AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0378360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378360 MtrunA17_Chr3g0130641 95.597 477 21 0 1 477 1 477 0.0 947
Msa0378360 MtrunA17_Chr3g0130651 71.767 464 129 1 11 474 4 465 0.0 674
Msa0378360 MtrunA17_Chr3g0125081 63.410 481 170 3 1 477 1 479 0.0 652
Msa0378360 MtrunA17_Chr8g0384661 67.627 451 146 0 27 477 44 494 0.0 652
Msa0378360 MtrunA17_Chr3g0125091 63.693 482 168 4 1 477 1 480 0.0 643
Msa0378360 MtrunA17_Chr3g0125101 62.241 482 175 4 1 477 1 480 0.0 632
Msa0378360 MtrunA17_Chr4g0037201 59.794 485 183 3 5 477 28 512 0.0 619
Msa0378360 MtrunA17_Chr1g0159761 63.113 469 165 3 13 477 11 475 0.0 607
Msa0378360 MtrunA17_Chr1g0146491 52.790 466 213 4 18 476 6 471 0.0 533
Msa0378360 MtrunA17_Chr3g0140761 51.452 482 227 5 1 476 1 481 0.0 530
Msa0378360 MtrunA17_Chr1g0206821 47.510 522 209 5 20 476 9 530 5.42e-170 489
Msa0378360 MtrunA17_Chr1g0206871 50.109 457 214 4 33 476 15 470 1.88e-168 483
Msa0378360 MtrunA17_Chr1g0146411 47.589 477 240 4 1 474 1 470 2.17e-164 473
Msa0378360 MtrunA17_Chr3g0103231 49.324 444 220 2 26 466 16 457 3.04e-164 472
Msa0378360 MtrunA17_Chr3g0103211 49.550 444 219 2 26 466 16 457 1.35e-160 462
Msa0378360 MtrunA17_Chr3g0140531 47.598 458 227 5 24 473 15 467 7.00e-156 451
Msa0378360 MtrunA17_Chr3g0103221 47.500 440 226 2 30 466 27 464 8.92e-155 448
Msa0378360 MtrunA17_Chr5g0447221 45.842 469 244 5 2 466 1 463 2.28e-153 444
Msa0378360 MtrunA17_Chr3g0103271 48.043 460 233 3 10 465 4 461 3.82e-149 433
Msa0378360 MtrunA17_Chr3g0140541 48.690 458 228 4 18 473 14 466 2.38e-148 432
Msa0378360 MtrunA17_Chr1g0146331 44.592 453 243 4 27 474 14 463 2.44e-147 429
Msa0378360 MtrunA17_Chr1g0146391 46.374 455 231 5 27 474 6 454 2.82e-147 428
Msa0378360 MtrunA17_Chr2g0293331 45.197 458 243 5 21 474 1 454 4.19e-146 425
Msa0378360 MtrunA17_Chr5g0447231 43.836 438 240 4 33 466 25 460 2.32e-127 378
Msa0378360 MtrunA17_Chr1g0206851 48.634 366 177 4 114 474 19 378 1.26e-126 373
Msa0378360 MtrunA17_Chr5g0402151 60.339 295 84 3 36 330 3 264 1.60e-115 341
Msa0378360 MtrunA17_Chr1g0206831 49.107 336 160 3 138 468 6 335 4.04e-112 334
Msa0378360 MtrunA17_Chr3g0103251 45.739 352 157 3 147 466 21 370 2.87e-109 328
Msa0378360 MtrunA17_Chr3g0130671 64.935 231 81 0 16 246 22 252 8.92e-108 321
Msa0378360 MtrunA17_Chr3g0130661 66.854 178 59 0 297 474 1 178 1.80e-83 255
Msa0378360 MtrunA17_Chr6g0458931 29.801 453 268 10 33 474 42 455 5.36e-49 174
Msa0378360 MtrunA17_Chr2g0331721 29.464 448 263 11 4 438 18 425 5.80e-48 171
Msa0378360 MtrunA17_Chr5g0422741 32.334 467 254 16 20 470 15 435 8.25e-47 167
Msa0378360 MtrunA17_Chr8g0376991 28.728 456 282 12 28 474 15 436 2.05e-45 164
Msa0378360 MtrunA17_Chr1g0184721 27.313 454 291 13 27 473 16 437 1.15e-44 162
Msa0378360 MtrunA17_Chr4g0057851 28.728 456 261 14 34 471 11 420 1.73e-43 158
Msa0378360 MtrunA17_Chr1g0198531 30.238 463 286 11 13 470 3 433 8.83e-43 157
Msa0378360 MtrunA17_Chr6g0459031 30.217 460 279 12 24 474 2 428 5.10e-40 149
Msa0378360 MtrunA17_Chr7g0230011 28.664 464 294 10 17 474 11 443 9.95e-40 149
Msa0378360 MtrunA17_Chr6g0458921 29.268 451 272 10 34 474 15 428 1.18e-39 148
Msa0378360 MtrunA17_Chr1g0198541 28.665 457 268 10 29 470 20 433 5.13e-39 146
Msa0378360 MtrunA17_Chr4g0027241 27.004 474 284 14 27 475 25 461 1.81e-37 142
Msa0378360 MtrunA17_Chr3g0103261 49.600 125 63 0 26 150 16 140 4.50e-37 134
Msa0378360 MtrunA17_Chr3g0077651 29.754 447 278 10 34 474 53 469 1.53e-36 140
Msa0378360 MtrunA17_Chr6g0459021 27.615 478 304 13 5 474 4 447 4.69e-36 138
Msa0378360 MtrunA17_Chr1g0206841 62.105 95 36 0 20 114 8 102 9.36e-36 128
Msa0378360 MtrunA17_Chr2g0328081 28.696 460 286 10 24 474 2 428 1.87e-35 136
Msa0378360 MtrunA17_Chr3g0122921 26.471 476 293 14 4 474 5 428 3.34e-35 135
Msa0378360 MtrunA17_Chr6g0459011 29.343 426 261 11 49 468 1 392 1.64e-34 133
Msa0378360 MtrunA17_Chr8g0387941 26.501 483 304 17 7 476 6 450 6.12e-34 132
Msa0378360 MtrunA17_Chr1g0206861 52.500 120 56 1 20 138 8 127 1.19e-33 124
Msa0378360 MtrunA17_Chr6g0459001 27.383 493 295 12 27 474 2 476 1.04e-32 129
Msa0378360 MtrunA17_Chr1g0198081 26.966 445 280 16 44 476 70 481 1.49e-32 129
Msa0378360 MtrunA17_Chr1g0146351 54.369 103 46 1 43 145 13 114 1.95e-30 114
Msa0378360 MtrunA17_Chr4g0038711 25.104 482 316 16 11 472 45 501 2.27e-29 120
Msa0378360 MtrunA17_Chr3g0143701 25.216 464 282 14 27 464 75 499 1.54e-28 118
Msa0378360 MtrunA17_Chr5g0406351 23.810 462 306 12 19 465 93 523 2.69e-23 102
Msa0378360 MtrunA17_Chr5g0436281 25.962 416 267 14 64 475 4 382 6.40e-23 100
Msa0378360 MtrunA17_Chr5g0406331 23.341 437 286 12 20 440 73 476 7.23e-21 95.5
Msa0378360 MtrunA17_Chr2g0281341 24.845 483 290 18 19 472 81 519 4.24e-18 87.0
Msa0378360 MtrunA17_Chr4g0058161 22.353 425 271 12 64 475 71 449 6.89e-16 79.7
Msa0378360 MtrunA17_Chr1g0159751 42.683 82 40 1 276 357 1 75 2.46e-15 70.9
Msa0378360 MtrunA17_Chr3g0112971 24.059 478 290 18 22 475 7 435 1.02e-14 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0378360 AT5G09220.1 64.819 469 161 2 13 477 25 493 0.0 656
Msa0378360 AT1G77380.1 65.517 464 157 1 17 477 13 476 0.0 649
Msa0378360 AT5G63850.1 64.912 456 156 2 26 477 11 466 0.0 642
Msa0378360 AT1G44100.1 59.158 475 184 4 12 477 7 480 0.0 610
Msa0378360 AT5G49630.1 56.798 456 191 4 26 475 25 480 0.0 528
Msa0378360 AT1G10010.1 53.642 453 206 2 27 475 21 473 0.0 526
Msa0378360 AT1G10010.2 53.642 453 206 2 27 475 22 474 0.0 526
Msa0378360 AT1G58360.1 53.145 461 211 3 22 477 24 484 0.0 524
Msa0378360 AT5G23810.1 47.748 444 216 6 7 442 5 440 8.23e-137 402
Msa0378360 AT5G23810.2 48.538 342 165 5 7 345 5 338 4.37e-101 307
Msa0378360 AT5G23810.4 46.586 249 124 4 18 263 14 256 1.54e-67 218
Msa0378360 AT5G23810.5 45.972 211 105 4 7 214 5 209 1.47e-53 180
Msa0378360 AT5G23810.3 45.972 211 105 4 7 214 5 209 1.47e-53 180
Msa0378360 AT1G48640.1 29.325 474 294 12 7 474 15 453 2.74e-47 170
Msa0378360 AT5G40780.1 29.663 445 277 10 34 474 34 446 2.60e-46 167
Msa0378360 AT1G67640.1 29.736 454 280 11 28 474 20 441 1.33e-42 157
Msa0378360 AT5G40780.3 29.535 430 267 10 49 474 1 398 1.95e-42 155
Msa0378360 AT5G40780.2 29.535 430 267 10 49 474 1 398 1.95e-42 155
Msa0378360 AT1G61270.1 27.193 456 293 12 22 469 19 443 7.11e-41 152
Msa0378360 AT1G24400.1 28.510 463 274 15 28 474 20 441 9.89e-41 152
Msa0378360 AT3G01760.1 25.214 468 306 11 16 468 3 441 8.92e-40 149
Msa0378360 AT1G25530.1 28.477 453 270 11 32 471 26 437 6.93e-37 141
Msa0378360 AT1G71680.1 27.423 485 291 14 7 474 8 448 9.68e-35 135
Msa0378360 AT1G08230.2 29.231 455 279 14 33 475 27 450 1.63e-32 129
Msa0378360 AT1G71680.2 28.532 361 211 12 7 350 8 338 3.04e-30 121
Msa0378360 AT5G41800.1 25.219 456 297 12 33 476 26 449 4.72e-26 110
Msa0378360 AT1G08230.4 30.745 322 193 9 163 475 31 331 2.63e-24 103
Msa0378360 AT1G08230.6 30.745 322 193 9 163 475 31 331 2.63e-24 103
Msa0378360 AT1G08230.5 30.745 322 193 9 163 475 31 331 2.63e-24 103
Msa0378360 AT1G08230.3 30.745 322 193 9 163 475 50 350 3.18e-24 103
Msa0378360 AT2G39890.2 24.519 416 273 14 64 475 63 441 2.44e-21 96.7
Msa0378360 AT2G39890.1 24.519 416 273 14 64 475 63 441 2.44e-21 96.7
Msa0378360 AT2G39890.3 24.519 416 273 14 64 475 4 382 3.17e-21 95.9
Msa0378360 AT2G36590.1 24.632 475 309 17 9 475 2 435 5.83e-21 95.5
Msa0378360 AT3G55740.1 24.940 417 270 13 64 475 60 438 1.03e-20 94.7
Msa0378360 AT3G55740.2 25.120 418 268 14 64 475 4 382 1.27e-20 94.0
Msa0378360 AT3G55740.3 25.120 418 268 14 64 475 4 382 1.27e-20 94.0
Msa0378360 AT1G47670.1 24.895 474 301 15 19 472 79 517 2.93e-18 87.8
Msa0378360 AT4G35180.1 23.529 459 292 13 34 473 58 476 2.59e-16 81.6
Msa0378360 AT4G35180.2 25.271 277 187 5 33 305 57 317 2.73e-13 71.2
Msa0378360 AT2G36590.2 24.332 337 224 12 9 340 2 312 9.82e-12 66.6

Find 113 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCATTTAGAACTCCATTT+TGG 0.108522 3_1:+79120293 None:intergenic
GTTCAGTACTTGTATCTTTA+TGG 0.129160 3_1:-79122148 Msa0378360:CDS
TCCTTTCTTTAATGATGTTC+TGG 0.137749 3_1:-79120393 Msa0378360:CDS
TTCTTGGAGCAGTGGGATTT+TGG 0.180772 3_1:-79120367 Msa0378360:CDS
AATGATGTTCTGGGATTTCT+TGG 0.212555 3_1:-79120383 Msa0378360:CDS
ACTGGATAATAAACTGTTAA+AGG 0.224075 3_1:+79120344 None:intergenic
TCAAATTCTCATTGAAATTC+AGG 0.231508 3_1:-79120918 Msa0378360:intron
CCATCGTCGTCGAAGTATTC+AGG 0.273974 3_1:+79123017 None:intergenic
TAAATCTATTTAGATTAGTT+TGG 0.281769 3_1:-79120460 Msa0378360:CDS
CCTTTCTTTAATGATGTTCT+GGG 0.306108 3_1:-79120392 Msa0378360:CDS
TCCCAAAATGGAGTTCTAAA+TGG 0.320619 3_1:-79120295 Msa0378360:CDS
TGAATGGCTTGTAATGCTTT+AGG 0.330057 3_1:+79120189 None:intergenic
TCCAGCTTGGCTCATCGATT+TGG 0.332874 3_1:-79120633 Msa0378360:CDS
TATCTTTATGGCAGTGCAAT+AGG 0.337033 3_1:-79122136 Msa0378360:CDS
ATAGCTGCAATAATGTCTTT+TGG 0.346313 3_1:-79121404 Msa0378360:CDS
AGCATGGGCTACGGCACAAT+TGG 0.349061 3_1:-79122636 Msa0378360:CDS
TCTAGATGTCTCCATTTATC+AGG 0.357700 3_1:-79121539 Msa0378360:CDS
AACGACGATAACCTGCTGTT+TGG 0.358251 3_1:+79121348 None:intergenic
AACCCATACATGATCAGTTT+TGG 0.359942 3_1:-79121488 Msa0378360:CDS
ATCAACTCACATCATGCTAA+TGG 0.372993 3_1:+79122096 None:intergenic
TTCTGAAGGGACACCATCTA+TGG 0.373125 3_1:+79123046 None:intergenic
TAATGTGTACCTGTTCGTTT+AGG 0.376426 3_1:+79122990 None:intergenic
TGCATGGGCTATGCTGCATT+TGG 0.377828 3_1:-79120701 Msa0378360:CDS
CTAAATAGATTTAGATTGTA+AGG 0.384304 3_1:+79120470 None:intergenic
GATGCAGTTCGTAGCATTCT+TGG 0.385053 3_1:-79122488 Msa0378360:intron
CATATAATAACAGCTGTGAT+TGG 0.385307 3_1:-79122677 Msa0378360:CDS
GTATCAGTTGTGGCTGCTCT+TGG 0.389248 3_1:-79120236 Msa0378360:CDS
CTTTAGGTCCTCTATAATAC+TGG 0.396377 3_1:+79120205 None:intergenic
GGGTTGGATTGGTGGTCCTT+TGG 0.399149 3_1:-79122615 Msa0378360:CDS
ATAACAGCTGTGATTGGGTC+TGG 0.401374 3_1:-79122671 Msa0378360:CDS
GTTATGAGTCAGGAACAATA+TGG 0.405471 3_1:-79122712 Msa0378360:intron
ACTCCAAAACTGATCATGTA+TGG 0.410066 3_1:+79121485 None:intergenic
CTGGGATTTCTTGGAGCAGT+GGG 0.412618 3_1:-79120374 Msa0378360:CDS
TGCAAAGGAAGATCCCAAAA+TGG 0.417168 3_1:-79120307 Msa0378360:CDS
ACGACGATAACCTGCTGTTT+GGG 0.418197 3_1:+79121349 None:intergenic
ACAAAGTGACGAGGCTGAAA+AGG 0.428865 3_1:+79122585 None:intergenic
TTATTTGCTTTGTGGCTGCA+TGG 0.440989 3_1:-79120717 Msa0378360:CDS
ACCTTCAAGGGTACTCTCAC+TGG 0.442148 3_1:-79121028 Msa0378360:CDS
AACAGAAAATGGTACCTTCA+AGG 0.444400 3_1:-79121041 Msa0378360:intron
AACCGGAGCCATTCCATAGA+TGG 0.448209 3_1:-79123059 Msa0378360:CDS
CTGGGGTGCTATCCTTAGCA+TGG 0.450709 3_1:-79122652 Msa0378360:CDS
GTCTTTGCCTTCGTAGAGAA+AGG 0.451734 3_1:-79120554 Msa0378360:CDS
TCAACTCACATCATGCTAAT+GGG 0.455025 3_1:+79122097 None:intergenic
AAGAAGAAATAGAAAGAAAC+CGG 0.458125 3_1:-79123076 Msa0378360:CDS
ACATTGCAACAAAAGTAGTT+AGG 0.463138 3_1:+79120420 None:intergenic
CTATTCCACAAACCGTGTAT+TGG 0.465036 3_1:+79122170 None:intergenic
GCATGGGCTACGGCACAATT+GGG 0.465627 3_1:-79122635 Msa0378360:CDS
TCCAGTGAGAGTACCCTTGA+AGG 0.465923 3_1:+79121027 None:intergenic
GCACAATTGGGTTGGATTGG+TGG 0.466018 3_1:-79122623 Msa0378360:CDS
TAAGGACGAAAACCCGGGAT+TGG 0.471537 3_1:+79120488 None:intergenic
GTCAACAACAACAAAATTGT+GGG 0.475137 3_1:-79120987 Msa0378360:CDS
GCCAAATCGATGAGCCAAGC+TGG 0.477067 3_1:+79120632 None:intergenic
GGGCGCCAATACACGGTTTG+TGG 0.479067 3_1:-79122175 Msa0378360:CDS
TATTTGCTTTGTGGCTGCAT+GGG 0.481138 3_1:-79120716 Msa0378360:CDS
TAGCTTCTCTTTCCATGCAC+AGG 0.488301 3_1:+79122521 None:intergenic
ATATAATAACAGCTGTGATT+GGG 0.488499 3_1:-79122676 Msa0378360:CDS
GGGCTACGGCACAATTGGGT+TGG 0.489975 3_1:-79122631 Msa0378360:CDS
TGCTGCTCCTTTCTCTACGA+AGG 0.498588 3_1:+79120547 None:intergenic
GCCGTCGTAATCCACCTTGT+GGG 0.501113 3_1:-79120602 Msa0378360:CDS
CCCAGAACATCATTAAAGAA+AGG 0.503059 3_1:+79120392 None:intergenic
GCACCAGGGAACTTGCTCAC+TGG 0.503377 3_1:-79120671 Msa0378360:CDS
TTCTCTACGAAGGCAAAGAC+AGG 0.507161 3_1:+79120557 None:intergenic
CTCAACCGCCAGTATTATAG+AGG 0.511484 3_1:-79120213 Msa0378360:CDS
ATGCTTTATTGTATCAGTTG+TGG 0.512651 3_1:-79120246 Msa0378360:CDS
GATGGTCGTCCTAAACGAAC+AGG 0.514219 3_1:-79122999 Msa0378360:intron
TTAGCAATTTCCCAAACAGC+AGG 0.515563 3_1:-79121359 Msa0378360:intron
TAACAGCTGTGATTGGGTCT+GGG 0.516920 3_1:-79122670 Msa0378360:CDS
ACAGAAAATGGTACCTTCAA+GGG 0.518566 3_1:-79121040 Msa0378360:intron
TGTCAACAACAACAAAATTG+TGG 0.522475 3_1:-79120988 Msa0378360:CDS
GATTGTAAGGACGAAAACCC+GGG 0.523575 3_1:+79120483 None:intergenic
GGAACACAAAATTCCAATCC+CGG 0.528501 3_1:-79120501 Msa0378360:CDS
GCATTTGGAGAACAAGCACC+AGG 0.529176 3_1:-79120686 Msa0378360:CDS
CACCATCTATGGAATGGCTC+CGG 0.534833 3_1:+79123057 None:intergenic
TGCCGTCGTAATCCACCTTG+TGG 0.547983 3_1:-79120603 Msa0378360:CDS
ACGGCACAATTGGGTTGGAT+TGG 0.551307 3_1:-79122626 Msa0378360:CDS
TATTCAGGATCAAGTTCTGA+AGG 0.553591 3_1:+79123032 None:intergenic
AAGATGGCCCCAAACAAAAG+TGG 0.554048 3_1:-79120522 Msa0378360:CDS
GCTCAATACTCTGAGCTGAA+TGG 0.555896 3_1:+79120173 None:intergenic
AGACAGGTTGAACATATACT+TGG 0.557340 3_1:+79120573 None:intergenic
TGCAGGCGGGCGCCAATACA+CGG 0.557733 3_1:-79122182 Msa0378360:intron
AGATTGTAAGGACGAAAACC+CGG 0.560505 3_1:+79120482 None:intergenic
CTCCAAAACTGATCATGTAT+GGG 0.563692 3_1:+79121486 None:intergenic
TCTGGGATTTCTTGGAGCAG+TGG 0.566045 3_1:-79120375 Msa0378360:CDS
AATCCAGTGAGCAAGTTCCC+TGG 0.566335 3_1:+79120668 None:intergenic
TTTAACAGTTTATTATCCAG+TGG 0.568524 3_1:-79120342 Msa0378360:CDS
TGCAAGATATACATCTCCAC+TGG 0.575990 3_1:+79120326 None:intergenic
TGGGGTGCTATCCTTAGCAT+GGG 0.576138 3_1:-79122651 Msa0378360:CDS
TTAGTATGTACAATCCAGCT+TGG 0.584076 3_1:-79120646 Msa0378360:CDS
AACAGCTGTGATTGGGTCTG+GGG 0.588270 3_1:-79122669 Msa0378360:CDS
GAACACAAAATTCCAATCCC+GGG 0.593016 3_1:-79120500 Msa0378360:CDS
AAGGGACACCATCTATGGAA+TGG 0.597405 3_1:+79123051 None:intergenic
CCTGAATACTTCGACGACGA+TGG 0.603286 3_1:-79123017 Msa0378360:CDS
TTGTGCCGTAGCCCATGCTA+AGG 0.606269 3_1:+79122640 None:intergenic
TGGAGATGTATATCTTGCAA+AGG 0.629124 3_1:-79120322 Msa0378360:CDS
TTGAGAGTATGAATAAGCAA+AGG 0.634614 3_1:+79120937 None:intergenic
AGATGTCTCCATTTATCAGG+AGG 0.634869 3_1:-79121536 Msa0378360:CDS
TAGGTCCTCTATAATACTGG+CGG 0.635831 3_1:+79120208 None:intergenic
CTAGCTGAATGTTATCGTTG+TGG 0.636182 3_1:-79122548 Msa0378360:CDS
CGTTGTGGAGATCCTGTGCA+TGG 0.641437 3_1:-79122533 Msa0378360:CDS
TTCCAGAGTTTCATAATACG+TGG 0.645176 3_1:-79121439 Msa0378360:CDS
CACCACGTATTATGAAACTC+TGG 0.648752 3_1:+79121437 None:intergenic
ATTCAGGATCAAGTTCTGAA+GGG 0.648974 3_1:+79123033 None:intergenic
TTCAAGGGTACTCTCACTGG+AGG 0.649496 3_1:-79121025 Msa0378360:CDS
GGGTTGCTTGACATGTGACA+TGG 0.650556 3_1:+79121506 None:intergenic
CTGAAAAGGATCATCACCAA+AGG 0.653603 3_1:+79122599 None:intergenic
TCAACAACAACAAAATTGTG+GGG 0.655949 3_1:-79120986 Msa0378360:CDS
GCTATCCTTAGCATGGGCTA+CGG 0.662463 3_1:-79122645 Msa0378360:CDS
CAGAGTTTCATAATACGTGG+TGG 0.670066 3_1:-79121436 Msa0378360:CDS
CTTGGTATGCTCCCACAAGG+TGG 0.675365 3_1:+79120591 None:intergenic
ATACTTGGTATGCTCCCACA+AGG 0.692310 3_1:+79120588 None:intergenic
ATGAAGTATACAAAGTGACG+AGG 0.719582 3_1:+79122576 None:intergenic
TCCCACAAGGTGGATTACGA+CGG 0.722373 3_1:+79120601 None:intergenic
CATTTGGAGAACAAGCACCA+GGG 0.723647 3_1:-79120685 Msa0378360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAATTAATT+CGG - chr3_1:79122160-79122179 Msa0378360:CDS 0.0%
!!! TTATATAATTTTACGTTAAA+TGG - chr3_1:79120301-79120320 Msa0378360:CDS 10.0%
!!! TTTTTTATGTCTAATTTTTA+TGG - chr3_1:79120477-79120496 Msa0378360:CDS 10.0%
!!! TTTTTATGTCTAATTTTTAT+GGG - chr3_1:79120478-79120497 Msa0378360:CDS 10.0%
!! AAAAAAAAAAAATTAATTCG+GGG - chr3_1:79122162-79122181 Msa0378360:CDS 10.0%
!!! TTTTAATTAAGATAAAGAAA+GGG + chr3_1:79122382-79122401 None:intergenic 10.0%
!!! ATTTTAATTAAGATAAAGAA+AGG + chr3_1:79122383-79122402 None:intergenic 10.0%
!!! AAAGCATGTATATTATTTTT+TGG - chr3_1:79120956-79120975 Msa0378360:CDS 15.0%
!! ATATATTAATTACCATTAGT+GGG - chr3_1:79121357-79121376 Msa0378360:intron 15.0%
!! AAAAAAAAAAAAACCATTGA+TGG - chr3_1:79121540-79121559 Msa0378360:CDS 15.0%
!!! TTGATGAGTTTATTTTAATT+TGG - chr3_1:79121676-79121695 Msa0378360:intron 15.0%
!!! TGATGAGTTTATTTTAATTT+GGG - chr3_1:79121677-79121696 Msa0378360:intron 15.0%
!!! TAAATCTATTTAGATTAGTT+TGG - chr3_1:79122798-79122817 Msa0378360:intron 15.0%
!!! TTAAATTTTCATTACTAGGA+GGG + chr3_1:79120512-79120531 None:intergenic 20.0%
!!! TGTGTTAAATTTTCATTACT+AGG + chr3_1:79120516-79120535 None:intergenic 20.0%
!!! TTTTTTTTTTGTTATGAGTC+AGG - chr3_1:79120536-79120555 Msa0378360:CDS 20.0%
!!! AATGTGTTTGTATTTAAGAT+CGG - chr3_1:79120889-79120908 Msa0378360:intron 20.0%
!! ATGCTTGTAAAAGATAATTA+CGG + chr3_1:79121196-79121215 None:intergenic 20.0%
!! GATATATTAATTACCATTAG+TGG - chr3_1:79121356-79121375 Msa0378360:intron 20.0%
!! ATAAGTATAACCTAAAAAGA+AGG - chr3_1:79121501-79121520 Msa0378360:CDS 20.0%
!! TCTTACTTCTATTATTGATA+GGG - chr3_1:79121634-79121653 Msa0378360:intron 20.0%
!!! ACTGATTTTTAAACAGAAAA+TGG - chr3_1:79122206-79122225 Msa0378360:intron 20.0%
!!! TATATATTTTTACTACACAC+AGG - chr3_1:79122439-79122458 Msa0378360:intron 20.0%
!!! ATTCTTCATCGTTTTTATTT+CGG + chr3_1:79122486-79122505 None:intergenic 20.0%
!! CTAAATAGATTTAGATTGTA+AGG + chr3_1:79122791-79122810 None:intergenic 20.0%
! AAGAAGAAATAGAAAGAAAC+CGG - chr3_1:79120182-79120201 Msa0378360:CDS 25.0%
! GAATTTCACAAGTTTACATT+TGG - chr3_1:79120395-79120414 Msa0378360:CDS 25.0%
!! GTTAAATTTTCATTACTAGG+AGG + chr3_1:79120513-79120532 None:intergenic 25.0%
! ATATAATAACAGCTGTGATT+GGG - chr3_1:79120582-79120601 Msa0378360:CDS 25.0%
! GATGTAATATTCTTAAGAGT+TGG - chr3_1:79121015-79121034 Msa0378360:CDS 25.0%
!! TAGTTTCAAACATAATTTGC+AGG - chr3_1:79121059-79121078 Msa0378360:intron 25.0%
! TGTAAAAGATAATTACGGTA+TGG + chr3_1:79121191-79121210 None:intergenic 25.0%
!! CAATATCAATCCTTCTTTTT+AGG + chr3_1:79121514-79121533 None:intergenic 25.0%
!!! ACATATTTTTGATCCATCAA+TGG + chr3_1:79121556-79121575 None:intergenic 25.0%
!! ACAAATGCTAATAGGTATTT+TGG + chr3_1:79121615-79121634 None:intergenic 25.0%
! GTCTTACTTCTATTATTGAT+AGG - chr3_1:79121633-79121652 Msa0378360:intron 25.0%
!!! TTTATTTTAATTTGGGTGAC+AGG - chr3_1:79121684-79121703 Msa0378360:intron 25.0%
!!! TTATTTTAATTTGGGTGACA+GGG - chr3_1:79121685-79121704 Msa0378360:intron 25.0%
! ATTCTTGATCATGTACTTTA+CGG - chr3_1:79122076-79122095 Msa0378360:intron 25.0%
! TCAAATTCTCATTGAAATTC+AGG - chr3_1:79122340-79122359 Msa0378360:intron 25.0%
! ACTGGATAATAAACTGTTAA+AGG + chr3_1:79122917-79122936 None:intergenic 25.0%
! TTTAACAGTTTATTATCCAG+TGG - chr3_1:79122916-79122935 Msa0378360:intron 25.0%
CATATAATAACAGCTGTGAT+TGG - chr3_1:79120581-79120600 Msa0378360:CDS 30.0%
! AAAGAGAAGCTATACTTTTG+TGG - chr3_1:79120748-79120767 Msa0378360:CDS 30.0%
! TTGCTTGTATTTAAGAGCAT+GGG + chr3_1:79120835-79120854 None:intergenic 30.0%
TTTGCTTGTATTTAAGAGCA+TGG + chr3_1:79120836-79120855 None:intergenic 30.0%
! TTTCAAACATAATTTGCAGG+CGG - chr3_1:79121062-79121081 Msa0378360:intron 30.0%
GTTCAGTACTTGTATCTTTA+TGG - chr3_1:79121110-79121129 Msa0378360:intron 30.0%
GAAGTAAGACAAATGCTAAT+AGG + chr3_1:79121623-79121642 None:intergenic 30.0%
! ATAGCTGCAATAATGTCTTT+TGG - chr3_1:79121854-79121873 Msa0378360:intron 30.0%
ATCAAACAATTGTACTCAAG+TGG - chr3_1:79122001-79122020 Msa0378360:intron 30.0%
! AGAACTTGGTTCTCTAAATT+TGG + chr3_1:79122040-79122059 None:intergenic 30.0%
TTACATCCAAAAGTAGAACT+TGG + chr3_1:79122054-79122073 None:intergenic 30.0%
!!! TGTTAACAGTCTCGTTTTTT+GGG + chr3_1:79122135-79122154 None:intergenic 30.0%
TGTCAACAACAACAAAATTG+TGG - chr3_1:79122270-79122289 Msa0378360:intron 30.0%
GTCAACAACAACAAAATTGT+GGG - chr3_1:79122271-79122290 Msa0378360:intron 30.0%
TCAACAACAACAAAATTGTG+GGG - chr3_1:79122272-79122291 Msa0378360:intron 30.0%
! TTGAGAGTATGAATAAGCAA+AGG + chr3_1:79122324-79122343 None:intergenic 30.0%
!! TTCATCGTTTTTATTTCGGA+TGG + chr3_1:79122482-79122501 None:intergenic 30.0%
!! ACAGCATTTTATTTGCTTTG+TGG - chr3_1:79122533-79122552 Msa0378360:CDS 30.0%
!! TTTGTGTTCCACTTTTGTTT+GGG + chr3_1:79122747-79122766 None:intergenic 30.0%
!! TTTTGTGTTCCACTTTTGTT+TGG + chr3_1:79122748-79122767 None:intergenic 30.0%
ACATTGCAACAAAAGTAGTT+AGG + chr3_1:79122841-79122860 None:intergenic 30.0%
TCCTTTCTTTAATGATGTTC+TGG - chr3_1:79122865-79122884 Msa0378360:intron 30.0%
CCTTTCTTTAATGATGTTCT+GGG - chr3_1:79122866-79122885 Msa0378360:intron 30.0%
!! TCCATTTAGAACTCCATTTT+GGG + chr3_1:79122967-79122986 None:intergenic 30.0%
!! ATCCATTTAGAACTCCATTT+TGG + chr3_1:79122968-79122987 None:intergenic 30.0%
!!! GAGTTCTAAATGGATTTTGT+TGG - chr3_1:79122973-79122992 Msa0378360:intron 30.0%
! ATGCTTTATTGTATCAGTTG+TGG - chr3_1:79123012-79123031 Msa0378360:CDS 30.0%
!! ATTCAGGATCAAGTTCTGAA+GGG + chr3_1:79120228-79120247 None:intergenic 35.0%
! TATTCAGGATCAAGTTCTGA+AGG + chr3_1:79120229-79120248 None:intergenic 35.0%
TAATGTGTACCTGTTCGTTT+AGG + chr3_1:79120271-79120290 None:intergenic 35.0%
GTTATGAGTCAGGAACAATA+TGG - chr3_1:79120546-79120565 Msa0378360:CDS 35.0%
ATGAAGTATACAAAGTGACG+AGG + chr3_1:79120685-79120704 None:intergenic 35.0%
! TTCAAACATAATTTGCAGGC+GGG - chr3_1:79121063-79121082 Msa0378360:intron 35.0%
TATCTTTATGGCAGTGCAAT+AGG - chr3_1:79121122-79121141 Msa0378360:intron 35.0%
TCAACTCACATCATGCTAAT+GGG + chr3_1:79121164-79121183 None:intergenic 35.0%
ATCAACTCACATCATGCTAA+TGG + chr3_1:79121165-79121184 None:intergenic 35.0%
!! TTGTTCTAAAGACCCACTAA+TGG + chr3_1:79121372-79121391 None:intergenic 35.0%
TCTAGATGTCTCCATTTATC+AGG - chr3_1:79121719-79121738 Msa0378360:intron 35.0%
! GATCTTTTCCTCCTGATAAA+TGG + chr3_1:79121733-79121752 None:intergenic 35.0%
! AACCCATACATGATCAGTTT+TGG - chr3_1:79121770-79121789 Msa0378360:intron 35.0%
CTCCAAAACTGATCATGTAT+GGG + chr3_1:79121775-79121794 None:intergenic 35.0%
ACTCCAAAACTGATCATGTA+TGG + chr3_1:79121776-79121795 None:intergenic 35.0%
TTCCAGAGTTTCATAATACG+TGG - chr3_1:79121819-79121838 Msa0378360:intron 35.0%
! AGAGAACCAAGTTCTACTTT+TGG - chr3_1:79122045-79122064 Msa0378360:intron 35.0%
!!! GTTAACAGTCTCGTTTTTTG+GGG + chr3_1:79122134-79122153 None:intergenic 35.0%
!!! GTGTTAACAGTCTCGTTTTT+TGG + chr3_1:79122136-79122155 None:intergenic 35.0%
AACAGAAAATGGTACCTTCA+AGG - chr3_1:79122217-79122236 Msa0378360:intron 35.0%
ACAGAAAATGGTACCTTCAA+GGG - chr3_1:79122218-79122237 Msa0378360:intron 35.0%
!! ATCGTTTTTATTTCGGATGG+TGG + chr3_1:79122479-79122498 None:intergenic 35.0%
TTAGTATGTACAATCCAGCT+TGG - chr3_1:79122612-79122631 Msa0378360:CDS 35.0%
! AGACAGGTTGAACATATACT+TGG + chr3_1:79122688-79122707 None:intergenic 35.0%
!! TTGTGTTCCACTTTTGTTTG+GGG + chr3_1:79122746-79122765 None:intergenic 35.0%
CCCAGAACATCATTAAAGAA+AGG + chr3_1:79122869-79122888 None:intergenic 35.0%
!! AATGATGTTCTGGGATTTCT+TGG - chr3_1:79122875-79122894 Msa0378360:intron 35.0%
TGGAGATGTATATCTTGCAA+AGG - chr3_1:79122936-79122955 Msa0378360:intron 35.0%
!! TCCCAAAATGGAGTTCTAAA+TGG - chr3_1:79122963-79122982 Msa0378360:intron 35.0%
CTTTAGGTCCTCTATAATAC+TGG + chr3_1:79123056-79123075 None:intergenic 35.0%
! TGAATGGCTTGTAATGCTTT+AGG + chr3_1:79123072-79123091 None:intergenic 35.0%
!! GTGTCGATCTTTTGTCTTCT+TGG - chr3_1:79120417-79120436 Msa0378360:CDS 40.0%
CTGAAAAGGATCATCACCAA+AGG + chr3_1:79120662-79120681 None:intergenic 40.0%
CTAGCTGAATGTTATCGTTG+TGG - chr3_1:79120710-79120729 Msa0378360:CDS 40.0%
CTATTCCACAAACCGTGTAT+TGG + chr3_1:79121091-79121110 None:intergenic 40.0%
AGATGTCTCCATTTATCAGG+AGG - chr3_1:79121722-79121741 Msa0378360:intron 40.0%
CACCACGTATTATGAAACTC+TGG + chr3_1:79121824-79121843 None:intergenic 40.0%
CAGAGTTTCATAATACGTGG+TGG - chr3_1:79121822-79121841 Msa0378360:intron 40.0%
!! TCTTTTGGCTATTCCACAGT+TGG - chr3_1:79121869-79121888 Msa0378360:intron 40.0%
TTAGCAATTTCCCAAACAGC+AGG - chr3_1:79121899-79121918 Msa0378360:intron 40.0%
!!! TGGGGAATTTTTCAAGCTCT+TGG - chr3_1:79122290-79122309 Msa0378360:intron 40.0%
TTATTTGCTTTGTGGCTGCA+TGG - chr3_1:79122541-79122560 Msa0378360:CDS 40.0%
TATTTGCTTTGTGGCTGCAT+GGG - chr3_1:79122542-79122561 Msa0378360:CDS 40.0%
AGAAAGGAGCAGCAAAAAGA+TGG - chr3_1:79122720-79122739 Msa0378360:intron 40.0%
GGAACACAAAATTCCAATCC+CGG - chr3_1:79122757-79122776 Msa0378360:intron 40.0%
GAACACAAAATTCCAATCCC+GGG - chr3_1:79122758-79122777 Msa0378360:intron 40.0%
AGATTGTAAGGACGAAAACC+CGG + chr3_1:79122779-79122798 None:intergenic 40.0%
TGCAAGATATACATCTCCAC+TGG + chr3_1:79122935-79122954 None:intergenic 40.0%
TGCAAAGGAAGATCCCAAAA+TGG - chr3_1:79122951-79122970 Msa0378360:intron 40.0%
TAGGTCCTCTATAATACTGG+CGG + chr3_1:79123053-79123072 None:intergenic 40.0%
AAGGGACACCATCTATGGAA+TGG + chr3_1:79120210-79120229 None:intergenic 45.0%
! TTCTGAAGGGACACCATCTA+TGG + chr3_1:79120215-79120234 None:intergenic 45.0%
ATAACAGCTGTGATTGGGTC+TGG - chr3_1:79120587-79120606 Msa0378360:CDS 45.0%
TAACAGCTGTGATTGGGTCT+GGG - chr3_1:79120588-79120607 Msa0378360:CDS 45.0%
ACAAAGTGACGAGGCTGAAA+AGG + chr3_1:79120676-79120695 None:intergenic 45.0%
TAGCTTCTCTTTCCATGCAC+AGG + chr3_1:79120740-79120759 None:intergenic 45.0%
GATGCAGTTCGTAGCATTCT+TGG - chr3_1:79120770-79120789 Msa0378360:CDS 45.0%
TGCTAAAAAGACGCCAACTG+TGG + chr3_1:79121885-79121904 None:intergenic 45.0%
! ACGACGATAACCTGCTGTTT+GGG + chr3_1:79121912-79121931 None:intergenic 45.0%
AACGACGATAACCTGCTGTT+TGG + chr3_1:79121913-79121932 None:intergenic 45.0%
!!! CAGTCTCGTTTTTTGGGGAA+AGG + chr3_1:79122129-79122148 None:intergenic 45.0%
CATTTGGAGAACAAGCACCA+GGG - chr3_1:79122573-79122592 Msa0378360:CDS 45.0%
ATACTTGGTATGCTCCCACA+AGG + chr3_1:79122673-79122692 None:intergenic 45.0%
TTCTCTACGAAGGCAAAGAC+AGG + chr3_1:79122704-79122723 None:intergenic 45.0%
GTCTTTGCCTTCGTAGAGAA+AGG - chr3_1:79122704-79122723 Msa0378360:intron 45.0%
AAGATGGCCCCAAACAAAAG+TGG - chr3_1:79122736-79122755 Msa0378360:intron 45.0%
GATTGTAAGGACGAAAACCC+GGG + chr3_1:79122778-79122797 None:intergenic 45.0%
! TTCTTGGAGCAGTGGGATTT+TGG - chr3_1:79122891-79122910 Msa0378360:intron 45.0%
CTCAACCGCCAGTATTATAG+AGG - chr3_1:79123045-79123064 Msa0378360:CDS 45.0%
!! AAAAAAAAAAAAATTAATTC+GGG - chr3_1:79122161-79122180 Msa0378360:CDS 5.0%
AACCGGAGCCATTCCATAGA+TGG - chr3_1:79120199-79120218 Msa0378360:CDS 50.0%
CACCATCTATGGAATGGCTC+CGG + chr3_1:79120204-79120223 None:intergenic 50.0%
! CCATCGTCGTCGAAGTATTC+AGG + chr3_1:79120244-79120263 None:intergenic 50.0%
CCTGAATACTTCGACGACGA+TGG - chr3_1:79120241-79120260 Msa0378360:CDS 50.0%
GATGGTCGTCCTAAACGAAC+AGG - chr3_1:79120259-79120278 Msa0378360:CDS 50.0%
AACAGCTGTGATTGGGTCTG+GGG - chr3_1:79120589-79120608 Msa0378360:CDS 50.0%
! TGGGGTGCTATCCTTAGCAT+GGG - chr3_1:79120607-79120626 Msa0378360:CDS 50.0%
! GCTATCCTTAGCATGGGCTA+CGG - chr3_1:79120613-79120632 Msa0378360:CDS 50.0%
!! ACGGCACAATTGGGTTGGAT+TGG - chr3_1:79120632-79120651 Msa0378360:CDS 50.0%
!! GCACAATTGGGTTGGATTGG+TGG - chr3_1:79120635-79120654 Msa0378360:CDS 50.0%
GGGTTGCTTGACATGTGACA+TGG + chr3_1:79121755-79121774 None:intergenic 50.0%
ACGGTAACTCGAACGAACTC+AGG - chr3_1:79122095-79122114 Msa0378360:intron 50.0%
!! ACCTTCAAGGGTACTCTCAC+TGG - chr3_1:79122230-79122249 Msa0378360:intron 50.0%
!! TCCAGTGAGAGTACCCTTGA+AGG + chr3_1:79122234-79122253 None:intergenic 50.0%
!! TTCAAGGGTACTCTCACTGG+AGG - chr3_1:79122233-79122252 Msa0378360:intron 50.0%
! TGCATGGGCTATGCTGCATT+TGG - chr3_1:79122557-79122576 Msa0378360:CDS 50.0%
GCATTTGGAGAACAAGCACC+AGG - chr3_1:79122572-79122591 Msa0378360:CDS 50.0%
AATCCAGTGAGCAAGTTCCC+TGG + chr3_1:79122593-79122612 None:intergenic 50.0%
! TCCAGCTTGGCTCATCGATT+TGG - chr3_1:79122625-79122644 Msa0378360:CDS 50.0%
!! TCCCACAAGGTGGATTACGA+CGG + chr3_1:79122660-79122679 None:intergenic 50.0%
TGCTGCTCCTTTCTCTACGA+AGG + chr3_1:79122714-79122733 None:intergenic 50.0%
TAAGGACGAAAACCCGGGAT+TGG + chr3_1:79122773-79122792 None:intergenic 50.0%
! TCTGGGATTTCTTGGAGCAG+TGG - chr3_1:79122883-79122902 Msa0378360:intron 50.0%
CTGGGATTTCTTGGAGCAGT+GGG - chr3_1:79122884-79122903 Msa0378360:intron 50.0%
GTATCAGTTGTGGCTGCTCT+TGG - chr3_1:79123022-79123041 Msa0378360:CDS 50.0%
! CTGGGGTGCTATCCTTAGCA+TGG - chr3_1:79120606-79120625 Msa0378360:CDS 55.0%
TTGTGCCGTAGCCCATGCTA+AGG + chr3_1:79120621-79120640 None:intergenic 55.0%
! AGCATGGGCTACGGCACAAT+TGG - chr3_1:79120622-79120641 Msa0378360:CDS 55.0%
! GCATGGGCTACGGCACAATT+GGG - chr3_1:79120623-79120642 Msa0378360:CDS 55.0%
!! GGGTTGGATTGGTGGTCCTT+TGG - chr3_1:79120643-79120662 Msa0378360:CDS 55.0%
CGTTGTGGAGATCCTGTGCA+TGG - chr3_1:79120725-79120744 Msa0378360:CDS 55.0%
GCCAAATCGATGAGCCAAGC+TGG + chr3_1:79122629-79122648 None:intergenic 55.0%
TGCCGTCGTAATCCACCTTG+TGG - chr3_1:79122655-79122674 Msa0378360:CDS 55.0%
GCCGTCGTAATCCACCTTGT+GGG - chr3_1:79122656-79122675 Msa0378360:CDS 55.0%
CTTGGTATGCTCCCACAAGG+TGG + chr3_1:79122670-79122689 None:intergenic 55.0%
GGGCTACGGCACAATTGGGT+TGG - chr3_1:79120627-79120646 Msa0378360:CDS 60.0%
GGGCGCCAATACACGGTTTG+TGG - chr3_1:79121083-79121102 Msa0378360:intron 60.0%
! GCACCAGGGAACTTGCTCAC+TGG - chr3_1:79122587-79122606 Msa0378360:CDS 60.0%
TGCAGGCGGGCGCCAATACA+CGG - chr3_1:79121076-79121095 Msa0378360:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 79120175 79123105 79120175 ID=Msa0378360;Name=Msa0378360
chr3_1 mRNA 79120175 79123105 79120175 ID=Msa0378360-mRNA-1;Parent=Msa0378360;Name=Msa0378360-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|6|0|477
chr3_1 exon 79123000 79123105 79123000 ID=Msa0378360-mRNA-1:exon:19326;Parent=Msa0378360-mRNA-1
chr3_1 exon 79122489 79122722 79122489 ID=Msa0378360-mRNA-1:exon:19325;Parent=Msa0378360-mRNA-1
chr3_1 exon 79122106 79122199 79122106 ID=Msa0378360-mRNA-1:exon:19324;Parent=Msa0378360-mRNA-1
chr3_1 exon 79121360 79121574 79121360 ID=Msa0378360-mRNA-1:exon:19323;Parent=Msa0378360-mRNA-1
chr3_1 exon 79120919 79121058 79120919 ID=Msa0378360-mRNA-1:exon:19322;Parent=Msa0378360-mRNA-1
chr3_1 exon 79120175 79120819 79120175 ID=Msa0378360-mRNA-1:exon:19321;Parent=Msa0378360-mRNA-1
chr3_1 CDS 79123000 79123105 79123000 ID=Msa0378360-mRNA-1:cds;Parent=Msa0378360-mRNA-1
chr3_1 CDS 79122489 79122722 79122489 ID=Msa0378360-mRNA-1:cds;Parent=Msa0378360-mRNA-1
chr3_1 CDS 79122106 79122199 79122106 ID=Msa0378360-mRNA-1:cds;Parent=Msa0378360-mRNA-1
chr3_1 CDS 79121360 79121574 79121360 ID=Msa0378360-mRNA-1:cds;Parent=Msa0378360-mRNA-1
chr3_1 CDS 79120919 79121058 79120919 ID=Msa0378360-mRNA-1:cds;Parent=Msa0378360-mRNA-1
chr3_1 CDS 79120175 79120819 79120175 ID=Msa0378360-mRNA-1:cds;Parent=Msa0378360-mRNA-1
Gene Sequence

>Msa0378360

ATGTTGAAAGAAGAAATAGAAAGAAACCGGAGCCATTCCATAGATGGTGTCCCTTCAGAACTTGATCCTGAATACTTCGACGACGATGGTCGTCCTAAACGAACAGGAACAATATGGACAACAAGTTCTCATATAATAACAGCTGTGATTGGGTCTGGGGTGCTATCCTTAGCATGGGCTACGGCACAATTGGGTTGGATTGGTGGTCCTTTGGTGATGATCCTTTTCAGCCTCGTCACTTTGTATACTTCATCAATGCTAGCTGAATGTTATCGTTGTGGAGATCCTGTGCATGGAAAGAGAAGCTATACTTTTGTGGATGCAGTTCGTAGCATTCTTGGCGGGCGCCAATACACGGTTTGTGGAATAGTTCAGTACTTGTATCTTTATGGCAGTGCAATAGGATACTCGATTGCAGCTCCCATTAGCATGATGGAAATAAACAAGTCTAGATGTCTCCATTTATCAGGAGGAAAAGATCCATGTCACATGTCAAGCAACCCATACATGATCAGTTTTGGAGTAATCGAAATTTTCGTTTCTCAAATTCCAGAGTTTCATAATACGTGGTGGCTCTCAGTAATAGCTGCAATAATGTCTTTTGGCTATTCCACAGTTGGCGTCTTTTTAGCAATTTCCCAAACAGCAGAAAATGGTACCTTCAAGGGTACTCTCACTGGAGGAAGCACTGAAGATGTGTCAACAACAACAAAATTGTGGGGAATTTTTCAAGCTCTTGGTGACATAGCCTTTGCTTATTCATACTCTCAAATTCTCATTGAAATTCAGGACACTATAAAAAGTCCACCATCCGAAATAAAAACGATGAAGAATGCAGCAGCTTTAAGTGTTGCTGTCACTACAGCATTTTATTTGCTTTGTGGCTGCATGGGCTATGCTGCATTTGGAGAACAAGCACCAGGGAACTTGCTCACTGGATTTAGTATGTACAATCCAGCTTGGCTCATCGATTTGGCGAATGCTGCCGTCGTAATCCACCTTGTGGGAGCATACCAAGTATATGTTCAACCTGTCTTTGCCTTCGTAGAGAAAGGAGCAGCAAAAAGATGGCCCCAAACAAAAGTGGAACACAAAATTCCAATCCCGGGTTTTCGTCCTTACAATCTAAATCTATTTAGATTAGTTTGGAGAACAGTATTTATGATCCTAACTACTTTTGTTGCAATGTTGATTCCTTTCTTTAATGATGTTCTGGGATTTCTTGGAGCAGTGGGATTTTGGCCTTTAACAGTTTATTATCCAGTGGAGATGTATATCTTGCAAAGGAAGATCCCAAAATGGAGTTCTAAATGGATTTTGTTGGAAATCATAAGTGTTATATGCTTTATTGTATCAGTTGTGGCTGCTCTTGGCTCAACCGCCAGTATTATAGAGGACCTAAAGCATTACAAGCCATTCAGCTCAGAGTATTGA
Protein sequence

>Msa0378360

MLKEEIERNRSHSIDGVPSELDPEYFDDDGRPKRTGTIWTTSSHIITAVIGSGVLSLAWATAQLGWIGGPLVMILFSLVTLYTSSMLAECYRCGDPVHGKRSYTFVDAVRSILGGRQYTVCGIVQYLYLYGSAIGYSIAAPISMMEINKSRCLHLSGGKDPCHMSSNPYMISFGVIEIFVSQIPEFHNTWWLSVIAAIMSFGYSTVGVFLAISQTAENGTFKGTLTGGSTEDVSTTTKLWGIFQALGDIAFAYSYSQILIEIQDTIKSPPSEIKTMKNAAALSVAVTTAFYLLCGCMGYAAFGEQAPGNLLTGFSMYNPAWLIDLANAAVVIHLVGAYQVYVQPVFAFVEKGAAKRWPQTKVEHKIPIPGFRPYNLNLFRLVWRTVFMILTTFVAMLIPFFNDVLGFLGAVGFWPLTVYYPVEMYILQRKIPKWSSKWILLEIISVICFIVSVVAALGSTASIIEDLKHYKPFSSEY*