Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382690 | XP_003602666.1 | 95.418 | 371 | 17 | 0 | 1 | 371 | 1 | 371 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382690 | sp|Q38967|AAP2_ARATH | 66.298 | 362 | 119 | 1 | 13 | 371 | 25 | 386 | 8.15e-180 | 511 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382690 | G7JC68 | 95.418 | 371 | 17 | 0 | 1 | 371 | 1 | 371 | 0.0 | 738 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa1382690 | 0.807957 | 3.920526e-50 | -8.615850e-47 |
| Msa0016570 | Msa1382690 | 0.820181 | 7.856247e-53 | -8.615850e-47 |
| Msa0016580 | Msa1382690 | 0.822958 | 1.792564e-53 | -8.615850e-47 |
| Msa0071500 | Msa1382690 | 0.815829 | 7.565647e-52 | -8.615850e-47 |
| Msa0102070 | Msa1382690 | 0.831811 | 1.350696e-55 | -8.615850e-47 |
| Msa0110270 | Msa1382690 | 0.808323 | 3.277827e-50 | -8.615850e-47 |
| Msa1382690 | Msa1382700 | 0.841850 | 3.700588e-58 | -8.615850e-47 |
| Msa1382690 | Msa1397580 | 0.808120 | 3.620008e-50 | -8.615850e-47 |
| Msa1382690 | Msa1404000 | 0.825474 | 4.597578e-54 | -8.615850e-47 |
| Msa1382690 | Msa1415310 | 0.818455 | 1.943201e-52 | -8.615850e-47 |
| Msa1382690 | Msa1422180 | 0.820324 | 7.285454e-53 | -8.615850e-47 |
| Msa1382690 | Msa1433120 | 0.822762 | 1.991212e-53 | -8.615850e-47 |
| Msa0604350 | Msa1382690 | 0.807788 | 4.260576e-50 | -8.615850e-47 |
| Msa0636170 | Msa1382690 | 0.824802 | 6.624253e-54 | -8.615850e-47 |
| Msa0639610 | Msa1382690 | 0.830446 | 2.923643e-55 | -8.615850e-47 |
| Msa0678930 | Msa1382690 | 0.815933 | 7.170162e-52 | -8.615850e-47 |
| Msa0694370 | Msa1382690 | 0.802078 | 6.654746e-49 | -8.615850e-47 |
| Msa0725850 | Msa1382690 | 0.812464 | 4.184303e-51 | -8.615850e-47 |
| Msa0726140 | Msa1382690 | 0.816955 | 4.235687e-52 | -8.615850e-47 |
| Msa0729800 | Msa1382690 | 0.843416 | 1.420308e-58 | -8.615850e-47 |
| Msa0733290 | Msa1382690 | 0.813806 | 2.123663e-51 | -8.615850e-47 |
| Msa0741990 | Msa1382690 | 0.803146 | 4.005880e-49 | -8.615850e-47 |
| Msa0743810 | Msa1382690 | 0.817470 | 3.242850e-52 | -8.615850e-47 |
| Msa0745060 | Msa1382690 | 0.824741 | 6.848324e-54 | -8.615850e-47 |
| Msa0766630 | Msa1382690 | 0.803931 | 2.753910e-49 | -8.615850e-47 |
| Msa0767720 | Msa1382690 | 0.843202 | 1.619428e-58 | -8.615850e-47 |
| Msa0783160 | Msa1382690 | 0.856830 | 2.467238e-62 | -8.615850e-47 |
| Msa0787600 | Msa1382690 | 0.820302 | 7.369195e-53 | -8.615850e-47 |
| Msa0808010 | Msa1382690 | 0.836910 | 7.093599e-57 | -8.615850e-47 |
| Msa0808020 | Msa1382690 | 0.831520 | 1.593074e-55 | -8.615850e-47 |
| Msa0811080 | Msa1382690 | 0.834542 | 2.822870e-56 | -8.615850e-47 |
| Msa0811270 | Msa1382690 | 0.809397 | 1.931329e-50 | -8.615850e-47 |
| Msa0824590 | Msa1382690 | 0.804413 | 2.185748e-49 | -8.615850e-47 |
| Msa0825860 | Msa1382690 | 0.821308 | 4.326083e-53 | -8.615850e-47 |
| Msa0833290 | Msa1382690 | 0.809841 | 1.549785e-50 | -8.615850e-47 |
| Msa0142220 | Msa1382690 | 0.849245 | 3.659479e-60 | -8.615850e-47 |
| Msa0153910 | Msa1382690 | 0.813310 | 2.730279e-51 | -8.615850e-47 |
| Msa0200000 | Msa1382690 | 0.811378 | 7.212776e-51 | -8.615850e-47 |
| Msa0208090 | Msa1382690 | 0.800946 | 1.135455e-48 | -8.615850e-47 |
| Msa0227480 | Msa1382690 | 0.861328 | 1.108328e-63 | -8.615850e-47 |
| Msa1251910 | Msa1382690 | 0.803893 | 2.805200e-49 | -8.615850e-47 |
| Msa1269670 | Msa1382690 | 0.823719 | 1.190705e-53 | -8.615850e-47 |
| Msa1270230 | Msa1382690 | 0.830597 | 2.684668e-55 | -8.615850e-47 |
| Msa1270240 | Msa1382690 | 0.823356 | 1.447627e-53 | -8.615850e-47 |
| Msa1270270 | Msa1382690 | 0.818840 | 1.588600e-52 | -8.615850e-47 |
| Msa1283330 | Msa1382690 | 0.852881 | 3.449376e-61 | -8.615850e-47 |
| Msa1285930 | Msa1382690 | 0.861518 | 9.700102e-64 | -8.615850e-47 |
| Msa1287800 | Msa1382690 | 0.827207 | 1.776803e-54 | -8.615850e-47 |
| Msa1287810 | Msa1382690 | 0.839588 | 1.448338e-57 | -8.615850e-47 |
| Msa1289430 | Msa1382690 | 0.806488 | 8.030421e-50 | -8.615850e-47 |
| Msa1340590 | Msa1382690 | 0.817940 | 2.540606e-52 | -8.615850e-47 |
| Msa0365500 | Msa1382690 | 0.806578 | 7.685414e-50 | -8.615850e-47 |
| Msa0378360 | Msa1382690 | 0.933809 | 1.065030e-95 | -8.615850e-47 |
| Msa0384800 | Msa1382690 | 0.828067 | 1.104764e-54 | -8.615850e-47 |
| Msa0384890 | Msa1382690 | 0.819773 | 9.741147e-53 | -8.615850e-47 |
| Msa0407750 | Msa1382690 | 0.812204 | 4.768849e-51 | -8.615850e-47 |
| Msa0414410 | Msa1382690 | 0.823874 | 1.094974e-53 | -8.615850e-47 |
| Msa0414420 | Msa1382690 | 0.836767 | 7.715048e-57 | -8.615850e-47 |
| Msa0423020 | Msa1382690 | 0.800001 | 1.768448e-48 | -8.615850e-47 |
| Msa0427710 | Msa1382690 | 0.938690 | 4.434340e-99 | -8.615850e-47 |
| Msa0428000 | Msa1382690 | 0.927225 | 1.581229e-91 | -8.615850e-47 |
| Msa0428010 | Msa1382690 | 0.834807 | 2.420902e-56 | -8.615850e-47 |
| Msa0435230 | Msa1382690 | 0.804655 | 1.946210e-49 | -8.615850e-47 |
| Msa0436800 | Msa1382690 | 0.816845 | 4.482088e-52 | -8.615850e-47 |
| Msa0438620 | Msa1382690 | 0.809658 | 1.697367e-50 | -8.615850e-47 |
| Msa0444130 | Msa1382690 | 0.813575 | 2.387808e-51 | -8.615850e-47 |
| Msa0450000 | Msa1382690 | 0.826193 | 3.103307e-54 | -8.615850e-47 |
| Msa0452900 | Msa1382690 | 0.849720 | 2.697517e-60 | -8.615850e-47 |
| Msa0454910 | Msa1382690 | 0.801425 | 9.059198e-49 | -8.615850e-47 |
| Msa0479340 | Msa1382690 | 0.809395 | 1.933177e-50 | -8.615850e-47 |
| Msa0981370 | Msa1382690 | 0.806230 | 9.101629e-50 | -8.615850e-47 |
| Msa0989060 | Msa1382690 | 0.818937 | 1.510279e-52 | -8.615850e-47 |
| Msa1016280 | Msa1382690 | 0.845645 | 3.568516e-59 | -8.615850e-47 |
| Msa1025360 | Msa1382690 | 0.828870 | 7.070419e-55 | -8.615850e-47 |
| Msa1025370 | Msa1382690 | 0.820137 | 8.041132e-53 | -8.615850e-47 |
| Msa1044830 | Msa1382690 | 0.824124 | 9.565350e-54 | -8.615850e-47 |
| Msa1044840 | Msa1382690 | 0.829474 | 5.045022e-55 | -8.615850e-47 |
| Msa1092990 | Msa1382690 | 0.813540 | 2.430287e-51 | -8.615850e-47 |
| Msa1100980 | Msa1382690 | 0.867293 | 1.522729e-65 | -8.615850e-47 |
| Msa0267000 | Msa1382690 | 0.815953 | 7.096884e-52 | -8.615850e-47 |
| Msa0267010 | Msa1382690 | 0.820282 | 7.447590e-53 | -8.615850e-47 |
| Msa0270520 | Msa1382690 | 0.824096 | 9.712731e-54 | -8.615850e-47 |
| Msa0304170 | Msa1382690 | 0.818759 | 1.657558e-52 | -8.615850e-47 |
| Msa0306460 | Msa1382690 | 0.820529 | 6.537529e-53 | -8.615850e-47 |
| Msa0337900 | Msa1382690 | 0.819627 | 1.051387e-52 | -8.615850e-47 |
| Msa0342240 | Msa1382690 | 0.824686 | 7.057638e-54 | -8.615850e-47 |
| Msa0360510 | Msa1382690 | 0.844504 | 7.259121e-59 | -8.615850e-47 |
| Msa1109440 | Msa1382690 | 0.811870 | 5.639320e-51 | -8.615850e-47 |
| Msa1111150 | Msa1382690 | 0.812044 | 5.166896e-51 | -8.615850e-47 |
| Msa1121200 | Msa1382690 | 0.831526 | 1.587809e-55 | -8.615850e-47 |
| Msa1135740 | Msa1382690 | 0.844217 | 8.668043e-59 | -8.615850e-47 |
| Msa1137690 | Msa1382690 | 0.802181 | 6.335805e-49 | -8.615850e-47 |
| Msa1146100 | Msa1382690 | 0.807028 | 6.172474e-50 | -8.615850e-47 |
| Msa1146110 | Msa1382690 | 0.832079 | 1.160051e-55 | -8.615850e-47 |
| Msa1187940 | Msa1382690 | 0.833445 | 5.310356e-56 | -8.615850e-47 |
| Msa1187950 | Msa1382690 | 0.842556 | 2.405603e-58 | -8.615850e-47 |
| Msa1192640 | Msa1382690 | 0.840890 | 6.619466e-58 | -8.615850e-47 |
| Msa0491590 | Msa1382690 | 0.810784 | 9.704494e-51 | -8.615850e-47 |
| Msa0518540 | Msa1382690 | 0.940775 | 1.309309e-100 | -8.615850e-47 |
| Msa0564890 | Msa1382690 | 0.813072 | 3.079851e-51 | -8.615850e-47 |
| Msa0600700 | Msa1382690 | 0.822802 | 1.949667e-53 | -8.615850e-47 |
| Msa0846210 | Msa1382690 | 0.801010 | 1.101370e-48 | -8.615850e-47 |
| Msa0846330 | Msa1382690 | 0.801924 | 7.155456e-49 | -8.615850e-47 |
| Msa0846350 | Msa1382690 | 0.816824 | 4.531151e-52 | -8.615850e-47 |
| Msa0848960 | Msa1382690 | 0.802779 | 4.772088e-49 | -8.615850e-47 |
| Msa0858980 | Msa1382690 | 0.843766 | 1.145321e-58 | -8.615850e-47 |
| Msa0865320 | Msa1382690 | 0.818615 | 1.787575e-52 | -8.615850e-47 |
| Msa0885290 | Msa1382690 | 0.825831 | 3.781427e-54 | -8.615850e-47 |
| Msa0888370 | Msa1382690 | 0.802580 | 5.244354e-49 | -8.615850e-47 |
| Msa0896080 | Msa1382690 | 0.809658 | 1.696804e-50 | -8.615850e-47 |
| Msa0907260 | Msa1382690 | 0.828621 | 8.122231e-55 | -8.615850e-47 |
| Msa0956270 | Msa1382690 | 0.840940 | 6.423273e-58 | -8.615850e-47 |
| Msa0979410 | Msa1382690 | 0.810440 | 1.151430e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382690 | MtrunA17_Chr3g0130641 | 95.418 | 371 | 17 | 0 | 1 | 371 | 1 | 371 | 0.0 | 738 |
| Msa1382690 | MtrunA17_Chr3g0130651 | 70.637 | 361 | 104 | 1 | 11 | 371 | 4 | 362 | 0.0 | 536 |
| Msa1382690 | MtrunA17_Chr8g0384661 | 69.388 | 343 | 105 | 0 | 27 | 369 | 44 | 386 | 1.58e-176 | 500 |
| Msa1382690 | MtrunA17_Chr3g0125081 | 62.198 | 373 | 135 | 3 | 1 | 369 | 1 | 371 | 5.11e-172 | 488 |
| Msa1382690 | MtrunA17_Chr3g0125091 | 63.102 | 374 | 131 | 4 | 1 | 369 | 1 | 372 | 1.84e-171 | 486 |
| Msa1382690 | MtrunA17_Chr1g0159761 | 65.994 | 347 | 115 | 1 | 26 | 369 | 20 | 366 | 2.56e-169 | 481 |
| Msa1382690 | MtrunA17_Chr3g0125101 | 61.230 | 374 | 138 | 4 | 1 | 369 | 1 | 372 | 2.29e-167 | 476 |
| Msa1382690 | MtrunA17_Chr4g0037201 | 60.212 | 377 | 138 | 3 | 5 | 369 | 28 | 404 | 8.96e-167 | 476 |
| Msa1382690 | MtrunA17_Chr1g0146491 | 54.294 | 361 | 158 | 4 | 18 | 371 | 6 | 366 | 9.06e-145 | 419 |
| Msa1382690 | MtrunA17_Chr3g0140761 | 52.926 | 376 | 170 | 5 | 1 | 370 | 1 | 375 | 3.28e-144 | 417 |
| Msa1382690 | MtrunA17_Chr1g0146411 | 50.000 | 360 | 178 | 2 | 1 | 360 | 1 | 358 | 6.53e-128 | 375 |
| Msa1382690 | MtrunA17_Chr3g0103231 | 49.425 | 348 | 171 | 2 | 26 | 370 | 16 | 361 | 6.68e-126 | 370 |
| Msa1382690 | MtrunA17_Chr1g0206871 | 50.997 | 351 | 158 | 4 | 33 | 370 | 15 | 364 | 3.21e-125 | 369 |
| Msa1382690 | MtrunA17_Chr3g0103211 | 50.575 | 348 | 167 | 2 | 26 | 370 | 16 | 361 | 1.62e-123 | 364 |
| Msa1382690 | MtrunA17_Chr1g0206821 | 46.829 | 410 | 153 | 5 | 26 | 370 | 15 | 424 | 3.17e-123 | 365 |
| Msa1382690 | MtrunA17_Chr3g0103271 | 51.136 | 352 | 169 | 2 | 10 | 360 | 4 | 353 | 1.41e-118 | 352 |
| Msa1382690 | MtrunA17_Chr5g0402151 | 60.339 | 295 | 84 | 3 | 36 | 330 | 3 | 264 | 3.70e-117 | 341 |
| Msa1382690 | MtrunA17_Chr3g0103221 | 47.384 | 344 | 176 | 2 | 30 | 370 | 27 | 368 | 5.32e-117 | 347 |
| Msa1382690 | MtrunA17_Chr5g0447221 | 44.882 | 381 | 197 | 6 | 2 | 375 | 1 | 375 | 3.44e-114 | 340 |
| Msa1382690 | MtrunA17_Chr3g0140531 | 47.550 | 347 | 173 | 3 | 24 | 365 | 15 | 357 | 1.59e-113 | 339 |
| Msa1382690 | MtrunA17_Chr3g0140541 | 48.588 | 354 | 176 | 3 | 18 | 370 | 14 | 362 | 1.65e-111 | 333 |
| Msa1382690 | MtrunA17_Chr1g0146331 | 45.697 | 337 | 179 | 2 | 27 | 361 | 14 | 348 | 3.85e-110 | 330 |
| Msa1382690 | MtrunA17_Chr1g0146391 | 46.903 | 339 | 171 | 3 | 27 | 361 | 6 | 339 | 1.55e-109 | 328 |
| Msa1382690 | MtrunA17_Chr3g0130671 | 64.935 | 231 | 81 | 0 | 16 | 246 | 22 | 252 | 2.19e-109 | 322 |
| Msa1382690 | MtrunA17_Chr2g0293331 | 45.376 | 346 | 185 | 3 | 21 | 365 | 1 | 343 | 2.62e-108 | 325 |
| Msa1382690 | MtrunA17_Chr5g0447231 | 47.278 | 349 | 175 | 5 | 33 | 374 | 25 | 371 | 2.37e-101 | 307 |
| Msa1382690 | MtrunA17_Chr1g0206851 | 47.893 | 261 | 125 | 4 | 114 | 369 | 19 | 273 | 4.33e-81 | 253 |
| Msa1382690 | MtrunA17_Chr3g0103251 | 44.531 | 256 | 108 | 3 | 147 | 370 | 21 | 274 | 4.81e-72 | 229 |
| Msa1382690 | MtrunA17_Chr1g0206831 | 48.908 | 229 | 106 | 3 | 147 | 370 | 15 | 237 | 1.74e-70 | 224 |
| Msa1382690 | MtrunA17_Chr5g0422741 | 33.616 | 354 | 187 | 13 | 20 | 357 | 15 | 336 | 4.63e-43 | 155 |
| Msa1382690 | MtrunA17_Chr1g0198531 | 30.946 | 349 | 218 | 8 | 13 | 356 | 3 | 333 | 4.17e-40 | 147 |
| Msa1382690 | MtrunA17_Chr3g0103261 | 49.600 | 125 | 63 | 0 | 26 | 150 | 16 | 140 | 7.32e-38 | 134 |
| Msa1382690 | MtrunA17_Chr1g0198541 | 29.738 | 343 | 197 | 8 | 29 | 356 | 20 | 333 | 2.99e-37 | 139 |
| Msa1382690 | MtrunA17_Chr7g0230011 | 29.769 | 346 | 220 | 8 | 17 | 356 | 11 | 339 | 4.12e-37 | 139 |
| Msa1382690 | MtrunA17_Chr2g0331721 | 29.235 | 366 | 220 | 9 | 4 | 356 | 18 | 357 | 5.34e-37 | 139 |
| Msa1382690 | MtrunA17_Chr1g0206841 | 61.458 | 96 | 37 | 0 | 20 | 115 | 8 | 103 | 1.28e-36 | 128 |
| Msa1382690 | MtrunA17_Chr6g0458931 | 30.746 | 335 | 196 | 8 | 33 | 356 | 42 | 351 | 3.91e-36 | 136 |
| Msa1382690 | MtrunA17_Chr4g0057851 | 29.641 | 334 | 199 | 8 | 34 | 356 | 11 | 319 | 7.66e-35 | 132 |
| Msa1382690 | MtrunA17_Chr6g0458921 | 29.240 | 342 | 204 | 9 | 34 | 365 | 15 | 328 | 1.63e-34 | 132 |
| Msa1382690 | MtrunA17_Chr1g0206861 | 52.500 | 120 | 56 | 1 | 20 | 138 | 8 | 127 | 2.40e-34 | 124 |
| Msa1382690 | MtrunA17_Chr6g0459031 | 29.885 | 348 | 211 | 11 | 27 | 365 | 5 | 328 | 2.42e-34 | 131 |
| Msa1382690 | MtrunA17_Chr3g0077651 | 31.307 | 329 | 204 | 8 | 34 | 356 | 53 | 365 | 1.51e-32 | 127 |
| Msa1382690 | MtrunA17_Chr3g0122921 | 27.095 | 358 | 236 | 9 | 4 | 356 | 5 | 342 | 7.36e-32 | 124 |
| Msa1382690 | MtrunA17_Chr6g0459021 | 27.222 | 360 | 234 | 11 | 5 | 356 | 4 | 343 | 2.43e-31 | 123 |
| Msa1382690 | MtrunA17_Chr1g0146351 | 56.000 | 100 | 43 | 1 | 43 | 142 | 13 | 111 | 4.74e-31 | 114 |
| Msa1382690 | MtrunA17_Chr6g0459001 | 29.808 | 312 | 197 | 8 | 33 | 340 | 22 | 315 | 4.99e-31 | 123 |
| Msa1382690 | MtrunA17_Chr2g0328081 | 29.341 | 334 | 207 | 9 | 27 | 351 | 5 | 318 | 9.82e-31 | 121 |
| Msa1382690 | MtrunA17_Chr8g0376991 | 27.811 | 338 | 215 | 9 | 28 | 356 | 15 | 332 | 1.03e-30 | 121 |
| Msa1382690 | MtrunA17_Chr6g0459011 | 29.936 | 314 | 194 | 9 | 49 | 356 | 1 | 294 | 9.63e-28 | 112 |
| Msa1382690 | MtrunA17_Chr3g0130661 | 65.753 | 73 | 25 | 0 | 297 | 369 | 1 | 73 | 2.23e-27 | 106 |
| Msa1382690 | MtrunA17_Chr1g0184721 | 26.606 | 327 | 215 | 10 | 27 | 350 | 16 | 320 | 3.79e-26 | 108 |
| Msa1382690 | MtrunA17_Chr4g0027241 | 26.230 | 366 | 220 | 14 | 27 | 367 | 25 | 365 | 4.41e-25 | 105 |
| Msa1382690 | MtrunA17_Chr1g0198081 | 28.076 | 317 | 198 | 13 | 44 | 350 | 70 | 366 | 1.97e-23 | 101 |
| Msa1382690 | MtrunA17_Chr4g0038711 | 25.668 | 374 | 243 | 13 | 11 | 360 | 45 | 407 | 3.27e-22 | 97.8 |
| Msa1382690 | MtrunA17_Chr8g0387941 | 24.419 | 344 | 230 | 11 | 23 | 354 | 14 | 339 | 4.32e-18 | 85.5 |
| Msa1382690 | MtrunA17_Chr3g0143701 | 24.090 | 357 | 221 | 11 | 27 | 357 | 75 | 407 | 7.21e-16 | 79.0 |
| Msa1382690 | MtrunA17_Chr1g0159751 | 42.683 | 82 | 40 | 1 | 276 | 357 | 1 | 75 | 1.20e-15 | 71.6 |
| Msa1382690 | MtrunA17_Chr2g0281341 | 25.000 | 364 | 218 | 14 | 19 | 356 | 81 | 415 | 1.97e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382690 | AT5G09220.1 | 66.298 | 362 | 119 | 1 | 13 | 371 | 25 | 386 | 0.0 | 511 |
| Msa1382690 | AT1G77380.1 | 65.922 | 358 | 119 | 1 | 17 | 371 | 13 | 370 | 1.40e-177 | 502 |
| Msa1382690 | AT5G63850.1 | 67.049 | 349 | 112 | 1 | 26 | 371 | 11 | 359 | 2.13e-177 | 501 |
| Msa1382690 | AT1G44100.1 | 58.311 | 367 | 145 | 3 | 12 | 371 | 7 | 372 | 2.51e-161 | 461 |
| Msa1382690 | AT5G49630.1 | 57.714 | 350 | 142 | 4 | 26 | 369 | 25 | 374 | 4.22e-139 | 405 |
| Msa1382690 | AT1G10010.1 | 54.706 | 340 | 153 | 1 | 27 | 365 | 21 | 360 | 6.53e-139 | 404 |
| Msa1382690 | AT1G10010.2 | 54.706 | 340 | 153 | 1 | 27 | 365 | 22 | 361 | 7.86e-139 | 404 |
| Msa1382690 | AT1G58360.1 | 53.258 | 353 | 160 | 3 | 22 | 369 | 24 | 376 | 1.71e-136 | 398 |
| Msa1382690 | AT5G23810.1 | 48.603 | 358 | 173 | 5 | 7 | 361 | 5 | 354 | 4.99e-109 | 327 |
| Msa1382690 | AT5G23810.2 | 48.538 | 342 | 165 | 5 | 7 | 345 | 5 | 338 | 7.81e-103 | 308 |
| Msa1382690 | AT5G23810.4 | 46.586 | 249 | 124 | 4 | 18 | 263 | 14 | 256 | 2.91e-69 | 219 |
| Msa1382690 | AT5G23810.5 | 45.972 | 211 | 105 | 4 | 7 | 214 | 5 | 209 | 1.17e-54 | 180 |
| Msa1382690 | AT5G23810.3 | 45.972 | 211 | 105 | 4 | 7 | 214 | 5 | 209 | 1.17e-54 | 180 |
| Msa1382690 | AT5G40780.1 | 30.887 | 327 | 204 | 8 | 34 | 356 | 34 | 342 | 9.15e-35 | 133 |
| Msa1382690 | AT1G24400.1 | 28.824 | 340 | 209 | 10 | 28 | 356 | 20 | 337 | 9.21e-34 | 130 |
| Msa1382690 | AT1G67640.1 | 29.464 | 336 | 212 | 9 | 28 | 356 | 20 | 337 | 3.77e-33 | 129 |
| Msa1382690 | AT1G48640.1 | 30.337 | 356 | 221 | 10 | 7 | 356 | 15 | 349 | 4.89e-33 | 128 |
| Msa1382690 | AT1G25530.1 | 29.412 | 357 | 209 | 10 | 32 | 375 | 26 | 352 | 1.59e-32 | 127 |
| Msa1382690 | AT1G71680.2 | 28.415 | 366 | 215 | 12 | 7 | 355 | 8 | 343 | 5.12e-31 | 121 |
| Msa1382690 | AT1G61270.1 | 28.488 | 344 | 221 | 10 | 22 | 357 | 19 | 345 | 6.80e-31 | 122 |
| Msa1382690 | AT5G40780.3 | 30.769 | 312 | 194 | 8 | 49 | 356 | 1 | 294 | 1.09e-30 | 121 |
| Msa1382690 | AT5G40780.2 | 30.769 | 312 | 194 | 8 | 49 | 356 | 1 | 294 | 1.09e-30 | 121 |
| Msa1382690 | AT1G71680.1 | 28.415 | 366 | 215 | 12 | 7 | 355 | 8 | 343 | 2.27e-30 | 121 |
| Msa1382690 | AT3G01760.1 | 25.946 | 370 | 218 | 9 | 16 | 357 | 3 | 344 | 3.12e-30 | 120 |
| Msa1382690 | AT1G08230.2 | 28.173 | 323 | 204 | 11 | 33 | 345 | 27 | 331 | 7.32e-18 | 85.1 |
| Msa1382690 | AT1G47670.1 | 25.352 | 355 | 228 | 11 | 19 | 356 | 79 | 413 | 4.14e-15 | 77.0 |
| Msa1382690 | AT4G35180.1 | 25.357 | 280 | 189 | 5 | 34 | 309 | 58 | 321 | 2.25e-14 | 74.7 |
| Msa1382690 | AT4G35180.2 | 25.362 | 276 | 186 | 5 | 34 | 305 | 58 | 317 | 8.37e-14 | 72.4 |
| Msa1382690 | AT5G41800.1 | 24.850 | 334 | 218 | 10 | 33 | 354 | 26 | 338 | 1.02e-12 | 69.7 |
| Msa1382690 | AT2G36590.2 | 24.332 | 337 | 224 | 12 | 9 | 340 | 2 | 312 | 3.36e-12 | 67.4 |
| Msa1382690 | AT2G39890.2 | 23.448 | 290 | 195 | 10 | 64 | 350 | 63 | 328 | 8.32e-12 | 66.6 |
| Msa1382690 | AT2G39890.1 | 23.448 | 290 | 195 | 10 | 64 | 350 | 63 | 328 | 8.32e-12 | 66.6 |
| Msa1382690 | AT2G39890.3 | 23.448 | 290 | 195 | 10 | 64 | 350 | 4 | 269 | 1.27e-11 | 65.9 |
Find 89 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCAGTACTTGTATCTTTA+TGG | 0.129160 | tig0020524:+2471 | Msa1382690:CDS |
| TCAAATTCTCATTGAAATTC+AGG | 0.231508 | tig0020524:+3697 | Msa1382690:CDS |
| CCATCGTCGTCGAAGTATTC+AGG | 0.273974 | tig0020524:-1603 | None:intergenic |
| TCCAGCTTGGCTCATCGATT+TGG | 0.332874 | tig0020524:+3981 | Msa1382690:CDS |
| TATCTTTATGGCAGTGCAAT+AGG | 0.337033 | tig0020524:+2483 | Msa1382690:CDS |
| ATAGCTGCAATAATGTCTTT+TGG | 0.346313 | tig0020524:+3210 | Msa1382690:CDS |
| AGCATGGGCTACGGCACAAT+TGG | 0.349061 | tig0020524:+1983 | Msa1382690:CDS |
| TCTAGATGTCTCCATTTATC+AGG | 0.357700 | tig0020524:+3075 | Msa1382690:CDS |
| AACGACGATAACCTGCTGTT+TGG | 0.358251 | tig0020524:-3266 | None:intergenic |
| AACCCATACATGATCAGTTT+TGG | 0.359942 | tig0020524:+3126 | Msa1382690:CDS |
| ATCAACTCACATCATGCTAA+TGG | 0.372993 | tig0020524:-2523 | None:intergenic |
| TTCTGAAGGGACACCATCTA+TGG | 0.373125 | tig0020524:-1574 | None:intergenic |
| TAATGTGTACCTGTTCGTTT+AGG | 0.376426 | tig0020524:-1630 | None:intergenic |
| TAGATTGTAAGGACGAAAAC+CGG | 0.376464 | tig0020524:-4132 | None:intergenic |
| TGCATGGGCTATGCTGCATT+TGG | 0.377828 | tig0020524:+3913 | Msa1382690:CDS |
| CTAAATAGATTTAGATTGTA+AGG | 0.384304 | tig0020524:-4143 | None:intergenic |
| GATGCAGTTCGTAGCATTCT+TGG | 0.385053 | tig0020524:+2131 | Msa1382690:CDS |
| CATATAATAACAGCTGTGAT+TGG | 0.385307 | tig0020524:+1942 | Msa1382690:CDS |
| GGGTTGGATTGGTGGTCCTT+TGG | 0.399149 | tig0020524:+2004 | Msa1382690:CDS |
| ATAACAGCTGTGATTGGGTC+TGG | 0.401374 | tig0020524:+1948 | Msa1382690:CDS |
| GTTATGAGTCAGGAACAATA+TGG | 0.405471 | tig0020524:+1907 | Msa1382690:intron |
| ACTCCAAAACTGATCATGTA+TGG | 0.410066 | tig0020524:-3129 | None:intergenic |
| ACGACGATAACCTGCTGTTT+GGG | 0.418197 | tig0020524:-3265 | None:intergenic |
| ACAAAGTGACGAGGCTGAAA+AGG | 0.428865 | tig0020524:-2034 | None:intergenic |
| TTATTTGCTTTGTGGCTGCA+TGG | 0.440989 | tig0020524:+3897 | Msa1382690:CDS |
| ACCTTCAAGGGTACTCTCAC+TGG | 0.442148 | tig0020524:+3587 | Msa1382690:CDS |
| AACAGAAAATGGTACCTTCA+AGG | 0.444400 | tig0020524:+3574 | Msa1382690:intron |
| AACCGGAGCCATTCCATAGA+TGG | 0.448209 | tig0020524:+1561 | Msa1382690:CDS |
| CTGGGGTGCTATCCTTAGCA+TGG | 0.450709 | tig0020524:+1967 | Msa1382690:CDS |
| GTCTTTGCCTTCGTAGAGAA+AGG | 0.451734 | tig0020524:+4060 | Msa1382690:CDS |
| TCAACTCACATCATGCTAAT+GGG | 0.455025 | tig0020524:-2522 | None:intergenic |
| AAGAAGAAATAGAAAGAAAC+CGG | 0.458125 | tig0020524:+1544 | Msa1382690:CDS |
| CTATTCCACAAACCGTGTAT+TGG | 0.465036 | tig0020524:-2449 | None:intergenic |
| GCATGGGCTACGGCACAATT+GGG | 0.465627 | tig0020524:+1984 | Msa1382690:CDS |
| TCCAGTGAGAGTACCCTTGA+AGG | 0.465923 | tig0020524:-3588 | None:intergenic |
| GCACAATTGGGTTGGATTGG+TGG | 0.466018 | tig0020524:+1996 | Msa1382690:CDS |
| GTCAACAACAACAAAATTGT+GGG | 0.475137 | tig0020524:+3628 | Msa1382690:CDS |
| GCCAAATCGATGAGCCAAGC+TGG | 0.477067 | tig0020524:-3982 | None:intergenic |
| GGGCGCCAATACACGGTTTG+TGG | 0.479067 | tig0020524:+2444 | Msa1382690:CDS |
| TATTTGCTTTGTGGCTGCAT+GGG | 0.481138 | tig0020524:+3898 | Msa1382690:CDS |
| TAGCTTCTCTTTCCATGCAC+AGG | 0.488301 | tig0020524:-2098 | None:intergenic |
| ATATAATAACAGCTGTGATT+GGG | 0.488499 | tig0020524:+1943 | Msa1382690:CDS |
| GGGCTACGGCACAATTGGGT+TGG | 0.489975 | tig0020524:+1988 | Msa1382690:CDS |
| TGCTGCTCCTTTCTCTACGA+AGG | 0.498588 | tig0020524:-4067 | None:intergenic |
| GTAAGGACGAAAACCGGGAT+TGG | 0.499818 | tig0020524:-4126 | None:intergenic |
| GCCGTCGTAATCCACCTTGT+GGG | 0.501113 | tig0020524:+4012 | Msa1382690:CDS |
| GCACCAGGGAACTTGCTCAC+TGG | 0.503377 | tig0020524:+3943 | Msa1382690:CDS |
| TTCTCTACGAAGGCAAAGAC+AGG | 0.507161 | tig0020524:-4057 | None:intergenic |
| GATGGTCGTCCTAAACGAAC+AGG | 0.514219 | tig0020524:+1621 | Msa1382690:CDS |
| TTAGCAATTTCCCAAACAGC+AGG | 0.515563 | tig0020524:+3255 | Msa1382690:CDS |
| TAACAGCTGTGATTGGGTCT+GGG | 0.516920 | tig0020524:+1949 | Msa1382690:CDS |
| ACAGAAAATGGTACCTTCAA+GGG | 0.518566 | tig0020524:+3575 | Msa1382690:intron |
| TGTCAACAACAACAAAATTG+TGG | 0.522475 | tig0020524:+3627 | Msa1382690:CDS |
| GCATTTGGAGAACAAGCACC+AGG | 0.529176 | tig0020524:+3928 | Msa1382690:CDS |
| CACCATCTATGGAATGGCTC+CGG | 0.534833 | tig0020524:-1563 | None:intergenic |
| GGAACACAAAATTCCAATCC+CGG | 0.546035 | tig0020524:+4113 | Msa1382690:CDS |
| TGCCGTCGTAATCCACCTTG+TGG | 0.547983 | tig0020524:+4011 | Msa1382690:CDS |
| ACGGCACAATTGGGTTGGAT+TGG | 0.551307 | tig0020524:+1993 | Msa1382690:CDS |
| TATTCAGGATCAAGTTCTGA+AGG | 0.553591 | tig0020524:-1588 | None:intergenic |
| AAGATGGCCCCAAACAAAAG+TGG | 0.554048 | tig0020524:+4092 | Msa1382690:CDS |
| AGACAGGTTGAACATATACT+TGG | 0.557340 | tig0020524:-4041 | None:intergenic |
| TGCAGGCGGGCGCCAATACA+CGG | 0.557733 | tig0020524:+2437 | Msa1382690:intron |
| CTCCAAAACTGATCATGTAT+GGG | 0.563692 | tig0020524:-3128 | None:intergenic |
| AATCCAGTGAGCAAGTTCCC+TGG | 0.566335 | tig0020524:-3946 | None:intergenic |
| TGGGGTGCTATCCTTAGCAT+GGG | 0.576138 | tig0020524:+1968 | Msa1382690:CDS |
| AGATTGTAAGGACGAAAACC+GGG | 0.581228 | tig0020524:-4131 | None:intergenic |
| TTAGTATGTACAATCCAGCT+TGG | 0.584076 | tig0020524:+3968 | Msa1382690:CDS |
| AACAGCTGTGATTGGGTCTG+GGG | 0.588270 | tig0020524:+1950 | Msa1382690:CDS |
| AAGGGACACCATCTATGGAA+TGG | 0.597405 | tig0020524:-1569 | None:intergenic |
| CCTGAATACTTCGACGACGA+TGG | 0.603286 | tig0020524:+1603 | Msa1382690:CDS |
| TTGTGCCGTAGCCCATGCTA+AGG | 0.606269 | tig0020524:-1979 | None:intergenic |
| TTGAGAGTATGAATAAGCAA+AGG | 0.634614 | tig0020524:-3678 | None:intergenic |
| AGATGTCTCCATTTATCAGG+AGG | 0.634869 | tig0020524:+3078 | Msa1382690:CDS |
| CTAGCTGAATGTTATCGTTG+TGG | 0.636182 | tig0020524:+2071 | Msa1382690:CDS |
| CGTTGTGGAGATCCTGTGCA+TGG | 0.641437 | tig0020524:+2086 | Msa1382690:CDS |
| TTCCAGAGTTTCATAATACG+TGG | 0.645176 | tig0020524:+3175 | Msa1382690:CDS |
| CACCACGTATTATGAAACTC+TGG | 0.648752 | tig0020524:-3177 | None:intergenic |
| ATTCAGGATCAAGTTCTGAA+GGG | 0.648974 | tig0020524:-1587 | None:intergenic |
| TTCAAGGGTACTCTCACTGG+AGG | 0.649496 | tig0020524:+3590 | Msa1382690:CDS |
| GGGTTGCTTGACATGTGACA+TGG | 0.650556 | tig0020524:-3108 | None:intergenic |
| CTGAAAAGGATCATCACCAA+AGG | 0.653603 | tig0020524:-2020 | None:intergenic |
| TCAACAACAACAAAATTGTG+GGG | 0.655949 | tig0020524:+3629 | Msa1382690:CDS |
| GCTATCCTTAGCATGGGCTA+CGG | 0.662463 | tig0020524:+1974 | Msa1382690:CDS |
| CAGAGTTTCATAATACGTGG+TGG | 0.670066 | tig0020524:+3178 | Msa1382690:CDS |
| CTTGGTATGCTCCCACAAGG+TGG | 0.675365 | tig0020524:-4023 | None:intergenic |
| ATACTTGGTATGCTCCCACA+AGG | 0.692310 | tig0020524:-4026 | None:intergenic |
| ATGAAGTATACAAAGTGACG+AGG | 0.719582 | tig0020524:-2043 | None:intergenic |
| TCCCACAAGGTGGATTACGA+CGG | 0.722373 | tig0020524:-4013 | None:intergenic |
| CATTTGGAGAACAAGCACCA+GGG | 0.723647 | tig0020524:+3929 | Msa1382690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAATTAATT+CGG | + | tig0020524:3517-3536 | Msa1382690:intron | 0.0% |
| !!! | TTTTTTATGTCTAATTTTTA+TGG | + | tig0020524:1838-1857 | Msa1382690:intron | 10.0% |
| !!! | TTTTTATGTCTAATTTTTAT+GGG | + | tig0020524:1839-1858 | Msa1382690:intron | 10.0% |
| !! | AAAAAAAAAAAATTAATTCG+GGG | + | tig0020524:3519-3538 | Msa1382690:intron | 10.0% |
| !!! | TTTTAATTAAGATAAAGAAA+GGG | - | tig0020524:3739-3758 | None:intergenic | 10.0% |
| !!! | ATTTTAATTAAGATAAAGAA+AGG | - | tig0020524:3740-3759 | None:intergenic | 10.0% |
| !!! | TTATATAATTTTACGCTAAA+TGG | + | tig0020524:1663-1682 | Msa1382690:intron | 15.0% |
| !!! | AAAGCATGTATATTTTTTTT+TGG | + | tig0020524:2317-2336 | Msa1382690:intron | 15.0% |
| !! | ATATATTAATTACCATTAGT+GGG | + | tig0020524:2717-2736 | Msa1382690:intron | 15.0% |
| !! | AAAAAAAAAAAAACCATTGA+TGG | + | tig0020524:2897-2916 | Msa1382690:intron | 15.0% |
| !!! | TTGATGAGTTATTTTAATTT+GGG | + | tig0020524:3033-3052 | Msa1382690:intron | 15.0% |
| !!! | TTAAATTTTCATTACTAGGA+GGG | - | tig0020524:1873-1892 | None:intergenic | 20.0% |
| !!! | TGTGTTAAATTTTCATTACT+AGG | - | tig0020524:1877-1896 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTGTTATGAGTC+AGG | + | tig0020524:1897-1916 | Msa1382690:intron | 20.0% |
| !!! | AATGTGTTTGTATTTAAGAT+CGG | + | tig0020524:2250-2269 | Msa1382690:intron | 20.0% |
| !! | ATGCTTGTAAAAGATAATTA+CGG | - | tig0020524:2557-2576 | None:intergenic | 20.0% |
| !! | GATATATTAATTACCATTAG+TGG | + | tig0020524:2716-2735 | Msa1382690:intron | 20.0% |
| !! | ATAAGTATAACCTAAAAAGA+AGG | + | tig0020524:2861-2880 | Msa1382690:intron | 20.0% |
| !! | TCTTACTTCTATTATTGATA+GGG | + | tig0020524:2991-3010 | Msa1382690:intron | 20.0% |
| !!! | GTTGATGAGTTATTTTAATT+TGG | + | tig0020524:3032-3051 | Msa1382690:intron | 20.0% |
| !!! | ACTGATTTTTAAACAGAAAA+TGG | + | tig0020524:3563-3582 | Msa1382690:intron | 20.0% |
| !!! | TATATATTTTTACTACACAC+AGG | + | tig0020524:3795-3814 | Msa1382690:intron | 20.0% |
| !!! | ATTCTTCATCGTTTTTATTT+CGG | - | tig0020524:3842-3861 | None:intergenic | 20.0% |
| ! | AAGAAGAAATAGAAAGAAAC+CGG | + | tig0020524:1544-1563 | Msa1382690:CDS | 25.0% |
| ! | GAATTTCACAAGTTTACATT+TGG | + | tig0020524:1756-1775 | Msa1382690:intron | 25.0% |
| !! | GTTAAATTTTCATTACTAGG+AGG | - | tig0020524:1874-1893 | None:intergenic | 25.0% |
| ! | ATATAATAACAGCTGTGATT+GGG | + | tig0020524:1943-1962 | Msa1382690:CDS | 25.0% |
| ! | GATGTAATATTCTTAAGAGT+TGG | + | tig0020524:2376-2395 | Msa1382690:intron | 25.0% |
| !! | TAGTTTCAAACATAATTTGC+AGG | + | tig0020524:2420-2439 | Msa1382690:intron | 25.0% |
| ! | TGTAAAAGATAATTACGGTA+TGG | - | tig0020524:2552-2571 | None:intergenic | 25.0% |
| !! | CAATATCAATCCTTCTTTTT+AGG | - | tig0020524:2874-2893 | None:intergenic | 25.0% |
| !!! | ACATATTTTTGATCCATCAA+TGG | - | tig0020524:2913-2932 | None:intergenic | 25.0% |
| !! | ACAAATGCTAATAGGTATTT+TGG | - | tig0020524:2972-2991 | None:intergenic | 25.0% |
| ! | GTCTTACTTCTATTATTGAT+AGG | + | tig0020524:2990-3009 | Msa1382690:intron | 25.0% |
| !!! | TTATTTTAATTTGGGTGACA+GGG | + | tig0020524:3041-3060 | Msa1382690:intron | 25.0% |
| ! | ATTCTTGATCATGTACTTTA+CGG | + | tig0020524:3432-3451 | Msa1382690:intron | 25.0% |
| ! | TCAAATTCTCATTGAAATTC+AGG | + | tig0020524:3697-3716 | Msa1382690:CDS | 25.0% |
| CATATAATAACAGCTGTGAT+TGG | + | tig0020524:1942-1961 | Msa1382690:CDS | 30.0% | |
| ! | AAAGAGAAGCTATACTTTTG+TGG | + | tig0020524:2109-2128 | Msa1382690:CDS | 30.0% |
| ! | TTGCTTGTATTTAAGAGCAT+GGG | - | tig0020524:2196-2215 | None:intergenic | 30.0% |
| TTTGCTTGTATTTAAGAGCA+TGG | - | tig0020524:2197-2216 | None:intergenic | 30.0% | |
| ! | TTTCAAACATAATTTGCAGG+CGG | + | tig0020524:2423-2442 | Msa1382690:intron | 30.0% |
| GTTCAGTACTTGTATCTTTA+TGG | + | tig0020524:2471-2490 | Msa1382690:CDS | 30.0% | |
| GAAGTAAGACAAATGCTAAT+AGG | - | tig0020524:2980-2999 | None:intergenic | 30.0% | |
| !!! | GTTATTTTAATTTGGGTGAC+AGG | + | tig0020524:3040-3059 | Msa1382690:intron | 30.0% |
| ! | ATAGCTGCAATAATGTCTTT+TGG | + | tig0020524:3210-3229 | Msa1382690:CDS | 30.0% |
| ATCAAACAATTGTACTCAAG+TGG | + | tig0020524:3357-3376 | Msa1382690:intron | 30.0% | |
| ! | AGAACTTGGTTCTCTAAATT+TGG | - | tig0020524:3396-3415 | None:intergenic | 30.0% |
| TTACATCCAAAAGTAGAACT+TGG | - | tig0020524:3410-3429 | None:intergenic | 30.0% | |
| !!! | TGTTAACAGTCTCGTTTTTT+GGG | - | tig0020524:3491-3510 | None:intergenic | 30.0% |
| TGTCAACAACAACAAAATTG+TGG | + | tig0020524:3627-3646 | Msa1382690:CDS | 30.0% | |
| GTCAACAACAACAAAATTGT+GGG | + | tig0020524:3628-3647 | Msa1382690:CDS | 30.0% | |
| TCAACAACAACAAAATTGTG+GGG | + | tig0020524:3629-3648 | Msa1382690:CDS | 30.0% | |
| ! | TTGAGAGTATGAATAAGCAA+AGG | - | tig0020524:3681-3700 | None:intergenic | 30.0% |
| !! | TTCATCGTTTTTATTTCGGA+TGG | - | tig0020524:3838-3857 | None:intergenic | 30.0% |
| !! | ACAGCATTTTATTTGCTTTG+TGG | + | tig0020524:3889-3908 | Msa1382690:CDS | 30.0% |
| !! | TTTGTGTTCCACTTTTGTTT+GGG | - | tig0020524:4103-4122 | None:intergenic | 30.0% |
| !! | TTTTGTGTTCCACTTTTGTT+TGG | - | tig0020524:4104-4123 | None:intergenic | 30.0% |
| !! | ATTCAGGATCAAGTTCTGAA+GGG | - | tig0020524:1590-1609 | None:intergenic | 35.0% |
| ! | TATTCAGGATCAAGTTCTGA+AGG | - | tig0020524:1591-1610 | None:intergenic | 35.0% |
| TAATGTGTACCTGTTCGTTT+AGG | - | tig0020524:1633-1652 | None:intergenic | 35.0% | |
| GTTATGAGTCAGGAACAATA+TGG | + | tig0020524:1907-1926 | Msa1382690:intron | 35.0% | |
| ATGAAGTATACAAAGTGACG+AGG | - | tig0020524:2046-2065 | None:intergenic | 35.0% | |
| ! | TTCAAACATAATTTGCAGGC+GGG | + | tig0020524:2424-2443 | Msa1382690:intron | 35.0% |
| TATCTTTATGGCAGTGCAAT+AGG | + | tig0020524:2483-2502 | Msa1382690:CDS | 35.0% | |
| TCAACTCACATCATGCTAAT+GGG | - | tig0020524:2525-2544 | None:intergenic | 35.0% | |
| ATCAACTCACATCATGCTAA+TGG | - | tig0020524:2526-2545 | None:intergenic | 35.0% | |
| !! | TTGTTCTAAAGACCCACTAA+TGG | - | tig0020524:2732-2751 | None:intergenic | 35.0% |
| TCTAGATGTCTCCATTTATC+AGG | + | tig0020524:3075-3094 | Msa1382690:CDS | 35.0% | |
| ! | GATCTTTTCCTCCTGATAAA+TGG | - | tig0020524:3089-3108 | None:intergenic | 35.0% |
| ! | AACCCATACATGATCAGTTT+TGG | + | tig0020524:3126-3145 | Msa1382690:CDS | 35.0% |
| CTCCAAAACTGATCATGTAT+GGG | - | tig0020524:3131-3150 | None:intergenic | 35.0% | |
| ACTCCAAAACTGATCATGTA+TGG | - | tig0020524:3132-3151 | None:intergenic | 35.0% | |
| TTCCAGAGTTTCATAATACG+TGG | + | tig0020524:3175-3194 | Msa1382690:CDS | 35.0% | |
| ! | AGAGAACCAAGTTCTACTTT+TGG | + | tig0020524:3401-3420 | Msa1382690:intron | 35.0% |
| !!! | GTTAACAGTCTCGTTTTTTG+GGG | - | tig0020524:3490-3509 | None:intergenic | 35.0% |
| !!! | GTGTTAACAGTCTCGTTTTT+TGG | - | tig0020524:3492-3511 | None:intergenic | 35.0% |
| AACAGAAAATGGTACCTTCA+AGG | + | tig0020524:3574-3593 | Msa1382690:intron | 35.0% | |
| ACAGAAAATGGTACCTTCAA+GGG | + | tig0020524:3575-3594 | Msa1382690:intron | 35.0% | |
| !! | ATCGTTTTTATTTCGGATGG+TGG | - | tig0020524:3835-3854 | None:intergenic | 35.0% |
| TTAGTATGTACAATCCAGCT+TGG | + | tig0020524:3968-3987 | Msa1382690:CDS | 35.0% | |
| ! | AGACAGGTTGAACATATACT+TGG | - | tig0020524:4044-4063 | None:intergenic | 35.0% |
| !! | TTGTGTTCCACTTTTGTTTG+GGG | - | tig0020524:4102-4121 | None:intergenic | 35.0% |
| TAGATTGTAAGGACGAAAAC+CGG | - | tig0020524:4135-4154 | None:intergenic | 35.0% | |
| !! | GTGTCGATCTTTTGTCTTCT+TGG | + | tig0020524:1778-1797 | Msa1382690:intron | 40.0% |
| CTGAAAAGGATCATCACCAA+AGG | - | tig0020524:2023-2042 | None:intergenic | 40.0% | |
| CTAGCTGAATGTTATCGTTG+TGG | + | tig0020524:2071-2090 | Msa1382690:CDS | 40.0% | |
| CTATTCCACAAACCGTGTAT+TGG | - | tig0020524:2452-2471 | None:intergenic | 40.0% | |
| AGATGTCTCCATTTATCAGG+AGG | + | tig0020524:3078-3097 | Msa1382690:CDS | 40.0% | |
| CACCACGTATTATGAAACTC+TGG | - | tig0020524:3180-3199 | None:intergenic | 40.0% | |
| CAGAGTTTCATAATACGTGG+TGG | + | tig0020524:3178-3197 | Msa1382690:CDS | 40.0% | |
| !! | TCTTTTGGCTATTCCACAGT+TGG | + | tig0020524:3225-3244 | Msa1382690:CDS | 40.0% |
| TTAGCAATTTCCCAAACAGC+AGG | + | tig0020524:3255-3274 | Msa1382690:CDS | 40.0% | |
| !!! | TGGGGAATTTTTCAAGCTCT+TGG | + | tig0020524:3647-3666 | Msa1382690:CDS | 40.0% |
| TTATTTGCTTTGTGGCTGCA+TGG | + | tig0020524:3897-3916 | Msa1382690:CDS | 40.0% | |
| TATTTGCTTTGTGGCTGCAT+GGG | + | tig0020524:3898-3917 | Msa1382690:CDS | 40.0% | |
| AGAAAGGAGCAGCAAAAAGA+TGG | + | tig0020524:4076-4095 | Msa1382690:CDS | 40.0% | |
| GGAACACAAAATTCCAATCC+CGG | + | tig0020524:4113-4132 | Msa1382690:CDS | 40.0% | |
| AGATTGTAAGGACGAAAACC+GGG | - | tig0020524:4134-4153 | None:intergenic | 40.0% | |
| AAGGGACACCATCTATGGAA+TGG | - | tig0020524:1572-1591 | None:intergenic | 45.0% | |
| ! | TTCTGAAGGGACACCATCTA+TGG | - | tig0020524:1577-1596 | None:intergenic | 45.0% |
| ATAACAGCTGTGATTGGGTC+TGG | + | tig0020524:1948-1967 | Msa1382690:CDS | 45.0% | |
| TAACAGCTGTGATTGGGTCT+GGG | + | tig0020524:1949-1968 | Msa1382690:CDS | 45.0% | |
| ACAAAGTGACGAGGCTGAAA+AGG | - | tig0020524:2037-2056 | None:intergenic | 45.0% | |
| TAGCTTCTCTTTCCATGCAC+AGG | - | tig0020524:2101-2120 | None:intergenic | 45.0% | |
| GATGCAGTTCGTAGCATTCT+TGG | + | tig0020524:2131-2150 | Msa1382690:CDS | 45.0% | |
| TGCTAAAAAGACGCCAACTG+TGG | - | tig0020524:3241-3260 | None:intergenic | 45.0% | |
| ! | ACGACGATAACCTGCTGTTT+GGG | - | tig0020524:3268-3287 | None:intergenic | 45.0% |
| AACGACGATAACCTGCTGTT+TGG | - | tig0020524:3269-3288 | None:intergenic | 45.0% | |
| !!! | CAGTCTCGTTTTTTGGGGAA+AGG | - | tig0020524:3485-3504 | None:intergenic | 45.0% |
| CATTTGGAGAACAAGCACCA+GGG | + | tig0020524:3929-3948 | Msa1382690:CDS | 45.0% | |
| ATACTTGGTATGCTCCCACA+AGG | - | tig0020524:4029-4048 | None:intergenic | 45.0% | |
| TTCTCTACGAAGGCAAAGAC+AGG | - | tig0020524:4060-4079 | None:intergenic | 45.0% | |
| GTCTTTGCCTTCGTAGAGAA+AGG | + | tig0020524:4060-4079 | Msa1382690:CDS | 45.0% | |
| AAGATGGCCCCAAACAAAAG+TGG | + | tig0020524:4092-4111 | Msa1382690:CDS | 45.0% | |
| !! | AAAAAAAAAAAAATTAATTC+GGG | + | tig0020524:3518-3537 | Msa1382690:intron | 5.0% |
| AACCGGAGCCATTCCATAGA+TGG | + | tig0020524:1561-1580 | Msa1382690:CDS | 50.0% | |
| CACCATCTATGGAATGGCTC+CGG | - | tig0020524:1566-1585 | None:intergenic | 50.0% | |
| ! | CCATCGTCGTCGAAGTATTC+AGG | - | tig0020524:1606-1625 | None:intergenic | 50.0% |
| CCTGAATACTTCGACGACGA+TGG | + | tig0020524:1603-1622 | Msa1382690:CDS | 50.0% | |
| GATGGTCGTCCTAAACGAAC+AGG | + | tig0020524:1621-1640 | Msa1382690:CDS | 50.0% | |
| AACAGCTGTGATTGGGTCTG+GGG | + | tig0020524:1950-1969 | Msa1382690:CDS | 50.0% | |
| ! | TGGGGTGCTATCCTTAGCAT+GGG | + | tig0020524:1968-1987 | Msa1382690:CDS | 50.0% |
| ! | GCTATCCTTAGCATGGGCTA+CGG | + | tig0020524:1974-1993 | Msa1382690:CDS | 50.0% |
| !! | ACGGCACAATTGGGTTGGAT+TGG | + | tig0020524:1993-2012 | Msa1382690:CDS | 50.0% |
| !! | GCACAATTGGGTTGGATTGG+TGG | + | tig0020524:1996-2015 | Msa1382690:CDS | 50.0% |
| GGGTTGCTTGACATGTGACA+TGG | - | tig0020524:3111-3130 | None:intergenic | 50.0% | |
| ACGGTAACTCGAACGAACTC+AGG | + | tig0020524:3451-3470 | Msa1382690:intron | 50.0% | |
| !! | ACCTTCAAGGGTACTCTCAC+TGG | + | tig0020524:3587-3606 | Msa1382690:CDS | 50.0% |
| !! | TCCAGTGAGAGTACCCTTGA+AGG | - | tig0020524:3591-3610 | None:intergenic | 50.0% |
| !! | TTCAAGGGTACTCTCACTGG+AGG | + | tig0020524:3590-3609 | Msa1382690:CDS | 50.0% |
| ! | TGCATGGGCTATGCTGCATT+TGG | + | tig0020524:3913-3932 | Msa1382690:CDS | 50.0% |
| GCATTTGGAGAACAAGCACC+AGG | + | tig0020524:3928-3947 | Msa1382690:CDS | 50.0% | |
| AATCCAGTGAGCAAGTTCCC+TGG | - | tig0020524:3949-3968 | None:intergenic | 50.0% | |
| ! | TCCAGCTTGGCTCATCGATT+TGG | + | tig0020524:3981-4000 | Msa1382690:CDS | 50.0% |
| !! | TCCCACAAGGTGGATTACGA+CGG | - | tig0020524:4016-4035 | None:intergenic | 50.0% |
| TGCTGCTCCTTTCTCTACGA+AGG | - | tig0020524:4070-4089 | None:intergenic | 50.0% | |
| GTAAGGACGAAAACCGGGAT+TGG | - | tig0020524:4129-4148 | None:intergenic | 50.0% | |
| ! | CTGGGGTGCTATCCTTAGCA+TGG | + | tig0020524:1967-1986 | Msa1382690:CDS | 55.0% |
| TTGTGCCGTAGCCCATGCTA+AGG | - | tig0020524:1982-2001 | None:intergenic | 55.0% | |
| ! | AGCATGGGCTACGGCACAAT+TGG | + | tig0020524:1983-2002 | Msa1382690:CDS | 55.0% |
| ! | GCATGGGCTACGGCACAATT+GGG | + | tig0020524:1984-2003 | Msa1382690:CDS | 55.0% |
| !! | GGGTTGGATTGGTGGTCCTT+TGG | + | tig0020524:2004-2023 | Msa1382690:CDS | 55.0% |
| CGTTGTGGAGATCCTGTGCA+TGG | + | tig0020524:2086-2105 | Msa1382690:CDS | 55.0% | |
| GCCAAATCGATGAGCCAAGC+TGG | - | tig0020524:3985-4004 | None:intergenic | 55.0% | |
| TGCCGTCGTAATCCACCTTG+TGG | + | tig0020524:4011-4030 | Msa1382690:CDS | 55.0% | |
| GCCGTCGTAATCCACCTTGT+GGG | + | tig0020524:4012-4031 | Msa1382690:CDS | 55.0% | |
| CTTGGTATGCTCCCACAAGG+TGG | - | tig0020524:4026-4045 | None:intergenic | 55.0% | |
| GGGCTACGGCACAATTGGGT+TGG | + | tig0020524:1988-2007 | Msa1382690:CDS | 60.0% | |
| GGGCGCCAATACACGGTTTG+TGG | + | tig0020524:2444-2463 | Msa1382690:CDS | 60.0% | |
| ! | GCACCAGGGAACTTGCTCAC+TGG | + | tig0020524:3943-3962 | Msa1382690:CDS | 60.0% |
| TGCAGGCGGGCGCCAATACA+CGG | + | tig0020524:2437-2456 | Msa1382690:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020524 | gene | 1537 | 4155 | 1537 | ID=Msa1382690;Name=Msa1382690 |
| tig0020524 | mRNA | 1537 | 4155 | 1537 | ID=Msa1382690-mRNA-1;Parent=Msa1382690;Name=Msa1382690-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|1|1|1|6|0|375 |
| tig0020524 | exon | 1537 | 1642 | 1537 | ID=Msa1382690-mRNA-1:exon:8297;Parent=Msa1382690-mRNA-1 |
| tig0020524 | exon | 1919 | 2152 | 1919 | ID=Msa1382690-mRNA-1:exon:8298;Parent=Msa1382690-mRNA-1 |
| tig0020524 | exon | 2442 | 2535 | 2442 | ID=Msa1382690-mRNA-1:exon:8299;Parent=Msa1382690-mRNA-1 |
| tig0020524 | exon | 3062 | 3276 | 3062 | ID=Msa1382690-mRNA-1:exon:8300;Parent=Msa1382690-mRNA-1 |
| tig0020524 | exon | 3579 | 3718 | 3579 | ID=Msa1382690-mRNA-1:exon:8301;Parent=Msa1382690-mRNA-1 |
| tig0020524 | exon | 3817 | 4155 | 3817 | ID=Msa1382690-mRNA-1:exon:8302;Parent=Msa1382690-mRNA-1 |
| tig0020524 | CDS | 1537 | 1642 | 1537 | ID=Msa1382690-mRNA-1:cds;Parent=Msa1382690-mRNA-1 |
| tig0020524 | CDS | 1919 | 2152 | 1919 | ID=Msa1382690-mRNA-1:cds;Parent=Msa1382690-mRNA-1 |
| tig0020524 | CDS | 2442 | 2535 | 2442 | ID=Msa1382690-mRNA-1:cds;Parent=Msa1382690-mRNA-1 |
| tig0020524 | CDS | 3062 | 3276 | 3062 | ID=Msa1382690-mRNA-1:cds;Parent=Msa1382690-mRNA-1 |
| tig0020524 | CDS | 3579 | 3718 | 3579 | ID=Msa1382690-mRNA-1:cds;Parent=Msa1382690-mRNA-1 |
| tig0020524 | CDS | 3817 | 4155 | 3817 | ID=Msa1382690-mRNA-1:cds;Parent=Msa1382690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
