCAAGAGCCT+CGG 0.675303 7_2:-65840217 Msa1069990:CDS
TGTGTTGCTGACAATTGCAA+GGG 0.677060 7_2:-65834516 Msa1069990:CDS
ATTTAGCTCCCTCACCCAAG+GGG 0.678054 7_2:+65834025 None:intergenic
ATGGTGTATAACACTTCACA+GGG 0.680762 7_2:-65841577 Msa1069990:CDS
CGATATGTCAGATTAATGAG+TGG 0.680986 7_2:-65838081 Msa1069990:CDS
TCTACAAATACCTCAGCCAG+AGG 0.690237 7_2:+65836975 None:intergenic
TGGCATGTGTATGCATGATG+AGG 0.703361 7_2:-65840550 Msa1069990:CDS
TAAGTGCTAAAACCAAATGG+TGG 0.707183 7_2:+65836867 None:intergenic
TGATCCAAAAGAGCTAACTG+TGG 0.718341 7_2:-65832512 Msa1069990:CDS
ATTGGCAATAGGCTACAAGG+AGG 0.782057 7_2:-65837810 Msa1069990:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTGTTCTTTTTTATAAAATT+AGG + chr7_2:65832114-65832133 None:intergenic 10.0%
!!! AAAAGAATTATTTTTATCTA+AGG + chr7_2:65835714-65835733 None:intergenic 10.0%
!! TTAAATCATTGATATTATAA+AGG - chr7_2:65839402-65839421 Msa1069990:intron 10.0%
!! ATATTTATAATGCATAAAAA+AGG - chr7_2:65839461-65839480 Msa1069990:intron 10.0%
!!! TTCTGAAATTTTAAAAATTT+GGG + chr7_2:65840999-65841018 None:intergenic 10.0%
!!! TTCTTATCTTGTTTAATATT+CGG - chr7_2:65833493-65833512 Msa1069990:CDS 15.0%
!!! CTTTTTTTTTTTTTGTATTC+TGG - chr7_2:65834193-65834212 Msa1069990:intron 15.0%
!!! TGAACAATATATATGATTTT+TGG - chr7_2:65834344-65834363 Msa1069990:intron 15.0%
!!! CTTTTTACTTTTTTTATTGA+TGG - chr7_2:65834529-65834548 Msa1069990:CDS 15.0%
!! CTAGTTATTAAGAAAAAATA+TGG - chr7_2:65834772-65834791 Msa1069990:intron 15.0%
!! ACAAATAAAACATATCAATT+TGG - chr7_2:65834813-65834832 Msa1069990:intron 15.0%
!!! TTCTAAATAATTTTGAATGT+TGG - chr7_2:65834836-65834855 Msa1069990:intron 15.0%
!! TAAAAAAAAATGTACCAATT+TGG + chr7_2:65834948-65834967 None:intergenic 15.0%
!! ATAAATACATATTAAACTCA+CGG + chr7_2:65835876-65835895 None:intergenic 15.0%
!!! TTTTACAATAAATACTAGAA+TGG + chr7_2:65836893-65836912 None:intergenic 15.0%
!! ACACAAATGTAAATATAAAA+GGG + chr7_2:65838258-65838277 None:intergenic 15.0%
!! ATTATCTTCATATTTCTTAT+TGG - chr7_2:65838645-65838664 Msa1069990:intron 15.0%
!! AAGAAAGGAAAAAAAAAATA+AGG + chr7_2:65838886-65838905 None:intergenic 15.0%
!!! TTATTTTTTTTTTCCTTTCT+TGG - chr7_2:65838885-65838904 Msa1069990:intron 15.0%
!!! AAATAAATGATAACTGTTTT+TGG - chr7_2:65840439-65840458 Msa1069990:CDS 15.0%
!! ATGTAATAATGTTTAAATGT+TGG + chr7_2:65840465-65840484 None:intergenic 15.0%
!! AACATTTAAACATTATTACA+TGG - chr7_2:65840464-65840483 Msa1069990:CDS 15.0%
!!! CTTCTGAAATTTTAAAAATT+TGG + chr7_2:65841000-65841019 None:intergenic 15.0%
!!! TTGTGTTGATTGAAAATTAA+TGG - chr7_2:65832716-65832735 Msa1069990:intron 20.0%
!!! TTTTAATTTTGCAATGTGTA+GGG - chr7_2:65832741-65832760 Msa1069990:intron 20.0%
!! AATCAAAATGAAATCTTGTT+CGG + chr7_2:65833437-65833456 None:intergenic 20.0%
!!! TCTTATCTTGTTTAATATTC+GGG - chr7_2:65833494-65833513 Msa1069990:CDS 20.0%
!!! TAAAAAGCAAAGTATTTTGT+GGG + chr7_2:65834516-65834535 None:intergenic 20.0%
!!! TTACTTTTTTTATTGATGGT+TGG - chr7_2:65834533-65834552 Msa1069990:CDS 20.0%
!! AAATATACTATAGCAGAAAA+GGG + chr7_2:65834670-65834689 None:intergenic 20.0%
!! TAAATATACTATAGCAGAAA+AGG + chr7_2:65834671-65834690 None:intergenic 20.0%
!! AAAAAATATGGAGATCTATT+TGG - chr7_2:65834784-65834803 Msa1069990:intron 20.0%
!!! ATTGATATGTTTTATTTGTC+AGG + chr7_2:65834812-65834831 None:intergenic 20.0%
!!! CTTTCTTAAGATTGTTTTTA+GGG + chr7_2:65834893-65834912 None:intergenic 20.0%
!!! TCTTTCTTAAGATTGTTTTT+AGG + chr7_2:65834894-65834913 None:intergenic 20.0%
!!! TCCCTTATTATTTTATTTTC+AGG - chr7_2:65835517-65835536 Msa1069990:intron 20.0%
!! GCCTGAAAATAAAATAATAA+GGG + chr7_2:65835521-65835540 None:intergenic 20.0%
!! TGCCTGAAAATAAAATAATA+AGG + chr7_2:65835522-65835541 None:intergenic 20.0%
!!! ATATTTTGCATCTGTATATA+TGG + chr7_2:65835811-65835830 None:intergenic 20.0%
!! TAAATACATATTAAACTCAC+GGG + chr7_2:65835875-65835894 None:intergenic 20.0%
!!! TGGTATGTCATTTATATTTA+AGG - chr7_2:65836067-65836086 Msa1069990:CDS 20.0%
!!! TTTTATACCGATAAATTATC+AGG - chr7_2:65836139-65836158 Msa1069990:intron 20.0%
!! AGAAAATGAAAAAGTAAAGA+GGG + chr7_2:65836623-65836642 None:intergenic 20.0%
!! AAGAAAATGAAAAAGTAAAG+AGG + chr7_2:65836624-65836643 None:intergenic 20.0%
!! CACAAATGTAAATATAAAAG+GGG + chr7_2:65838257-65838276 None:intergenic 20.0%
!! GACACAAATGTAAATATAAA+AGG + chr7_2:65838259-65838278 None:intergenic 20.0%
!!! ACTGTTTGATTTTTCTTATA+TGG - chr7_2:65838343-65838362 Msa1069990:CDS 20.0%
!!! ATCTGTGTAAAAAGTTTTAT+TGG + chr7_2:65838492-65838511 None:intergenic 20.0%
!!! AAGTTGCATATTTTATCATA+TGG + chr7_2:65838962-65838981 None:intergenic 20.0%
!! ACTGTAAATTCAAGTATATT+TGG + chr7_2:65839249-65839268 None:intergenic 20.0%
!! TGAAAAGAAAATTCGAAATT+TGG + chr7_2:65839519-65839538 None:intergenic 20.0%
!!! TTTGTCATTTTTAGTGTATT+TGG - chr7_2:65839933-65839952 Msa1069990:intron 20.0%
!! TTCTATAATAATATTTCCCT+TGG + chr7_2:65840068-65840087 None:intergenic 20.0%
!! ACTAAAAGATCAACTTTATT+TGG - chr7_2:65840239-65840258 Msa1069990:CDS 20.0%
!!! GTTATAATAACAATGTTTTC+TGG + chr7_2:65840337-65840356 None:intergenic 20.0%
!!! CATTGTTATTATAACATTAC+AGG - chr7_2:65840342-65840361 Msa1069990:intron 20.0%
!! TTTAAACATTATTACATGGA+CGG - chr7_2:65840468-65840487 Msa1069990:CDS 20.0%
!! ATCAATTATCAGTGAAAATA+GGG + chr7_2:65840942-65840961 None:intergenic 20.0%
!! AATCAATTATCAGTGAAAAT+AGG + chr7_2:65840943-65840962 None:intergenic 20.0%
!!! ATATTTTCGGATTTAGAAAT+GGG + chr7_2:65840973-65840992 None:intergenic 20.0%
!! TAAATAGTACTTTAATAACG+TGG - chr7_2:65841171-65841190 Msa1069990:intron 20.0%
!! TTTGTGAATCAATGAAAATA+TGG - chr7_2:65841374-65841393 Msa1069990:intron 20.0%
!!! GAACAAGACTTAATTTTTTT+TGG + chr7_2:65841419-65841438 None:intergenic 20.0%
!!! ATTTCATAAGCTTGTTTAAA+AGG + chr7_2:65841735-65841754 None:intergenic 20.0%
!! AGGGTTAAAAAAAACATTTA+TGG + chr7_2:65841847-65841866 None:intergenic 20.0%
!! TTTTATCAGACATTTTGTGA+TGG + chr7_2:65832143-65832162 None:intergenic 25.0%
! TGCATAATATATGTAATGTC+CGG - chr7_2:65832208-65832227 Msa1069990:three_prime_UTR 25.0%
!!! ACAGGTGCTTTTTTTATTTT+TGG + chr7_2:65832253-65832272 None:intergenic 25.0%
!!! AGATGAATTTTTTCTCCATT+GGG + chr7_2:65832470-65832489 None:intergenic 25.0%
!!! AAGATGAATTTTTTCTCCAT+TGG + chr7_2:65832471-65832490 None:intergenic 25.0%
!! GGAGAAAAAATTCATCTTTT+TGG - chr7_2:65832473-65832492 Msa1069990:CDS 25.0%
!!! GTTTTAATTTTGCAATGTGT+AGG - chr7_2:65832740-65832759 Msa1069990:intron 25.0%
!!! TTTAATTTTGCAATGTGTAG+GGG - chr7_2:65832742-65832761 Msa1069990:intron 25.0%
! TCTCTATTGACCATATTTAT+TGG - chr7_2:65832884-65832903 Msa1069990:intron 25.0%
! ACACTTCAATCCAATAAATA+TGG + chr7_2:65832897-65832916 None:intergenic 25.0%
!!! ACTGAAAAAGTTGATTTGTT+TGG - chr7_2:65832949-65832968 Msa1069990:intron 25.0%
!!! CTGAAAAAGTTGATTTGTTT+GGG - chr7_2:65832950-65832969 Msa1069990:intron 25.0%
! TAACAAACAAAAAGAAACAG+TGG + chr7_2:65833074-65833093 None:intergenic 25.0%
! ACTTCTTAAATACACATTCA+TGG - chr7_2:65833107-65833126 Msa1069990:intron 25.0%
! ATTCTATGGTTGAAGATTTA+TGG + chr7_2:65833744-65833763 None:intergenic 25.0%
!!! ACAAAGTGTTTTGAGATAAT+TGG - chr7_2:65834369-65834388 Msa1069990:intron 25.0%
!!! GTAAAAAGCAAAGTATTTTG+TGG + chr7_2:65834517-65834536 None:intergenic 25.0%
!! TTTTTATAAAGACCAGTTTG+TGG - chr7_2:65834983-65835002 Msa1069990:CDS 25.0%
! TCAAAACAGATTAAACTACT+TGG + chr7_2:65835088-65835107 None:intergenic 25.0%
!! AAGTAGTTTAATCTGTTTTG+AGG - chr7_2:65835087-65835106 Msa1069990:intron 25.0%
!! TACTATCTGATAATGATAAC+CGG + chr7_2:65835198-65835217 None:intergenic 25.0%
! TATCATTATCAGATAGTAAG+TGG - chr7_2:65835200-65835219 Msa1069990:intron 25.0%
! ATATACATCACAAACTACAT+AGG - chr7_2:65835246-65835265 Msa1069990:intron 25.0%
!! AATTTAGAACCCTAATCAAA+GGG + chr7_2:65835664-65835683 None:intergenic 25.0%
!! TAATTTAGAACCCTAATCAA+AGG + chr7_2:65835665-65835684 None:intergenic 25.0%
! ATTAATGAGTGGCTATTATT+TGG - chr7_2:65836047-65836066 Msa1069990:intron 25.0%
! ATAATGTAATTGAAGTCTTG+AGG - chr7_2:65836102-65836121 Msa1069990:CDS 25.0%
! TAATGTAATTGAAGTCTTGA+GGG - chr7_2:65836103-65836122 Msa1069990:CDS 25.0%
! ACATACTAGTAATTGGATAT+AGG + chr7_2:65836366-65836385 None:intergenic 25.0%
! TTACATGACATACTAGTAAT+TGG + chr7_2:65836373-65836392 None:intergenic 25.0%
! CTTGTTGAAACTTTATAACT+GGG + chr7_2:65836481-65836500 None:intergenic 25.0%
!! ACTTGTTGAAACTTTATAAC+TGG + chr7_2:65836482-65836501 None:intergenic 25.0%
! ACTTAAAAGTTCAAGATTCA+AGG + chr7_2:65836511-65836530 None:intergenic 25.0%
! TTGAATGAATTGAAAGTGAA+GGG - chr7_2:65836539-65836558 Msa1069990:intron 25.0%
! AAAATGAAAAAGTAAAGAGG+GGG + chr7_2:65836621-65836640 None:intergenic 25.0%
! GAAAATGAAAAAGTAAAGAG+GGG + chr7_2:65836622-65836641 None:intergenic 25.0%
! CAATAAGTTATGTTCAAAAG+CGG + chr7_2:65836654-65836673 None:intergenic 25.0%
! TAAATATGAAACAAACCGAA+TGG + chr7_2:65836761-65836780 None:intergenic 25.0%
! AGTAGATAACGAATTATTTG+AGG + chr7_2:65837328-65837347 None:intergenic 25.0%
! AATGTTCATGTTATGAACAA+GGG + chr7_2:65837352-65837371 None:intergenic 25.0%
! GTTTCTTGCATTAACATAAT+TGG + chr7_2:65837505-65837524 None:intergenic 25.0%
! TTATGTTAATGCAAGAAACA+TGG - chr7_2:65837506-65837525 Msa1069990:intron 25.0%
!! TATCTTTGTTTCTTCATTTC+AGG - chr7_2:65837801-65837820 Msa1069990:intron 25.0%
! TTTATAAGATGTGTTCCATT+TGG + chr7_2:65837893-65837912 None:intergenic 25.0%
! GTAATCAGAATTTCTATGTA+GGG + chr7_2:65837957-65837976 None:intergenic 25.0%
! TGTAATCAGAATTTCTATGT+AGG + chr7_2:65837958-65837977 None:intergenic 25.0%
!! TTAAAAGTGATTGAGTTTTC+AGG - chr7_2:65837986-65838005 Msa1069990:intron 25.0%
! GTAAATATAAAAGGGGTAAT+TGG + chr7_2:65838250-65838269 None:intergenic 25.0%
! TCATTTGAACTAATGGTATT+TGG - chr7_2:65838388-65838407 Msa1069990:intron 25.0%
!! ACTTTTTACACAGATTCTAA+TGG - chr7_2:65838497-65838516 Msa1069990:CDS 25.0%
!! CTTTTTACACAGATTCTAAT+GGG - chr7_2:65838498-65838517 Msa1069990:CDS 25.0%
!! TGAGCTTTTATAGAACATTT+CGG - chr7_2:65838827-65838846 Msa1069990:intron 25.0%
!!! TTTTTTTTTTCCTTTCTTGG+AGG - chr7_2:65838888-65838907 Msa1069990:intron 25.0%
! AAATTATATCGTGAACCTAA+AGG + chr7_2:65839047-65839066 None:intergenic 25.0%
! TGAAGAATAAAATATACCTG+TGG + chr7_2:65839192-65839211 None:intergenic 25.0%
!! GGTATATTTTATTCTTCATG+CGG - chr7_2:65839194-65839213 Msa1069990:intron 25.0%
!!! TGTCTTGTTTCTTAAAAATG+TGG - chr7_2:65839296-65839315 Msa1069990:intron 25.0%
!!! CACTATTTGTTTTTCAAAGT+CGG + chr7_2:65839648-65839667 None:intergenic 25.0%
! ATTGGTTATAAATTGTTGCT+TGG - chr7_2:65839707-65839726 Msa1069990:intron 25.0%
!! ACCAATTTTCAATTACATTG+AGG - chr7_2:65839833-65839852 Msa1069990:CDS 25.0%
!! GGAGTAAATTCATCTTTTTA+AGG + chr7_2:65839859-65839878 None:intergenic 25.0%
!!! TCATTTTTAGTGTATTTGGT+TGG - chr7_2:65839937-65839956 Msa1069990:intron 25.0%
!!! GTCAATTAATTTTGGAAGTT+TGG - chr7_2:65840010-65840029 Msa1069990:CDS 25.0%
!! AAAGATCAACTTTATTTGGT+AGG - chr7_2:65840243-65840262 Msa1069990:CDS 25.0%
! TCTATCCATTGCTTAAATAT+TGG - chr7_2:65840375-65840394 Msa1069990:intron 25.0%
! AATAACACTATAGGGAATAA+TGG + chr7_2:65840405-65840424 None:intergenic 25.0%
! ACTGAACTAATAACACTATA+GGG + chr7_2:65840413-65840432 None:intergenic 25.0%
! TACTGAACTAATAACACTAT+AGG + chr7_2:65840414-65840433 None:intergenic 25.0%
!! TATTTTCGGATTTAGAAATG+GGG + chr7_2:65840972-65840991 None:intergenic 25.0%
!! CATATTTTCGGATTTAGAAA+TGG + chr7_2:65840974-65840993 None:intergenic 25.0%
! CATTTCTAAATCCGAAAATA+TGG - chr7_2:65840972-65840991 Msa1069990:intron 25.0%
!!! AAAATTTGGGACCATATTTT+CGG + chr7_2:65840986-65841005 None:intergenic 25.0%
!! ATGCTTATTTCTTTAGAAGT+AGG - chr7_2:65841109-65841128 Msa1069990:intron 25.0%
!! TGCTTATTTCTTTAGAAGTA+GGG - chr7_2:65841110-65841129 Msa1069990:intron 25.0%
! GTTACTACTATCAAAGTAAA+TGG + chr7_2:65841661-65841680 None:intergenic 25.0%
! GCAAAATATCCAAGAATTAA+AGG + chr7_2:65841789-65841808 None:intergenic 25.0%
!!! AAATGTTTTTTTTAACCCTC+CGG - chr7_2:65841848-65841867 Msa1069990:intron 25.0%
!!! GCTTTTTTTATTTTTGGTGG+TGG + chr7_2:65832247-65832266 None:intergenic 30.0%
!!! GGTGCTTTTTTTATTTTTGG+TGG + chr7_2:65832250-65832269 None:intergenic 30.0%
!! ATAGAAGAGTATTCCCAAAA+GGG + chr7_2:65832502-65832521 None:intergenic 30.0%
AAAGACCTGAATAGAATTGT+TGG + chr7_2:65832658-65832677 None:intergenic 30.0%
! TTAATTTTGCAATGTGTAGG+GGG - chr7_2:65832743-65832762 Msa1069990:intron 30.0%
TCAAAATGTGTTGGATTCTA+TGG - chr7_2:65832773-65832792 Msa1069990:intron 30.0%
GAACAGGAAATTTATCTATG+TGG - chr7_2:65832818-65832837 Msa1069990:intron 30.0%
ATGGAAAGCAAATTGAATCT+TGG + chr7_2:65832996-65833015 None:intergenic 30.0%
CAATTGATCTAAGCTATCTA+TGG + chr7_2:65833136-65833155 None:intergenic 30.0%
! TTGATTTGATCCCAAAATTC+AGG - chr7_2:65833153-65833172 Msa1069990:intron 30.0%
TGATTTGATCCCAAAATTCA+GGG - chr7_2:65833154-65833173 Msa1069990:intron 30.0%
! TATACAGATCCCTGAATTTT+GGG + chr7_2:65833166-65833185 None:intergenic 30.0%
TCACATGTAAAATGGACATA+TGG + chr7_2:65833301-65833320 None:intergenic 30.0%
!!! TTTTTTCCATGTCACAGAAA+CGG - chr7_2:65833544-65833563 Msa1069990:intron 30.0%
ATGTTAAGCACAAGATTCTA+TGG + chr7_2:65833758-65833777 None:intergenic 30.0%
!! TTGATTCACTTTTCTTTGGT+AGG - chr7_2:65833823-65833842 Msa1069990:CDS 30.0%
! TTTTGCGTTTATTCCTATCT+TGG + chr7_2:65833857-65833876 None:intergenic 30.0%
AGATAGGAATAAACGCAAAA+AGG - chr7_2:65833857-65833876 Msa1069990:intron 30.0%
!!! CCTTATTTTTTCACCATGAT+CGG - chr7_2:65833987-65834006 Msa1069990:CDS 30.0%
ACTTCAAAGTAAAATCCAGA+AGG + chr7_2:65834115-65834134 None:intergenic 30.0%
AAAATTCTCCATTCTATCGT+GGG + chr7_2:65834491-65834510 None:intergenic 30.0%
!! CAACACCTATTTCTTTTATG+GGG + chr7_2:65834559-65834578 None:intergenic 30.0%
!! GCAACACCTATTTCTTTTAT+GGG + chr7_2:65834560-65834579 None:intergenic 30.0%
!! AGCAACACCTATTTCTTTTA+TGG + chr7_2:65834561-65834580 None:intergenic 30.0%
! GACTGAATTTGACATTTTTG+AGG - chr7_2:65834921-65834940 Msa1069990:intron 30.0%
!! GAGAGATTTTGTTTATGACA+TGG - chr7_2:65835046-65835065 Msa1069990:intron 30.0%
! GATTAAACTACTTGGTGAAA+AGG + chr7_2:65835080-65835099 None:intergenic 30.0%
TTCACTACCAGTAAGAAAAA+TGG - chr7_2:65835152-65835171 Msa1069990:intron 30.0%
TCTACTATTTCAGTTTGAAG+TGG - chr7_2:65835452-65835471 Msa1069990:intron 30.0%
!! ATTTTCAGGCAAACATAACT+CGG - chr7_2:65835531-65835550 Msa1069990:intron 30.0%
AAATCACATAATGTGGACAA+TGG - chr7_2:65835556-65835575 Msa1069990:intron 30.0%
AATCACATAATGTGGACAAT+GGG - chr7_2:65835557-65835576 Msa1069990:intron 30.0%
GCTTATTCATTATGTGAACA+AGG - chr7_2:65835631-65835650 Msa1069990:CDS 30.0%
! ATTTAGAACCCTAATCAAAG+GGG + chr7_2:65835663-65835682 None:intergenic 30.0%
TTTGCATCTGTATATATGGA+TGG + chr7_2:65835807-65835826 None:intergenic 30.0%
! GGTTTTTCATGCAAATAAGA+GGG + chr7_2:65835952-65835971 None:intergenic 30.0%
! GCAAGACAGTTAGAATATTT+TGG - chr7_2:65836164-65836183 Msa1069990:intron 30.0%
!! AGACAGTTAGAATATTTTGG+AGG - chr7_2:65836167-65836186 Msa1069990:intron 30.0%
!! GACAGTTAGAATATTTTGGA+GGG - chr7_2:65836168-65836187 Msa1069990:intron 30.0%
CAATCGTTTAGCATAATCAT+TGG + chr7_2:65836291-65836310 None:intergenic 30.0%
CAATGATTATGCTAAACGAT+TGG - chr7_2:65836289-65836308 Msa1069990:intron 30.0%
TGTAATGATATTCTTTGTGC+AGG - chr7_2:65836388-65836407 Msa1069990:CDS 30.0%
CTTGAATGAATTGAAAGTGA+AGG - chr7_2:65836538-65836557 Msa1069990:intron 30.0%
TGAATGAATTGAAAGTGAAG+GGG - chr7_2:65836540-65836559 Msa1069990:intron 30.0%
!!! TGTTCTCTTTTTCAACCATT+CGG - chr7_2:65836743-65836762 Msa1069990:intron 30.0%
! TTACCATATTCAGGTTATTG+TGG - chr7_2:65836810-65836829 Msa1069990:intron 30.0%
AAACCACAATAACCTGAATA+TGG + chr7_2:65836816-65836835 None:intergenic 30.0%
ATTGTGGTTTATAACTCTCT+TGG - chr7_2:65836826-65836845 Msa1069990:intron 30.0%
CTTATATAAACACTCGTAGT+TGG + chr7_2:65837026-65837045 None:intergenic 30.0%
AAACATTTGCAGGTTATTGA+TGG - chr7_2:65837067-65837086 Msa1069990:intron 30.0%
TACTATGTCAAGGCATATTT+AGG - chr7_2:65837175-65837194 Msa1069990:intron 30.0%
CAATGTTCATGTTATGAACA+AGG + chr7_2:65837353-65837372 None:intergenic 30.0%
!! AATGTTTTCTGCTTGTTTTC+AGG - chr7_2:65837378-65837397 Msa1069990:intron 30.0%
AGTCATGAAAAGTCTTCAAT+AGG - chr7_2:65837432-65837451 Msa1069990:CDS 30.0%
AAAATGATAAACACGTGTGA+TGG + chr7_2:65837579-65837598 None:intergenic 30.0%
! TTTTTATCCAACAGTGTAAG+AGG + chr7_2:65837641-65837660 None:intergenic 30.0%
TGAGTTACCTTTACTATTCA+GGG - chr7_2:65837719-65837738 Msa1069990:intron 30.0%
CATTATACCCTGAATAGTAA+AGG + chr7_2:65837729-65837748 None:intergenic 30.0%
CTTTACTATTCAGGGTATAA+TGG - chr7_2:65837727-65837746 Msa1069990:intron 30.0%
TAATTTCTGTAACAGAATGC+TGG - chr7_2:65837851-65837870 Msa1069990:CDS 30.0%
TCTTATAAACCATGAAAGAC+AGG - chr7_2:65837904-65837923 Msa1069990:CDS 30.0%
TGCTGAATCATTTGAACTAA+TGG - chr7_2:65838381-65838400 Msa1069990:intron 30.0%
! CTAATGGTATTTGGAATGTT+AGG - chr7_2:65838397-65838416 Msa1069990:intron 30.0%
TAATGAAATGCAGTATTGCA+AGG + chr7_2:65838563-65838582 None:intergenic 30.0%
!! ATTCATTTTTCTCTGCTCTA+GGG - chr7_2:65838697-65838716 Msa1069990:intron 30.0%
TCTATAAAAGCTCACTTACT+GGG + chr7_2:65838821-65838840 None:intergenic 30.0%
TTCTATAAAAGCTCACTTAC+TGG + chr7_2:65838822-65838841 None:intergenic 30.0%
TGCAGTTATATCAATCCTTT+AGG - chr7_2:65839029-65839048 Msa1069990:intron 30.0%
TTGTCCTTTCAGATTAATCT+TGG - chr7_2:65839070-65839089 Msa1069990:intron 30.0%
TGTCCTTTCAGATTAATCTT+GGG - chr7_2:65839071-65839090 Msa1069990:intron 30.0%
TATCCCAAGATTAATCTGAA+AGG + chr7_2:65839077-65839096 None:intergenic 30.0%
! TAAGACAGAATTCTCAGTTT+TGG - chr7_2:65839111-65839130 Msa1069990:intron 30.0%
CTCTAAATAGATTGCTAATC+AGG - chr7_2:65839219-65839238 Msa1069990:intron 30.0%
GTTAACCATATATGCCAAAA+GGG + chr7_2:65839322-65839341 None:intergenic 30.0%
TGTTAACCATATATGCCAAA+AGG + chr7_2:65839323-65839342 None:intergenic 30.0%
! CGAATTTTCTTTTCACCAAT+AGG - chr7_2:65839524-65839543 Msa1069990:intron 30.0%
AACACAGTCTGTTTCATTTA+AGG + chr7_2:65839587-65839606 None:intergenic 30.0%
! CGACTTTGAAAAACAAATAG+TGG - chr7_2:65839646-65839665 Msa1069990:intron 30.0%
GCGATGTCATATGTATATAT+TGG - chr7_2:65839689-65839708 Msa1069990:intron 30.0%
AAATTATGACCTTGACACTT+TGG + chr7_2:65839771-65839790 None:intergenic 30.0%
! AAAGTGTCAAGGTCATAATT+TGG - chr7_2:65839770-65839789 Msa1069990:intron 30.0%
GCCTCAATGTAATTGAAAAT+TGG + chr7_2:65839837-65839856 None:intergenic 30.0%
! GACATTTTTCCAGCATAAAT+CGG + chr7_2:65839982-65840001 None:intergenic 30.0%
! ACTGCTGTGTCAATTAATTT+TGG - chr7_2:65840002-65840021 Msa1069990:CDS 30.0%
!!! GCTTTTTCTACTTATTTTGC+AGG - chr7_2:65840041-65840060 Msa1069990:CDS 30.0%
TTATTATAGAATAGACCCCT+TGG - chr7_2:65840077-65840096 Msa1069990:intron 30.0%
TATTATAGAATAGACCCCTT+GGG - chr7_2:65840078-65840097 Msa1069990:intron 30.0%
AAAGTGGAGAATATATTTCC+TGG + chr7_2:65840134-65840153 None:intergenic 30.0%
! ATGCATGTAATTCACCTTTT+CGG + chr7_2:65840169-65840188 None:intergenic 30.0%
TCCTGAAAATGTTGTTACAT+GGG + chr7_2:65840293-65840312 None:intergenic 30.0%
ATCCTGAAAATGTTGTTACA+TGG + chr7_2:65840294-65840313 None:intergenic 30.0%
GAAAGCCAATATTTAAGCAA+TGG + chr7_2:65840383-65840402 None:intergenic 30.0%
! AGCTTCTAACTATCTTTTCT+TGG - chr7_2:65840569-65840588 Msa1069990:intron 30.0%
AATCTGTGCATGAATTTGAT+TGG + chr7_2:65840794-65840813 None:intergenic 30.0%
AGAATAAGTCTCATATTCAG+TGG + chr7_2:65841029-65841048 None:intergenic 30.0%
TTACAGCTCATTATTCAACT+TGG + chr7_2:65841069-65841088 None:intergenic 30.0%
GTGATGTGACATTACATATA+TGG + chr7_2:65841220-65841239 None:intergenic 30.0%
!! GTATAAAAAAGCGTCGAATT+CGG - chr7_2:65841278-65841297 Msa1069990:intron 30.0%
!!! TTTTGGCTTAAATGCACTAT+CGG + chr7_2:65841402-65841421 None:intergenic 30.0%
ACTTCTTTGATCTAATACCA+AGG + chr7_2:65841471-65841490 None:intergenic 30.0%
CAAAGTAAATGGTAAAAGTG+CGG + chr7_2:65841650-65841669 None:intergenic 30.0%
! TCTACAAAGCATCTAAAAGA+TGG + chr7_2:65841683-65841702 None:intergenic 30.0%
! ATAAGCTTGTTTAAAAGGCA+AGG + chr7_2:65841730-65841749 None:intergenic 30.0%
!! TTTTGGAGGAGTTAAAGATA+TGG + chr7_2:65841818-65841837 None:intergenic 30.0%
! AACATTTATGGAAGCTGTTT+TGG + chr7_2:65841835-65841854 None:intergenic 30.0%
TAATAAGTTCCATTCTTAGG+TGG + chr7_2:65841900-65841919 None:intergenic 30.0%
ACCTAAGAATGGAACTTATT+AGG - chr7_2:65841899-65841918 Msa1069990:intron 30.0%
ACCTAATAAGTTCCATTCTT+AGG + chr7_2:65841903-65841922 None:intergenic 30.0%
CTGAATAAGTGAGTAATTTG+AGG - chr7_2:65841927-65841946 Msa1069990:intron 30.0%
TAAAGACATTACGACATGTA+AGG + chr7_2:65841965-65841984 None:intergenic 30.0%
TATCAACTGAGATATGTTCA+TGG - chr7_2:65841983-65842002 Msa1069990:five_prime_UTR 30.0%
ATCAACTGAGATATGTTCAT+GGG - chr7_2:65841984-65842003 Msa1069990:five_prime_UTR 30.0%
!!! TTTTTATTTTTGGTGGTGGC+CGG + chr7_2:65832243-65832262 None:intergenic 35.0%
!! ATCTTTTTGGTGACCCTTTT+GGG - chr7_2:65832486-65832505 Msa1069990:CDS 35.0%
!! CATAGAAGAGTATTCCCAAA+AGG + chr7_2:65832503-65832522 None:intergenic 35.0%
!! CTTTTGGGAATACTCTTCTA+TGG - chr7_2:65832501-65832520 Msa1069990:CDS 35.0%
TGGAGGAGAATCAAAGTTTA+TGG - chr7_2:65832521-65832540 Msa1069990:CDS 35.0%
TATGGTGTATAACACTTCAC+AGG - chr7_2:65832539-65832558 Msa1069990:CDS 35.0%
ATGGTGTATAACACTTCACA+GGG - chr7_2:65832540-65832559 Msa1069990:CDS 35.0%
! ATACTCATGATGATGTTGGA+TGG - chr7_2:65832601-65832620 Msa1069990:CDS 35.0%
ACTGTTGATCAGTACTATGT+TGG - chr7_2:65832630-65832649 Msa1069990:CDS 35.0%
TGGTTCCAACAATTCTATTC+AGG - chr7_2:65832650-65832669 Msa1069990:intron 35.0%
TTCTATGGTTCATGCTCTAT+TGG - chr7_2:65832788-65832807 Msa1069990:intron 35.0%
! GTATACAGATCCCTGAATTT+TGG + chr7_2:65833167-65833186 None:intergenic 35.0%
GTACTTGAGAAACATACACT+TGG + chr7_2:65833255-65833274 None:intergenic 35.0%
!! AGTTAAGCAGCTTGTTAGTT+CGG - chr7_2:65833382-65833401 Msa1069990:intron 35.0%
ATAACCCTCACAAACATGAA+GGG + chr7_2:65833472-65833491 None:intergenic 35.0%
TATAACCCTCACAAACATGA+AGG + chr7_2:65833473-65833492 None:intergenic 35.0%
ATGATTGATCAGACTACACT+TGG - chr7_2:65833610-65833629 Msa1069990:intron 35.0%
! TTCGATTTGACTCCAAGAAT+TGG - chr7_2:65833655-65833674 Msa1069990:intron 35.0%
ATTTGACTCCAAGAATTGGT+TGG - chr7_2:65833659-65833678 Msa1069990:intron 35.0%
TCAATTTGCCAACCAATTCT+TGG + chr7_2:65833670-65833689 None:intergenic 35.0%
AACTGTCATAAGTACTATGC+AGG - chr7_2:65833794-65833813 Msa1069990:CDS 35.0%
!! GGCTTTGATTCACTTTTCTT+TGG - chr7_2:65833819-65833838 Msa1069990:CDS 35.0%
GTAGGATTGATTACCAAGAT+AGG - chr7_2:65833841-65833860 Msa1069990:CDS 35.0%
CCGATCATGGTGAAAAAATA+AGG + chr7_2:65833990-65834009 None:intergenic 35.0%
TCAAAGTAAAATCCAGAAGG+AGG + chr7_2:65834112-65834131 None:intergenic 35.0%
ATTCATGTTATCCTTCAAGC+AGG + chr7_2:65834238-65834257 None:intergenic 35.0%
AATGAATGAGAGAGAGTAAG+AGG - chr7_2:65834392-65834411 Msa1069990:intron 35.0%
ATGAATGAGAGAGAGTAAGA+GGG - chr7_2:65834393-65834412 Msa1069990:intron 35.0%
GAAAATTCTCCATTCTATCG+TGG + chr7_2:65834492-65834511 None:intergenic 35.0%
ATTAAAGAGAAGTTGGAGTG+AGG + chr7_2:65834615-65834634 None:intergenic 35.0%
TGCGAGAATTAAAGAGAAGT+TGG + chr7_2:65834622-65834641 None:intergenic 35.0%
!! GACATTTTTGAGGACCAAAT+TGG - chr7_2:65834931-65834950 Msa1069990:intron 35.0%
ATCCAGAAATTTCCACAAAC+TGG + chr7_2:65834998-65835017 None:intergenic 35.0%
TCTCAAAAGCTTAAGCTAGT+AGG + chr7_2:65835030-65835049 None:intergenic 35.0%
! AGCTCGTTATAATCCTTTTC+CGG - chr7_2:65835176-65835195 Msa1069990:intron 35.0%
! CTGATAATGATAACCGGAAA+AGG + chr7_2:65835192-65835211 None:intergenic 35.0%
ACATCGCAGTAGACAAATAT+TGG + chr7_2:65835290-65835309 None:intergenic 35.0%
ATATTTGTCTACTGCGATGT+TGG - chr7_2:65835290-65835309 Msa1069990:intron 35.0%
AAGCTAGAATCATTTCAGTG+TGG + chr7_2:65835410-65835429 None:intergenic 35.0%
! ACACTGAAATGATTCTAGCT+TGG - chr7_2:65835409-65835428 Msa1069990:intron 35.0%
AGTATCAATACGCACATACA+TGG - chr7_2:65835591-65835610 Msa1069990:intron 35.0%
! TTTAGAACCCTAATCAAAGG+GGG + chr7_2:65835662-65835681 None:intergenic 35.0%
!!! TGTGCTTTGACTTGTGATTT+TGG - chr7_2:65835737-65835756 Msa1069990:intron 35.0%
! GATTTTGGATGCACAACTTT+AGG - chr7_2:65835752-65835771 Msa1069990:intron 35.0%
AAGAAATCGTCAGTCTTGAT+TGG + chr7_2:65835852-65835871 None:intergenic 35.0%
! GGGTTTTTCATGCAAATAAG+AGG + chr7_2:65835953-65835972 None:intergenic 35.0%
CGATATGTCAGATTAATGAG+TGG - chr7_2:65836036-65836055 Msa1069990:intron 35.0%
! AATTGAAGTCTTGAGGGTTT+TGG - chr7_2:65836109-65836128 Msa1069990:CDS 35.0%
CTTGCAGCCTGATAATTTAT+CGG + chr7_2:65836149-65836168 None:intergenic 35.0%
TCAGCTAATGAGTCTGTATT+TGG + chr7_2:65836209-65836228 None:intergenic 35.0%
TATGCTAAACGATTGGCAAT+AGG - chr7_2:65836296-65836315 Msa1069990:intron 35.0%
GTTGAATCAACATCAGTTAC+TGG - chr7_2:65836446-65836465 Msa1069990:intron 35.0%
TGGTTTATAACTCTCTTGGT+TGG - chr7_2:65836830-65836849 Msa1069990:intron 35.0%
!! AGATTCTATTTCTACACCGT+TGG + chr7_2:65837113-65837132 None:intergenic 35.0%
AGAATCTCAAATTCTACCTC+TGG - chr7_2:65837126-65837145 Msa1069990:intron 35.0%
CCTTGACATAGTAGTTTCTT+AGG + chr7_2:65837168-65837187 None:intergenic 35.0%
CCTAAGAAACTACTATGTCA+AGG - chr7_2:65837165-65837184 Msa1069990:intron 35.0%
GAAAATGCAAGCCAATACTT+GGG + chr7_2:65837220-65837239 None:intergenic 35.0%
TGAAAATGCAAGCCAATACT+TGG + chr7_2:65837221-65837240 None:intergenic 35.0%
TAAGTGCTAAAACCAAATGG+TGG + chr7_2:65837253-65837272 None:intergenic 35.0%
GTGTAAGTGCTAAAACCAAA+TGG + chr7_2:65837256-65837275 None:intergenic 35.0%
AAGCGTATAAACTGATGATC+TGG + chr7_2:65837409-65837428 None:intergenic 35.0%
GAAAAGTCTTCAATAGGTCA+AGG - chr7_2:65837438-65837457 Msa1069990:CDS 35.0%
! GTGATGGAAAGTAACTAAAG+TGG + chr7_2:65837563-65837582 None:intergenic 35.0%
! AGTTTTTCCTCTTACACTGT+TGG - chr7_2:65837631-65837650 Msa1069990:intron 35.0%
!! TAGCACTCTTACTTTTGACT+TGG - chr7_2:65837674-65837693 Msa1069990:CDS 35.0%
!!! ACTCTTACTTTTGACTTGGA+AGG - chr7_2:65837678-65837697 Msa1069990:CDS 35.0%
GTGAGTTACCTTTACTATTC+AGG - chr7_2:65837718-65837737 Msa1069990:intron 35.0%
AACTGATCAAAAAGATCCAC+AGG - chr7_2:65837750-65837769 Msa1069990:intron 35.0%
TAAGATGTGTTCCATTTGGA+CGG + chr7_2:65837889-65837908 None:intergenic 35.0%
TGATGCACTTCATCTAGTAT+TGG + chr7_2:65838035-65838054 None:intergenic 35.0%
AATCAGTCCATGGATATATC+AGG - chr7_2:65838058-65838077 Msa1069990:intron 35.0%
TACCAGACAGTACAAAGAAA+AGG - chr7_2:65838191-65838210 Msa1069990:intron 35.0%
! TTCCTTTTCTTTGTACTGTC+TGG + chr7_2:65838196-65838215 None:intergenic 35.0%
! TGGTATTTGGAATGTTAGGT+TGG - chr7_2:65838401-65838420 Msa1069990:intron 35.0%
ACTCCATCTTCAATAGGTAT+AGG + chr7_2:65838428-65838447 None:intergenic 35.0%
ATACCTATTGAAGATGGAGT+TGG - chr7_2:65838428-65838447 Msa1069990:intron 35.0%
TTACCAACTCCATCTTCAAT+AGG + chr7_2:65838434-65838453 None:intergenic 35.0%
TTGGTAAAGAAGTTTCCACT+CGG - chr7_2:65838447-65838466 Msa1069990:intron 35.0%
! ATGGGCGTGATTTTATCAAA+AGG - chr7_2:65838516-65838535 Msa1069990:CDS 35.0%
! TGGGCGTGATTTTATCAAAA+GGG - chr7_2:65838517-65838536 Msa1069990:CDS 35.0%
GCAGAGAAAAATGAATGACT+TGG + chr7_2:65838693-65838712 None:intergenic 35.0%
!! CATTCATTTTTCTCTGCTCT+AGG - chr7_2:65838696-65838715 Msa1069990:intron 35.0%
GGGAAAACTTAAATCTGTTG+TGG - chr7_2:65838717-65838736 Msa1069990:intron 35.0%
TGGGTAATAATTTCCAGCAA+CGG + chr7_2:65838802-65838821 None:intergenic 35.0%
CAATAACAATCCTCCAAGAA+AGG + chr7_2:65838901-65838920 None:intergenic 35.0%
! CATGCATGTCTAAAATCTGT+TGG - chr7_2:65838931-65838950 Msa1069990:intron 35.0%
AATTTGTCCATCTTCTAAGC+TGG + chr7_2:65839158-65839177 None:intergenic 35.0%
! TCTTAAAAATGTGGCCCTTT+TGG - chr7_2:65839305-65839324 Msa1069990:intron 35.0%
TGCATAAAAAAGGCAACTTG+AGG - chr7_2:65839471-65839490 Msa1069990:intron 35.0%
TTGGTCAGCTTTCACTAAAA+TGG + chr7_2:65839752-65839771 None:intergenic 35.0%
AAGTCACTATTGACAAGGTT+GGG + chr7_2:65839880-65839899 None:intergenic 35.0%
TAAGTCACTATTGACAAGGT+TGG + chr7_2:65839881-65839900 None:intergenic 35.0%
GGTATAAGTCACTATTGACA+AGG + chr7_2:65839885-65839904 None:intergenic 35.0%
!!! TACTTATTTTGCAGGTCCAA+GGG - chr7_2:65840049-65840068 Msa1069990:intron 35.0%
ATATTTCCTGGCCAAAAGTA+CGG + chr7_2:65840122-65840141 None:intergenic 35.0%
!!! TTTGTTAGCCTTTTCCGAAA+AGG - chr7_2:65840152-65840171 Msa1069990:intron 35.0%
! GTAATTCACCTTTTCGGAAA+AGG + chr7_2:65840163-65840182 None:intergenic 35.0%
GAAAAGGTGAATTACATGCA+TGG - chr7_2:65840168-65840187 Msa1069990:intron 35.0%
! ACCCATGTAACAACATTTTC+AGG - chr7_2:65840289-65840308 Msa1069990:CDS 35.0%
TGCACTTCTATTCTGTTGAT+CGG - chr7_2:65840537-65840556 Msa1069990:CDS 35.0%
! TATCTTTTCTTGGACCTTTC+AGG - chr7_2:65840579-65840598 Msa1069990:intron 35.0%
CATATAAATGCGCTAATCGA+AGG + chr7_2:65840627-65840646 None:intergenic 35.0%
TCGATTAGCGCATTTATATG+AGG - chr7_2:65840627-65840646 Msa1069990:intron 35.0%
! GTTGACATAAGATTAGCTCA+GGG - chr7_2:65840702-65840721 Msa1069990:intron 35.0%
GAAAGAAGGTAAACGATGAT+AGG - chr7_2:65840872-65840891 Msa1069990:intron 35.0%
! TTCACAGAAAGGTGGAATTT+TGG - chr7_2:65840896-65840915 Msa1069990:intron 35.0%
TGTAATGTCACATCACTTTG+TGG - chr7_2:65841224-65841243 Msa1069990:intron 35.0%
AAATCAAGAAAGGACAGAGA+TGG - chr7_2:65841512-65841531 Msa1069990:CDS 35.0%
! TGGAGAAGAAAAGACTTGTT+TGG - chr7_2:65841532-65841551 Msa1069990:CDS 35.0%
! AGACTTGTTTGGAAAGTAGA+AGG - chr7_2:65841543-65841562 Msa1069990:CDS 35.0%
! GACTTGTTTGGAAAGTAGAA+GGG - chr7_2:65841544-65841563 Msa1069990:CDS 35.0%
TCAGACTTTACAACTATGAC+AGG + chr7_2:65841764-65841783 None:intergenic 35.0%
! AGTCTGAAGCCTTTAATTCT+TGG - chr7_2:65841777-65841796 Msa1069990:five_prime_UTR 35.0%
!! ATTTATGGAAGCTGTTTTGG+AGG + chr7_2:65841832-65841851 None:intergenic 35.0%
TCAACTGAGATATGTTCATG+GGG - chr7_2:65841985-65842004 Msa1069990:five_prime_UTR 35.0%
!!! TTTTATTTTTGGTGGTGGCC+GGG + chr7_2:65832242-65832261 None:intergenic 40.0%
AAGCGATGATACAGAGATAC+AGG + chr7_2:65832271-65832290 None:intergenic 40.0%
!! GAAAGAAGAGTACTTCCACT+TGG + chr7_2:65832345-65832364 None:intergenic 40.0%
!!! CGTCATTTTTCAACACCCAA+TGG - chr7_2:65832452-65832471 Msa1069990:CDS 40.0%
!! CATCTTTTTGGTGACCCTTT+TGG - chr7_2:65832485-65832504 Msa1069990:CDS 40.0%
TTGGGAATACTCTTCTATGG+AGG - chr7_2:65832504-65832523 Msa1069990:CDS 40.0%
! GCTCATACTCATGATGATGT+TGG - chr7_2:65832597-65832616 Msa1069990:CDS 40.0%
GGCTTGTGTTCAAAATGTGT+TGG - chr7_2:65832764-65832783 Msa1069990:intron 40.0%
! CTCTATTGGCTGATAAGAAC+AGG - chr7_2:65832802-65832821 Msa1069990:intron 40.0%
GTTACTACTTGTGTGCATAG+AGG - chr7_2:65832915-65832934 Msa1069990:intron 40.0%
ACAATCAACACTTCTCCTCA+GGG + chr7_2:65833027-65833046 None:intergenic 40.0%
TACAATCAACACTTCTCCTC+AGG + chr7_2:65833028-65833047 None:intergenic 40.0%
!!! TACTTGCTGTTTTGTGCTAC+TGG - chr7_2:65833272-65833291 Msa1069990:CDS 40.0%
! CAGTGGGTTCACATGTAAAA+TGG + chr7_2:65833309-65833328 None:intergenic 40.0%
!! GTTAAGCAGCTTGTTAGTTC+GGG - chr7_2:65833383-65833402 Msa1069990:intron 40.0%
CGAACTCCTCTTTCAGAAAT+CGG + chr7_2:65833639-65833658 None:intergenic 40.0%
GTCATAAGTACTATGCAGGT+TGG - chr7_2:65833798-65833817 Msa1069990:CDS 40.0%
CAAAAAGGAGAAGAGTCTTG+AGG - chr7_2:65833872-65833891 Msa1069990:intron 40.0%
AAGGAGGTTCATAGTTCTCA+GGG + chr7_2:65834096-65834115 None:intergenic 40.0%
TTTGACTACTTCCTGCTTGA+AGG - chr7_2:65834224-65834243 Msa1069990:intron 40.0%
GTTGGCCCCATAAAAGAAAT+AGG - chr7_2:65834551-65834570 Msa1069990:CDS 40.0%
CTATAGCAGAAAAGGGAGAA+AGG + chr7_2:65834663-65834682 None:intergenic 40.0%
GACCAGTTTGTGGAAATTTC+TGG - chr7_2:65834993-65835012 Msa1069990:CDS 40.0%
!! CGAGCTTCCATTTTTCTTAC+TGG + chr7_2:65835162-65835181 None:intergenic 40.0%
CGCATTTGCAGAAGATCTAA+GGG + chr7_2:65835340-65835359 None:intergenic 40.0%
ACGCATTTGCAGAAGATCTA+AGG + chr7_2:65835341-65835360 None:intergenic 40.0%
GAATCATTTCAGTGTGGTTG+AGG + chr7_2:65835404-65835423 None:intergenic 40.0%
CTCGGACAAATCACATAATG+TGG - chr7_2:65835549-65835568 Msa1069990:intron 40.0%
AATACGCACATACATGGTAC+CGG - chr7_2:65835597-65835616 Msa1069990:intron 40.0%
! TTGGATGCACAACTTTAGGA+TGG - chr7_2:65835756-65835775 Msa1069990:intron 40.0%
AATATGCTGCAAATGAGTCG+TGG - chr7_2:65835826-65835845 Msa1069990:intron 40.0%
GAAAACGTCATACAGGGAAA+AGG + chr7_2:65835930-65835949 None:intergenic 40.0%
AAGAGGGAAAACGTCATACA+GGG + chr7_2:65835936-65835955 None:intergenic 40.0%
TAAGAGGGAAAACGTCATAC+AGG + chr7_2:65835937-65835956 None:intergenic 40.0%
TTGGCACGATCTGAATAACT+GGG + chr7_2:65835973-65835992 None:intergenic 40.0%
ATTGGCACGATCTGAATAAC+TGG + chr7_2:65835974-65835993 None:intergenic 40.0%
AGTTATTCAGATCGTGCCAA+TGG - chr7_2:65835973-65835992 Msa1069990:intron 40.0%
CTGACATATCGTTTCAAAGC+TGG + chr7_2:65836027-65836046 None:intergenic 40.0%
! ACAGAAGTTGAACTGGTTCA+AGG - chr7_2:65836681-65836700 Msa1069990:CDS 40.0%
! ACTGGTTCAAGGAAAGAGTT+TGG - chr7_2:65836692-65836711 Msa1069990:CDS 40.0%
CATCAGCTCTTACCATATTC+AGG - chr7_2:65836801-65836820 Msa1069990:intron 40.0%
ATAACTCTCTTGGTTGGAAG+AGG - chr7_2:65836836-65836855 Msa1069990:intron 40.0%
! ACTAGAATGGATTCACTCAC+AGG + chr7_2:65836880-65836899 None:intergenic 40.0%
TTGAAGCTGCAAACATTTGC+AGG - chr7_2:65837057-65837076 Msa1069990:intron 40.0%
GTTACAGTTCATGACTCCAA+CGG - chr7_2:65837094-65837113 Msa1069990:intron 40.0%
TCAGTTTCTGTACCACCATT+TGG - chr7_2:65837238-65837257 Msa1069990:intron 40.0%
CGTATAAACTGATGATCTGG+TGG + chr7_2:65837406-65837425 None:intergenic 40.0%
GAAATTACGAACATGCTGAG+AGG + chr7_2:65837607-65837626 None:intergenic 40.0%
!!! ACTTTTGACTTGGAAGGTTG+AGG - chr7_2:65837684-65837703 Msa1069990:CDS 40.0%
TGATCAAAAAGATCCACAGG+TGG - chr7_2:65837753-65837772 Msa1069990:intron 40.0%
GATCAAAAAGATCCACAGGT+GGG - chr7_2:65837754-65837773 Msa1069990:intron 40.0%
TAGTAAGAATAACCCACCTG+TGG + chr7_2:65837769-65837788 None:intergenic 40.0%
GCTTATATCTTCCGTCCAAA+TGG - chr7_2:65837875-65837894 Msa1069990:CDS 40.0%
CATTTCGAACCTGTCTTTCA+TGG + chr7_2:65837916-65837935 None:intergenic 40.0%
!! CTTCATCTAGTATTGGTCCA+TGG + chr7_2:65838028-65838047 None:intergenic 40.0%
! CAAAGCACCTGATATATCCA+TGG + chr7_2:65838068-65838087 None:intergenic 40.0%
GGTCCTATACCTATTGAAGA+TGG - chr7_2:65838422-65838441 Msa1069990:intron 40.0%
CATAGTAGTTGAAATCCGAG+TGG + chr7_2:65838465-65838484 None:intergenic 40.0%
CACTCGGATTTCAACTACTA+TGG - chr7_2:65838463-65838482 Msa1069990:intron 40.0%
TGAAAAGTGACTCAAGTGCA+AGG + chr7_2:65838623-65838642 None:intergenic 40.0%
GGGTAATAATTTCCAGCAAC+GGG + chr7_2:65838801-65838820 None:intergenic 40.0%
!! GACAGAATTCTCAGTTTTGG+TGG - chr7_2:65839114-65839133 Msa1069990:intron 40.0%
!! GTTTTGGTGGATAGAGCTAT+AGG - chr7_2:65839127-65839146 Msa1069990:intron 40.0%
!! AAATTGAGTTGATGCTCCAC+AGG - chr7_2:65839173-65839192 Msa1069990:intron 40.0%
GTAAAGTTTCCAGAGCTCTA+AGG + chr7_2:65839497-65839516 None:intergenic 40.0%
ATCAAGCAGCAATCTCCTAT+TGG + chr7_2:65839542-65839561 None:intergenic 40.0%
! TTGCTGCTTGATGATTCTAG+AGG - chr7_2:65839550-65839569 Msa1069990:intron 40.0%
! TGTGTTGCTGACAATTGCAA+GGG - chr7_2:65839601-65839620 Msa1069990:intron 40.0%
! TTATACCTACCTAGCCTTTG+TGG - chr7_2:65839898-65839917 Msa1069990:intron 40.0%
AAAACTGCACATTGCCACAA+AGG + chr7_2:65839915-65839934 None:intergenic 40.0%
!!! GTGTTTTTGCCGATTTATGC+TGG - chr7_2:65839970-65839989 Msa1069990:intron 40.0%
!!! CTACTTATTTTGCAGGTCCA+AGG - chr7_2:65840048-65840067 Msa1069990:intron 40.0%
TCGGAAAAGGCTAACAAAAG+TGG + chr7_2:65840150-65840169 None:intergenic 40.0%
GGTAGGATGATAAAGATGAC+TGG - chr7_2:65840260-65840279 Msa1069990:CDS 40.0%
TTACATGGACGGCTTAATGA+TGG - chr7_2:65840479-65840498 Msa1069990:CDS 40.0%
ACCTTTCAGGAACTTGATCA+CGG - chr7_2:65840592-65840611 Msa1069990:intron 40.0%
! CGTTGACATAAGATTAGCTC+AGG - chr7_2:65840701-65840720 Msa1069990:intron 40.0%
! TTGATTGGCCAAGAAAGTGA+GGG + chr7_2:65840779-65840798 None:intergenic 40.0%
! TTTGATTGGCCAAGAAAGTG+AGG + chr7_2:65840780-65840799 None:intergenic 40.0%
TGCACAGATTGAAGAAGACA+AGG - chr7_2:65840804-65840823 Msa1069990:intron 40.0%
TCTATCTGTAGTGACAAGTG+TGG - chr7_2:65840828-65840847 Msa1069990:intron 40.0%
! GAGTTGAAAAAGCTTTTCCC+AGG - chr7_2:65840850-65840869 Msa1069990:intron 40.0%
! AAAGCTTTTCCCAGGAAAGA+AGG - chr7_2:65840858-65840877 Msa1069990:intron 40.0%
CATCGTTTACCTTCTTTCCT+GGG + chr7_2:65840870-65840889 None:intergenic 40.0%
TCATCGTTTACCTTCTTTCC+TGG + chr7_2:65840871-65840890 None:intergenic 40.0%
CGATGATAGGTTTCACAGAA+AGG - chr7_2:65840885-65840904 Msa1069990:intron 40.0%
TGATAGGTTTCACAGAAAGG+TGG - chr7_2:65840888-65840907 Msa1069990:intron 40.0%
TGTAAAGTCACTGAGTGATG+TGG - chr7_2:65841084-65841103 Msa1069990:intron 40.0%
!! AAAAGCGTCGAATTCGGTAA+TGG - chr7_2:65841284-65841303 Msa1069990:intron 40.0%
GCTTATCCGCAAATCAAGAA+AGG - chr7_2:65841502-65841521 Msa1069990:CDS 40.0%
! CTCTGTCCTTTCTTGATTTG+CGG + chr7_2:65841511-65841530 None:intergenic 40.0%
!! TGGAAATGGAGGTGTTTCAA+GGG - chr7_2:65841572-65841591 Msa1069990:CDS 40.0%
!! GTTAGCTCTTTTGGATCAAC+TGG + chr7_2:65841603-65841622 None:intergenic 40.0%
TGATCCAAAAGAGCTAACTG+TGG - chr7_2:65841605-65841624 Msa1069990:CDS 40.0%
! GTAAAAGTGCGGATTTCCAT+TGG + chr7_2:65841639-65841658 None:intergenic 40.0%
GACATTACGACATGTAAGGT+TGG + chr7_2:65841961-65841980 None:intergenic 40.0%
TAATGTCCGGATTCAAACCC+CGG - chr7_2:65832221-65832240 Msa1069990:three_prime_UTR 45.0%
!!! TTTATTTTTGGTGGTGGCCG+GGG + chr7_2:65832241-65832260 None:intergenic 45.0%
TCTCTGTATCATCGCTTCAC+AGG - chr7_2:65832274-65832293 Msa1069990:three_prime_UTR 45.0%
CTCTGTATCATCGCTTCACA+GGG - chr7_2:65832275-65832294 Msa1069990:three_prime_UTR 45.0%
CACTGTGCATGATAACCAAG+TGG - chr7_2:65832327-65832346 Msa1069990:three_prime_UTR 45.0%
! TGCAACGTTTTTCCGCTTCT+GGG - chr7_2:65832408-65832427 Msa1069990:three_prime_UTR 45.0%
!! GGGTGTTGAAAAATGACGAG+TGG + chr7_2:65832450-65832469 None:intergenic 45.0%
ACTTCACAGGGTATAGTCTC+TGG - chr7_2:65832552-65832571 Msa1069990:CDS 45.0%
CTTCACAGGGTATAGTCTCT+GGG - chr7_2:65832553-65832572 Msa1069990:CDS 45.0%
TGGGAAGCTCAATGTTCATC+TGG - chr7_2:65832572-65832591 Msa1069990:CDS 45.0%
! TTTCCATGCCTTTTTCCCTG+AGG - chr7_2:65833009-65833028 Msa1069990:intron 45.0%
ACACTTCTCCTCAGGGAAAA+AGG + chr7_2:65833020-65833039 None:intergenic 45.0%
TTTACATGTGAACCCACTGC+AGG - chr7_2:65833310-65833329 Msa1069990:intron 45.0%
ATCCCACCATCGCTGAAAAA+AGG + chr7_2:65833336-65833355 None:intergenic 45.0%
AGTCACCCTTCATGTTTGTG+AGG - chr7_2:65833464-65833483 Msa1069990:intron 45.0%
GTCACCCTTCATGTTTGTGA+GGG - chr7_2:65833465-65833484 Msa1069990:intron 45.0%
TTTCCATGTCACAGAAACGG+TGG - chr7_2:65833547-65833566 Msa1069990:intron 45.0%
TGGCATGTGTATGCATGATG+AGG - chr7_2:65833567-65833586 Msa1069990:intron 45.0%
!! TGGACACCGATTTCTGAAAG+AGG - chr7_2:65833630-65833649 Msa1069990:intron 45.0%
TGCACAGCAGAATGTCCAAA+CGG + chr7_2:65833694-65833713 None:intergenic 45.0%
TGCTGTGCAGGCTTACTTAT+TGG - chr7_2:65833705-65833724 Msa1069990:intron 45.0%
GCTGTGCAGGCTTACTTATT+GGG - chr7_2:65833706-65833725 Msa1069990:intron 45.0%
AGAAGAGTCTTGAGGTTGTC+TGG - chr7_2:65833880-65833899 Msa1069990:intron 45.0%
AGTTTAAGAGACGCCGATCA+TGG + chr7_2:65834003-65834022 None:intergenic 45.0%
GAAGGAGGTTCATAGTTCTC+AGG + chr7_2:65834097-65834116 None:intergenic 45.0%
GAGAACTATGAACCTCCTTC+TGG - chr7_2:65834097-65834116 Msa1069990:intron 45.0%
TGGATGTACCCACGATAGAA+TGG - chr7_2:65834480-65834499 Msa1069990:intron 45.0%
AAGAGAAGTTGGAGTGAGGT+AGG + chr7_2:65834611-65834630 None:intergenic 45.0%
AGCAGAAAAGGGAGAAAGGT+TGG + chr7_2:65834659-65834678 None:intergenic 45.0%
AAGCTTAAGCTAGTAGGCAG+TGG + chr7_2:65835024-65835043 None:intergenic 45.0%
!!! GTTTTGAGGTCAAGTGAGTG+TGG - chr7_2:65835101-65835120 Msa1069990:intron 45.0%
GAATAAGCTTGTCCAACTGC+CGG + chr7_2:65835619-65835638 None:intergenic 45.0%
AGGTATCACCCCCTTTGATT+AGG - chr7_2:65835651-65835670 Msa1069990:CDS 45.0%
GGTATCACCCCCTTTGATTA+GGG - chr7_2:65835652-65835671 Msa1069990:CDS 45.0%
GTATCCTGTCCAGAAACCAT+TGG + chr7_2:65835992-65836011 None:intergenic 45.0%
ACGATTGGCAATAGGCTACA+AGG - chr7_2:65836304-65836323 Msa1069990:intron 45.0%
ATTGGCAATAGGCTACAAGG+AGG - chr7_2:65836307-65836326 Msa1069990:intron 45.0%
GATATTCTTTGTGCAGGCAG+AGG - chr7_2:65836394-65836413 Msa1069990:CDS 45.0%
TTGAAAGTGAAGGGGCTGTT+TGG - chr7_2:65836548-65836567 Msa1069990:intron 45.0%
TGAAAGTGAAGGGGCTGTTT+GGG - chr7_2:65836549-65836568 Msa1069990:intron 45.0%
TCCTGCAACAGAAGTTGAAC+TGG - chr7_2:65836674-65836693 Msa1069990:CDS 45.0%
ACCAGTTCAACTTCTGTTGC+AGG + chr7_2:65836678-65836697 None:intergenic 45.0%
TCAAATTCTACCTCTGGCTG+AGG - chr7_2:65837132-65837151 Msa1069990:intron 45.0%
TCTACAAATACCTCAGCCAG+AGG + chr7_2:65837145-65837164 None:intergenic 45.0%
CAATACTTGGGTGTCTTGGA+TGG + chr7_2:65837208-65837227 None:intergenic 45.0%
CATCCAAGACACCCAAGTAT+TGG - chr7_2:65837206-65837225 Msa1069990:intron 45.0%
AAGCCAATACTTGGGTGTCT+TGG + chr7_2:65837212-65837231 None:intergenic 45.0%
TACGAACATGCTGAGAGGAA+AGG + chr7_2:65837602-65837621 None:intergenic 45.0%
TGCATCAACGAATCAGTCCA+TGG - chr7_2:65838048-65838067 Msa1069990:intron 45.0%
TGCAAGGTAGCATCTAGTGT+TGG + chr7_2:65838607-65838626 None:intergenic 45.0%
TTGTGGATTTCATCCTCTGC+AGG - chr7_2:65838734-65838753 Msa1069990:intron 45.0%
AATAATTTCCAGCAACGGGC+TGG + chr7_2:65838797-65838816 None:intergenic 45.0%
! TTGGTGGATAGAGCTATAGG+AGG - chr7_2:65839130-65839149 Msa1069990:intron 45.0%
! TGTGGCCCTTTTGGCATATA+TGG - chr7_2:65839314-65839333 Msa1069990:intron 45.0%
!! TGATTCTAGAGGTGTTGCAG+AGG - chr7_2:65839561-65839580 Msa1069990:intron 45.0%
! CTGTGTTGCTGACAATTGCA+AGG - chr7_2:65839600-65839619 Msa1069990:intron 45.0%
! GAAAGCTGACCAAAGTGTCA+AGG - chr7_2:65839759-65839778 Msa1069990:intron 45.0%
!! TTGCTTTATTTGTGTGCGCG+TGG - chr7_2:65840511-65840530 Msa1069990:CDS 45.0%
CCTTTCAGGAACTTGATCAC+GGG - chr7_2:65840593-65840612 Msa1069990:intron 45.0%
! GTTTTCCTCCCTCACTTTCT+TGG - chr7_2:65840768-65840787 Msa1069990:CDS 45.0%
! GACTGAAGTGTGCTTTTCCT+TGG - chr7_2:65841451-65841470 Msa1069990:intron 45.0%
TGAAACACCTCCATTTCCAG+AGG + chr7_2:65841571-65841590 None:intergenic 45.0%
!! CTGGAAATGGAGGTGTTTCA+AGG - chr7_2:65841571-65841590 Msa1069990:CDS 45.0%
!! GGAAATGGAGGTGTTTCAAG+GGG - chr7_2:65841573-65841592 Msa1069990:CDS 45.0%
!! AGCTCCACAGTTAGCTCTTT+TGG + chr7_2:65841612-65841631 None:intergenic 45.0%
! TTTTAACCCTCCGGTTTACG+TGG - chr7_2:65841857-65841876 Msa1069990:intron 45.0%
TTTAACCCTCCGGTTTACGT+GGG - chr7_2:65841858-65841877 Msa1069990:intron 45.0%
TTTACGTGGGAAAAGGGCTA+TGG - chr7_2:65841871-65841890 Msa1069990:intron 45.0%
TTACGTGGGAAAAGGGCTAT+GGG - chr7_2:65841872-65841891 Msa1069990:intron 45.0%
CTATGGGTTCCACCTAAGAA+TGG - chr7_2:65841888-65841907 Msa1069990:intron 45.0%
CCAACTGAACTAAGCTCACG+AGG + chr7_2:65832180-65832199 None:intergenic 50.0%
CCTCGTGAGCTTAGTTCAGT+TGG - chr7_2:65832177-65832196 Msa1069990:three_prime_UTR 50.0%
! CTGCAACGTTTTTCCGCTTC+TGG - chr7_2:65832407-65832426 Msa1069990:three_prime_UTR 50.0%
! GCAACGTTTTTCCGCTTCTG+GGG - chr7_2:65832409-65832428 Msa1069990:three_prime_UTR 50.0%
AACTCTTCACACCCCAGAAG+CGG + chr7_2:65832423-65832442 None:intergenic 50.0%
TCTCCTCAGGGAAAAAGGCA+TGG + chr7_2:65833015-65833034 None:intergenic 50.0%
GCTGAAAAAAGGCCTGCAGT+GGG + chr7_2:65833325-65833344 None:intergenic 50.0%
!!! TGCAGGCCTTTTTTCAGCGA+TGG - chr7_2:65833327-65833346 Msa1069990:intron 50.0%
!!! AGGCCTTTTTTCAGCGATGG+TGG - chr7_2:65833330-65833349 Msa1069990:intron 50.0%
!!! GGCCTTTTTTCAGCGATGGT+GGG - chr7_2:65833331-65833350 Msa1069990:intron 50.0%
ATGCCACCGTTTCTGTGACA+TGG + chr7_2:65833553-65833572 None:intergenic 50.0%
GGTTGGCAAATTGACCCGTT+TGG - chr7_2:65833676-65833695 Msa1069990:intron 50.0%
GCACAGCAGAATGTCCAAAC+GGG + chr7_2:65833693-65833712 None:intergenic 50.0%
GTTTGGACATTCTGCTGTGC+AGG - chr7_2:65833693-65833712 Msa1069990:intron 50.0%
AGTCTTGAGGTTGTCTGGCA+AGG - chr7_2:65833885-65833904 Msa1069990:intron 50.0%
CGTGTCTTCCAGATCTTTGC+TGG - chr7_2:65834064-65834083 Msa1069990:intron 50.0%
GGAATGCACCAGCAAAGATC+TGG + chr7_2:65834075-65834094 None:intergenic 50.0%
CCACACTGCTAGTAGGTGAA+GGG + chr7_2:65834463-65834482 None:intergenic 50.0%
TCCACACTGCTAGTAGGTGA+AGG + chr7_2:65834464-65834483 None:intergenic 50.0%
GGTACATCCACACTGCTAGT+AGG + chr7_2:65834470-65834489 None:intergenic 50.0%
AGAAGTTGGAGTGAGGTAGG+CGG + chr7_2:65834608-65834627 None:intergenic 50.0%
AGTGTGGCAATCTCTCACTC+TGG - chr7_2:65835117-65835136 Msa1069990:intron 50.0%
!! ACATACATGGTACCGGCAGT+TGG - chr7_2:65835604-65835623 Msa1069990:CDS 50.0%
CAGATCGTGCCAATGGTTTC+TGG - chr7_2:65835980-65835999 Msa1069990:intron 50.0%
GGACAGGATACTTTACCAGC+AGG - chr7_2:65836001-65836020 Msa1069990:intron 50.0%
TTTGGAGGGCGAAAGAACTC+AGG - chr7_2:65836182-65836201 Msa1069990:intron 50.0%
TTGGAGGGCGAAAGAACTCA+GGG - chr7_2:65836183-65836202 Msa1069990:intron 50.0%
CAACACCATGATGCAGTCAC+CGG - chr7_2:65836245-65836264 Msa1069990:CDS 50.0%
!!! CACATGCTGCTTTTCTGTGC+CGG + chr7_2:65836267-65836286 None:intergenic 50.0%
! GGAACTGGTTTCGTCATCAC+TGG - chr7_2:65836415-65836434 Msa1069990:CDS 50.0%
!! TTCGTCATCACTGGCTTGCT+TGG - chr7_2:65836424-65836443 Msa1069990:intron 50.0%
GTTCCAGTGACTGTTCTCCA+TGG - chr7_2:65838008-65838027 Msa1069990:intron 50.0%
TACGTGACTACCGAACAGAC+TGG - chr7_2:65838757-65838776 Msa1069990:intron 50.0%
ACGTGACTACCGAACAGACT+GGG - chr7_2:65838758-65838777 Msa1069990:intron 50.0%
CTTCCAAGTCCCAGTCTGTT+CGG + chr7_2:65838770-65838789 None:intergenic 50.0%
GGAGGATCCAGCTTAGAAGA+TGG - chr7_2:65839148-65839167 Msa1069990:intron 50.0%
AACTTGAGGCCTTAGAGCTC+TGG - chr7_2:65839485-65839504 Msa1069990:intron 50.0%
CATTGCCACAAAGGCTAGGT+AGG + chr7_2:65839906-65839925 None:intergenic 50.0%
TGCACATTGCCACAAAGGCT+AGG + chr7_2:65839910-65839929 None:intergenic 50.0%
TAGAATAGACCCCTTGGGTG+AGG - chr7_2:65840083-65840102 Msa1069990:intron 50.0%
AGAATAGACCCCTTGGGTGA+GGG - chr7_2:65840084-65840103 Msa1069990:intron 50.0%
! ATTTAGCTCCCTCACCCAAG+GGG + chr7_2:65840095-65840114 None:intergenic 50.0%
! CATTTAGCTCCCTCACCCAA+GGG + chr7_2:65840096-65840115 None:intergenic 50.0%
! GCTAAATGGCGCCGTACTTT+TGG - chr7_2:65840108-65840127 Msa1069990:intron 50.0%
CCCGTGATCAAGTTCCTGAA+AGG + chr7_2:65840596-65840615 None:intergenic 50.0%
ATTGGCCAAGAAAGTGAGGG+AGG + chr7_2:65840776-65840795 None:intergenic 50.0%
TGGAAAGTAGAAGGGTCCTC+TGG - chr7_2:65841552-65841571 Msa1069990:CDS 50.0%
! GTAGAAGGGTCCTCTGGAAA+TGG - chr7_2:65841558-65841577 Msa1069990:CDS 50.0%
!! AATGGAGGTGTTTCAAGGGG+TGG - chr7_2:65841576-65841595 Msa1069990:CDS 50.0%
! AACTGTGGAGCTTGCTCCAA+TGG - chr7_2:65841620-65841639 Msa1069990:CDS 50.0%
! CTTTTCCCACGTAAACCGGA+GGG + chr7_2:65841866-65841885 None:intergenic 50.0%
CTCCGGTTTACGTGGGAAAA+GGG - chr7_2:65841865-65841884 Msa1069990:intron 50.0%
! AGCCCTTTTCCCACGTAAAC+CGG + chr7_2:65841870-65841889 None:intergenic 50.0%
CGCTGAAAAAAGGCCTGCAG+TGG + chr7_2:65833326-65833345 None:intergenic 55.0%
TGGCAAGGTAGCAAGAGCCT+CGG - chr7_2:65833900-65833919 Msa1069990:intron 55.0%
CCCTTCACCTACTAGCAGTG+TGG - chr7_2:65834460-65834479 Msa1069990:intron 55.0%
AGGTAGGCGGTGAGAAAGAG+AGG + chr7_2:65834595-65834614 None:intergenic 55.0%
! CGTGCCAATGGTTTCTGGAC+AGG - chr7_2:65835985-65836004 Msa1069990:intron 55.0%
! TCGTTTCAAAGCTGGCCTGC+TGG + chr7_2:65836019-65836038 None:intergenic 55.0%
CGGCACAGAAAAGCAGCATG+TGG - chr7_2:65836265-65836284 Msa1069990:intron 55.0%
CTTTGTGCAGGCAGAGGAAC+TGG - chr7_2:65836400-65836419 Msa1069990:CDS 55.0%
GGTCCATGGAGAACAGTCAC+TGG + chr7_2:65838014-65838033 None:intergenic 55.0%
CTACCGAACAGACTGGGACT+TGG - chr7_2:65838764-65838783 Msa1069990:intron 55.0%
! CCATTTAGCTCCCTCACCCA+AGG + chr7_2:65840097-65840116 None:intergenic 55.0%
CCTTGGGTGAGGGAGCTAAA+TGG - chr7_2:65840094-65840113 Msa1069990:intron 55.0%
! GAAGGGTCCTCTGGAAATGG+AGG - chr7_2:65841561-65841580 Msa1069990:CDS 55.0%
! CCTTTTCCCACGTAAACCGG+AGG + chr7_2:65841867-65841886 None:intergenic 55.0%
CCTCCGGTTTACGTGGGAAA+AGG - chr7_2:65841864-65841883 Msa1069990:intron 55.0%
TGGTGGCCGGGGTTTGAATC+CGG + chr7_2:65832230-65832249 None:intergenic 60.0%
TCACCTGAGCAGATGAGCCG+AGG + chr7_2:65833920-65833939 None:intergenic 60.0%
! CTGTGCCGGTGACTGCATCA+TGG + chr7_2:65836253-65836272 None:intergenic 60.0%
CGGTAGTCACGTACCTGCAG+AGG + chr7_2:65838750-65838769 None:intergenic 60.0%
! ATGGCGCCGTACTTTTGGCC+AGG - chr7_2:65840113-65840132 Msa1069990:intron 60.0%
GAGCCTCGGCTCATCTGCTC+AGG - chr7_2:65833914-65833933 Msa1069990:intron 65.0%
GAAGTGCACCAGCCCGTTGC+TGG - chr7_2:65838786-65838805 Msa1069990:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 65832089 65842050 65832089 ID=Msa1069990;Name=Msa1069990
chr7_2 mRNA 65832089 65842050 65832089 ID=Msa1069990-mRNA-1;Parent=Msa1069990;Name=Msa1069990-mRNA-1;_AED=0.09;_eAED=0.09;_QI=225|1|1|1|0.96|0.93|30|349|1015
chr7_2 exon 65832089 65832659 65832089 ID=Msa1069990-mRNA-1:exon:13948;Parent=Msa1069990-mRNA-1
chr7_2 exon 65833260 65833328 65833260 ID=Msa1069990-mRNA-1:exon:13947;Parent=Msa1069990-mRNA-1
chr7_2 exon 65833491 65833538 65833491 ID=Msa1069990-mRNA-1:exon:13946;Parent=Msa1069990-mRNA-1
chr7_2 exon 65833776 65833874 65833776 ID=Msa1069990-mRNA-1:exon:13945;Parent=Msa1069990-mRNA-1
chr7_2 exon 65833966 65834076 65833966 ID=Msa1069990-mRNA-1:exon:13944;Parent=Msa1069990-mRNA-1
chr7_2 exon 65834509 65834593 65834509 ID=Msa1069990-mRNA-1:exon:13943;Parent=Msa1069990-mRNA-1
chr7_2 exon 65834945 65835057 65834945 ID=Msa1069990-mRNA-1:exon:13942;Parent=Msa1069990-mRNA-1
chr7_2 exon 65835318 65835383 65835318 ID=Msa1069990-mRNA-1:exon:13941;Parent=Msa1069990-mRNA-1
chr7_2 exon 65835601 65835720 65835601 ID=Msa1069990-mRNA-1:exon:13940;Parent=Msa1069990-mRNA-1
chr7_2 exon 65835903 65835950 65835903 ID=Msa1069990-mRNA-1:exon:13939;Parent=Msa1069990-mRNA-1
chr7_2 exon 65836060 65836131 65836060 ID=Msa1069990-mRNA-1:exon:13938;Parent=Msa1069990-mRNA-1
chr7_2 exon 65836214 65836273 65836214 ID=Msa1069990-mRNA-1:exon:13937;Parent=Msa1069990-mRNA-1
chr7_2 exon 65836368 65836439 65836368 ID=Msa1069990-mRNA-1:exon:13936;Parent=Msa1069990-mRNA-1
chr7_2 exon 65836612 65836739 65836612 ID=Msa1069990-mRNA-1:exon:13935;Parent=Msa1069990-mRNA-1
chr7_2 exon 65836841 65837060 65836841 ID=Msa1069990-mRNA-1:exon:13934;Parent=Msa1069990-mRNA-1
chr7_2 exon 65837260 65837316 65837260 ID=Msa1069990-mRNA-1:exon:13933;Parent=Msa1069990-mRNA-1
chr7_2 exon 65837426 65837491 65837426 ID=Msa1069990-mRNA-1:exon:13932;Parent=Msa1069990-mRNA-1
chr7_2 exon 65837640 65837729 65837640 ID=Msa1069990-mRNA-1:exon:13931;Parent=Msa1069990-mRNA-1
chr7_2 exon 65837811 65837978 65837811 ID=Msa1069990-mRNA-1:exon:13930;Parent=Msa1069990-mRNA-1
chr7_2 exon 65838071 65838164 65838071 ID=Msa1069990-mRNA-1:exon:13929;Parent=Msa1069990-mRNA-1
chr7_2 exon 65838265 65838365 65838265 ID=Msa1069990-mRNA-1:exon:13928;Parent=Msa1069990-mRNA-1
chr7_2 exon 65838487 65838600 65838487 ID=Msa1069990-mRNA-1:exon:13927;Parent=Msa1069990-mRNA-1
chr7_2 exon 65839822 65839893 65839822 ID=Msa1069990-mRNA-1:exon:13926;Parent=Msa1069990-mRNA-1
chr7_2 exon 65839980 65840063 65839980 ID=Msa1069990-mRNA-1:exon:13925;Parent=Msa1069990-mRNA-1
chr7_2 exon 65840204 65840323 65840204 ID=Msa1069990-mRNA-1:exon:13924;Parent=Msa1069990-mRNA-1
chr7_2 exon 65840404 65840578 65840404 ID=Msa1069990-mRNA-1:exon:13923;Parent=Msa1069990-mRNA-1
chr7_2 exon 65840719 65840807 65840719 ID=Msa1069990-mRNA-1:exon:13922;Parent=Msa1069990-mRNA-1
chr7_2 exon 65841294 65841377 65841294 ID=Msa1069990-mRNA-1:exon:13921;Parent=Msa1069990-mRNA-1
chr7_2 exon 65841468 65841819 65841468 ID=Msa1069990-mRNA-1:exon:13920;Parent=Msa1069990-mRNA-1
chr7_2 exon 65841977 65842050 65841977 ID=Msa1069990-mRNA-1:exon:13919;Parent=Msa1069990-mRNA-1
chr7_2 five_prime_UTR 65841977 65842050 65841977 ID=Msa1069990-mRNA-1:five_prime_utr;Parent=Msa1069990-mRNA-1
chr7_2 five_prime_UTR 65841669 65841819 65841669 ID=Msa1069990-mRNA-1:five_prime_utr;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65841468 65841668 65841468 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65841294 65841377 65841294 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65840719 65840807 65840719 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65840404 65840578 65840404 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65840204 65840323 65840204 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65839980 65840063 65839980 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65839822 65839893 65839822 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65838487 65838600 65838487 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65838265 65838365 65838265 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65838071 65838164 65838071 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65837811 65837978 65837811 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65837640 65837729 65837640 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65837426 65837491 65837426 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65837260 65837316 65837260 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65836841 65837060 65836841 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65836612 65836739 65836612 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65836368 65836439 65836368 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65836214 65836273 65836214 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65836060 65836131 65836060 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65835903 65835950 65835903 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65835601 65835720 65835601 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65835318 65835383 65835318 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65834945 65835057 65834945 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65834509 65834593 65834509 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65833966 65834076 65833966 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65833776 65833874 65833776 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65833491 65833538 65833491 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65833260 65833328 65833260 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 CDS 65832438 65832659 65832438 ID=Msa1069990-mRNA-1:cds;Parent=Msa1069990-mRNA-1
chr7_2 three_prime_UTR 65832089 65832437 65832089 ID=Msa1069990-mRNA-1:three_prime_utr;Parent=Msa1069990-mRNA-1
Gene Sequence

>Msa1069990

ATGGAGAAAAAATTCATCTTTTTGGTGACCCTTTTGGGAATACTCTTCTATGGAGGAGAATCAAAGTTTATGGTGTATAACACTTCACAGGGTATAGTCTCTGGGAAGCTCAATGTTCATCTGGTTGCTCATACTCATGATGATGTTGGATGGTTGAAGACTGTTGATCAGTACTATGTTGGTTCCAACAATTCTATTCAGGGGGCTTGTGTTCAAAATGTGTTGGATTCTATGGTTCATGCTCTATTGGCTGATAAGAACAGGAAATTTATCTATGTGGAGATAGCCTTTTTTCAGCGATGGTGGGATGATCAGAGTGAAGCTGTTCAGAATATAGTTAAGCAGCTTGTTAGTTCGGGTCAACTAGAGTTCATAAACGGTGGCATGTGTATGCATGATGAGGCAGTAGTTCATTACATAGACATGATTGATCAGACTACACTTGGACACCGATTTCTGAAAGAGGAGTTCGATTTGACTCCAAGAATTGGTTGGCAAATTGACCCGTTTGGACATTCTGCTGTGCAGGCTTACTTATTGGGAGCTGAAGTTGGCTTTGATTCACTTTTCTTTGGTAGGATTGATTACCAAGATAGGAATAAACGCAAAAAGGAGAAGAGTCTTGAGGTTGTCTGGCAAGGTAGCAAGAGCCTCGGCTCATCTGCTCAGATCTTTGCTGGTGCATTCCCTGAGAACTATGAACCTCCTTCTGGATTTTACTTTGAAGTGAACGATGATTCACAAATAGTTCAAGATAACATGAATTTGTTTGATTACAATGTGCAAGATAGAGTGAATGACTTTGTTGCTGCTGCATTATCACAAGCAAACATAACTCGGACAAATCACATAATGTGGACAATGGGAACTGATTTTAAGTATCAATACGCACATACATGGTACCGGCAGTTGGACAAGCTTATTCATTATGTGAACAAGGATGGACGTGTCAATGCTCTGTACTCTACACCATCCATATATACAGATGCAAAATATGCTGCAAATGAGTCGTGGCCAATCAAGACTGACGATTTCTTCCCTTATTCAGATCGTGCCAATGGTTTCTGGACAGGATACTTTACCAGCAGGCCAGCTTTGAAACGATATGTCAGATTAATGAGTGGCTATTATTTGGCTGCAAGACAGTTAGAATATTTTGGAGGGCGAAAGAACTCAGGGCCAAATACAGACTCATTAGCTGATGCTTTAGCAATTGCTCAACACCATGATGCAGTCACCGGCACAGAAAAGCAGCATGTGGCCAATGATTATGCTAAACGATTGGCAATAGGCTACAAGGAGGCAGAGGAACTGGTTTCGTCATCACTGGCTTGCTTGGTTGAATCAACATCAGTTACTGGATGTCATAACCCAGTTATAAAGTTTCAACAATGTCCGCTTTTGAACATAACTTATTGTCCTGCAACAGAAGTTGAACTGGTTCAAGGAAAGAGTTTGGTTATTGTGGTTTATAACTCTCTTGGTTGGAAGAGGAATGAAGTGATTCGAATTCCTGTTATTGATGGTGATGTTACAGTTCATGACTCCAACGGTGTAGAAATAGAATCTCAAATTCTACCTCTGGCTGAGGTATTTGTAGACCTAAGAAACTACTATGTCAAGGCATATTTAGGACAAAATCCATCCAAGACACCCAAGTATTGGCTTGCATTTTCAGTTTCTGTACCACCATTTGGTTTTAGCACTTACACTGTCTCGACTGCCAAAAAAACAGGTTCCACCAGATCATCAGTTTATACGCTTCAAAGTCATGAAAAGTCTTCAATAGGTCAAGGAAATTTGAAGCTTACATTTTCTACAGATCAACAAAAACATACCAATTATGTTAATGCAAGAAACATGGTTGAGGAACAAGTTGAAGTGAGTTACCTTTACTATTCAGGGTATAATGGAACTGATCAAAAAGATCCACAGAATGCTGGAGCTTATATCTTCCGTCCAAATGGAACACATCTTATAAACCATGAAAGACAGGTTCCAGTGACTGTTCTCCATGGACCAATACTAGATGAAGTGCATCAACGAATCAGTCCATGGATATATCAGATTACCAGACAGTACAAAGAAAAGGAACATGTTGAAGTAGAGTTTATTGTTGGTCCTATACCTATTGAAGATGGAGTTGGTAAAGAAGTTTCCACTCGGATTTCAACTACTATGGAAACCAATAAAACTTTTTACACAGATTCTAATGGGCGTGATTTTATCAAAAGGGTACGTGACTACCGAACAGACTGGGACTTGGAAGTGCACCAGCCCGTTGCTGGAAATTATTACCCAATTAATCTTGGGATATACATAGAAGATGATAAGACAGAATTCTCAGTTTTGGTGGATAGAGCTATAGGAGGATCCAGCTTAGAAGATGGACAAATTGAGTTGATGCTCCACAGGAGATTGCTGCTTGATGATTCTAGAGGTGTTGCAGAGGCCTTAAATGAAACAGACTGTGTTGCTGACAATTGCAAGGGTCTAACTGTCCAAGGGAAATATTATTATAGAATAGACCCCTTGGGTGAGGGAGCTAAATGGCGCCGTACTTTTGGCCAGGAAATATATTCTCCACTTTTGTTAGCCTTTTCCGAAAAGGATGATAAAGATGACTGGATGAATACCCATGTAACAACATTTTCAGGATTTGATTCTTCTTACACATTACCAGAAAACATTGTTATTATAACATTACAGGAACTTGATCACGGGACAGTTCTCCTTCGATTAGCGCATTTATATGAGATTGAAGAAGACAAGGATCTATCTGTAGTGACAAGTGTGGAGTTGAAAAAGCTTTTCCCAGGAAAGAAGATCAAAGAAGTGAAAGAAATGAGCTTATCCGCAAATCAAGAAAGGACAGAGATGGAGAAGAAAAGACTTGTTTGGAAAGTAGAAGGGTCCTCTGGAAATGGAGGTGTTTCAAGGGGTGGTCCAGTTGATCCAAAAGAGCTAACTGTGGAGCTTGCTCCAATGGAAATCCGCACTTTTACCATTTACTTTGATAGTAGTAACCATCTTTTAGATGCTTTGTAG
Protein sequence

>Msa1069990

MEKKFIFLVTLLGILFYGGESKFMVYNTSQGIVSGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSMVHALLADKNRKFIYVEIAFFQRWWDDQSEAVQNIVKQLVSSGQLEFINGGMCMHDEAVVHYIDMIDQTTLGHRFLKEEFDLTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFGRIDYQDRNKRKKEKSLEVVWQGSKSLGSSAQIFAGAFPENYEPPSGFYFEVNDDSQIVQDNMNLFDYNVQDRVNDFVAAALSQANITRTNHIMWTMGTDFKYQYAHTWYRQLDKLIHYVNKDGRVNALYSTPSIYTDAKYAANESWPIKTDDFFPYSDRANGFWTGYFTSRPALKRYVRLMSGYYLAARQLEYFGGRKNSGPNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRLAIGYKEAEELVSSSLACLVESTSVTGCHNPVIKFQQCPLLNITYCPATEVELVQGKSLVIVVYNSLGWKRNEVIRIPVIDGDVTVHDSNGVEIESQILPLAEVFVDLRNYYVKAYLGQNPSKTPKYWLAFSVSVPPFGFSTYTVSTAKKTGSTRSSVYTLQSHEKSSIGQGNLKLTFSTDQQKHTNYVNARNMVEEQVEVSYLYYSGYNGTDQKDPQNAGAYIFRPNGTHLINHERQVPVTVLHGPILDEVHQRISPWIYQITRQYKEKEHVEVEFIVGPIPIEDGVGKEVSTRISTTMETNKTFYTDSNGRDFIKRVRDYRTDWDLEVHQPVAGNYYPINLGIYIEDDKTEFSVLVDRAIGGSSLEDGQIELMLHRRLLLDDSRGVAEALNETDCVADNCKGLTVQGKYYYRIDPLGEGAKWRRTFGQEIYSPLLLAFSEKDDKDDWMNTHVTTFSGFDSSYTLPENIVIITLQELDHGTVLLRLAHLYEIEEDKDLSVVTSVELKKLFPGKKIKEVKEMSLSANQERTEMEKKRLVWKVEGSSGNGGVSRGGPVDPKELTVELAPMEIRTFTIYFDSSNHLLDAL*