Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa0306460 | 0.961003 | 3.354144e-119 | -8.615850e-47 |
| Msa0016570 | Msa0306460 | 0.914119 | 2.785096e-84 | -8.615850e-47 |
| Msa0016580 | Msa0306460 | 0.891071 | 5.551950e-74 | -8.615850e-47 |
| Msa0064970 | Msa0306460 | 0.808126 | 3.609042e-50 | -8.615850e-47 |
| Msa0102070 | Msa0306460 | 0.848626 | 5.436735e-60 | -8.615850e-47 |
| Msa0110260 | Msa0306460 | 0.829345 | 5.421981e-55 | -8.615850e-47 |
| Msa0110270 | Msa0306460 | 0.880777 | 4.148933e-70 | -8.615850e-47 |
| Msa0111510 | Msa0306460 | 0.812330 | 4.475915e-51 | -8.615850e-47 |
| Msa0123810 | Msa0306460 | 0.825885 | 3.672156e-54 | -8.615850e-47 |
| Msa0124100 | Msa0306460 | 0.805927 | 1.053734e-49 | -8.615850e-47 |
| Msa0142220 | Msa0306460 | 0.858779 | 6.519102e-63 | -8.615850e-47 |
| Msa0145750 | Msa0306460 | 0.803417 | 3.521868e-49 | -8.615850e-47 |
| Msa0153910 | Msa0306460 | 0.823307 | 1.486319e-53 | -8.615850e-47 |
| Msa0165190 | Msa0306460 | 0.802563 | 5.286723e-49 | -8.615850e-47 |
| Msa0192970 | Msa0306460 | 0.806542 | 7.822304e-50 | -8.615850e-47 |
| Msa0200000 | Msa0306460 | 0.821805 | 3.320422e-53 | -8.615850e-47 |
| Msa0227480 | Msa0306460 | 0.842438 | 2.586410e-58 | -8.615850e-47 |
| Msa0231000 | Msa0306460 | 0.808885 | 2.485365e-50 | -8.615850e-47 |
| Msa0232850 | Msa0306460 | 0.850893 | 1.264938e-60 | -8.615850e-47 |
| Msa0235140 | Msa0306460 | 0.802160 | 6.399388e-49 | -8.615850e-47 |
| Msa0266720 | Msa0306460 | 0.811551 | 6.617265e-51 | -8.615850e-47 |
| Msa0267000 | Msa0306460 | 0.841320 | 5.102816e-58 | -8.615850e-47 |
| Msa0267010 | Msa0306460 | 0.857947 | 1.153025e-62 | -8.615850e-47 |
| Msa0270520 | Msa0306460 | 0.848094 | 7.627462e-60 | -8.615850e-47 |
| Msa0304170 | Msa0306460 | 0.936092 | 3.014923e-97 | -8.615850e-47 |
| Msa0306460 | Msa0309020 | 0.823385 | 1.425386e-53 | -8.615850e-47 |
| Msa0306460 | Msa0342240 | 0.871182 | 8.303877e-67 | -8.615850e-47 |
| Msa0306460 | Msa0360510 | 0.853584 | 2.169075e-61 | -8.615850e-47 |
| Msa0306460 | Msa0365500 | 0.804355 | 2.247773e-49 | -8.615850e-47 |
| Msa0306460 | Msa0378360 | 0.801368 | 9.305282e-49 | -8.615850e-47 |
| Msa0306460 | Msa0384800 | 0.866463 | 2.799005e-65 | -8.615850e-47 |
| Msa0306460 | Msa0407750 | 0.808347 | 3.239216e-50 | -8.615850e-47 |
| Msa0306460 | Msa0414410 | 0.828085 | 1.093503e-54 | -8.615850e-47 |
| Msa0306460 | Msa0414420 | 0.862718 | 4.154986e-64 | -8.615850e-47 |
| Msa0306460 | Msa0436780 | 0.812604 | 3.899137e-51 | -8.615850e-47 |
| Msa0306460 | Msa0436800 | 0.812480 | 4.150124e-51 | -8.615850e-47 |
| Msa0306460 | Msa0438620 | 0.841370 | 4.953151e-58 | -8.615850e-47 |
| Msa0306460 | Msa0444130 | 0.871051 | 9.169962e-67 | -8.615850e-47 |
| Msa0306460 | Msa0450000 | 0.822531 | 2.254143e-53 | -8.615850e-47 |
| Msa0306460 | Msa0450570 | 0.806350 | 8.585137e-50 | -8.615850e-47 |
| Msa0306460 | Msa0452900 | 0.875740 | 2.428174e-68 | -8.615850e-47 |
| Msa0306460 | Msa0453120 | 0.850037 | 2.200109e-60 | -8.615850e-47 |
| Msa0306460 | Msa0454910 | 0.810463 | 1.138155e-50 | -8.615850e-47 |
| Msa0306460 | Msa0456840 | 0.802845 | 4.623810e-49 | -8.615850e-47 |
| Msa0306460 | Msa0459160 | 0.808693 | 2.732174e-50 | -8.615850e-47 |
| Msa0306460 | Msa0485370 | 0.801710 | 7.917613e-49 | -8.615850e-47 |
| Msa0306460 | Msa0491590 | 0.825667 | 4.137497e-54 | -8.615850e-47 |
| Msa0306460 | Msa0502760 | 0.830082 | 3.587978e-55 | -8.615850e-47 |
| Msa0306460 | Msa0506270 | 0.842022 | 3.332678e-58 | -8.615850e-47 |
| Msa0306460 | Msa0564890 | 0.836284 | 1.024038e-56 | -8.615850e-47 |
| Msa0306460 | Msa0596150 | 0.817423 | 3.323343e-52 | -8.615850e-47 |
| Msa0306460 | Msa0604350 | 0.829968 | 3.824965e-55 | -8.615850e-47 |
| Msa0306460 | Msa0636170 | 0.848036 | 7.916848e-60 | -8.615850e-47 |
| Msa0306460 | Msa0639610 | 0.823659 | 1.229827e-53 | -8.615850e-47 |
| Msa0306460 | Msa0678930 | 0.830490 | 2.851698e-55 | -8.615850e-47 |
| Msa0306460 | Msa0694370 | 0.831420 | 1.686278e-55 | -8.615850e-47 |
| Msa0306460 | Msa0726140 | 0.859114 | 5.172417e-63 | -8.615850e-47 |
| Msa0306460 | Msa0729800 | 0.844013 | 9.834272e-59 | -8.615850e-47 |
| Msa0306460 | Msa0732710 | 0.801791 | 7.622858e-49 | -8.615850e-47 |
| Msa0306460 | Msa0733290 | 0.824269 | 8.844064e-54 | -8.615850e-47 |
| Msa0306460 | Msa0741990 | 0.833073 | 6.574593e-56 | -8.615850e-47 |
| Msa0306460 | Msa0743810 | 0.888252 | 6.963960e-73 | -8.615850e-47 |
| Msa0306460 | Msa0745060 | 0.867090 | 1.767792e-65 | -8.615850e-47 |
| Msa0306460 | Msa0764960 | 0.832555 | 8.844156e-56 | -8.615850e-47 |
| Msa0306460 | Msa0766630 | 0.802020 | 6.840450e-49 | -8.615850e-47 |
| Msa0306460 | Msa0767720 | 0.876089 | 1.842098e-68 | -8.615850e-47 |
| Msa0306460 | Msa0775300 | 0.822223 | 2.657738e-53 | -8.615850e-47 |
| Msa0306460 | Msa0777870 | 0.801547 | 8.550868e-49 | -8.615850e-47 |
| Msa0306460 | Msa0783160 | 0.861130 | 1.273765e-63 | -8.615850e-47 |
| Msa0306460 | Msa0787600 | 0.836239 | 1.051215e-56 | -8.615850e-47 |
| Msa0306460 | Msa0789250 | 0.853448 | 2.373081e-61 | -8.615850e-47 |
| Msa0306460 | Msa0808010 | 0.812601 | 3.906553e-51 | -8.615850e-47 |
| Msa0306460 | Msa0808020 | 0.807554 | 4.775398e-50 | -8.615850e-47 |
| Msa0306460 | Msa0811080 | 0.891303 | 4.490826e-74 | -8.615850e-47 |
| Msa0306460 | Msa0811270 | 0.815330 | 9.772748e-52 | -8.615850e-47 |
| Msa0306460 | Msa0825860 | 0.857651 | 1.411137e-62 | -8.615850e-47 |
| Msa0306460 | Msa0846210 | 0.811069 | 8.417467e-51 | -8.615850e-47 |
| Msa0306460 | Msa0846330 | 0.829678 | 4.499647e-55 | -8.615850e-47 |
| Msa0306460 | Msa0846350 | 0.853221 | 2.757729e-61 | -8.615850e-47 |
| Msa0306460 | Msa0848060 | 0.817762 | 2.787010e-52 | -8.615850e-47 |
| Msa0306460 | Msa0858980 | 0.815781 | 7.754387e-52 | -8.615850e-47 |
| Msa0306460 | Msa0865320 | 0.851612 | 7.924821e-61 | -8.615850e-47 |
| Msa0306460 | Msa0885280 | 0.803725 | 3.039642e-49 | -8.615850e-47 |
| Msa0306460 | Msa0885290 | 0.824584 | 7.456419e-54 | -8.615850e-47 |
| Msa0306460 | Msa0888370 | 0.833485 | 5.192209e-56 | -8.615850e-47 |
| Msa0306460 | Msa0896080 | 0.816290 | 5.968139e-52 | -8.615850e-47 |
| Msa0306460 | Msa0907260 | 0.814960 | 1.180288e-51 | -8.615850e-47 |
| Msa0306460 | Msa0954020 | 0.807905 | 4.022689e-50 | -8.615850e-47 |
| Msa0306460 | Msa0954910 | 0.807072 | 6.042121e-50 | -8.615850e-47 |
| Msa0306460 | Msa0956270 | 0.810271 | 1.252657e-50 | -8.615850e-47 |
| Msa0306460 | Msa0957680 | 0.801099 | 1.056604e-48 | -8.615850e-47 |
| Msa0306460 | Msa0957860 | 0.801005 | 1.104348e-48 | -8.615850e-47 |
| Msa0306460 | Msa0957960 | 0.802135 | 6.477411e-49 | -8.615850e-47 |
| Msa0306460 | Msa0981370 | 0.814611 | 1.410492e-51 | -8.615850e-47 |
| Msa0306460 | Msa0989060 | 0.863533 | 2.326218e-64 | -8.615850e-47 |
| Msa0306460 | Msa1015810 | 0.810012 | 1.424174e-50 | -8.615850e-47 |
| Msa0306460 | Msa1016280 | 0.844351 | 7.975897e-59 | -8.615850e-47 |
| Msa0306460 | Msa1023010 | 0.816759 | 4.685427e-52 | -8.615850e-47 |
| Msa0306460 | Msa1024240 | 0.814550 | 1.454873e-51 | -8.615850e-47 |
| Msa0306460 | Msa1024370 | 0.834659 | 2.637240e-56 | -8.615850e-47 |
| Msa0306460 | Msa1025360 | 0.863854 | 1.849207e-64 | -8.615850e-47 |
| Msa0306460 | Msa1025370 | 0.844392 | 7.776709e-59 | -8.615850e-47 |
| Msa0306460 | Msa1030060 | 0.820788 | 5.700348e-53 | -8.615850e-47 |
| Msa0306460 | Msa1044830 | 0.846281 | 2.396687e-59 | -8.615850e-47 |
| Msa0306460 | Msa1044840 | 0.864932 | 8.513669e-65 | -8.615850e-47 |
| Msa0306460 | Msa1047550 | 0.808491 | 3.017553e-50 | -8.615850e-47 |
| Msa0306460 | Msa1071100 | 0.827993 | 1.150863e-54 | -8.615850e-47 |
| Msa0306460 | Msa1092990 | 0.880202 | 6.663638e-70 | -8.615850e-47 |
| Msa0306460 | Msa1099970 | 0.825926 | 3.590799e-54 | -8.615850e-47 |
| Msa0306460 | Msa1100980 | 0.859158 | 5.017841e-63 | -8.615850e-47 |
| Msa0306460 | Msa1104630 | 0.802605 | 5.182816e-49 | -8.615850e-47 |
| Msa0306460 | Msa1109440 | 0.826926 | 2.074625e-54 | -8.615850e-47 |
| Msa0306460 | Msa1111150 | 0.810742 | 9.906849e-51 | -8.615850e-47 |
| Msa0306460 | Msa1121200 | 0.812418 | 4.282049e-51 | -8.615850e-47 |
| Msa0306460 | Msa1135740 | 0.837209 | 5.947386e-57 | -8.615850e-47 |
| Msa0306460 | Msa1136090 | 0.811140 | 8.125239e-51 | -8.615850e-47 |
| Msa0306460 | Msa1146110 | 0.890487 | 9.424513e-74 | -8.615850e-47 |
| Msa0306460 | Msa1148020 | 0.858520 | 7.786688e-63 | -8.615850e-47 |
| Msa0306460 | Msa1150370 | 0.807391 | 5.172358e-50 | -8.615850e-47 |
| Msa0306460 | Msa1160670 | 0.814735 | 1.323985e-51 | -8.615850e-47 |
| Msa0306460 | Msa1187940 | 0.853995 | 1.652601e-61 | -8.615850e-47 |
| Msa0306460 | Msa1187950 | 0.871053 | 9.159394e-67 | -8.615850e-47 |
| Msa0306460 | Msa1192640 | 0.849426 | 3.257581e-60 | -8.615850e-47 |
| Msa0306460 | Msa1230430 | 0.801015 | 1.099091e-48 | -8.615850e-47 |
| Msa0306460 | Msa1246880 | 0.814357 | 1.605467e-51 | -8.615850e-47 |
| Msa0306460 | Msa1269670 | 0.862116 | 6.364921e-64 | -8.615850e-47 |
| Msa0306460 | Msa1270230 | 0.880860 | 3.873815e-70 | -8.615850e-47 |
| Msa0306460 | Msa1270240 | 0.843466 | 1.376985e-58 | -8.615850e-47 |
| Msa0306460 | Msa1270270 | 0.846489 | 2.103938e-59 | -8.615850e-47 |
| Msa0306460 | Msa1273230 | 0.826689 | 2.363226e-54 | -8.615850e-47 |
| Msa0306460 | Msa1283330 | 0.877043 | 8.618547e-69 | -8.615850e-47 |
| Msa0306460 | Msa1285930 | 0.868251 | 7.501731e-66 | -8.615850e-47 |
| Msa0306460 | Msa1287800 | 0.854170 | 1.470892e-61 | -8.615850e-47 |
| Msa0306460 | Msa1287810 | 0.870585 | 1.305286e-66 | -8.615850e-47 |
| Msa0306460 | Msa1289430 | 0.816749 | 4.709855e-52 | -8.615850e-47 |
| Msa0306460 | Msa1305480 | 0.808047 | 3.752875e-50 | -8.615850e-47 |
| Msa0306460 | Msa1310120 | 0.801631 | 8.221420e-49 | -8.615850e-47 |
| Msa0306460 | Msa1320300 | 0.807033 | 6.159423e-50 | -8.615850e-47 |
| Msa0306460 | Msa1340590 | 0.834343 | 3.166647e-56 | -8.615850e-47 |
| Msa0306460 | Msa1344520 | 0.803678 | 3.108897e-49 | -8.615850e-47 |
| Msa0306460 | Msa1382690 | 0.820529 | 6.537529e-53 | -8.615850e-47 |
| Msa0306460 | Msa1382700 | 0.803253 | 3.808308e-49 | -8.615850e-47 |
| Msa0306460 | Msa1397580 | 0.829325 | 5.483124e-55 | -8.615850e-47 |
| Msa0306460 | Msa1402790 | 0.819500 | 1.124237e-52 | -8.615850e-47 |
| Msa0306460 | Msa1404000 | 0.858373 | 8.614644e-63 | -8.615850e-47 |
| Msa0306460 | Msa1408780 | 0.817443 | 3.289265e-52 | -8.615850e-47 |
| Msa0306460 | Msa1415310 | 0.835715 | 1.427607e-56 | -8.615850e-47 |
| Msa0306460 | Msa1422180 | 0.857979 | 1.128167e-62 | -8.615850e-47 |
| Msa0306460 | Msa1433120 | 0.840491 | 8.420120e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 27 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATAGTATCAATCTTATAT+AGG | 0.366162 | 2_3:-65293155 | Msa0306460:five_prime_UTR |
| CCACTTGATTCCCTTGCGTT+GGG | 0.409880 | 2_3:+65292644 | None:intergenic |
| TCAGTCTCAGTTTGCACGGC+TGG | 0.418620 | 2_3:-65293119 | Msa0306460:five_prime_UTR |
| CCCACTTGATTCCCTTGCGT+TGG | 0.431316 | 2_3:+65292643 | None:intergenic |
| AGGAAGCAATAAATTTAAGC+TGG | 0.504728 | 2_3:-65293183 | Msa0306460:five_prime_UTR |
| CGAGATACAACAATCTCATC+GGG | 0.510114 | 2_3:-65292546 | Msa0306460:CDS |
| GAGATCGGAAAGTTCTTCTC+AGG | 0.511097 | 2_3:-65292696 | Msa0306460:CDS |
| CAGGAAAGTAAAACACAAGA+TGG | 0.533616 | 2_3:-65292677 | Msa0306460:CDS |
| GTTCCTCTGTTCCCAACGCA+AGG | 0.538012 | 2_3:-65292655 | Msa0306460:CDS |
| AGCAGCAACAAAAGTAGTGA+AGG | 0.542395 | 2_3:-65293209 | Msa0306460:five_prime_UTR |
| ATTGTGTTAGGATGGGAGAT+CGG | 0.543831 | 2_3:-65292711 | Msa0306460:intron |
| AAGAGAGATATCTACGGCTA+AGG | 0.558282 | 2_3:-65294267 | Msa0306460:intron |
| TCGAGATACAACAATCTCAT+CGG | 0.561426 | 2_3:-65292547 | Msa0306460:CDS |
| AACAAAAGTAGTGAAGGAAG+AGG | 0.570751 | 2_3:-65293203 | Msa0306460:five_prime_UTR |
| CAGCCGCGAGTGTTAAAAGT+GGG | 0.578565 | 2_3:-65292616 | Msa0306460:CDS |
| TTGTGCTGTGGAAATGTAGG+TGG | 0.582624 | 2_3:-65294315 | None:intergenic |
| CCCAACGCAAGGGAATCAAG+TGG | 0.588631 | 2_3:-65292644 | Msa0306460:CDS |
| TTCCCTTGCGTTGGGAACAG+AGG | 0.594506 | 2_3:+65292652 | None:intergenic |
| CCAACGCAAGGGAATCAAGT+GGG | 0.597329 | 2_3:-65292643 | Msa0306460:CDS |
| GCAGTCAGTCTCAGTTTGCA+CGG | 0.601159 | 2_3:-65293123 | Msa0306460:five_prime_UTR |
| TTCCTCTGTTCCCAACGCAA+GGG | 0.617747 | 2_3:-65292654 | Msa0306460:CDS |
| CAACGCAAGGGAATCAAGTG+GGG | 0.622276 | 2_3:-65292642 | Msa0306460:CDS |
| TCTAAGAAGAGAGATATCTA+CGG | 0.629357 | 2_3:-65294273 | Msa0306460:five_prime_UTR |
| GCCGCGAGTGTTAAAAGTGG+GGG | 0.633082 | 2_3:-65292614 | Msa0306460:CDS |
| TCAGCCGCGAGTGTTAAAAG+TGG | 0.638737 | 2_3:-65292617 | Msa0306460:CDS |
| AGCCGCGAGTGTTAAAAGTG+GGG | 0.663832 | 2_3:-65292615 | Msa0306460:CDS |
| AACGCAAGGGAATCAAGTGG+GGG | 0.669401 | 2_3:-65292641 | Msa0306460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTCATTTGCTATTT+TGG | + | chr2_3:65292875-65292894 | None:intergenic | 15.0% |
| !! | ATTAATTAAATGAATGAGTA+TGG | - | chr2_3:65293529-65293548 | Msa0306460:intron | 15.0% |
| !!! | GATATCAGTTATTTTTTATA+AGG | + | chr2_3:65293596-65293615 | None:intergenic | 15.0% |
| !!! | TTATTTTTCATTTGCTATTT+TGG | + | chr2_3:65292875-65292894 | None:intergenic | 15.0% |
| !! | ATTAATTAAATGAATGAGTA+TGG | - | chr2_3:65293529-65293548 | Msa0306460:intron | 15.0% |
| !!! | GATATCAGTTATTTTTTATA+AGG | + | chr2_3:65293596-65293615 | None:intergenic | 15.0% |
| !!! | ATAGATTTTTCTAGTCAATT+TGG | - | chr2_3:65292977-65292996 | Msa0306460:intron | 20.0% |
| !! | ATTAACAAATACCTCTTAAA+AGG | + | chr2_3:65293098-65293117 | None:intergenic | 20.0% |
| !! | TCATATTTAGTGAATAAAGT+TGG | - | chr2_3:65293163-65293182 | Msa0306460:five_prime_UTR | 20.0% |
| !! | AAAAAGCAAACGAAAAATAA+AGG | + | chr2_3:65293428-65293447 | None:intergenic | 20.0% |
| !! | TTTAATTAATGCTCTACATA+GGG | + | chr2_3:65293519-65293538 | None:intergenic | 20.0% |
| !! | ATTTAATTAATGCTCTACAT+AGG | + | chr2_3:65293520-65293539 | None:intergenic | 20.0% |
| !! | TGATAGTATCAATCTTATAT+AGG | - | chr2_3:65293697-65293716 | Msa0306460:intron | 20.0% |
| !! | TATACAATAGAATACTTAAG+TGG | + | chr2_3:65293981-65294000 | None:intergenic | 20.0% |
| !!! | ATAGATTTTTCTAGTCAATT+TGG | - | chr2_3:65292977-65292996 | Msa0306460:intron | 20.0% |
| !! | ATTAACAAATACCTCTTAAA+AGG | + | chr2_3:65293098-65293117 | None:intergenic | 20.0% |
| !! | TCATATTTAGTGAATAAAGT+TGG | - | chr2_3:65293163-65293182 | Msa0306460:five_prime_UTR | 20.0% |
| !! | AAAAAGCAAACGAAAAATAA+AGG | + | chr2_3:65293428-65293447 | None:intergenic | 20.0% |
| !! | TTTAATTAATGCTCTACATA+GGG | + | chr2_3:65293519-65293538 | None:intergenic | 20.0% |
| !! | ATTTAATTAATGCTCTACAT+AGG | + | chr2_3:65293520-65293539 | None:intergenic | 20.0% |
| !! | TGATAGTATCAATCTTATAT+AGG | - | chr2_3:65293697-65293716 | Msa0306460:intron | 20.0% |
| !! | TATACAATAGAATACTTAAG+TGG | + | chr2_3:65293981-65294000 | None:intergenic | 20.0% |
| !!! | TTGGTTTTGATTTTATGTTG+TGG | - | chr2_3:65292620-65292639 | Msa0306460:CDS | 25.0% |
| !! | ATTTTATGTTGTGGAAATGA+AGG | - | chr2_3:65292629-65292648 | Msa0306460:CDS | 25.0% |
| !! | TTTTATGTTGTGGAAATGAA+GGG | - | chr2_3:65292630-65292649 | Msa0306460:CDS | 25.0% |
| !!! | TAAGTAGATTGGTGTTATAT+CGG | - | chr2_3:65292670-65292689 | Msa0306460:CDS | 25.0% |
| !!! | GTATGCATTTTTATTTTGTC+TGG | - | chr2_3:65293119-65293138 | Msa0306460:five_prime_UTR | 25.0% |
| ! | AAACGAAAAATAAAGGAACA+AGG | + | chr2_3:65293421-65293440 | None:intergenic | 25.0% |
| ! | TATTACATCTGTATAGTTAC+TGG | - | chr2_3:65293814-65293833 | Msa0306460:intron | 25.0% |
| ! | GAAACATGTATAGGTATAAT+TGG | + | chr2_3:65294069-65294088 | None:intergenic | 25.0% |
| !!! | TTGGTTTTGATTTTATGTTG+TGG | - | chr2_3:65292620-65292639 | Msa0306460:CDS | 25.0% |
| !! | ATTTTATGTTGTGGAAATGA+AGG | - | chr2_3:65292629-65292648 | Msa0306460:CDS | 25.0% |
| !! | TTTTATGTTGTGGAAATGAA+GGG | - | chr2_3:65292630-65292649 | Msa0306460:CDS | 25.0% |
| !!! | TAAGTAGATTGGTGTTATAT+CGG | - | chr2_3:65292670-65292689 | Msa0306460:CDS | 25.0% |
| !!! | GTATGCATTTTTATTTTGTC+TGG | - | chr2_3:65293119-65293138 | Msa0306460:five_prime_UTR | 25.0% |
| ! | AAACGAAAAATAAAGGAACA+AGG | + | chr2_3:65293421-65293440 | None:intergenic | 25.0% |
| ! | TATTACATCTGTATAGTTAC+TGG | - | chr2_3:65293814-65293833 | Msa0306460:intron | 25.0% |
| ! | GAAACATGTATAGGTATAAT+TGG | + | chr2_3:65294069-65294088 | None:intergenic | 25.0% |
| TCTAAGAAGAGAGATATCTA+CGG | - | chr2_3:65292579-65292598 | Msa0306460:CDS | 30.0% | |
| !! | GCTAAGGTATCTTTCATTTT+TGG | - | chr2_3:65292601-65292620 | Msa0306460:CDS | 30.0% |
| TGAATACTATGAGACATGTT+TGG | - | chr2_3:65292740-65292759 | Msa0306460:intron | 30.0% | |
| TAAGCACTTGGAATATTGTT+TGG | - | chr2_3:65292792-65292811 | Msa0306460:intron | 30.0% | |
| !!! | TGGTTCTCTATTTTTTCAAG+AGG | - | chr2_3:65292997-65293016 | Msa0306460:intron | 30.0% |
| CAATGTGTATCCAACTAAAA+AGG | + | chr2_3:65293056-65293075 | None:intergenic | 30.0% | |
| GATCAGTCTTAAGAACTAAA+TGG | - | chr2_3:65293259-65293278 | Msa0306460:intron | 30.0% | |
| TTCAACAAATAAAGTAACGC+AGG | + | chr2_3:65293321-65293340 | None:intergenic | 30.0% | |
| AGGAAGCAATAAATTTAAGC+TGG | - | chr2_3:65293669-65293688 | Msa0306460:intron | 30.0% | |
| ! | TCAATCGTGTCAAATTTTCT+TGG | - | chr2_3:65294019-65294038 | Msa0306460:intron | 30.0% |
| ! | CAATCGTGTCAAATTTTCTT+GGG | - | chr2_3:65294020-65294039 | Msa0306460:intron | 30.0% |
| GCATAGTATGAAACATGTAT+AGG | + | chr2_3:65294078-65294097 | None:intergenic | 30.0% | |
| !! | CGCATGATTTTAACATTTAC+TGG | + | chr2_3:65294116-65294135 | None:intergenic | 30.0% |
| ! | AAGAACTTGTGTTTTACTTG+CGG | + | chr2_3:65294269-65294288 | None:intergenic | 30.0% |
| TCTAAGAAGAGAGATATCTA+CGG | - | chr2_3:65292579-65292598 | Msa0306460:CDS | 30.0% | |
| !! | GCTAAGGTATCTTTCATTTT+TGG | - | chr2_3:65292601-65292620 | Msa0306460:CDS | 30.0% |
| TGAATACTATGAGACATGTT+TGG | - | chr2_3:65292740-65292759 | Msa0306460:intron | 30.0% | |
| TAAGCACTTGGAATATTGTT+TGG | - | chr2_3:65292792-65292811 | Msa0306460:intron | 30.0% | |
| !!! | TGGTTCTCTATTTTTTCAAG+AGG | - | chr2_3:65292997-65293016 | Msa0306460:intron | 30.0% |
| CAATGTGTATCCAACTAAAA+AGG | + | chr2_3:65293056-65293075 | None:intergenic | 30.0% | |
| GATCAGTCTTAAGAACTAAA+TGG | - | chr2_3:65293259-65293278 | Msa0306460:intron | 30.0% | |
| TTCAACAAATAAAGTAACGC+AGG | + | chr2_3:65293321-65293340 | None:intergenic | 30.0% | |
| AGGAAGCAATAAATTTAAGC+TGG | - | chr2_3:65293669-65293688 | Msa0306460:intron | 30.0% | |
| ! | TCAATCGTGTCAAATTTTCT+TGG | - | chr2_3:65294019-65294038 | Msa0306460:intron | 30.0% |
| ! | CAATCGTGTCAAATTTTCTT+GGG | - | chr2_3:65294020-65294039 | Msa0306460:intron | 30.0% |
| GCATAGTATGAAACATGTAT+AGG | + | chr2_3:65294078-65294097 | None:intergenic | 30.0% | |
| !! | CGCATGATTTTAACATTTAC+TGG | + | chr2_3:65294116-65294135 | None:intergenic | 30.0% |
| ! | AAGAACTTGTGTTTTACTTG+CGG | + | chr2_3:65294269-65294288 | None:intergenic | 30.0% |
| !! | AAATGAAGGGTGTTATTGGT+TGG | - | chr2_3:65292643-65292662 | Msa0306460:CDS | 35.0% |
| !! | AATGAAGGGTGTTATTGGTT+GGG | - | chr2_3:65292644-65292663 | Msa0306460:CDS | 35.0% |
| !! | TAGATTGGTGTTATATCGGT+TGG | - | chr2_3:65292674-65292693 | Msa0306460:CDS | 35.0% |
| !! | AGATTGGTGTTATATCGGTT+GGG | - | chr2_3:65292675-65292694 | Msa0306460:CDS | 35.0% |
| !! | ATGATGCATGCCTTTTTAGT+TGG | - | chr2_3:65293043-65293062 | Msa0306460:intron | 35.0% |
| ! | TATGATGCATGCCTTTTAAG+AGG | - | chr2_3:65293084-65293103 | Msa0306460:intron | 35.0% |
| AAATAAAGTAACGCAGGAAG+GGG | + | chr2_3:65293315-65293334 | None:intergenic | 35.0% | |
| CAAATAAAGTAACGCAGGAA+GGG | + | chr2_3:65293316-65293335 | None:intergenic | 35.0% | |
| ACAAATAAAGTAACGCAGGA+AGG | + | chr2_3:65293317-65293336 | None:intergenic | 35.0% | |
| GTAATGTGTTCCCATTAAGA+AGG | - | chr2_3:65293451-65293470 | Msa0306460:intron | 35.0% | |
| ATCTTGAATGTTTGTGCTTC+AGG | - | chr2_3:65293613-65293632 | Msa0306460:intron | 35.0% | |
| AACAAAAGTAGTGAAGGAAG+AGG | - | chr2_3:65293649-65293668 | Msa0306460:intron | 35.0% | |
| TACATCTGTATAGTTACTGG+TGG | - | chr2_3:65293817-65293836 | Msa0306460:intron | 35.0% | |
| CTACCTAAGCTTCATCTATA+AGG | - | chr2_3:65293929-65293948 | Msa0306460:intron | 35.0% | |
| ATATCATCAGTTTCCTAGCT+GGG | + | chr2_3:65293957-65293976 | None:intergenic | 35.0% | |
| AATATCATCAGTTTCCTAGC+TGG | + | chr2_3:65293958-65293977 | None:intergenic | 35.0% | |
| CAGGAAAGTAAAACACAAGA+TGG | - | chr2_3:65294175-65294194 | Msa0306460:intron | 35.0% | |
| TCGAGATACAACAATCTCAT+CGG | - | chr2_3:65294305-65294324 | Msa0306460:five_prime_UTR | 35.0% | |
| !! | AAATGAAGGGTGTTATTGGT+TGG | - | chr2_3:65292643-65292662 | Msa0306460:CDS | 35.0% |
| !! | AATGAAGGGTGTTATTGGTT+GGG | - | chr2_3:65292644-65292663 | Msa0306460:CDS | 35.0% |
| !! | TAGATTGGTGTTATATCGGT+TGG | - | chr2_3:65292674-65292693 | Msa0306460:CDS | 35.0% |
| !! | AGATTGGTGTTATATCGGTT+GGG | - | chr2_3:65292675-65292694 | Msa0306460:CDS | 35.0% |
| !! | ATGATGCATGCCTTTTTAGT+TGG | - | chr2_3:65293043-65293062 | Msa0306460:intron | 35.0% |
| ! | TATGATGCATGCCTTTTAAG+AGG | - | chr2_3:65293084-65293103 | Msa0306460:intron | 35.0% |
| AAATAAAGTAACGCAGGAAG+GGG | + | chr2_3:65293315-65293334 | None:intergenic | 35.0% | |
| CAAATAAAGTAACGCAGGAA+GGG | + | chr2_3:65293316-65293335 | None:intergenic | 35.0% | |
| ACAAATAAAGTAACGCAGGA+AGG | + | chr2_3:65293317-65293336 | None:intergenic | 35.0% | |
| GTAATGTGTTCCCATTAAGA+AGG | - | chr2_3:65293451-65293470 | Msa0306460:intron | 35.0% | |
| ATCTTGAATGTTTGTGCTTC+AGG | - | chr2_3:65293613-65293632 | Msa0306460:intron | 35.0% | |
| AACAAAAGTAGTGAAGGAAG+AGG | - | chr2_3:65293649-65293668 | Msa0306460:intron | 35.0% | |
| TACATCTGTATAGTTACTGG+TGG | - | chr2_3:65293817-65293836 | Msa0306460:intron | 35.0% | |
| CTACCTAAGCTTCATCTATA+AGG | - | chr2_3:65293929-65293948 | Msa0306460:intron | 35.0% | |
| ATATCATCAGTTTCCTAGCT+GGG | + | chr2_3:65293957-65293976 | None:intergenic | 35.0% | |
| AATATCATCAGTTTCCTAGC+TGG | + | chr2_3:65293958-65293977 | None:intergenic | 35.0% | |
| CAGGAAAGTAAAACACAAGA+TGG | - | chr2_3:65294175-65294194 | Msa0306460:intron | 35.0% | |
| TCGAGATACAACAATCTCAT+CGG | - | chr2_3:65294305-65294324 | Msa0306460:five_prime_UTR | 35.0% | |
| AAGAGAGATATCTACGGCTA+AGG | - | chr2_3:65292585-65292604 | Msa0306460:CDS | 40.0% | |
| !! | GTGGAAATGAAGGGTGTTAT+TGG | - | chr2_3:65292639-65292658 | Msa0306460:CDS | 40.0% |
| !! | ATGAAGGGTGTTATTGGTTG+GGG | - | chr2_3:65292645-65292664 | Msa0306460:CDS | 40.0% |
| TGGTTGGGGATTAAGTAGAT+TGG | - | chr2_3:65292659-65292678 | Msa0306460:CDS | 40.0% | |
| !! | GATTGGTGTTATATCGGTTG+GGG | - | chr2_3:65292676-65292695 | Msa0306460:CDS | 40.0% |
| !! | TGTTGACTTGCATAAGCACT+TGG | - | chr2_3:65292780-65292799 | Msa0306460:intron | 40.0% |
| ACTGTGCTCACCTTCTTAAT+GGG | + | chr2_3:65293464-65293483 | None:intergenic | 40.0% | |
| TACTGTGCTCACCTTCTTAA+TGG | + | chr2_3:65293465-65293484 | None:intergenic | 40.0% | |
| TTGGTTATACTGCATCCACA+TGG | + | chr2_3:65293491-65293510 | None:intergenic | 40.0% | |
| !! | TGCTCTACATAGGGAGTATT+TGG | + | chr2_3:65293510-65293529 | None:intergenic | 40.0% |
| AATGTTTGTGCTTCAGGTGT+GGG | - | chr2_3:65293619-65293638 | Msa0306460:intron | 40.0% | |
| AGCAGCAACAAAAGTAGTGA+AGG | - | chr2_3:65293643-65293662 | Msa0306460:intron | 40.0% | |
| ! | TCTAAGATGCGCACCTAATT+TGG | - | chr2_3:65293842-65293861 | Msa0306460:intron | 40.0% |
| CTAAGATGCGCACCTAATTT+GGG | - | chr2_3:65293843-65293862 | Msa0306460:intron | 40.0% | |
| TAAGATGCGCACCTAATTTG+GGG | - | chr2_3:65293844-65293863 | Msa0306460:intron | 40.0% | |
| AAGTTTCCAGTGGCCAATAA+GGG | + | chr2_3:65293883-65293902 | None:intergenic | 40.0% | |
| GTGCCTTATAGATGAAGCTT+AGG | + | chr2_3:65293935-65293954 | None:intergenic | 40.0% | |
| TCATGCGCTTGAATTGTGTT+AGG | - | chr2_3:65294129-65294148 | Msa0306460:intron | 40.0% | |
| CGCTTGAATTGTGTTAGGAT+GGG | - | chr2_3:65294134-65294153 | Msa0306460:intron | 40.0% | |
| ATTGTGTTAGGATGGGAGAT+CGG | - | chr2_3:65294141-65294160 | Msa0306460:intron | 40.0% | |
| CGAGATACAACAATCTCATC+GGG | - | chr2_3:65294306-65294325 | Msa0306460:five_prime_UTR | 40.0% | |
| AAGAGAGATATCTACGGCTA+AGG | - | chr2_3:65292585-65292604 | Msa0306460:CDS | 40.0% | |
| !! | GTGGAAATGAAGGGTGTTAT+TGG | - | chr2_3:65292639-65292658 | Msa0306460:CDS | 40.0% |
| !! | ATGAAGGGTGTTATTGGTTG+GGG | - | chr2_3:65292645-65292664 | Msa0306460:CDS | 40.0% |
| TGGTTGGGGATTAAGTAGAT+TGG | - | chr2_3:65292659-65292678 | Msa0306460:CDS | 40.0% | |
| !! | GATTGGTGTTATATCGGTTG+GGG | - | chr2_3:65292676-65292695 | Msa0306460:CDS | 40.0% |
| !! | TGTTGACTTGCATAAGCACT+TGG | - | chr2_3:65292780-65292799 | Msa0306460:intron | 40.0% |
| ACTGTGCTCACCTTCTTAAT+GGG | + | chr2_3:65293464-65293483 | None:intergenic | 40.0% | |
| TACTGTGCTCACCTTCTTAA+TGG | + | chr2_3:65293465-65293484 | None:intergenic | 40.0% | |
| TTGGTTATACTGCATCCACA+TGG | + | chr2_3:65293491-65293510 | None:intergenic | 40.0% | |
| !! | TGCTCTACATAGGGAGTATT+TGG | + | chr2_3:65293510-65293529 | None:intergenic | 40.0% |
| AATGTTTGTGCTTCAGGTGT+GGG | - | chr2_3:65293619-65293638 | Msa0306460:intron | 40.0% | |
| AGCAGCAACAAAAGTAGTGA+AGG | - | chr2_3:65293643-65293662 | Msa0306460:intron | 40.0% | |
| ! | TCTAAGATGCGCACCTAATT+TGG | - | chr2_3:65293842-65293861 | Msa0306460:intron | 40.0% |
| CTAAGATGCGCACCTAATTT+GGG | - | chr2_3:65293843-65293862 | Msa0306460:intron | 40.0% | |
| TAAGATGCGCACCTAATTTG+GGG | - | chr2_3:65293844-65293863 | Msa0306460:intron | 40.0% | |
| AAGTTTCCAGTGGCCAATAA+GGG | + | chr2_3:65293883-65293902 | None:intergenic | 40.0% | |
| GTGCCTTATAGATGAAGCTT+AGG | + | chr2_3:65293935-65293954 | None:intergenic | 40.0% | |
| TCATGCGCTTGAATTGTGTT+AGG | - | chr2_3:65294129-65294148 | Msa0306460:intron | 40.0% | |
| CGCTTGAATTGTGTTAGGAT+GGG | - | chr2_3:65294134-65294153 | Msa0306460:intron | 40.0% | |
| ATTGTGTTAGGATGGGAGAT+CGG | - | chr2_3:65294141-65294160 | Msa0306460:intron | 40.0% | |
| CGAGATACAACAATCTCATC+GGG | - | chr2_3:65294306-65294325 | Msa0306460:five_prime_UTR | 40.0% | |
| ! | TTATATCGGTTGGGGATCAC+AGG | - | chr2_3:65292684-65292703 | Msa0306460:CDS | 45.0% |
| GTGAGCACAGTATATCCATG+TGG | - | chr2_3:65293473-65293492 | Msa0306460:intron | 45.0% | |
| GAATGTTTGTGCTTCAGGTG+TGG | - | chr2_3:65293618-65293637 | Msa0306460:intron | 45.0% | |
| ! | TGTACGCTTGCTACCCTTAT+TGG | - | chr2_3:65293867-65293886 | Msa0306460:intron | 45.0% |
| CAAGTTTCCAGTGGCCAATA+AGG | + | chr2_3:65293884-65293903 | None:intergenic | 45.0% | |
| TTCCTCTGACAAGTTTCCAG+TGG | + | chr2_3:65293893-65293912 | None:intergenic | 45.0% | |
| GCGCTTGAATTGTGTTAGGA+TGG | - | chr2_3:65294133-65294152 | Msa0306460:intron | 45.0% | |
| GAGATCGGAAAGTTCTTCTC+AGG | - | chr2_3:65294156-65294175 | Msa0306460:intron | 45.0% | |
| ! | TTATATCGGTTGGGGATCAC+AGG | - | chr2_3:65292684-65292703 | Msa0306460:CDS | 45.0% |
| GTGAGCACAGTATATCCATG+TGG | - | chr2_3:65293473-65293492 | Msa0306460:intron | 45.0% | |
| GAATGTTTGTGCTTCAGGTG+TGG | - | chr2_3:65293618-65293637 | Msa0306460:intron | 45.0% | |
| ! | TGTACGCTTGCTACCCTTAT+TGG | - | chr2_3:65293867-65293886 | Msa0306460:intron | 45.0% |
| CAAGTTTCCAGTGGCCAATA+AGG | + | chr2_3:65293884-65293903 | None:intergenic | 45.0% | |
| TTCCTCTGACAAGTTTCCAG+TGG | + | chr2_3:65293893-65293912 | None:intergenic | 45.0% | |
| GCGCTTGAATTGTGTTAGGA+TGG | - | chr2_3:65294133-65294152 | Msa0306460:intron | 45.0% | |
| GAGATCGGAAAGTTCTTCTC+AGG | - | chr2_3:65294156-65294175 | Msa0306460:intron | 45.0% | |
| GCAGTCAGTCTCAGTTTGCA+CGG | - | chr2_3:65293729-65293748 | Msa0306460:intron | 50.0% | |
| GCAAGCGTACACCCCAAATT+AGG | + | chr2_3:65293858-65293877 | None:intergenic | 50.0% | |
| TTGCTACCCTTATTGGCCAC+TGG | - | chr2_3:65293874-65293893 | Msa0306460:intron | 50.0% | |
| ! | CATCTATAAGGCACCCAGCT+AGG | - | chr2_3:65293941-65293960 | Msa0306460:intron | 50.0% |
| TTCCTCTGTTCCCAACGCAA+GGG | - | chr2_3:65294198-65294217 | Msa0306460:intron | 50.0% | |
| CCACTTGATTCCCTTGCGTT+GGG | + | chr2_3:65294211-65294230 | None:intergenic | 50.0% | |
| CCAACGCAAGGGAATCAAGT+GGG | - | chr2_3:65294209-65294228 | Msa0306460:intron | 50.0% | |
| CAACGCAAGGGAATCAAGTG+GGG | - | chr2_3:65294210-65294229 | Msa0306460:intron | 50.0% | |
| AACGCAAGGGAATCAAGTGG+GGG | - | chr2_3:65294211-65294230 | Msa0306460:intron | 50.0% | |
| TCAGCCGCGAGTGTTAAAAG+TGG | - | chr2_3:65294235-65294254 | Msa0306460:intron | 50.0% | |
| CAGCCGCGAGTGTTAAAAGT+GGG | - | chr2_3:65294236-65294255 | Msa0306460:intron | 50.0% | |
| AGCCGCGAGTGTTAAAAGTG+GGG | - | chr2_3:65294237-65294256 | Msa0306460:intron | 50.0% | |
| !! | TCCCCCACTTTTAACACTCG+CGG | + | chr2_3:65294242-65294261 | None:intergenic | 50.0% |
| GCAGTCAGTCTCAGTTTGCA+CGG | - | chr2_3:65293729-65293748 | Msa0306460:intron | 50.0% | |
| GCAAGCGTACACCCCAAATT+AGG | + | chr2_3:65293858-65293877 | None:intergenic | 50.0% | |
| TTGCTACCCTTATTGGCCAC+TGG | - | chr2_3:65293874-65293893 | Msa0306460:intron | 50.0% | |
| ! | CATCTATAAGGCACCCAGCT+AGG | - | chr2_3:65293941-65293960 | Msa0306460:intron | 50.0% |
| TTCCTCTGTTCCCAACGCAA+GGG | - | chr2_3:65294198-65294217 | Msa0306460:intron | 50.0% | |
| CCACTTGATTCCCTTGCGTT+GGG | + | chr2_3:65294211-65294230 | None:intergenic | 50.0% | |
| CCAACGCAAGGGAATCAAGT+GGG | - | chr2_3:65294209-65294228 | Msa0306460:intron | 50.0% | |
| CAACGCAAGGGAATCAAGTG+GGG | - | chr2_3:65294210-65294229 | Msa0306460:intron | 50.0% | |
| AACGCAAGGGAATCAAGTGG+GGG | - | chr2_3:65294211-65294230 | Msa0306460:intron | 50.0% | |
| TCAGCCGCGAGTGTTAAAAG+TGG | - | chr2_3:65294235-65294254 | Msa0306460:intron | 50.0% | |
| CAGCCGCGAGTGTTAAAAGT+GGG | - | chr2_3:65294236-65294255 | Msa0306460:intron | 50.0% | |
| AGCCGCGAGTGTTAAAAGTG+GGG | - | chr2_3:65294237-65294256 | Msa0306460:intron | 50.0% | |
| !! | TCCCCCACTTTTAACACTCG+CGG | + | chr2_3:65294242-65294261 | None:intergenic | 50.0% |
| TCAGTCTCAGTTTGCACGGC+TGG | - | chr2_3:65293733-65293752 | Msa0306460:intron | 55.0% | |
| GGCCACTGGAAACTTGTCAG+AGG | - | chr2_3:65293888-65293907 | Msa0306460:intron | 55.0% | |
| GTTCCTCTGTTCCCAACGCA+AGG | - | chr2_3:65294197-65294216 | Msa0306460:intron | 55.0% | |
| TTCCCTTGCGTTGGGAACAG+AGG | + | chr2_3:65294203-65294222 | None:intergenic | 55.0% | |
| CCCAACGCAAGGGAATCAAG+TGG | - | chr2_3:65294208-65294227 | Msa0306460:intron | 55.0% | |
| CCCACTTGATTCCCTTGCGT+TGG | + | chr2_3:65294212-65294231 | None:intergenic | 55.0% | |
| GCCGCGAGTGTTAAAAGTGG+GGG | - | chr2_3:65294238-65294257 | Msa0306460:intron | 55.0% | |
| TCAGTCTCAGTTTGCACGGC+TGG | - | chr2_3:65293733-65293752 | Msa0306460:intron | 55.0% | |
| GGCCACTGGAAACTTGTCAG+AGG | - | chr2_3:65293888-65293907 | Msa0306460:intron | 55.0% | |
| GTTCCTCTGTTCCCAACGCA+AGG | - | chr2_3:65294197-65294216 | Msa0306460:intron | 55.0% | |
| TTCCCTTGCGTTGGGAACAG+AGG | + | chr2_3:65294203-65294222 | None:intergenic | 55.0% | |
| CCCAACGCAAGGGAATCAAG+TGG | - | chr2_3:65294208-65294227 | Msa0306460:intron | 55.0% | |
| CCCACTTGATTCCCTTGCGT+TGG | + | chr2_3:65294212-65294231 | None:intergenic | 55.0% | |
| GCCGCGAGTGTTAAAAGTGG+GGG | - | chr2_3:65294238-65294257 | Msa0306460:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 65292543 | 65294331 | 65292543 | ID=Msa0306460;Name=Msa0306460 |
| chr2_3 | mRNA | 65292543 | 65294331 | 65292543 | ID=Msa0306460-mRNA-1;Parent=Msa0306460;Name=Msa0306460-mRNA-1;_AED=0.00;_eAED=0.00;_QI=205|1|0.66|1|0.5|0.33|3|0|64 |
| chr2_3 | exon | 65292543 | 65292723 | 65292543 | ID=Msa0306460-mRNA-1:exon:21763;Parent=Msa0306460-mRNA-1 |
| chr2_3 | exon | 65293088 | 65293239 | 65293088 | ID=Msa0306460-mRNA-1:exon:21762;Parent=Msa0306460-mRNA-1 |
| chr2_3 | exon | 65294268 | 65294331 | 65294268 | ID=Msa0306460-mRNA-1:exon:21761;Parent=Msa0306460-mRNA-1 |
| chr2_3 | five_prime_UTR | 65294268 | 65294331 | 65294268 | ID=Msa0306460-mRNA-1:five_prime_utr;Parent=Msa0306460-mRNA-1 |
| chr2_3 | five_prime_UTR | 65293099 | 65293239 | 65293099 | ID=Msa0306460-mRNA-1:five_prime_utr;Parent=Msa0306460-mRNA-1 |
| chr2_3 | CDS | 65293088 | 65293098 | 65293088 | ID=Msa0306460-mRNA-1:cds;Parent=Msa0306460-mRNA-1 |
| chr2_3 | CDS | 65292543 | 65292723 | 65292543 | ID=Msa0306460-mRNA-1:cds;Parent=Msa0306460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
