Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767720 | sp|Q9FFJ8|LIMYB_ARATH | 24.290 | 317 | 215 | 6 | 6 | 322 | 156 | 447 | 4.68e-20 | 93.6 |
| Msa0767720 | sp|Q9FFJ8|LIMYB_ARATH | 34.234 | 111 | 72 | 1 | 20 | 130 | 2 | 111 | 2.31e-14 | 77.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767720 | G7IB81 | 91.615 | 322 | 26 | 1 | 1 | 322 | 1 | 321 | 0.0 | 602 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa0767720 | 0.863793 | 1.931440e-64 | -8.615850e-47 |
| Msa0016570 | Msa0767720 | 0.891683 | 3.175977e-74 | -8.615850e-47 |
| Msa0016580 | Msa0767720 | 0.844843 | 5.882717e-59 | -8.615850e-47 |
| Msa0092630 | Msa0767720 | 0.806411 | 8.332876e-50 | -8.615850e-47 |
| Msa0102070 | Msa0767720 | 0.847279 | 1.278405e-59 | -8.615850e-47 |
| Msa0107580 | Msa0767720 | 0.807358 | 5.255128e-50 | -8.615850e-47 |
| Msa0110270 | Msa0767720 | 0.847672 | 9.969616e-60 | -8.615850e-47 |
| Msa0111510 | Msa0767720 | 0.838519 | 2.739886e-57 | -8.615850e-47 |
| Msa0604350 | Msa0767720 | 0.836347 | 9.872356e-57 | -8.615850e-47 |
| Msa0636170 | Msa0767720 | 0.852192 | 5.424008e-61 | -8.615850e-47 |
| Msa0639610 | Msa0767720 | 0.836534 | 8.845232e-57 | -8.615850e-47 |
| Msa0678930 | Msa0767720 | 0.846385 | 2.245853e-59 | -8.615850e-47 |
| Msa0694370 | Msa0767720 | 0.843172 | 1.650329e-58 | -8.615850e-47 |
| Msa0697060 | Msa0767720 | 0.822106 | 2.828451e-53 | -8.615850e-47 |
| Msa0726140 | Msa0767720 | 0.868958 | 4.433185e-66 | -8.615850e-47 |
| Msa0729800 | Msa0767720 | 0.839715 | 1.342733e-57 | -8.615850e-47 |
| Msa0731550 | Msa0767720 | 0.803009 | 4.275809e-49 | -8.615850e-47 |
| Msa0732710 | Msa0767720 | 0.800311 | 1.529934e-48 | -8.615850e-47 |
| Msa0733290 | Msa0767720 | 0.838160 | 3.390880e-57 | -8.615850e-47 |
| Msa0741990 | Msa0767720 | 0.819984 | 8.715820e-53 | -8.615850e-47 |
| Msa0743810 | Msa0767720 | 0.876466 | 1.365767e-68 | -8.615850e-47 |
| Msa0745060 | Msa0767720 | 0.872887 | 2.250470e-67 | -8.615850e-47 |
| Msa0764960 | Msa0767720 | 0.828106 | 1.080950e-54 | -8.615850e-47 |
| Msa0766630 | Msa0767720 | 0.835221 | 1.903528e-56 | -8.615850e-47 |
| Msa0767720 | Msa0783160 | 0.891990 | 2.397604e-74 | -8.615850e-47 |
| Msa0767720 | Msa0787600 | 0.875396 | 3.183907e-68 | -8.615850e-47 |
| Msa0767720 | Msa0789250 | 0.855368 | 6.611842e-62 | -8.615850e-47 |
| Msa0767720 | Msa0808010 | 0.823518 | 1.326780e-53 | -8.615850e-47 |
| Msa0767720 | Msa0808020 | 0.821011 | 5.065251e-53 | -8.615850e-47 |
| Msa0767720 | Msa0811080 | 0.862498 | 4.856167e-64 | -8.615850e-47 |
| Msa0767720 | Msa0811270 | 0.839081 | 1.961205e-57 | -8.615850e-47 |
| Msa0767720 | Msa0825860 | 0.866547 | 2.632013e-65 | -8.615850e-47 |
| Msa0767720 | Msa0826750 | 0.808682 | 2.747417e-50 | -8.615850e-47 |
| Msa0767720 | Msa0833290 | 0.820996 | 5.105426e-53 | -8.615850e-47 |
| Msa0767720 | Msa0846210 | 0.826788 | 2.238566e-54 | -8.615850e-47 |
| Msa0767720 | Msa0846330 | 0.820815 | 5.617893e-53 | -8.615850e-47 |
| Msa0767720 | Msa0846350 | 0.835974 | 1.227782e-56 | -8.615850e-47 |
| Msa0767720 | Msa0848060 | 0.803252 | 3.809904e-49 | -8.615850e-47 |
| Msa0767720 | Msa0848960 | 0.811707 | 6.117542e-51 | -8.615850e-47 |
| Msa0767720 | Msa0858980 | 0.827786 | 1.290731e-54 | -8.615850e-47 |
| Msa0767720 | Msa0865320 | 0.846705 | 1.836109e-59 | -8.615850e-47 |
| Msa0767720 | Msa0872230 | 0.818765 | 1.652419e-52 | -8.615850e-47 |
| Msa0767720 | Msa0885280 | 0.840802 | 6.980180e-58 | -8.615850e-47 |
| Msa0767720 | Msa0885290 | 0.877891 | 4.367551e-69 | -8.615850e-47 |
| Msa0767720 | Msa0886750 | 0.820492 | 6.666445e-53 | -8.615850e-47 |
| Msa0767720 | Msa0888370 | 0.824858 | 6.428683e-54 | -8.615850e-47 |
| Msa0767720 | Msa0896080 | 0.834811 | 2.414701e-56 | -8.615850e-47 |
| Msa0767720 | Msa0907260 | 0.841413 | 4.825411e-58 | -8.615850e-47 |
| Msa0767720 | Msa0952720 | 0.810858 | 9.354236e-51 | -8.615850e-47 |
| Msa0767720 | Msa0954910 | 0.815492 | 8.992172e-52 | -8.615850e-47 |
| Msa0767720 | Msa0956270 | 0.847653 | 1.008971e-59 | -8.615850e-47 |
| Msa0767720 | Msa0957680 | 0.805166 | 1.521744e-49 | -8.615850e-47 |
| Msa0767720 | Msa0964220 | 0.800117 | 1.675506e-48 | -8.615850e-47 |
| Msa0767720 | Msa0979850 | 0.827116 | 1.868353e-54 | -8.615850e-47 |
| Msa0767720 | Msa0981270 | 0.809542 | 1.797254e-50 | -8.615850e-47 |
| Msa0767720 | Msa0981370 | 0.851445 | 8.832353e-61 | -8.615850e-47 |
| Msa0767720 | Msa0989060 | 0.826627 | 2.445632e-54 | -8.615850e-47 |
| Msa0767720 | Msa1014540 | 0.801800 | 7.590822e-49 | -8.615850e-47 |
| Msa0767720 | Msa1016280 | 0.878447 | 2.787638e-69 | -8.615850e-47 |
| Msa0767720 | Msa1023010 | 0.805733 | 1.157418e-49 | -8.615850e-47 |
| Msa0767720 | Msa1023050 | 0.821584 | 3.735630e-53 | -8.615850e-47 |
| Msa0767720 | Msa1024240 | 0.854230 | 1.413207e-61 | -8.615850e-47 |
| Msa0767720 | Msa1025360 | 0.872089 | 4.155382e-67 | -8.615850e-47 |
| Msa0767720 | Msa1025370 | 0.860084 | 2.642007e-63 | -8.615850e-47 |
| Msa0767720 | Msa1044830 | 0.865798 | 4.547334e-65 | -8.615850e-47 |
| Msa0767720 | Msa1044840 | 0.871706 | 5.569874e-67 | -8.615850e-47 |
| Msa0767720 | Msa1054790 | 0.811717 | 6.089969e-51 | -8.615850e-47 |
| Msa0767720 | Msa1060840 | 0.810438 | 1.152826e-50 | -8.615850e-47 |
| Msa0767720 | Msa1077460 | 0.806427 | 8.268216e-50 | -8.615850e-47 |
| Msa0767720 | Msa1092990 | 0.886323 | 3.778763e-72 | -8.615850e-47 |
| Msa0767720 | Msa1096580 | 0.800558 | 1.362376e-48 | -8.615850e-47 |
| Msa0767720 | Msa1099970 | 0.804653 | 1.947889e-49 | -8.615850e-47 |
| Msa0767720 | Msa1100980 | 0.880925 | 3.671846e-70 | -8.615850e-47 |
| Msa0767720 | Msa1109440 | 0.880321 | 6.041634e-70 | -8.615850e-47 |
| Msa0767720 | Msa1114030 | 0.802037 | 6.784236e-49 | -8.615850e-47 |
| Msa0767720 | Msa1116260 | 0.800277 | 1.554468e-48 | -8.615850e-47 |
| Msa0767720 | Msa1117150 | 0.801669 | 8.072072e-49 | -8.615850e-47 |
| Msa0767720 | Msa1121200 | 0.862392 | 5.234624e-64 | -8.615850e-47 |
| Msa0767720 | Msa1121480 | 0.813504 | 2.475692e-51 | -8.615850e-47 |
| Msa0767720 | Msa1135220 | 0.803574 | 3.266969e-49 | -8.615850e-47 |
| Msa0767720 | Msa1135740 | 0.859944 | 2.913208e-63 | -8.615850e-47 |
| Msa0767720 | Msa1136090 | 0.812127 | 4.956793e-51 | -8.615850e-47 |
| Msa0767720 | Msa1146110 | 0.869872 | 2.235675e-66 | -8.615850e-47 |
| Msa0767720 | Msa1148020 | 0.832183 | 1.093075e-55 | -8.615850e-47 |
| Msa0767720 | Msa1149360 | 0.814393 | 1.576127e-51 | -8.615850e-47 |
| Msa0767720 | Msa1150370 | 0.822084 | 2.862374e-53 | -8.615850e-47 |
| Msa0767720 | Msa1160670 | 0.823965 | 1.042402e-53 | -8.615850e-47 |
| Msa0767720 | Msa1164120 | 0.811526 | 6.699622e-51 | -8.615850e-47 |
| Msa0767720 | Msa1173920 | 0.829444 | 5.131372e-55 | -8.615850e-47 |
| Msa0767720 | Msa1184420 | 0.804543 | 2.053614e-49 | -8.615850e-47 |
| Msa0767720 | Msa1187940 | 0.884922 | 1.266755e-71 | -8.615850e-47 |
| Msa0767720 | Msa1187950 | 0.852747 | 3.768930e-61 | -8.615850e-47 |
| Msa0767720 | Msa1192640 | 0.880965 | 3.553282e-70 | -8.615850e-47 |
| Msa0767720 | Msa1193730 | 0.801112 | 1.050102e-48 | -8.615850e-47 |
| Msa0767720 | Msa1230430 | 0.821099 | 4.833462e-53 | -8.615850e-47 |
| Msa0767720 | Msa1246880 | 0.833863 | 4.177436e-56 | -8.615850e-47 |
| Msa0767720 | Msa1251910 | 0.802789 | 4.749452e-49 | -8.615850e-47 |
| Msa0767720 | Msa1253000 | 0.803340 | 3.652861e-49 | -8.615850e-47 |
| Msa0767720 | Msa1260100 | 0.839767 | 1.301147e-57 | -8.615850e-47 |
| Msa0767720 | Msa1269670 | 0.870114 | 1.863197e-66 | -8.615850e-47 |
| Msa0767720 | Msa1270230 | 0.890252 | 1.165108e-73 | -8.615850e-47 |
| Msa0767720 | Msa1270240 | 0.872913 | 2.206523e-67 | -8.615850e-47 |
| Msa0767720 | Msa1270270 | 0.841797 | 3.820958e-58 | -8.615850e-47 |
| Msa0767720 | Msa1283330 | 0.868617 | 5.716848e-66 | -8.615850e-47 |
| Msa0767720 | Msa1284680 | 0.815717 | 8.011684e-52 | -8.615850e-47 |
| Msa0767720 | Msa1285930 | 0.899106 | 2.752217e-77 | -8.615850e-47 |
| Msa0767720 | Msa1287800 | 0.864655 | 1.040392e-64 | -8.615850e-47 |
| Msa0767720 | Msa1287810 | 0.881128 | 3.104645e-70 | -8.615850e-47 |
| Msa0767720 | Msa1287820 | 0.806893 | 6.592448e-50 | -8.615850e-47 |
| Msa0767720 | Msa1287830 | 0.804994 | 1.653261e-49 | -8.615850e-47 |
| Msa0767720 | Msa1289420 | 0.800186 | 1.621682e-48 | -8.615850e-47 |
| Msa0767720 | Msa1289430 | 0.851532 | 8.347203e-61 | -8.615850e-47 |
| Msa0767720 | Msa1297210 | 0.824091 | 9.740006e-54 | -8.615850e-47 |
| Msa0767720 | Msa1305480 | 0.807724 | 4.395069e-50 | -8.615850e-47 |
| Msa0767720 | Msa1307890 | 0.860107 | 2.600329e-63 | -8.615850e-47 |
| Msa0767720 | Msa1310120 | 0.826875 | 2.134270e-54 | -8.615850e-47 |
| Msa0767720 | Msa1314280 | 0.803040 | 4.214256e-49 | -8.615850e-47 |
| Msa0767720 | Msa1320300 | 0.843651 | 1.228717e-58 | -8.615850e-47 |
| Msa0767720 | Msa1340590 | 0.837929 | 3.887916e-57 | -8.615850e-47 |
| Msa0767720 | Msa1342200 | 0.838962 | 2.105526e-57 | -8.615850e-47 |
| Msa0767720 | Msa1344520 | 0.810187 | 1.306035e-50 | -8.615850e-47 |
| Msa0767720 | Msa1369430 | 0.816524 | 5.289367e-52 | -8.615850e-47 |
| Msa0767720 | Msa1382690 | 0.843202 | 1.619428e-58 | -8.615850e-47 |
| Msa0767720 | Msa1382700 | 0.812482 | 4.145878e-51 | -8.615850e-47 |
| Msa0767720 | Msa1397150 | 0.805619 | 1.222912e-49 | -8.615850e-47 |
| Msa0767720 | Msa1397580 | 0.831482 | 1.627768e-55 | -8.615850e-47 |
| Msa0767720 | Msa1397860 | 0.805016 | 1.636479e-49 | -8.615850e-47 |
| Msa0767720 | Msa1404000 | 0.868490 | 6.281338e-66 | -8.615850e-47 |
| Msa0767720 | Msa1408780 | 0.825497 | 4.539552e-54 | -8.615850e-47 |
| Msa0767720 | Msa1415310 | 0.853180 | 2.833522e-61 | -8.615850e-47 |
| Msa0767720 | Msa1422180 | 0.866109 | 3.624767e-65 | -8.615850e-47 |
| Msa0767720 | Msa1433120 | 0.876700 | 1.133418e-68 | -8.615850e-47 |
| Msa0767720 | Msa1451190 | 0.809398 | 1.930096e-50 | -8.615850e-47 |
| Msa0767720 | Msa1451570 | 0.800161 | 1.640654e-48 | -8.615850e-47 |
| Msa0123810 | Msa0767720 | 0.803629 | 3.181741e-49 | -8.615850e-47 |
| Msa0124100 | Msa0767720 | 0.806228 | 9.107911e-50 | -8.615850e-47 |
| Msa0135660 | Msa0767720 | 0.805864 | 1.086531e-49 | -8.615850e-47 |
| Msa0142220 | Msa0767720 | 0.868014 | 8.944123e-66 | -8.615850e-47 |
| Msa0145750 | Msa0767720 | 0.812699 | 3.717716e-51 | -8.615850e-47 |
| Msa0153910 | Msa0767720 | 0.856775 | 2.561058e-62 | -8.615850e-47 |
| Msa0188460 | Msa0767720 | 0.816207 | 6.229241e-52 | -8.615850e-47 |
| Msa0192970 | Msa0767720 | 0.802753 | 4.830983e-49 | -8.615850e-47 |
| Msa0198910 | Msa0767720 | 0.834003 | 3.851959e-56 | -8.615850e-47 |
| Msa0200000 | Msa0767720 | 0.823728 | 1.185045e-53 | -8.615850e-47 |
| Msa0227480 | Msa0767720 | 0.866097 | 3.656885e-65 | -8.615850e-47 |
| Msa0231000 | Msa0767720 | 0.833862 | 4.178432e-56 | -8.615850e-47 |
| Msa0232850 | Msa0767720 | 0.854462 | 1.211509e-61 | -8.615850e-47 |
| Msa0235140 | Msa0767720 | 0.832815 | 7.621475e-56 | -8.615850e-47 |
| Msa0365500 | Msa0767720 | 0.843520 | 1.332503e-58 | -8.615850e-47 |
| Msa0378360 | Msa0767720 | 0.823916 | 1.070427e-53 | -8.615850e-47 |
| Msa0384800 | Msa0767720 | 0.887775 | 1.060542e-72 | -8.615850e-47 |
| Msa0384890 | Msa0767720 | 0.812199 | 4.781046e-51 | -8.615850e-47 |
| Msa0394970 | Msa0767720 | 0.806565 | 7.734317e-50 | -8.615850e-47 |
| Msa0402290 | Msa0767720 | 0.803699 | 3.077057e-49 | -8.615850e-47 |
| Msa0406120 | Msa0767720 | 0.821462 | 3.987256e-53 | -8.615850e-47 |
| Msa0407750 | Msa0767720 | 0.820432 | 6.879819e-53 | -8.615850e-47 |
| Msa0414410 | Msa0767720 | 0.889699 | 1.916866e-73 | -8.615850e-47 |
| Msa0414420 | Msa0767720 | 0.879267 | 1.432452e-69 | -8.615850e-47 |
| Msa0423020 | Msa0767720 | 0.810906 | 9.132689e-51 | -8.615850e-47 |
| Msa0427710 | Msa0767720 | 0.820660 | 6.100653e-53 | -8.615850e-47 |
| Msa0428000 | Msa0767720 | 0.816469 | 5.441606e-52 | -8.615850e-47 |
| Msa0432290 | Msa0767720 | 0.807371 | 5.221896e-50 | -8.615850e-47 |
| Msa0435230 | Msa0767720 | 0.812602 | 3.903408e-51 | -8.615850e-47 |
| Msa0436780 | Msa0767720 | 0.828151 | 1.054393e-54 | -8.615850e-47 |
| Msa0436800 | Msa0767720 | 0.825980 | 3.487167e-54 | -8.615850e-47 |
| Msa0437990 | Msa0767720 | 0.801830 | 7.482450e-49 | -8.615850e-47 |
| Msa0438620 | Msa0767720 | 0.885966 | 5.153308e-72 | -8.615850e-47 |
| Msa0444130 | Msa0767720 | 0.815550 | 8.731057e-52 | -8.615850e-47 |
| Msa0445780 | Msa0767720 | 0.805776 | 1.133737e-49 | -8.615850e-47 |
| Msa0450000 | Msa0767720 | 0.815185 | 1.052379e-51 | -8.615850e-47 |
| Msa0450570 | Msa0767720 | 0.814602 | 1.416947e-51 | -8.615850e-47 |
| Msa0451730 | Msa0767720 | 0.812087 | 5.057101e-51 | -8.615850e-47 |
| Msa0452900 | Msa0767720 | 0.890562 | 8.808002e-74 | -8.615850e-47 |
| Msa0453120 | Msa0767720 | 0.848974 | 4.354087e-60 | -8.615850e-47 |
| Msa0454370 | Msa0767720 | 0.829847 | 4.093172e-55 | -8.615850e-47 |
| Msa0454910 | Msa0767720 | 0.853242 | 2.719116e-61 | -8.615850e-47 |
| Msa0459160 | Msa0767720 | 0.858610 | 7.317755e-63 | -8.615850e-47 |
| Msa0459170 | Msa0767720 | 0.831794 | 1.363981e-55 | -8.615850e-47 |
| Msa0466120 | Msa0767720 | 0.800527 | 1.382000e-48 | -8.615850e-47 |
| Msa0479340 | Msa0767720 | 0.808114 | 3.630265e-50 | -8.615850e-47 |
| Msa0251320 | Msa0767720 | 0.807562 | 4.758231e-50 | -8.615850e-47 |
| Msa0251640 | Msa0767720 | 0.824793 | 6.656765e-54 | -8.615850e-47 |
| Msa0267000 | Msa0767720 | 0.863021 | 3.350915e-64 | -8.615850e-47 |
| Msa0267010 | Msa0767720 | 0.866589 | 2.552180e-65 | -8.615850e-47 |
| Msa0270520 | Msa0767720 | 0.863275 | 2.796300e-64 | -8.615850e-47 |
| Msa0290870 | Msa0767720 | 0.801263 | 9.778525e-49 | -8.615850e-47 |
| Msa0300570 | Msa0767720 | 0.801589 | 8.385085e-49 | -8.615850e-47 |
| Msa0304170 | Msa0767720 | 0.866109 | 3.624036e-65 | -8.615850e-47 |
| Msa0306460 | Msa0767720 | 0.876089 | 1.842098e-68 | -8.615850e-47 |
| Msa0309020 | Msa0767720 | 0.824101 | 9.684405e-54 | -8.615850e-47 |
| Msa0313760 | Msa0767720 | 0.817511 | 3.175714e-52 | -8.615850e-47 |
| Msa0342240 | Msa0767720 | 0.858125 | 1.020841e-62 | -8.615850e-47 |
| Msa0355220 | Msa0767720 | 0.800607 | 1.331221e-48 | -8.615850e-47 |
| Msa0360510 | Msa0767720 | 0.853864 | 1.802407e-61 | -8.615850e-47 |
| Msa0363300 | Msa0767720 | 0.811141 | 8.121329e-51 | -8.615850e-47 |
| Msa0485030 | Msa0767720 | 0.800188 | 1.620231e-48 | -8.615850e-47 |
| Msa0485370 | Msa0767720 | 0.800164 | 1.638516e-48 | -8.615850e-47 |
| Msa0491590 | Msa0767720 | 0.841347 | 5.020418e-58 | -8.615850e-47 |
| Msa0502760 | Msa0767720 | 0.849853 | 2.476331e-60 | -8.615850e-47 |
| Msa0505080 | Msa0767720 | 0.809228 | 2.098440e-50 | -8.615850e-47 |
| Msa0506270 | Msa0767720 | 0.837740 | 4.349629e-57 | -8.615850e-47 |
| Msa0518540 | Msa0767720 | 0.840348 | 9.179558e-58 | -8.615850e-47 |
| Msa0534540 | Msa0767720 | 0.828968 | 6.693275e-55 | -8.615850e-47 |
| Msa0564890 | Msa0767720 | 0.863419 | 2.523048e-64 | -8.615850e-47 |
| Msa0596150 | Msa0767720 | 0.827416 | 1.583514e-54 | -8.615850e-47 |
| Msa0598780 | Msa0767720 | 0.814705 | 1.344533e-51 | -8.615850e-47 |
| Msa0600700 | Msa0767720 | 0.810893 | 9.189002e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767720 | MtrunA17_Chr2g0285481 | 63.987 | 311 | 108 | 3 | 13 | 321 | 14 | 322 | 6.70e-141 | 401 |
| Msa0767720 | MtrunA17_Chr1g0172741 | 63.987 | 311 | 108 | 3 | 13 | 321 | 14 | 322 | 2.00e-140 | 400 |
| Msa0767720 | MtrunA17_Chr8g0334551 | 57.057 | 333 | 126 | 4 | 1 | 321 | 1 | 328 | 7.36e-128 | 368 |
| Msa0767720 | MtrunA17_Chr2g0321391 | 67.213 | 244 | 77 | 2 | 79 | 321 | 3 | 244 | 8.60e-116 | 334 |
| Msa0767720 | MtrunA17_Chr5g0422701 | 65.672 | 201 | 66 | 2 | 122 | 321 | 14 | 212 | 6.88e-88 | 262 |
| Msa0767720 | MtrunA17_Chr2g0295811 | 41.410 | 227 | 103 | 6 | 119 | 321 | 10 | 230 | 8.03e-45 | 153 |
| Msa0767720 | MtrunA17_Chr5g0422691 | 60.870 | 92 | 35 | 1 | 13 | 103 | 14 | 105 | 1.50e-33 | 119 |
| Msa0767720 | MtrunA17_Chr2g0295611 | 61.458 | 96 | 36 | 1 | 100 | 194 | 1 | 96 | 2.82e-32 | 115 |
| Msa0767720 | MtrunA17_Chr8g0362511 | 28.479 | 309 | 186 | 9 | 21 | 310 | 67 | 359 | 2.47e-25 | 104 |
| Msa0767720 | MtrunA17_Chr5g0402821 | 27.937 | 315 | 199 | 9 | 22 | 315 | 16 | 323 | 9.36e-25 | 102 |
| Msa0767720 | MtrunA17_Chr3g0113081 | 28.477 | 302 | 168 | 9 | 12 | 311 | 373 | 628 | 1.38e-22 | 98.6 |
| Msa0767720 | MtrunA17_Chr3g0113081 | 38.931 | 131 | 79 | 1 | 22 | 152 | 185 | 314 | 2.71e-22 | 97.4 |
| Msa0767720 | MtrunA17_Chr3g0113081 | 34.677 | 124 | 80 | 1 | 21 | 144 | 7 | 129 | 2.50e-15 | 76.6 |
| Msa0767720 | MtrunA17_Chr6g0469501 | 65.517 | 58 | 20 | 0 | 264 | 321 | 1 | 58 | 1.57e-22 | 89.0 |
| Msa0767720 | MtrunA17_Chr5g0405761 | 28.667 | 300 | 182 | 8 | 19 | 312 | 47 | 320 | 3.40e-22 | 95.1 |
| Msa0767720 | MtrunA17_Chr8g0360271 | 24.915 | 293 | 184 | 11 | 33 | 310 | 21 | 292 | 4.62e-13 | 68.6 |
| Msa0767720 | MtrunA17_Chr1g0176881 | 28.346 | 127 | 90 | 1 | 20 | 146 | 191 | 316 | 8.51e-12 | 65.9 |
| Msa0767720 | MtrunA17_Chr1g0176881 | 26.471 | 136 | 99 | 1 | 21 | 156 | 21 | 155 | 2.59e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0767720 | AT5G05800.1 | 24.290 | 317 | 215 | 6 | 6 | 322 | 156 | 447 | 4.76e-21 | 93.6 |
| Msa0767720 | AT5G05800.1 | 34.234 | 111 | 72 | 1 | 20 | 130 | 2 | 111 | 2.35e-15 | 77.0 |
| Msa0767720 | AT5G05800.5 | 24.290 | 317 | 215 | 6 | 6 | 322 | 156 | 447 | 4.76e-21 | 93.6 |
| Msa0767720 | AT5G05800.5 | 34.234 | 111 | 72 | 1 | 20 | 130 | 2 | 111 | 2.35e-15 | 77.0 |
| Msa0767720 | AT5G05800.3 | 24.290 | 317 | 215 | 6 | 6 | 322 | 156 | 447 | 4.76e-21 | 93.6 |
| Msa0767720 | AT5G05800.3 | 34.234 | 111 | 72 | 1 | 20 | 130 | 2 | 111 | 2.35e-15 | 77.0 |
| Msa0767720 | AT5G05800.2 | 24.290 | 317 | 215 | 6 | 6 | 322 | 156 | 447 | 4.76e-21 | 93.6 |
| Msa0767720 | AT5G05800.2 | 34.234 | 111 | 72 | 1 | 20 | 130 | 2 | 111 | 2.35e-15 | 77.0 |
| Msa0767720 | AT5G05800.4 | 24.290 | 317 | 215 | 6 | 6 | 322 | 156 | 447 | 4.76e-21 | 93.6 |
| Msa0767720 | AT5G05800.4 | 34.234 | 111 | 72 | 1 | 20 | 130 | 2 | 111 | 2.35e-15 | 77.0 |
| Msa0767720 | AT3G11290.2 | 26.144 | 306 | 207 | 7 | 12 | 310 | 155 | 448 | 4.40e-16 | 79.0 |
| Msa0767720 | AT3G11290.1 | 26.144 | 306 | 207 | 7 | 12 | 310 | 155 | 448 | 4.40e-16 | 79.0 |
| Msa0767720 | AT2G24960.1 | 27.737 | 137 | 98 | 1 | 8 | 144 | 155 | 290 | 2.31e-12 | 68.2 |
| Msa0767720 | AT2G24960.2 | 27.737 | 137 | 98 | 1 | 8 | 144 | 155 | 290 | 2.71e-12 | 68.2 |
| Msa0767720 | AT2G24960.2 | 27.273 | 143 | 103 | 1 | 12 | 154 | 314 | 455 | 4.36e-11 | 64.3 |
| Msa0767720 | AT3G11310.1 | 32.168 | 143 | 91 | 2 | 20 | 157 | 171 | 312 | 4.19e-11 | 64.3 |
Find 66 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGCATGGTATAACTTATT+TGG | 0.134716 | 5_2:+31349422 | Msa0767720:CDS |
| ACAACTGAATTTGCAAATAT+TGG | 0.140047 | 5_2:+31349825 | Msa0767720:CDS |
| GGCAGAAAACAAAAGCTATT+TGG | 0.232374 | 5_2:+31349213 | Msa0767720:CDS |
| AACTTATTTGGGAGAGAAAC+TGG | 0.287945 | 5_2:+31349434 | Msa0767720:CDS |
| TTGGGAGAGAAACTGGATTA+GGG | 0.298488 | 5_2:+31349441 | Msa0767720:CDS |
| CAACTGAATTTGCAAATATT+GGG | 0.308854 | 5_2:+31349826 | Msa0767720:CDS |
| TTTGGGAGAGAAACTGGATT+AGG | 0.315464 | 5_2:+31349440 | Msa0767720:CDS |
| GAAATAAACATCTCCCTTGC+AGG | 0.323302 | 5_2:-31350116 | None:intergenic |
| AAACTTTGTGAAAGCATGTT+TGG | 0.334075 | 5_2:+31349253 | Msa0767720:CDS |
| GCAGAAAACAAAAGCTATTT+GGG | 0.339319 | 5_2:+31349214 | Msa0767720:CDS |
| TTTAAGGATGTAGTGGCTAA+TGG | 0.351555 | 5_2:+31349675 | Msa0767720:CDS |
| CGTACCAACACGTTCTCTAT+TGG | 0.354820 | 5_2:-31349285 | None:intergenic |
| GAGCATGGTATAACTTATTT+GGG | 0.363157 | 5_2:+31349423 | Msa0767720:CDS |
| TCTATTACATACCAGCTGTT+TGG | 0.363433 | 5_2:-31349513 | None:intergenic |
| CAGAGGAGAAGAGGTTGAAT+TGG | 0.373243 | 5_2:+31350150 | Msa0767720:CDS |
| GTTCGGTTAAATCATGAAAT+CGG | 0.390304 | 5_2:-31349343 | None:intergenic |
| GGTTCCTCCTCACCTAATGA+TGG | 0.395108 | 5_2:+31349188 | Msa0767720:CDS |
| TTGGTCTCCCACCACTCATC+AGG | 0.427119 | 5_2:-31349494 | None:intergenic |
| AGCCTTCTCATACTTCAGTT+CGG | 0.461572 | 5_2:-31349360 | None:intergenic |
| AGAAGGCTCAACTAAAGAAT+AGG | 0.479515 | 5_2:+31349375 | Msa0767720:CDS |
| GCTGCTGGTAATGCATCTAT+TGG | 0.486263 | 5_2:+31350005 | Msa0767720:CDS |
| GTTCCTCCTCACCTAATGAT+GGG | 0.491567 | 5_2:+31349189 | Msa0767720:CDS |
| GATGAGGCAGTGGCTGTAGA+AGG | 0.502147 | 5_2:+31349768 | Msa0767720:CDS |
| GTCAAAAGAGTGGTGAGAAA+AGG | 0.505016 | 5_2:+31349874 | Msa0767720:CDS |
| TGCTGATGTTTAAGCCTGCA+AGG | 0.517021 | 5_2:+31350102 | Msa0767720:CDS |
| TTCCTCCTCACCTAATGATG+GGG | 0.519823 | 5_2:+31349190 | Msa0767720:CDS |
| TGGCTAATGGAGAGTACACT+TGG | 0.522261 | 5_2:+31349688 | Msa0767720:CDS |
| GCAGTGGCTGTAGAAGGATC+TGG | 0.527670 | 5_2:+31349774 | Msa0767720:CDS |
| TCCTCCTCACCTAATGATGG+GGG | 0.527940 | 5_2:+31349191 | Msa0767720:CDS |
| ATGACAGTCTGAGAAAGGAT+TGG | 0.531322 | 5_2:+31349399 | Msa0767720:CDS |
| CTTCTCCTCTGAACCTCGTA+GGG | 0.535159 | 5_2:-31350138 | None:intergenic |
| TAGGTATGACAGTCTGAGAA+AGG | 0.543958 | 5_2:+31349394 | Msa0767720:CDS |
| AGGTTAGTCATGAATGGCAG+TGG | 0.548613 | 5_2:-31350194 | None:intergenic |
| TCACACAGGTTAGTCATGAA+TGG | 0.548759 | 5_2:-31350200 | None:intergenic |
| CGTTCTCGCAATGATGCTGC+TGG | 0.555390 | 5_2:+31349990 | Msa0767720:CDS |
| TATTTCCCTACGAGGTTCAG+AGG | 0.555424 | 5_2:+31350133 | Msa0767720:CDS |
| GGAGAGAAACTGGATTAGGG+TGG | 0.557144 | 5_2:+31349444 | Msa0767720:CDS |
| ATCATTTGAGACTTCATCCA+TGG | 0.558263 | 5_2:-31350051 | None:intergenic |
| CATGACTAACCTGTGTGACT+AGG | 0.563491 | 5_2:+31350205 | Msa0767720:CDS |
| TACGAGGTTCAGAGGAGAAG+AGG | 0.567800 | 5_2:+31350141 | Msa0767720:CDS |
| CATGGCAATACCCCACATGA+TGG | 0.569277 | 5_2:-31349714 | None:intergenic |
| TACACTTGGGCACCATCATG+TGG | 0.573130 | 5_2:+31349702 | Msa0767720:CDS |
| GTGGTTAACTCACTGGCGAA+TGG | 0.579267 | 5_2:-31349648 | None:intergenic |
| TGCATCTATTGGTGAAGTGA+TGG | 0.591393 | 5_2:+31350016 | Msa0767720:CDS |
| GCTGATGTTTAAGCCTGCAA+GGG | 0.594722 | 5_2:+31350103 | Msa0767720:CDS |
| TCTTCTCCTCTGAACCTCGT+AGG | 0.595412 | 5_2:-31350139 | None:intergenic |
| GATAGTGAGGATGCAAGTGT+TGG | 0.604914 | 5_2:+31349798 | Msa0767720:CDS |
| TGAGAAAGGATTGGAGAGCA+TGG | 0.612846 | 5_2:+31349408 | Msa0767720:CDS |
| AGAAGGATCTGGCGATAGTG+AGG | 0.613640 | 5_2:+31349785 | Msa0767720:CDS |
| GCTACAACAGTGTTGTTCAC+AGG | 0.614063 | 5_2:-31349470 | None:intergenic |
| CCTCCTCACCTAATGATGGG+GGG | 0.614154 | 5_2:+31349192 | Msa0767720:CDS |
| AACCGAACTGAAGTATGAGA+AGG | 0.615476 | 5_2:+31349358 | Msa0767720:CDS |
| GTGGTGGGAGACCAAACAGC+TGG | 0.618177 | 5_2:+31349502 | Msa0767720:CDS |
| ACACTTGGGCACCATCATGT+GGG | 0.626839 | 5_2:+31349703 | Msa0767720:CDS |
| TTGTAGCACCTGATGAGTGG+TGG | 0.632872 | 5_2:+31349486 | Msa0767720:CDS |
| GGTTAGTCATGAATGGCAGT+GGG | 0.638001 | 5_2:-31350193 | None:intergenic |
| CCCATACATCCTAGTCACAC+AGG | 0.638813 | 5_2:-31350214 | None:intergenic |
| GAGAGAAACTGGATTAGGGT+GGG | 0.643865 | 5_2:+31349445 | Msa0767720:CDS |
| CACTTGGGCACCATCATGTG+GGG | 0.646121 | 5_2:+31349704 | Msa0767720:CDS |
| TGTAGCACCTGATGAGTGGT+GGG | 0.651018 | 5_2:+31349487 | Msa0767720:CDS |
| GATGGCTGAGCTTCACACCA+TGG | 0.663371 | 5_2:+31350034 | Msa0767720:CDS |
| AAAACCGATGGTCAAAAGAG+TGG | 0.667696 | 5_2:+31349864 | Msa0767720:CDS |
| GTCTCCAATAGAGAACGTGT+TGG | 0.677392 | 5_2:+31349281 | Msa0767720:CDS |
| GGCTAATGGAGAGTACACTT+GGG | 0.684848 | 5_2:+31349689 | Msa0767720:CDS |
| CTGTTGTAGCACCTGATGAG+TGG | 0.705267 | 5_2:+31349483 | Msa0767720:CDS |
| GAGATGTTTATTTCCCTACG+AGG | 0.736446 | 5_2:+31350125 | Msa0767720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCCTAAATTTTTCATAAAGA+GGG | - | chr5_2:31349617-31349636 | None:intergenic | 20.0% |
| !!! | TTCCTAAATTTTTCATAAAG+AGG | - | chr5_2:31349618-31349637 | None:intergenic | 20.0% |
| !! | TTATGAAAAATTTAGGAACA+AGG | + | chr5_2:31349620-31349639 | Msa0767720:CDS | 20.0% |
| !! | TATGAAAAATTTAGGAACAA+GGG | + | chr5_2:31349621-31349640 | Msa0767720:CDS | 20.0% |
| !!! | TCCTAAATTTTTCATAAAGA+GGG | - | chr5_2:31349617-31349636 | None:intergenic | 20.0% |
| !!! | TTCCTAAATTTTTCATAAAG+AGG | - | chr5_2:31349618-31349637 | None:intergenic | 20.0% |
| !! | TTATGAAAAATTTAGGAACA+AGG | + | chr5_2:31349620-31349639 | Msa0767720:CDS | 20.0% |
| !! | TATGAAAAATTTAGGAACAA+GGG | + | chr5_2:31349621-31349640 | Msa0767720:CDS | 20.0% |
| ! | AATACCAAGAAAAATGTTGT+GGG | + | chr5_2:31349167-31349186 | Msa0767720:CDS | 25.0% |
| ! | AAAAGGGTGGAAAAATATTA+AGG | + | chr5_2:31349319-31349338 | Msa0767720:CDS | 25.0% |
| ! | AACACAAGTATACATATCTA+AGG | - | chr5_2:31349559-31349578 | None:intergenic | 25.0% |
| ! | ACCCTCTTTATGAAAAATTT+AGG | + | chr5_2:31349613-31349632 | Msa0767720:CDS | 25.0% |
| ! | ATGAAAAATTTAGGAACAAG+GGG | + | chr5_2:31349622-31349641 | Msa0767720:CDS | 25.0% |
| ! | ACAACTGAATTTGCAAATAT+TGG | + | chr5_2:31349825-31349844 | Msa0767720:CDS | 25.0% |
| ! | CAACTGAATTTGCAAATATT+GGG | + | chr5_2:31349826-31349845 | Msa0767720:CDS | 25.0% |
| !!! | ATGATCTTTATTTTCATGCT+CGG | + | chr5_2:31350069-31350088 | Msa0767720:CDS | 25.0% |
| ! | AATACCAAGAAAAATGTTGT+GGG | + | chr5_2:31349167-31349186 | Msa0767720:CDS | 25.0% |
| ! | AAAAGGGTGGAAAAATATTA+AGG | + | chr5_2:31349319-31349338 | Msa0767720:CDS | 25.0% |
| ! | AACACAAGTATACATATCTA+AGG | - | chr5_2:31349559-31349578 | None:intergenic | 25.0% |
| ! | ACCCTCTTTATGAAAAATTT+AGG | + | chr5_2:31349613-31349632 | Msa0767720:CDS | 25.0% |
| ! | ATGAAAAATTTAGGAACAAG+GGG | + | chr5_2:31349622-31349641 | Msa0767720:CDS | 25.0% |
| ! | ACAACTGAATTTGCAAATAT+TGG | + | chr5_2:31349825-31349844 | Msa0767720:CDS | 25.0% |
| ! | CAACTGAATTTGCAAATATT+GGG | + | chr5_2:31349826-31349845 | Msa0767720:CDS | 25.0% |
| !!! | ATGATCTTTATTTTCATGCT+CGG | + | chr5_2:31350069-31350088 | Msa0767720:CDS | 25.0% |
| GAATACCAAGAAAAATGTTG+TGG | + | chr5_2:31349166-31349185 | Msa0767720:CDS | 30.0% | |
| GCAGAAAACAAAAGCTATTT+GGG | + | chr5_2:31349214-31349233 | Msa0767720:CDS | 30.0% | |
| ! | AAACTTTGTGAAAGCATGTT+TGG | + | chr5_2:31349253-31349272 | Msa0767720:CDS | 30.0% |
| ! | GTACGAGCTTTTCAAAAAAA+GGG | + | chr5_2:31349303-31349322 | Msa0767720:CDS | 30.0% |
| GTTCGGTTAAATCATGAAAT+CGG | - | chr5_2:31349346-31349365 | None:intergenic | 30.0% | |
| AGAGCATGGTATAACTTATT+TGG | + | chr5_2:31349422-31349441 | Msa0767720:CDS | 30.0% | |
| GAGCATGGTATAACTTATTT+GGG | + | chr5_2:31349423-31349442 | Msa0767720:CDS | 30.0% | |
| !! | TGAGTTAACCACACTTTTTA+AGG | + | chr5_2:31349659-31349678 | Msa0767720:CDS | 30.0% |
| ! | TCATCATTTTCAAACACACA+TGG | - | chr5_2:31349735-31349754 | None:intergenic | 30.0% |
| ! | TGATAATGATGATGATGATG+AGG | + | chr5_2:31349752-31349771 | Msa0767720:CDS | 30.0% |
| AATTCTTCACAAAAAACCGA+TGG | + | chr5_2:31349852-31349871 | Msa0767720:CDS | 30.0% | |
| GAATACCAAGAAAAATGTTG+TGG | + | chr5_2:31349166-31349185 | Msa0767720:CDS | 30.0% | |
| GCAGAAAACAAAAGCTATTT+GGG | + | chr5_2:31349214-31349233 | Msa0767720:CDS | 30.0% | |
| ! | AAACTTTGTGAAAGCATGTT+TGG | + | chr5_2:31349253-31349272 | Msa0767720:CDS | 30.0% |
| ! | GTACGAGCTTTTCAAAAAAA+GGG | + | chr5_2:31349303-31349322 | Msa0767720:CDS | 30.0% |
| GTTCGGTTAAATCATGAAAT+CGG | - | chr5_2:31349346-31349365 | None:intergenic | 30.0% | |
| AGAGCATGGTATAACTTATT+TGG | + | chr5_2:31349422-31349441 | Msa0767720:CDS | 30.0% | |
| GAGCATGGTATAACTTATTT+GGG | + | chr5_2:31349423-31349442 | Msa0767720:CDS | 30.0% | |
| !! | TGAGTTAACCACACTTTTTA+AGG | + | chr5_2:31349659-31349678 | Msa0767720:CDS | 30.0% |
| ! | TCATCATTTTCAAACACACA+TGG | - | chr5_2:31349735-31349754 | None:intergenic | 30.0% |
| ! | TGATAATGATGATGATGATG+AGG | + | chr5_2:31349752-31349771 | Msa0767720:CDS | 30.0% |
| AATTCTTCACAAAAAACCGA+TGG | + | chr5_2:31349852-31349871 | Msa0767720:CDS | 30.0% | |
| GGCAGAAAACAAAAGCTATT+TGG | + | chr5_2:31349213-31349232 | Msa0767720:CDS | 35.0% | |
| ! | GGTACGAGCTTTTCAAAAAA+AGG | + | chr5_2:31349302-31349321 | Msa0767720:CDS | 35.0% |
| AGAAGGCTCAACTAAAGAAT+AGG | + | chr5_2:31349375-31349394 | Msa0767720:CDS | 35.0% | |
| AACTTATTTGGGAGAGAAAC+TGG | + | chr5_2:31349434-31349453 | Msa0767720:CDS | 35.0% | |
| TCTATTACATACCAGCTGTT+TGG | - | chr5_2:31349516-31349535 | None:intergenic | 35.0% | |
| GATGTGAGTTATGAAAATGC+AGG | + | chr5_2:31349587-31349606 | Msa0767720:intron | 35.0% | |
| ! | AAAAAGTGTGGTTAACTCAC+TGG | - | chr5_2:31349658-31349677 | None:intergenic | 35.0% |
| CACTACATCCTTAAAAAGTG+TGG | - | chr5_2:31349670-31349689 | None:intergenic | 35.0% | |
| !! | CACACTTTTTAAGGATGTAG+TGG | + | chr5_2:31349668-31349687 | Msa0767720:CDS | 35.0% |
| TTTAAGGATGTAGTGGCTAA+TGG | + | chr5_2:31349675-31349694 | Msa0767720:CDS | 35.0% | |
| !!! | GCACTTGCTTTTTTCTTACT+TGG | - | chr5_2:31349924-31349943 | None:intergenic | 35.0% |
| ! | ATCATTTGAGACTTCATCCA+TGG | - | chr5_2:31350054-31350073 | None:intergenic | 35.0% |
| GGCAGAAAACAAAAGCTATT+TGG | + | chr5_2:31349213-31349232 | Msa0767720:CDS | 35.0% | |
| ! | GGTACGAGCTTTTCAAAAAA+AGG | + | chr5_2:31349302-31349321 | Msa0767720:CDS | 35.0% |
| AGAAGGCTCAACTAAAGAAT+AGG | + | chr5_2:31349375-31349394 | Msa0767720:CDS | 35.0% | |
| AACTTATTTGGGAGAGAAAC+TGG | + | chr5_2:31349434-31349453 | Msa0767720:CDS | 35.0% | |
| TCTATTACATACCAGCTGTT+TGG | - | chr5_2:31349516-31349535 | None:intergenic | 35.0% | |
| GATGTGAGTTATGAAAATGC+AGG | + | chr5_2:31349587-31349606 | Msa0767720:intron | 35.0% | |
| ! | AAAAAGTGTGGTTAACTCAC+TGG | - | chr5_2:31349658-31349677 | None:intergenic | 35.0% |
| CACTACATCCTTAAAAAGTG+TGG | - | chr5_2:31349670-31349689 | None:intergenic | 35.0% | |
| !! | CACACTTTTTAAGGATGTAG+TGG | + | chr5_2:31349668-31349687 | Msa0767720:CDS | 35.0% |
| TTTAAGGATGTAGTGGCTAA+TGG | + | chr5_2:31349675-31349694 | Msa0767720:CDS | 35.0% | |
| !!! | GCACTTGCTTTTTTCTTACT+TGG | - | chr5_2:31349924-31349943 | None:intergenic | 35.0% |
| ! | ATCATTTGAGACTTCATCCA+TGG | - | chr5_2:31350054-31350073 | None:intergenic | 35.0% |
| ! | GGAACCCACAACATTTTTCT+TGG | - | chr5_2:31349174-31349193 | None:intergenic | 40.0% |
| ! | CGAGCTTTTCAAAAAAAGGG+TGG | + | chr5_2:31349306-31349325 | Msa0767720:CDS | 40.0% |
| AACCGAACTGAAGTATGAGA+AGG | + | chr5_2:31349358-31349377 | Msa0767720:CDS | 40.0% | |
| AGCCTTCTCATACTTCAGTT+CGG | - | chr5_2:31349363-31349382 | None:intergenic | 40.0% | |
| TAGGTATGACAGTCTGAGAA+AGG | + | chr5_2:31349394-31349413 | Msa0767720:CDS | 40.0% | |
| ATGACAGTCTGAGAAAGGAT+TGG | + | chr5_2:31349399-31349418 | Msa0767720:CDS | 40.0% | |
| TTTGGGAGAGAAACTGGATT+AGG | + | chr5_2:31349440-31349459 | Msa0767720:CDS | 40.0% | |
| TTGGGAGAGAAACTGGATTA+GGG | + | chr5_2:31349441-31349460 | Msa0767720:CDS | 40.0% | |
| AAAACCGATGGTCAAAAGAG+TGG | + | chr5_2:31349864-31349883 | Msa0767720:CDS | 40.0% | |
| GTCAAAAGAGTGGTGAGAAA+AGG | + | chr5_2:31349874-31349893 | Msa0767720:CDS | 40.0% | |
| TGCATCTATTGGTGAAGTGA+TGG | + | chr5_2:31350016-31350035 | Msa0767720:CDS | 40.0% | |
| GAAATAAACATCTCCCTTGC+AGG | - | chr5_2:31350119-31350138 | None:intergenic | 40.0% | |
| GAGATGTTTATTTCCCTACG+AGG | + | chr5_2:31350125-31350144 | Msa0767720:CDS | 40.0% | |
| ! | TCACACAGGTTAGTCATGAA+TGG | - | chr5_2:31350203-31350222 | None:intergenic | 40.0% |
| ! | GGAACCCACAACATTTTTCT+TGG | - | chr5_2:31349174-31349193 | None:intergenic | 40.0% |
| ! | CGAGCTTTTCAAAAAAAGGG+TGG | + | chr5_2:31349306-31349325 | Msa0767720:CDS | 40.0% |
| AACCGAACTGAAGTATGAGA+AGG | + | chr5_2:31349358-31349377 | Msa0767720:CDS | 40.0% | |
| AGCCTTCTCATACTTCAGTT+CGG | - | chr5_2:31349363-31349382 | None:intergenic | 40.0% | |
| TAGGTATGACAGTCTGAGAA+AGG | + | chr5_2:31349394-31349413 | Msa0767720:CDS | 40.0% | |
| ATGACAGTCTGAGAAAGGAT+TGG | + | chr5_2:31349399-31349418 | Msa0767720:CDS | 40.0% | |
| TTTGGGAGAGAAACTGGATT+AGG | + | chr5_2:31349440-31349459 | Msa0767720:CDS | 40.0% | |
| TTGGGAGAGAAACTGGATTA+GGG | + | chr5_2:31349441-31349460 | Msa0767720:CDS | 40.0% | |
| AAAACCGATGGTCAAAAGAG+TGG | + | chr5_2:31349864-31349883 | Msa0767720:CDS | 40.0% | |
| GTCAAAAGAGTGGTGAGAAA+AGG | + | chr5_2:31349874-31349893 | Msa0767720:CDS | 40.0% | |
| TGCATCTATTGGTGAAGTGA+TGG | + | chr5_2:31350016-31350035 | Msa0767720:CDS | 40.0% | |
| GAAATAAACATCTCCCTTGC+AGG | - | chr5_2:31350119-31350138 | None:intergenic | 40.0% | |
| GAGATGTTTATTTCCCTACG+AGG | + | chr5_2:31350125-31350144 | Msa0767720:CDS | 40.0% | |
| ! | TCACACAGGTTAGTCATGAA+TGG | - | chr5_2:31350203-31350222 | None:intergenic | 40.0% |
| GTTCCTCCTCACCTAATGAT+GGG | + | chr5_2:31349189-31349208 | Msa0767720:CDS | 45.0% | |
| TTCCTCCTCACCTAATGATG+GGG | + | chr5_2:31349190-31349209 | Msa0767720:CDS | 45.0% | |
| GTCTCCAATAGAGAACGTGT+TGG | + | chr5_2:31349281-31349300 | Msa0767720:CDS | 45.0% | |
| CGTACCAACACGTTCTCTAT+TGG | - | chr5_2:31349288-31349307 | None:intergenic | 45.0% | |
| TGAGAAAGGATTGGAGAGCA+TGG | + | chr5_2:31349408-31349427 | Msa0767720:CDS | 45.0% | |
| ! | GAGAGAAACTGGATTAGGGT+GGG | + | chr5_2:31349445-31349464 | Msa0767720:CDS | 45.0% |
| ! | GCTACAACAGTGTTGTTCAC+AGG | - | chr5_2:31349473-31349492 | None:intergenic | 45.0% |
| ! | TGGCTAATGGAGAGTACACT+TGG | + | chr5_2:31349688-31349707 | Msa0767720:CDS | 45.0% |
| ! | GGCTAATGGAGAGTACACTT+GGG | + | chr5_2:31349689-31349708 | Msa0767720:CDS | 45.0% |
| ! | TGATGATGATGATGAGGCAG+TGG | + | chr5_2:31349758-31349777 | Msa0767720:CDS | 45.0% |
| GATAGTGAGGATGCAAGTGT+TGG | + | chr5_2:31349798-31349817 | Msa0767720:CDS | 45.0% | |
| ! | CTCACCACTCTTTTGACCAT+CGG | - | chr5_2:31349871-31349890 | None:intergenic | 45.0% |
| ! | GCTGCTGGTAATGCATCTAT+TGG | + | chr5_2:31350005-31350024 | Msa0767720:CDS | 45.0% |
| TGCTGATGTTTAAGCCTGCA+AGG | + | chr5_2:31350102-31350121 | Msa0767720:CDS | 45.0% | |
| GCTGATGTTTAAGCCTGCAA+GGG | + | chr5_2:31350103-31350122 | Msa0767720:CDS | 45.0% | |
| TATTTCCCTACGAGGTTCAG+AGG | + | chr5_2:31350133-31350152 | Msa0767720:CDS | 45.0% | |
| CAGAGGAGAAGAGGTTGAAT+TGG | + | chr5_2:31350150-31350169 | Msa0767720:CDS | 45.0% | |
| ! | GGTTAGTCATGAATGGCAGT+GGG | - | chr5_2:31350196-31350215 | None:intergenic | 45.0% |
| ! | AGGTTAGTCATGAATGGCAG+TGG | - | chr5_2:31350197-31350216 | None:intergenic | 45.0% |
| GTTCCTCCTCACCTAATGAT+GGG | + | chr5_2:31349189-31349208 | Msa0767720:CDS | 45.0% | |
| TTCCTCCTCACCTAATGATG+GGG | + | chr5_2:31349190-31349209 | Msa0767720:CDS | 45.0% | |
| GTCTCCAATAGAGAACGTGT+TGG | + | chr5_2:31349281-31349300 | Msa0767720:CDS | 45.0% | |
| CGTACCAACACGTTCTCTAT+TGG | - | chr5_2:31349288-31349307 | None:intergenic | 45.0% | |
| TGAGAAAGGATTGGAGAGCA+TGG | + | chr5_2:31349408-31349427 | Msa0767720:CDS | 45.0% | |
| ! | GAGAGAAACTGGATTAGGGT+GGG | + | chr5_2:31349445-31349464 | Msa0767720:CDS | 45.0% |
| ! | GCTACAACAGTGTTGTTCAC+AGG | - | chr5_2:31349473-31349492 | None:intergenic | 45.0% |
| ! | TGGCTAATGGAGAGTACACT+TGG | + | chr5_2:31349688-31349707 | Msa0767720:CDS | 45.0% |
| ! | GGCTAATGGAGAGTACACTT+GGG | + | chr5_2:31349689-31349708 | Msa0767720:CDS | 45.0% |
| ! | TGATGATGATGATGAGGCAG+TGG | + | chr5_2:31349758-31349777 | Msa0767720:CDS | 45.0% |
| GATAGTGAGGATGCAAGTGT+TGG | + | chr5_2:31349798-31349817 | Msa0767720:CDS | 45.0% | |
| ! | CTCACCACTCTTTTGACCAT+CGG | - | chr5_2:31349871-31349890 | None:intergenic | 45.0% |
| ! | GCTGCTGGTAATGCATCTAT+TGG | + | chr5_2:31350005-31350024 | Msa0767720:CDS | 45.0% |
| TGCTGATGTTTAAGCCTGCA+AGG | + | chr5_2:31350102-31350121 | Msa0767720:CDS | 45.0% | |
| GCTGATGTTTAAGCCTGCAA+GGG | + | chr5_2:31350103-31350122 | Msa0767720:CDS | 45.0% | |
| TATTTCCCTACGAGGTTCAG+AGG | + | chr5_2:31350133-31350152 | Msa0767720:CDS | 45.0% | |
| CAGAGGAGAAGAGGTTGAAT+TGG | + | chr5_2:31350150-31350169 | Msa0767720:CDS | 45.0% | |
| ! | GGTTAGTCATGAATGGCAGT+GGG | - | chr5_2:31350196-31350215 | None:intergenic | 45.0% |
| ! | AGGTTAGTCATGAATGGCAG+TGG | - | chr5_2:31350197-31350216 | None:intergenic | 45.0% |
| GGTTCCTCCTCACCTAATGA+TGG | + | chr5_2:31349188-31349207 | Msa0767720:CDS | 50.0% | |
| TCCTCCTCACCTAATGATGG+GGG | + | chr5_2:31349191-31349210 | Msa0767720:CDS | 50.0% | |
| ! | GTTTTCTGCCCCCCATCATT+AGG | - | chr5_2:31349203-31349222 | None:intergenic | 50.0% |
| ! | GGAGAGAAACTGGATTAGGG+TGG | + | chr5_2:31349444-31349463 | Msa0767720:CDS | 50.0% |
| CTGTTGTAGCACCTGATGAG+TGG | + | chr5_2:31349483-31349502 | Msa0767720:CDS | 50.0% | |
| TTGTAGCACCTGATGAGTGG+TGG | + | chr5_2:31349486-31349505 | Msa0767720:CDS | 50.0% | |
| TGTAGCACCTGATGAGTGGT+GGG | + | chr5_2:31349487-31349506 | Msa0767720:CDS | 50.0% | |
| GTGGTTAACTCACTGGCGAA+TGG | - | chr5_2:31349651-31349670 | None:intergenic | 50.0% | |
| TACACTTGGGCACCATCATG+TGG | + | chr5_2:31349702-31349721 | Msa0767720:CDS | 50.0% | |
| ACACTTGGGCACCATCATGT+GGG | + | chr5_2:31349703-31349722 | Msa0767720:CDS | 50.0% | |
| CATGGCAATACCCCACATGA+TGG | - | chr5_2:31349717-31349736 | None:intergenic | 50.0% | |
| AGAAGGATCTGGCGATAGTG+AGG | + | chr5_2:31349785-31349804 | Msa0767720:CDS | 50.0% | |
| CTTCTCCTCTGAACCTCGTA+GGG | - | chr5_2:31350141-31350160 | None:intergenic | 50.0% | |
| TCTTCTCCTCTGAACCTCGT+AGG | - | chr5_2:31350142-31350161 | None:intergenic | 50.0% | |
| TACGAGGTTCAGAGGAGAAG+AGG | + | chr5_2:31350141-31350160 | Msa0767720:CDS | 50.0% | |
| GGTTCCTCCTCACCTAATGA+TGG | + | chr5_2:31349188-31349207 | Msa0767720:CDS | 50.0% | |
| TCCTCCTCACCTAATGATGG+GGG | + | chr5_2:31349191-31349210 | Msa0767720:CDS | 50.0% | |
| ! | GTTTTCTGCCCCCCATCATT+AGG | - | chr5_2:31349203-31349222 | None:intergenic | 50.0% |
| ! | GGAGAGAAACTGGATTAGGG+TGG | + | chr5_2:31349444-31349463 | Msa0767720:CDS | 50.0% |
| CTGTTGTAGCACCTGATGAG+TGG | + | chr5_2:31349483-31349502 | Msa0767720:CDS | 50.0% | |
| TTGTAGCACCTGATGAGTGG+TGG | + | chr5_2:31349486-31349505 | Msa0767720:CDS | 50.0% | |
| TGTAGCACCTGATGAGTGGT+GGG | + | chr5_2:31349487-31349506 | Msa0767720:CDS | 50.0% | |
| GTGGTTAACTCACTGGCGAA+TGG | - | chr5_2:31349651-31349670 | None:intergenic | 50.0% | |
| TACACTTGGGCACCATCATG+TGG | + | chr5_2:31349702-31349721 | Msa0767720:CDS | 50.0% | |
| ACACTTGGGCACCATCATGT+GGG | + | chr5_2:31349703-31349722 | Msa0767720:CDS | 50.0% | |
| CATGGCAATACCCCACATGA+TGG | - | chr5_2:31349717-31349736 | None:intergenic | 50.0% | |
| AGAAGGATCTGGCGATAGTG+AGG | + | chr5_2:31349785-31349804 | Msa0767720:CDS | 50.0% | |
| CTTCTCCTCTGAACCTCGTA+GGG | - | chr5_2:31350141-31350160 | None:intergenic | 50.0% | |
| TCTTCTCCTCTGAACCTCGT+AGG | - | chr5_2:31350142-31350161 | None:intergenic | 50.0% | |
| TACGAGGTTCAGAGGAGAAG+AGG | + | chr5_2:31350141-31350160 | Msa0767720:CDS | 50.0% | |
| ! | CCTCCTCACCTAATGATGGG+GGG | + | chr5_2:31349192-31349211 | Msa0767720:CDS | 55.0% |
| TTGGTCTCCCACCACTCATC+AGG | - | chr5_2:31349497-31349516 | None:intergenic | 55.0% | |
| CACTTGGGCACCATCATGTG+GGG | + | chr5_2:31349704-31349723 | Msa0767720:CDS | 55.0% | |
| GATGAGGCAGTGGCTGTAGA+AGG | + | chr5_2:31349768-31349787 | Msa0767720:CDS | 55.0% | |
| GCAGTGGCTGTAGAAGGATC+TGG | + | chr5_2:31349774-31349793 | Msa0767720:CDS | 55.0% | |
| CGTTCTCGCAATGATGCTGC+TGG | + | chr5_2:31349990-31350009 | Msa0767720:CDS | 55.0% | |
| GATGGCTGAGCTTCACACCA+TGG | + | chr5_2:31350034-31350053 | Msa0767720:CDS | 55.0% | |
| ! | CCTCCTCACCTAATGATGGG+GGG | + | chr5_2:31349192-31349211 | Msa0767720:CDS | 55.0% |
| TTGGTCTCCCACCACTCATC+AGG | - | chr5_2:31349497-31349516 | None:intergenic | 55.0% | |
| CACTTGGGCACCATCATGTG+GGG | + | chr5_2:31349704-31349723 | Msa0767720:CDS | 55.0% | |
| GATGAGGCAGTGGCTGTAGA+AGG | + | chr5_2:31349768-31349787 | Msa0767720:CDS | 55.0% | |
| GCAGTGGCTGTAGAAGGATC+TGG | + | chr5_2:31349774-31349793 | Msa0767720:CDS | 55.0% | |
| CGTTCTCGCAATGATGCTGC+TGG | + | chr5_2:31349990-31350009 | Msa0767720:CDS | 55.0% | |
| GATGGCTGAGCTTCACACCA+TGG | + | chr5_2:31350034-31350053 | Msa0767720:CDS | 55.0% | |
| CCCCCCATCATTAGGTGAGG+AGG | - | chr5_2:31349195-31349214 | None:intergenic | 60.0% | |
| CTGCCCCCCATCATTAGGTG+AGG | - | chr5_2:31349198-31349217 | None:intergenic | 60.0% | |
| ! | GTGGTGGGAGACCAAACAGC+TGG | + | chr5_2:31349502-31349521 | Msa0767720:CDS | 60.0% |
| CCCCCCATCATTAGGTGAGG+AGG | - | chr5_2:31349195-31349214 | None:intergenic | 60.0% | |
| CTGCCCCCCATCATTAGGTG+AGG | - | chr5_2:31349198-31349217 | None:intergenic | 60.0% | |
| ! | GTGGTGGGAGACCAAACAGC+TGG | + | chr5_2:31349502-31349521 | Msa0767720:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 31349161 | 31350226 | 31349161 | ID=Msa0767720;Name=Msa0767720 |
| chr5_2 | mRNA | 31349161 | 31350226 | 31349161 | ID=Msa0767720-mRNA-1;Parent=Msa0767720;Name=Msa0767720-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|0|1|1|1|2|0|326 |
| chr5_2 | exon | 31349161 | 31349523 | 31349161 | ID=Msa0767720-mRNA-1:exon:11603;Parent=Msa0767720-mRNA-1 |
| chr5_2 | exon | 31349609 | 31350226 | 31349609 | ID=Msa0767720-mRNA-1:exon:11604;Parent=Msa0767720-mRNA-1 |
| chr5_2 | CDS | 31349161 | 31349523 | 31349161 | ID=Msa0767720-mRNA-1:cds;Parent=Msa0767720-mRNA-1 |
| chr5_2 | CDS | 31349609 | 31350226 | 31349609 | ID=Msa0767720-mRNA-1:cds;Parent=Msa0767720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
