AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0395110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0395110 MtrunA17_Chr3g0080721 54.153 301 61 4 104 327 359 659 6.99e-90 284
Msa0395110 MtrunA17_Chr3g0080721 38.376 271 96 8 2 213 118 376 6.35e-35 135
Msa0395110 MtrunA17_Chr3g0080741 51.163 301 70 3 104 327 625 925 6.04e-84 274
Msa0395110 MtrunA17_Chr3g0080741 54.110 146 32 2 2 113 382 526 9.25e-37 141
Msa0395110 MtrunA17_Chr3g0080651 51.163 301 69 5 104 327 539 838 1.02e-78 258
Msa0395110 MtrunA17_Chr3g0080651 38.745 271 95 8 2 213 298 556 1.81e-36 140
Msa0395110 MtrunA17_Chr3g0080631 47.841 301 80 3 104 327 578 878 4.16e-77 254
Msa0395110 MtrunA17_Chr3g0080631 61.607 112 31 2 2 113 380 479 8.58e-34 132
Msa0395110 MtrunA17_Chr3g0080751 46.178 314 85 6 93 329 618 924 3.80e-71 239
Msa0395110 MtrunA17_Chr3g0080751 51.370 146 37 1 2 113 380 525 9.40e-34 132
Msa0395110 MtrunA17_Chr3g0094301 67.241 174 40 1 104 260 623 796 7.70e-70 235
Msa0395110 MtrunA17_Chr3g0094301 39.852 271 94 8 2 213 380 640 4.83e-39 148
Msa0395110 MtrunA17_Chr3g0094301 73.529 68 18 0 260 327 856 923 3.03e-26 110
Msa0395110 MtrunA17_Chr7g0229761 67.241 174 40 1 104 260 623 796 7.70e-70 235
Msa0395110 MtrunA17_Chr7g0229761 39.852 271 94 8 2 213 380 640 4.83e-39 148
Msa0395110 MtrunA17_Chr7g0229761 73.529 68 18 0 260 327 856 923 3.03e-26 110
Msa0395110 MtrunA17_Chr3g0080731 69.540 174 36 1 104 260 623 796 1.80e-69 234
Msa0395110 MtrunA17_Chr3g0080731 40.860 279 96 7 2 221 380 648 1.65e-42 158
Msa0395110 MtrunA17_Chr3g0080731 79.412 68 14 0 260 327 856 923 2.36e-29 119
Msa0395110 MtrunA17_Chr3g0080601 61.622 185 48 2 104 271 622 800 7.22e-68 230
Msa0395110 MtrunA17_Chr3g0080601 40.076 262 106 5 2 213 379 639 4.41e-39 148
Msa0395110 MtrunA17_Chr3g0080601 55.882 68 30 0 260 327 855 922 3.41e-17 83.6
Msa0395110 MtrunA17_Chr3g0080771 61.494 174 50 1 104 260 622 795 9.72e-63 216
Msa0395110 MtrunA17_Chr3g0080771 45.146 206 77 3 2 173 380 583 1.21e-39 150
Msa0395110 MtrunA17_Chr3g0080771 59.375 64 26 0 260 323 855 918 2.29e-16 80.9
Msa0395110 MtrunA17_Chr3g0080791 61.494 174 50 1 104 260 622 795 1.04e-62 216
Msa0395110 MtrunA17_Chr3g0080791 39.259 270 112 5 2 221 380 647 9.84e-41 153
Msa0395110 MtrunA17_Chr3g0080791 56.716 67 29 0 260 326 855 921 6.14e-16 79.7
Msa0395110 MtrunA17_Chr1g0160871 62.581 155 37 2 119 256 1 151 5.16e-59 188
Msa0395110 MtrunA17_Chr3g0081211 36.164 365 135 8 47 327 572 922 8.05e-53 188
Msa0395110 MtrunA17_Chr3g0081211 45.070 142 43 2 3 110 379 519 4.00e-26 110
Msa0395110 MtrunA17_Chr3g0081391 39.000 300 105 4 106 327 624 923 1.48e-52 187
Msa0395110 MtrunA17_Chr3g0081391 49.655 145 38 2 3 113 380 523 2.58e-30 122
Msa0395110 MtrunA17_Chr3g0081341 37.542 301 110 4 105 327 687 987 9.90e-52 185
Msa0395110 MtrunA17_Chr3g0081341 47.917 144 40 2 3 112 444 586 2.16e-29 120
Msa0395110 MtrunA17_Chr3g0081191 36.667 300 112 4 106 327 620 919 5.46e-50 180
Msa0395110 MtrunA17_Chr3g0081191 45.517 145 44 2 3 113 376 519 3.47e-28 116
Msa0395110 MtrunA17_Chr3g0081361 38.411 302 107 7 105 327 628 929 1.01e-48 176
Msa0395110 MtrunA17_Chr3g0081361 46.207 145 43 2 3 113 385 528 6.73e-30 121
Msa0395110 MtrunA17_Chr3g0081371 36.304 303 113 5 105 327 627 929 2.65e-48 175
Msa0395110 MtrunA17_Chr3g0081371 49.315 146 39 2 2 113 384 528 1.42e-30 123
Msa0395110 MtrunA17_Chr3g0081181 36.545 301 113 5 105 327 607 907 1.35e-43 161
Msa0395110 MtrunA17_Chr3g0081181 48.872 133 34 3 3 102 365 496 4.46e-25 107
Msa0395110 MtrunA17_Chr1g0149071 34.091 352 172 10 3 299 97 443 3.81e-39 145
Msa0395110 MtrunA17_Chr1g0151481 32.000 300 125 5 104 327 627 923 1.75e-37 144
Msa0395110 MtrunA17_Chr1g0151481 45.395 152 48 2 3 120 382 532 2.95e-29 119
Msa0395110 MtrunA17_Chr3g0084351 53.425 146 33 2 2 113 305 449 3.99e-36 138
Msa0395110 MtrunA17_Chr3g0081841 36.059 269 129 5 52 279 212 478 1.70e-35 135
Msa0395110 MtrunA17_Chr3g0084361 53.509 114 36 1 164 260 1 114 1.83e-35 130
Msa0395110 MtrunA17_Chr3g0084361 56.522 69 30 0 258 326 172 240 1.64e-15 75.9
Msa0395110 MtrunA17_Chr3g0101011 34.459 296 110 9 106 323 640 929 6.04e-33 130
Msa0395110 MtrunA17_Chr3g0101011 37.241 145 56 2 3 113 393 536 3.37e-20 92.4
Msa0395110 MtrunA17_Chr5g0410021 29.043 303 137 6 104 329 607 908 1.37e-32 129
Msa0395110 MtrunA17_Chr5g0410021 37.410 139 51 4 3 106 361 498 1.45e-16 81.6
Msa0395110 MtrunA17_Chr5g0409991 36.364 198 105 4 104 282 605 800 5.72e-30 121
Msa0395110 MtrunA17_Chr5g0409991 27.941 272 127 11 3 213 359 622 3.15e-15 77.4
Msa0395110 MtrunA17_Chr5g0409971 34.848 198 108 4 104 282 610 805 2.03e-28 117
Msa0395110 MtrunA17_Chr5g0409971 29.907 214 103 8 3 178 364 568 3.83e-14 73.9
Msa0395110 MtrunA17_Chr3g0081201 36.232 207 71 5 182 327 2 208 4.60e-28 109
Msa0395110 MtrunA17_Chr5g0410031 39.286 196 97 6 104 279 609 802 3.46e-27 113
Msa0395110 MtrunA17_Chr5g0410031 29.151 271 141 8 3 227 365 630 7.51e-17 82.4
Msa0395110 MtrunA17_Chr3g0112511 37.209 215 100 6 106 299 614 814 4.71e-26 110
Msa0395110 MtrunA17_Chr3g0112511 44.521 146 46 2 3 114 370 514 2.53e-25 107
Msa0395110 MtrunA17_Chr3g0101391 34.457 267 124 12 80 313 291 539 7.41e-26 108
Msa0395110 MtrunA17_Chr3g0101391 44.776 134 39 2 3 102 61 193 2.57e-23 101
Msa0395110 MtrunA17_Chr5g0410001 28.387 310 142 7 104 334 607 915 1.66e-25 108
Msa0395110 MtrunA17_Chr5g0410001 33.813 139 56 3 3 106 364 501 4.33e-15 77.0
Msa0395110 MtrunA17_Chr3g0100801 48.413 126 38 2 3 102 343 467 2.33e-25 107
Msa0395110 MtrunA17_Chr3g0100801 39.103 156 85 3 106 260 580 726 1.01e-20 94.0
Msa0395110 MtrunA17_Chr3g0101331 29.052 327 174 11 68 360 607 909 1.39e-24 105
Msa0395110 MtrunA17_Chr3g0101331 42.553 141 40 3 3 103 381 520 1.17e-22 100
Msa0395110 MtrunA17_Chr3g0100961 42.754 138 44 2 3 106 379 515 1.51e-24 105
Msa0395110 MtrunA17_Chr3g0100961 27.907 301 138 9 104 333 618 910 3.53e-20 92.4
Msa0395110 MtrunA17_Chr3g0100911 35.119 168 77 3 113 260 2 157 1.76e-24 100
Msa0395110 MtrunA17_Chr1g0189281 34.694 245 120 9 106 320 116 350 3.27e-24 102
Msa0395110 MtrunA17_Chr3g0101181 28.488 344 178 10 3 303 387 705 5.98e-24 103
Msa0395110 MtrunA17_Chr3g0101181 29.333 225 116 5 106 299 633 845 1.08e-16 82.0
Msa0395110 MtrunA17_Chr3g0100731 44.030 134 40 2 3 102 134 266 8.21e-24 103
Msa0395110 MtrunA17_Chr3g0100731 36.905 168 87 4 106 260 379 540 1.89e-19 90.1
Msa0395110 MtrunA17_Chr3g0101321 45.185 135 39 2 3 103 371 504 1.37e-23 102
Msa0395110 MtrunA17_Chr3g0101201 40.936 171 85 5 106 260 623 793 2.46e-23 102
Msa0395110 MtrunA17_Chr3g0101201 37.121 132 50 2 3 102 380 510 1.02e-16 82.0
Msa0395110 MtrunA17_Chr3g0101201 26.609 233 141 6 106 325 703 918 6.12e-13 70.5
Msa0395110 MtrunA17_Chr3g0100681 42.754 138 44 2 3 106 192 328 2.55e-23 101
Msa0395110 MtrunA17_Chr3g0100681 34.591 159 74 2 106 246 436 582 3.50e-17 83.2
Msa0395110 MtrunA17_Chr3g0101241 33.663 202 96 4 103 284 594 777 1.03e-22 100
Msa0395110 MtrunA17_Chr3g0101241 26.816 358 169 11 3 308 356 672 3.26e-18 86.7
Msa0395110 MtrunA17_Chr3g0101271 33.663 202 96 4 103 284 594 777 1.05e-22 100
Msa0395110 MtrunA17_Chr3g0101271 26.816 358 169 11 3 308 356 672 3.12e-18 86.7
Msa0395110 MtrunA17_Chr1g0189351 41.791 134 43 2 3 102 376 508 2.78e-22 99.0
Msa0395110 MtrunA17_Chr1g0189351 34.426 244 125 8 105 320 634 870 5.40e-21 95.1
Msa0395110 MtrunA17_Chr3g0101231 38.824 170 89 4 106 260 628 797 4.16e-22 98.2
Msa0395110 MtrunA17_Chr3g0101231 37.500 136 52 2 3 106 386 520 2.84e-18 86.7
Msa0395110 MtrunA17_Chr3g0100851 38.406 138 50 2 3 106 255 391 1.22e-21 96.7
Msa0395110 MtrunA17_Chr3g0100851 34.731 167 91 3 106 260 500 660 2.00e-18 87.0
Msa0395110 MtrunA17_Chr3g0100831 40.580 138 47 2 3 106 374 510 1.77e-21 96.3
Msa0395110 MtrunA17_Chr3g0100831 37.870 169 87 3 104 260 618 780 2.43e-21 95.9
Msa0395110 MtrunA17_Chr3g0100971 39.855 138 48 2 3 106 376 512 4.43e-21 95.1
Msa0395110 MtrunA17_Chr3g0100761 39.130 138 49 2 3 106 336 472 1.73e-20 93.2
Msa0395110 MtrunA17_Chr3g0101211 38.462 143 55 3 3 113 169 310 2.14e-20 91.7
Msa0395110 MtrunA17_Chr3g0101251 40.458 131 46 2 3 102 343 472 2.69e-20 92.8
Msa0395110 MtrunA17_Chr3g0101251 26.518 313 129 9 106 330 586 885 3.48e-14 74.3
Msa0395110 MtrunA17_Chr3g0101171 49.351 77 38 1 37 113 19 94 5.98e-19 81.6
Msa0395110 MtrunA17_Chr3g0101221 32.000 225 96 6 106 301 625 821 1.84e-18 87.4
Msa0395110 MtrunA17_Chr3g0101221 38.636 132 48 3 3 102 382 512 5.58e-18 85.9
Msa0395110 MtrunA17_Chr3g0100791 34.731 167 91 3 106 260 159 319 2.37e-18 86.3
Msa0395110 MtrunA17_Chr3g0101361 30.964 197 82 4 106 260 454 638 3.56e-18 86.3
Msa0395110 MtrunA17_Chr3g0100701 29.452 292 125 11 106 325 451 733 6.77e-18 85.5
Msa0395110 MtrunA17_Chr3g0100701 57.143 63 26 1 44 106 284 345 8.77e-15 75.9
Msa0395110 MtrunA17_Chr5g0444301 51.948 77 36 1 37 113 4 79 8.63e-16 78.6
Msa0395110 MtrunA17_Chr5g0444301 36.598 194 103 7 79 260 162 347 4.19e-13 70.5
Msa0395110 MtrunA17_Chr1g0189331 40.541 111 53 3 156 258 4 109 4.21e-15 70.9
Msa0395110 MtrunA17_Chr4g0037421 35.556 135 53 3 3 104 425 558 6.93e-15 76.3
Msa0395110 MtrunA17_Chr1g0189321 55.224 67 29 1 37 103 41 106 1.47e-14 72.8
Msa0395110 MtrunA17_Chr5g0404741 35.821 134 53 2 3 104 365 497 1.84e-14 75.1
Msa0395110 MtrunA17_Chr2g0299001 25.070 355 176 12 3 306 376 691 9.59e-14 72.8
Msa0395110 MtrunA17_Chr7g0219851 33.099 142 54 4 3 104 364 504 1.57e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0395110 AT3G07040.1 28.191 188 120 3 106 279 619 805 2.06e-14 75.5

Find 83 sgRNAs with CRISPR-Local

Find 433 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTAATCTCTTATGATTAA+TGG 0.158752 3_2:-11234564 None:intergenic
TGTAGCTCACCAACAGATTT+AGG 0.206099 3_2:-11238561 None:intergenic
GAGCTTGAGGGTGCTGTTGT+AGG 0.271283 3_2:+11240035 Msa0395110:CDS
ACACCATGACCAAACTTCTA+TGG 0.272429 3_2:-11234676 None:intergenic
CTCTTCTATTGCAGCACTTA+AGG 0.292248 3_2:-11238883 None:intergenic
CATGTAAGCTTGTTGATCTT+TGG 0.305231 3_2:+11240093 Msa0395110:CDS
CTTGTGAGCTTTGAGCTTGA+GGG 0.317619 3_2:+11240023 Msa0395110:CDS
ACTGGCGTGCTGATGGAAAA+AGG 0.334918 3_2:+11238720 Msa0395110:CDS
GCTACATAACTTAGAGTCAT+TGG 0.356686 3_2:+11238578 Msa0395110:CDS
TAAATGAAGCCGCTGAAGTT+GGG 0.378386 3_2:-11238985 None:intergenic
GCCAGCTTGTTTATTTCACT+TGG 0.382753 3_2:-11238630 None:intergenic
CATAGAAAATCTTTGTTATG+TGG 0.384580 3_2:+11238761 Msa0395110:CDS
GTGTCAAAAGTTGGCTTTGA+AGG 0.399912 3_2:+11234695 Msa0395110:CDS
TTAACTAGACACGCAAGTTC+AGG 0.400656 3_2:-11239041 None:intergenic
TGAACTTGCGTGTCTAGTTA+AGG 0.404495 3_2:+11239043 Msa0395110:CDS
AGTGAGTCAAAATCTGAATC+TGG 0.413754 3_2:+11234421 Msa0395110:CDS
AGGGTACCTCTTTCAGTTGA+GGG 0.419371 3_2:-11239301 None:intergenic
TGGTACTTAGAAGCTTCAAA+TGG 0.425955 3_2:+11240126 Msa0395110:CDS
GGAGTTGATCCATAGAAGTT+TGG 0.434530 3_2:+11234667 Msa0395110:CDS
GTGTCTAGTTAAGGTAAGGC+TGG 0.436049 3_2:+11239052 Msa0395110:CDS
AACTACAGAAGTTGCCCAGC+TGG 0.439428 3_2:+11239015 Msa0395110:CDS
TTAAATGAAGCCGCTGAAGT+TGG 0.456648 3_2:-11238986 None:intergenic
GCTTGTGAGCTTTGAGCTTG+AGG 0.461034 3_2:+11240022 Msa0395110:CDS
AAGCTAAAACCGAGGCTGAA+TGG 0.462219 3_2:+11234393 Msa0395110:CDS
TAAGAGATTAATTCAACAAT+GGG 0.464952 3_2:+11234574 Msa0395110:CDS
GGTACTTAGAAGCTTCAAAT+GGG 0.474337 3_2:+11240127 Msa0395110:CDS
CAGTGAAGTAAATATCTTTG+AGG 0.476598 3_2:-11239346 None:intergenic
TCAAAATCTGAATCTGGAGT+TGG 0.479365 3_2:+11234427 Msa0395110:CDS
TTGGTCATGGTGTCAAAAGT+TGG 0.484369 3_2:+11234686 Msa0395110:CDS
AATATCTTTGAGGTTATGCA+TGG 0.494185 3_2:-11239336 None:intergenic
CAAAATCTGAATCTGGAGTT+GGG 0.496684 3_2:+11234428 Msa0395110:CDS
CTTTACAACTGGCGTGCTGA+TGG 0.499131 3_2:+11238713 Msa0395110:CDS
AGAAGAACTTTAGAGCAAGT+TGG 0.499881 3_2:+11234629 Msa0395110:CDS
CGCAAGTTCAGGAATCCAGC+TGG 0.508837 3_2:-11239030 None:intergenic
GTTATGCATGGGTTTGATCC+CGG 0.511154 3_2:-11239324 None:intergenic
TACCATGCTCTCTTCTTACA+CGG 0.515711 3_2:-11238857 None:intergenic
GAGGGTACCTCTTTCAGTTG+AGG 0.516911 3_2:-11239302 None:intergenic
ATGCTTTCAACAAATTCAGC+AGG 0.520963 3_2:-11239374 None:intergenic
ATTCAACAATGGGTAGCTGA+AGG 0.526615 3_2:+11234584 Msa0395110:CDS
AGTTGGAGAGGAGAATTTGT+CGG 0.538425 3_2:+11234646 Msa0395110:CDS
AACTTTAGAGCAAGTTGGAG+AGG 0.538749 3_2:+11234634 Msa0395110:CDS
TGACTTCCCGCAGCAAGTCA+TGG 0.540871 3_2:-11234739 None:intergenic
AGTTACAATGGTAAGCAAGA+AGG 0.545442 3_2:-11238665 None:intergenic
ACCAAGTGAAATAAACAAGC+TGG 0.545661 3_2:+11238629 Msa0395110:CDS
TGTCAAAAGTTGGCTTTGAA+GGG 0.546958 3_2:+11234696 Msa0395110:CDS
TGTCTAGTTAAGGTAAGGCT+GGG 0.552705 3_2:+11239053 Msa0395110:CDS
TTGCGTGTCTAGTTAAGGTA+AGG 0.556348 3_2:+11239048 Msa0395110:CDS
AAATGAAGCCGCTGAAGTTG+GGG 0.558144 3_2:-11238984 None:intergenic
AACTGAAAGAGGTACCCTCC+GGG 0.558679 3_2:+11239306 Msa0395110:CDS
GTCAAGTCCATGACTTGCTG+CGG 0.560728 3_2:+11234732 Msa0395110:CDS
TTAAGGCAGATAAGGAAGCT+AGG 0.560915 3_2:+11238828 Msa0395110:intron
ACATTTCTTCATAGTTACAA+TGG 0.561708 3_2:-11238677 None:intergenic
CAACTGAAAGAGGTACCCTC+CGG 0.565329 3_2:+11239305 Msa0395110:CDS
TTCAACAATGGGTAGCTGAA+GGG 0.567897 3_2:+11234585 Msa0395110:CDS
TCAAGTCCATGACTTGCTGC+GGG 0.568432 3_2:+11234733 Msa0395110:CDS
GGTTCACAAGGAACAAATGA+TGG 0.571278 3_2:+11240056 Msa0395110:CDS
TGTTGAAAATAGACCACCGA+TGG 0.575474 3_2:-11234369 None:intergenic
TGAAGCCGCTGAAGTTGGGG+TGG 0.578631 3_2:-11238981 None:intergenic
AAGACACTTCCTAAATCTGT+TGG 0.579080 3_2:+11238552 Msa0395110:intron
CCTCTTGCAATTGTAGCCAT+CGG 0.579184 3_2:+11234353 Msa0395110:CDS
ATTCTGTCGTTATAGATAGT+GGG 0.581597 3_2:+11239240 Msa0395110:intron
AGAAAATCTTTGTTATGTGG+AGG 0.584231 3_2:+11238764 Msa0395110:CDS
TGCATGGGTTTGATCCCGGA+GGG 0.589923 3_2:-11239320 None:intergenic
GAAGCCGCTGAAGTTGGGGT+GGG 0.591110 3_2:-11238980 None:intergenic
ATAAGAGATTAATTCAACAA+TGG 0.593441 3_2:+11234573 Msa0395110:CDS
GATCCATAGAAGTTTGGTCA+TGG 0.597286 3_2:+11234673 Msa0395110:CDS
TTCAACAAAAGCTAAAACCG+AGG 0.602072 3_2:+11234385 Msa0395110:CDS
CTTGCAATTGTAGCCATCGG+TGG 0.602302 3_2:+11234356 Msa0395110:CDS
ACCATGCTCTCTTCTTACAC+GGG 0.604564 3_2:-11238856 None:intergenic
TAGTGACATTAAGATTCTCA+AGG 0.611705 3_2:-11238914 None:intergenic
CATCCCCACCCCAACTTCAG+CGG 0.611708 3_2:+11238976 Msa0395110:CDS
ATATCTTTGAGGTTATGCAT+GGG 0.614793 3_2:-11239335 None:intergenic
GAAAGCATCGATCCTGACAA+AGG 0.622476 3_2:+11239389 Msa0395110:CDS
ATGCATGGGTTTGATCCCGG+AGG 0.624872 3_2:-11239321 None:intergenic
TAATGTCACTACAATATCTG+AGG 0.625141 3_2:+11238926 Msa0395110:CDS
GCAAGTTCAGGAATCCAGCT+GGG 0.633339 3_2:-11239029 None:intergenic
GGTGCTGTTGTAGGTTCACA+AGG 0.635993 3_2:+11240044 Msa0395110:CDS
ACCCGTGTAAGAAGAGAGCA+TGG 0.637042 3_2:+11238855 Msa0395110:CDS
AAGCCGCTGAAGTTGGGGTG+GGG 0.639364 3_2:-11238979 None:intergenic
GTACTTAGAAGCTTCAAATG+GGG 0.640359 3_2:+11240128 Msa0395110:CDS
TAAACAAGCTGGCAAAGCTG+AGG 0.640626 3_2:+11238640 Msa0395110:CDS
CCGATGGCTACAATTGCAAG+AGG 0.663649 3_2:-11234353 None:intergenic
TAGCTACACTTCTATCACGC+AGG 0.676252 3_2:-11240158 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTACTTCATTATATT+TGG - chr3_2:11235954-11235973 None:intergenic 10.0%
!!! TAAGATTTTTTTTTAGAAAT+TGG + chr3_2:11239720-11239739 Msa0395110:intron 10.0%
!!! AAGATTTTTTTTTAGAAATT+GGG + chr3_2:11239721-11239740 Msa0395110:intron 10.0%
!! AATTAATCTCTTATGATTAA+TGG - chr3_2:11234567-11234586 None:intergenic 15.0%
!!! TGATATCTTATTTTTTTCTT+GGG + chr3_2:11235031-11235050 Msa0395110:intron 15.0%
!!! TTTTATTTTAGTTGAATTGA+AGG + chr3_2:11235268-11235287 Msa0395110:intron 15.0%
!!! AAAAATGTTTTTGTTTTTGT+TGG + chr3_2:11235351-11235370 Msa0395110:intron 15.0%
!!! TTGATTTTAAGTTTGAAAAT+GGG + chr3_2:11235374-11235393 Msa0395110:intron 15.0%
!! TTGAAATTTGATTAAGAAAA+TGG + chr3_2:11235495-11235514 Msa0395110:intron 15.0%
!!! TTTAAAATGTAAATACTTAG+AGG - chr3_2:11235825-11235844 None:intergenic 15.0%
!!! AAGTATTTACATTTTAAACT+TGG + chr3_2:11235827-11235846 Msa0395110:intron 15.0%
!!! ATTTTAAAATTGTCATAATG+TGG - chr3_2:11236078-11236097 None:intergenic 15.0%
!!! ACATTATGACAATTTTAAAA+TGG + chr3_2:11236077-11236096 Msa0395110:intron 15.0%
!!! ATATTTTTTGCGTTAAAAAA+TGG - chr3_2:11236413-11236432 None:intergenic 15.0%
!!! AGAATTTTCTAAAAGATTTT+AGG + chr3_2:11236479-11236498 Msa0395110:intron 15.0%
!! CTAAAAAAAGTTCAAAAAAA+AGG - chr3_2:11237029-11237048 None:intergenic 15.0%
!!! AATGCAATTTTTAGAAAATT+AGG + chr3_2:11237795-11237814 Msa0395110:intron 15.0%
!!! TTCAAATGCAATTTTTAAAA+TGG + chr3_2:11238173-11238192 Msa0395110:intron 15.0%
!!! AAAAATTGACTAGTATTTTT+AGG + chr3_2:11238398-11238417 Msa0395110:intron 15.0%
!! TATCATAATCATATAAGTTT+GGG - chr3_2:11239472-11239491 None:intergenic 15.0%
!! ATATCATAATCATATAAGTT+TGG - chr3_2:11239473-11239492 None:intergenic 15.0%
!!! ACAATTTATTTAAAATTACG+CGG - chr3_2:11239517-11239536 None:intergenic 15.0%
!! ATAAGAGATTAATTCAACAA+TGG + chr3_2:11234573-11234592 Msa0395110:CDS 20.0%
!! TAAGAGATTAATTCAACAAT+GGG + chr3_2:11234574-11234593 Msa0395110:CDS 20.0%
!! AGTCATTATTAGAAAAATGA+AGG + chr3_2:11234757-11234776 Msa0395110:intron 20.0%
!! AGAAAAAAATAAGATATCAC+CGG - chr3_2:11235030-11235049 None:intergenic 20.0%
!!! GTGATATCTTATTTTTTTCT+TGG + chr3_2:11235030-11235049 Msa0395110:intron 20.0%
!!! GAAAGTATTTATTTAAACCT+AGG + chr3_2:11235202-11235221 Msa0395110:intron 20.0%
!!! GTTGATTTTAAGTTTGAAAA+TGG + chr3_2:11235373-11235392 Msa0395110:intron 20.0%
!! AAATGGAAAAGAAAATACAA+TGG + chr3_2:11235512-11235531 Msa0395110:intron 20.0%
!! AATGGAAAAGAAAATACAAT+GGG + chr3_2:11235513-11235532 Msa0395110:intron 20.0%
!!! AATTTTAATTTCTTGGCAAA+GGG - chr3_2:11235778-11235797 None:intergenic 20.0%
!!! TTCATGCAATTTTAATTTCT+TGG - chr3_2:11235785-11235804 None:intergenic 20.0%
!! AAGAAATTAAAATTGCATGA+AGG + chr3_2:11235784-11235803 Msa0395110:intron 20.0%
!!! TGAGAAAAATAAAGTGTTAA+AGG - chr3_2:11236176-11236195 None:intergenic 20.0%
!!! AATGAATTAAAATTGGTAAC+CGG + chr3_2:11237835-11237854 Msa0395110:intron 20.0%
!! AACGATTAAAATTGACAAAA+CGG + chr3_2:11237875-11237894 Msa0395110:intron 20.0%
!!! ATTGAAAGAAATTTTGACAT+AGG + chr3_2:11238264-11238283 Msa0395110:intron 20.0%
!!! TATTTTTAGGTCCAAAATTA+GGG + chr3_2:11238411-11238430 Msa0395110:intron 20.0%
!! AATCATATTCCTCATAATTT+GGG + chr3_2:11238483-11238502 Msa0395110:intron 20.0%
!!! TTCTAGAAATGAAAATGTTA+AGG + chr3_2:11238811-11238830 Msa0395110:intron 20.0%
!!! CAATTTATTTAAAATTACGC+GGG - chr3_2:11239516-11239535 None:intergenic 20.0%
!!! AGAACGAAAATAATTTTCAA+AGG + chr3_2:11239553-11239572 Msa0395110:intron 20.0%
!!! ATGAAGGAAAAAAATGTTTT+TGG - chr3_2:11239785-11239804 None:intergenic 20.0%
!! CTTTGTTAGTCTAGATAAAT+GGG - chr3_2:11234462-11234481 None:intergenic 25.0%
!! TCTTTGTTAGTCTAGATAAA+TGG - chr3_2:11234463-11234482 None:intergenic 25.0%
!!! GGTTTGTTAAAAAATTCGAT+GGG + chr3_2:11234606-11234625 Msa0395110:CDS 25.0%
!!! TAGTGTTTTATCTTGGTTTT+CGG + chr3_2:11234970-11234989 Msa0395110:intron 25.0%
!! TACATTTGAACCTTTTAAAC+CGG + chr3_2:11235008-11235027 Msa0395110:intron 25.0%
!!! ATCTTATTTTTTTCTTGGGA+AGG + chr3_2:11235035-11235054 Msa0395110:intron 25.0%
!!! TCTTATTTTTTTCTTGGGAA+GGG + chr3_2:11235036-11235055 Msa0395110:intron 25.0%
!! ATCTTTTCCAAATAAACCTT+GGG - chr3_2:11235548-11235567 None:intergenic 25.0%
!! AATCTTTTCCAAATAAACCT+TGG - chr3_2:11235549-11235568 None:intergenic 25.0%
! TTCACATTTGTTTGGAAAAT+TGG + chr3_2:11235581-11235600 Msa0395110:intron 25.0%
!! TTTTTCTAAGTATAAGTCCT+AGG + chr3_2:11235605-11235624 Msa0395110:intron 25.0%
!!! ATTTTAATTTCTTGGCAAAG+GGG - chr3_2:11235777-11235796 None:intergenic 25.0%
!!! CAATTTTAATTTCTTGGCAA+AGG - chr3_2:11235779-11235798 None:intergenic 25.0%
!! CATCTAATTTCTTGCATTTT+AGG - chr3_2:11235866-11235885 None:intergenic 25.0%
! GATGAATATGAAACATGAAA+TGG + chr3_2:11235914-11235933 Msa0395110:intron 25.0%
! ATATGAAACATGAAATGGAA+AGG + chr3_2:11235919-11235938 Msa0395110:intron 25.0%
! TTAAAATTGTCATAATGTGG+AGG - chr3_2:11236075-11236094 None:intergenic 25.0%
!!! GATTAGTTACTTGTTTTTCA+AGG - chr3_2:11236215-11236234 None:intergenic 25.0%
!!! TTTCTAAAAGATTTTAGGCA+TGG + chr3_2:11236484-11236503 Msa0395110:intron 25.0%
! AAATTCAAGCAATAACTCAT+AGG - chr3_2:11237263-11237282 None:intergenic 25.0%
! TTGAATTTGATTCTGATTGT+TGG + chr3_2:11237275-11237294 Msa0395110:intron 25.0%
!! ATTTTCAGATCAAAGAAACA+AGG - chr3_2:11237568-11237587 None:intergenic 25.0%
!!! TACTTTAAAGTACCTCATTT+AGG - chr3_2:11237919-11237938 None:intergenic 25.0%
! TTTGACATAGAATGAAATAG+AGG + chr3_2:11238198-11238217 Msa0395110:intron 25.0%
! ATTGAAATAAAATGCAGAGA+AGG + chr3_2:11238328-11238347 Msa0395110:intron 25.0%
!!! GTATTTTTAGGTCCAAAATT+AGG + chr3_2:11238410-11238429 Msa0395110:intron 25.0%
!! TAGATGTTATACCCTAATTT+TGG - chr3_2:11238425-11238444 None:intergenic 25.0%
! AAAATTAGGGTATAACATCT+AGG + chr3_2:11238424-11238443 Msa0395110:intron 25.0%
! GAATCATATTCCTCATAATT+TGG + chr3_2:11238482-11238501 Msa0395110:intron 25.0%
! ATCATATTCCTCATAATTTG+GGG + chr3_2:11238484-11238503 Msa0395110:intron 25.0%
! ACATTTCTTCATAGTTACAA+TGG - chr3_2:11238680-11238699 None:intergenic 25.0%
!! CACATAACAAAGATTTTCTA+TGG - chr3_2:11238763-11238782 None:intergenic 25.0%
!! CATAGAAAATCTTTGTTATG+TGG + chr3_2:11238761-11238780 Msa0395110:CDS 25.0%
!! TGAAATTTTGCATTTCCAAA+AGG + chr3_2:11239166-11239185 Msa0395110:intron 25.0%
!! GAAATTTTGCATTTCCAAAA+GGG + chr3_2:11239167-11239186 Msa0395110:intron 25.0%
! TCAAACAATCTGAATTGAAT+AGG - chr3_2:11239999-11240018 None:intergenic 25.0%
!! GGGTTTGTTAAAAAATTCGA+TGG + chr3_2:11234605-11234624 Msa0395110:CDS 30.0%
!! AATGCCTTTGAAATCATTGT+GGG - chr3_2:11234867-11234886 None:intergenic 30.0%
!! TAATGCCTTTGAAATCATTG+TGG - chr3_2:11234868-11234887 None:intergenic 30.0%
!! AGTGTTTTATCTTGGTTTTC+GGG + chr3_2:11234971-11234990 Msa0395110:intron 30.0%
!! TAAGATATCACCGGTTTAAA+AGG - chr3_2:11235021-11235040 None:intergenic 30.0%
TAGGATACTATAGTCGTTAT+GGG - chr3_2:11235130-11235149 None:intergenic 30.0%
ATAGGATACTATAGTCGTTA+TGG - chr3_2:11235131-11235150 None:intergenic 30.0%
TAACGACTATAGTATCCTAT+AGG + chr3_2:11235131-11235150 Msa0395110:intron 30.0%
AAATTAAAGACGGTTCCTAT+AGG - chr3_2:11235149-11235168 None:intergenic 30.0%
TTTCTAAGTGAAGAATTGGA+GGG + chr3_2:11235227-11235246 Msa0395110:intron 30.0%
!! GGATTTTGAAGAATAGAAAG+AGG + chr3_2:11235395-11235414 Msa0395110:intron 30.0%
AAGAAAATACAATGGGATGT+TGG + chr3_2:11235520-11235539 Msa0395110:intron 30.0%
TGAAGTTGTTCACATTTGTT+TGG + chr3_2:11235573-11235592 Msa0395110:intron 30.0%
AGCAAGAAGATACTAAACAA+AGG + chr3_2:11235975-11235994 Msa0395110:intron 30.0%
! AACACAAAGATAAAGTGTCA+AGG + chr3_2:11236002-11236021 Msa0395110:intron 30.0%
ACGAATAGAACAAAGCTTTA+AGG + chr3_2:11237136-11237155 Msa0395110:intron 30.0%
!! TTGAGCTTTGTTGATGAATT+CGG + chr3_2:11237352-11237371 Msa0395110:intron 30.0%
!! ATTCTTTGACGGATTTGTTT+CGG + chr3_2:11237393-11237412 Msa0395110:intron 30.0%
!!! ATTTTCTGGAATTTTCTTGC+AGG + chr3_2:11237500-11237519 Msa0395110:intron 30.0%
ACTAACTCTTGGACAAATAA+AGG + chr3_2:11237726-11237745 Msa0395110:intron 30.0%
TTTCACTTTACGTTATTTGC+CGG - chr3_2:11237857-11237876 None:intergenic 30.0%
! CTCAGATGCAAACTTTAAAA+TGG + chr3_2:11238007-11238026 Msa0395110:intron 30.0%
! TATAACATCTAGGATTCTGA+AGG + chr3_2:11238434-11238453 Msa0395110:intron 30.0%
AAAAGATTCCCCAAATTATG+AGG - chr3_2:11238495-11238514 None:intergenic 30.0%
TTGAGATACATAAACCTAAG+AGG + chr3_2:11238519-11238538 Msa0395110:intron 30.0%
!! TCTTTACTTTTGTACCTCTT+AGG - chr3_2:11238536-11238555 None:intergenic 30.0%
! AGAAAATCTTTGTTATGTGG+AGG + chr3_2:11238764-11238783 Msa0395110:CDS 30.0%
TGAAAATGTTAAGGCAGATA+AGG + chr3_2:11238820-11238839 Msa0395110:intron 30.0%
TAGTGACATTAAGATTCTCA+AGG - chr3_2:11238917-11238936 None:intergenic 30.0%
TAATGTCACTACAATATCTG+AGG + chr3_2:11238926-11238945 Msa0395110:CDS 30.0%
AAACACAGATTGAGAAGATT+TGG - chr3_2:11239125-11239144 None:intergenic 30.0%
AATTCTGTCGTTATAGATAG+TGG + chr3_2:11239239-11239258 Msa0395110:intron 30.0%
ATTCTGTCGTTATAGATAGT+GGG + chr3_2:11239240-11239259 Msa0395110:intron 30.0%
CAGTGAAGTAAATATCTTTG+AGG - chr3_2:11239349-11239368 None:intergenic 30.0%
TTGAGAAAATCGACGATATT+TGG + chr3_2:11239588-11239607 Msa0395110:intron 30.0%
ACTTAATTTCTCATGTTCGT+TGG - chr3_2:11239635-11239654 None:intergenic 30.0%
AACGAACATGAGAAATTAAG+TGG + chr3_2:11239634-11239653 Msa0395110:intron 30.0%
ATTAAGTGGTTACGAATTAG+CGG + chr3_2:11239648-11239667 Msa0395110:intron 30.0%
!!! TTTGGAATGTTTTAGAAGCT+TGG - chr3_2:11239767-11239786 None:intergenic 30.0%
AGAGAGGAAGAAAAAAATGA+AGG - chr3_2:11239801-11239820 None:intergenic 30.0%
!! TTTTCATGTGGATTTTAGTG+AGG - chr3_2:11239871-11239890 None:intergenic 30.0%
! CAATTACATGTGTTTTCATG+TGG - chr3_2:11239883-11239902 None:intergenic 30.0%
AATAGGAAACATGGAATTTG+GGG - chr3_2:11239982-11240001 None:intergenic 30.0%
GAATAGGAAACATGGAATTT+GGG - chr3_2:11239983-11240002 None:intergenic 30.0%
TGAATAGGAAACATGGAATT+TGG - chr3_2:11239984-11240003 None:intergenic 30.0%
TCTGAATTGAATAGGAAACA+TGG - chr3_2:11239991-11240010 None:intergenic 30.0%
!!! TGATCTTTGGTGTTTTGATT+TGG + chr3_2:11240106-11240125 Msa0395110:CDS 30.0%
TTCAACAAAAGCTAAAACCG+AGG + chr3_2:11234385-11234404 Msa0395110:CDS 35.0%
AGTGAGTCAAAATCTGAATC+TGG + chr3_2:11234421-11234440 Msa0395110:CDS 35.0%
! TCAAAATCTGAATCTGGAGT+TGG + chr3_2:11234427-11234446 Msa0395110:CDS 35.0%
! CAAAATCTGAATCTGGAGTT+GGG + chr3_2:11234428-11234447 Msa0395110:CDS 35.0%
! ATGCATGGTTTCAAGTAGTA+AGG - chr3_2:11234512-11234531 None:intergenic 35.0%
AAACCATGCATCTTGTATCT+TGG + chr3_2:11234521-11234540 Msa0395110:intron 35.0%
ATTCCAAGATACAAGATGCA+TGG - chr3_2:11234527-11234546 None:intergenic 35.0%
TGATTAATGGAGTAGTCTTC+TGG - chr3_2:11234554-11234573 None:intergenic 35.0%
!! AGAAGAACTTTAGAGCAAGT+TGG + chr3_2:11234629-11234648 Msa0395110:CDS 35.0%
!! TGTCAAAAGTTGGCTTTGAA+GGG + chr3_2:11234696-11234715 Msa0395110:CDS 35.0%
!! TCACATTTTCGTGCTATTCA+TGG + chr3_2:11234893-11234912 Msa0395110:intron 35.0%
! TTTCGTGCTATTCATGGATT+TGG + chr3_2:11234899-11234918 Msa0395110:intron 35.0%
GCTATTCATGGATTTGGAAA+AGG + chr3_2:11234905-11234924 Msa0395110:intron 35.0%
ATTCATGGATTTGGAAAAGG+TGG + chr3_2:11234908-11234927 Msa0395110:intron 35.0%
ATTTGGAAAAGGTGGATGAT+TGG + chr3_2:11234916-11234935 Msa0395110:intron 35.0%
! CTGAGTCTAGTGTTTTATCT+TGG + chr3_2:11234963-11234982 Msa0395110:intron 35.0%
TTCTTCACTTAGAAACTCCT+AGG - chr3_2:11235222-11235241 None:intergenic 35.0%
GGAGTTTCTAAGTGAAGAAT+TGG + chr3_2:11235223-11235242 Msa0395110:intron 35.0%
GTTTCTAAGTGAAGAATTGG+AGG + chr3_2:11235226-11235245 Msa0395110:intron 35.0%
! AGTGGATTTGATCCCTTAAA+CGG - chr3_2:11235317-11235336 None:intergenic 35.0%
!! TTTTTGAGAGAGAACTACAG+TGG - chr3_2:11235335-11235354 None:intergenic 35.0%
CATGAGATTAGGAAATTGTG+AGG + chr3_2:11235427-11235446 Msa0395110:intron 35.0%
GTATGTTTAGATGAATGCCT+AGG - chr3_2:11235625-11235644 None:intergenic 35.0%
GCATGTTTAGATGTATGTCT+AGG - chr3_2:11235651-11235670 None:intergenic 35.0%
! CATGCATATTCTAGCTATAG+TGG + chr3_2:11235666-11235685 Msa0395110:intron 35.0%
! GTATCTAGGGTACAATGTAA+AGG - chr3_2:11235745-11235764 None:intergenic 35.0%
TGTACCCTAGATACATTCTA+TGG + chr3_2:11235751-11235770 Msa0395110:intron 35.0%
AGATGAAGAAGAAGATGAAG+TGG + chr3_2:11235881-11235900 Msa0395110:intron 35.0%
GATGAAGAAGAAGATGAAGT+GGG + chr3_2:11235882-11235901 Msa0395110:intron 35.0%
GAGATTTGTGATGTGTGAAT+TGG - chr3_2:11236290-11236309 None:intergenic 35.0%
CTCAAGCATGTATCAAAGAT+TGG + chr3_2:11236307-11236326 Msa0395110:intron 35.0%
! AAAAGATTTTAGGCATGGTG+AGG + chr3_2:11236489-11236508 Msa0395110:intron 35.0%
! AAAGATTTTAGGCATGGTGA+GGG + chr3_2:11236490-11236509 Msa0395110:intron 35.0%
! TCTAAGTCATTCTAGAGAGA+AGG - chr3_2:11236888-11236907 None:intergenic 35.0%
AAAAAAAGGAGAAAACGCTC+CGG - chr3_2:11237015-11237034 None:intergenic 35.0%
TTCGAAACAAGAAGAAGAAG+AGG - chr3_2:11237063-11237082 None:intergenic 35.0%
! TCTTCTTCTTGTTTCGAATC+TGG + chr3_2:11237065-11237084 Msa0395110:intron 35.0%
! TTTAAGGCAAAGAGAGAAGA+AGG + chr3_2:11237152-11237171 Msa0395110:intron 35.0%
!! AGTCTAACCTCGTTTTGAAT+CGG + chr3_2:11237177-11237196 Msa0395110:intron 35.0%
! TTTTTCTCCGATTCAAAACG+AGG - chr3_2:11237187-11237206 None:intergenic 35.0%
CGTTGTTCTTGATTCTTTGA+CGG + chr3_2:11237382-11237401 Msa0395110:intron 35.0%
CCTCACAAATTCATCATCAT+CGG - chr3_2:11237437-11237456 None:intergenic 35.0%
GATGATGAATTTGTGAGGAA+CGG + chr3_2:11237439-11237458 Msa0395110:intron 35.0%
! TTGTGGTGATTACGATTTTC+TGG + chr3_2:11237486-11237505 Msa0395110:intron 35.0%
ATGATGTGTCTTGCAATGAA+TGG + chr3_2:11237619-11237638 Msa0395110:intron 35.0%
! GACTATGACTTGGACAATTA+AGG + chr3_2:11237767-11237786 Msa0395110:intron 35.0%
GGTCATTTCACACGAAAATT+TGG - chr3_2:11237953-11237972 None:intergenic 35.0%
AAAAGACTAAAATGCCCCTA+GGG + chr3_2:11238128-11238147 Msa0395110:intron 35.0%
GCTTATTCACACTACTTGAA+AGG + chr3_2:11238220-11238239 Msa0395110:intron 35.0%
TCTGCAAAATTCACATGCAA+GGG - chr3_2:11238304-11238323 None:intergenic 35.0%
ATCTGCAAAATTCACATGCA+AGG - chr3_2:11238305-11238324 None:intergenic 35.0%
AAGACACTTCCTAAATCTGT+TGG + chr3_2:11238552-11238571 Msa0395110:intron 35.0%
GCTACATAACTTAGAGTCAT+TGG + chr3_2:11238578-11238597 Msa0395110:CDS 35.0%
ACCAAGTGAAATAAACAAGC+TGG + chr3_2:11238629-11238648 Msa0395110:CDS 35.0%
AGTTACAATGGTAAGCAAGA+AGG - chr3_2:11238668-11238687 None:intergenic 35.0%
! TCTCTTTTGAGCTTTACAAC+TGG + chr3_2:11238702-11238721 Msa0395110:CDS 35.0%
ATCTTCTCAATCTGTGTTTG+TGG + chr3_2:11239126-11239145 Msa0395110:intron 35.0%
TCTTCTCAATCTGTGTTTGT+GGG + chr3_2:11239127-11239146 Msa0395110:intron 35.0%
! ATTTTGCATTTCCAAAAGGG+AGG + chr3_2:11239170-11239189 Msa0395110:intron 35.0%
! TTTTGCATTTCCAAAAGGGA+GGG + chr3_2:11239171-11239190 Msa0395110:intron 35.0%
!!! ATTTTTGAAACCCTCCCTTT+TGG - chr3_2:11239184-11239203 None:intergenic 35.0%
AAAAATCCCTCAACTGAAAG+AGG + chr3_2:11239295-11239314 Msa0395110:CDS 35.0%
ATGCTTTCAACAAATTCAGC+AGG - chr3_2:11239377-11239396 None:intergenic 35.0%
! AATTGTGTCTTTTCCCTTGA+AGG + chr3_2:11239676-11239695 Msa0395110:intron 35.0%
! ATTGTGTCTTTTCCCTTGAA+GGG + chr3_2:11239677-11239696 Msa0395110:intron 35.0%
ATTACCAAATTGCCCTTCAA+GGG - chr3_2:11239692-11239711 None:intergenic 35.0%
AATTACCAAATTGCCCTTCA+AGG - chr3_2:11239693-11239712 None:intergenic 35.0%
! TGAAGGGCAATTTGGTAATT+TGG + chr3_2:11239693-11239712 Msa0395110:intron 35.0%
! GAAGGGCAATTTGGTAATTT+GGG + chr3_2:11239694-11239713 Msa0395110:intron 35.0%
TTTAGAAGCTTGGAGAAAGT+GGG - chr3_2:11239757-11239776 None:intergenic 35.0%
!! TTTTAGAAGCTTGGAGAAAG+TGG - chr3_2:11239758-11239777 None:intergenic 35.0%
AACATGGAATTTGGGGATAA+AGG - chr3_2:11239975-11239994 None:intergenic 35.0%
!! CATGTAAGCTTGTTGATCTT+TGG + chr3_2:11240093-11240112 Msa0395110:CDS 35.0%
TGGTACTTAGAAGCTTCAAA+TGG + chr3_2:11240126-11240145 Msa0395110:CDS 35.0%
GGTACTTAGAAGCTTCAAAT+GGG + chr3_2:11240127-11240146 Msa0395110:CDS 35.0%
GTACTTAGAAGCTTCAAATG+GGG + chr3_2:11240128-11240147 Msa0395110:CDS 35.0%
TGTTGAAAATAGACCACCGA+TGG - chr3_2:11234372-11234391 None:intergenic 40.0%
ATTCAACAATGGGTAGCTGA+AGG + chr3_2:11234584-11234603 Msa0395110:CDS 40.0%
TTCAACAATGGGTAGCTGAA+GGG + chr3_2:11234585-11234604 Msa0395110:CDS 40.0%
!! AACTTTAGAGCAAGTTGGAG+AGG + chr3_2:11234634-11234653 Msa0395110:CDS 40.0%
AGTTGGAGAGGAGAATTTGT+CGG + chr3_2:11234646-11234665 Msa0395110:CDS 40.0%
! GGAGTTGATCCATAGAAGTT+TGG + chr3_2:11234667-11234686 Msa0395110:CDS 40.0%
GATCCATAGAAGTTTGGTCA+TGG + chr3_2:11234673-11234692 Msa0395110:CDS 40.0%
ACACCATGACCAAACTTCTA+TGG - chr3_2:11234679-11234698 None:intergenic 40.0%
! TTGGTCATGGTGTCAAAAGT+TGG + chr3_2:11234686-11234705 Msa0395110:CDS 40.0%
!! GTGTCAAAAGTTGGCTTTGA+AGG + chr3_2:11234695-11234714 Msa0395110:CDS 40.0%
CTTTGTGCATGAAGATGATG+AGG + chr3_2:11234796-11234815 Msa0395110:intron 40.0%
GACGTCTAGTTATTCCAACT+GGG - chr3_2:11234826-11234845 None:intergenic 40.0%
AGACGTCTAGTTATTCCAAC+TGG - chr3_2:11234827-11234846 None:intergenic 40.0%
AGCTCCCACAATGATTTCAA+AGG + chr3_2:11234860-11234879 Msa0395110:intron 40.0%
GTGGATTTGATCCCTTAAAC+GGG - chr3_2:11235316-11235335 None:intergenic 40.0%
AAGAATAGAAAGAGGCCTCA+AGG + chr3_2:11235403-11235422 Msa0395110:intron 40.0%
AGAATAGAAAGAGGCCTCAA+GGG + chr3_2:11235404-11235423 Msa0395110:intron 40.0%
GTTGGATCCCAAGGTTTATT+TGG + chr3_2:11235538-11235557 Msa0395110:intron 40.0%
GGGTACAATGTAAAGGACAA+TGG - chr3_2:11235738-11235757 None:intergenic 40.0%
!! GTGTGAATTGGTGATGGATT+TGG - chr3_2:11236278-11236297 None:intergenic 40.0%
TGTGATGTGTGAATTGGTGA+TGG - chr3_2:11236284-11236303 None:intergenic 40.0%
! GAGCGAGTGTGCATTAATTT+TGG - chr3_2:11236335-11236354 None:intergenic 40.0%
! GCTGCATTTTGCTTATTTCC+TGG - chr3_2:11236547-11236566 None:intergenic 40.0%
CCAAGATCCAGCATATGTTT+GGG - chr3_2:11236594-11236613 None:intergenic 40.0%
TCCAAGATCCAGCATATGTT+TGG - chr3_2:11236595-11236614 None:intergenic 40.0%
TCACTGGAAGGTAGATCTAA+CGG + chr3_2:11236744-11236763 Msa0395110:intron 40.0%
AGGAAGAAGAGATCTAAGGA+TGG + chr3_2:11236769-11236788 Msa0395110:intron 40.0%
AAGAAGAGATCTAAGGATGG+AGG + chr3_2:11236772-11236791 Msa0395110:intron 40.0%
CCTATAAAAGGTTTGAGGAC+CGG + chr3_2:11236839-11236858 Msa0395110:intron 40.0%
AAGGTGAAGGAAAGGAATGA+GGG - chr3_2:11236869-11236888 None:intergenic 40.0%
! TCATTCTAGAGAGAAGGTGA+AGG - chr3_2:11236882-11236901 None:intergenic 40.0%
!!! CTTCTTCTTCGTTTTGGTTC+CGG - chr3_2:11236946-11236965 None:intergenic 40.0%
TCGGAGAAAAAGTAGATCGT+AGG + chr3_2:11237196-11237215 Msa0395110:intron 40.0%
CGGAGAAAAAGTAGATCGTA+GGG + chr3_2:11237197-11237216 Msa0395110:intron 40.0%
AACTCATAGGTTCGCAGAAA+AGG - chr3_2:11237250-11237269 None:intergenic 40.0%
TCAACAAAGCTCAACGTCAT+AGG - chr3_2:11237346-11237365 None:intergenic 40.0%
AGAATCAAGAACAACGTCTC+AGG - chr3_2:11237378-11237397 None:intergenic 40.0%
!! TTGACGGATTTGTTTCGGTT+TGG + chr3_2:11237398-11237417 Msa0395110:intron 40.0%
! CCGATGATGATGAATTTGTG+AGG + chr3_2:11237434-11237453 Msa0395110:intron 40.0%
GTTGGAATTGGAACTGGAAT+TGG + chr3_2:11237463-11237482 Msa0395110:intron 40.0%
ATTGGAACTGGAATTGGTTG+TGG + chr3_2:11237469-11237488 Msa0395110:intron 40.0%
GAATGGTGATTCTGATGAGT+TGG + chr3_2:11237636-11237655 Msa0395110:intron 40.0%
ACCTGTTAGATGATGACATG+TGG + chr3_2:11237699-11237718 Msa0395110:intron 40.0%
CATGTGGCATAACTAACTCT+TGG + chr3_2:11237715-11237734 Msa0395110:intron 40.0%
ACAAATAAAGGACTGACACG+TGG + chr3_2:11237738-11237757 Msa0395110:intron 40.0%
AATTGTCCAAGTCATAGTCC+AGG - chr3_2:11237766-11237785 None:intergenic 40.0%
!! AACGGACTAAAACGAACCAA+TGG + chr3_2:11237893-11237912 Msa0395110:intron 40.0%
AAGTACCTCATTTAGGCCAT+TGG - chr3_2:11237912-11237931 None:intergenic 40.0%
!! TTTCAGTCGTTTTAGCCTCA+GGG - chr3_2:11237983-11238002 None:intergenic 40.0%
!! TTTTCAGTCGTTTTAGCCTC+AGG - chr3_2:11237984-11238003 None:intergenic 40.0%
GAAAAGACTAAAATGCCCCT+AGG + chr3_2:11238127-11238146 Msa0395110:intron 40.0%
AAAGACTAAAATGCCCCTAG+GGG + chr3_2:11238129-11238148 Msa0395110:intron 40.0%
!! CTGAAGGTACTTGACATTCA+AGG + chr3_2:11238450-11238469 Msa0395110:intron 40.0%
TGTAGCTCACCAACAGATTT+AGG - chr3_2:11238564-11238583 None:intergenic 40.0%
! GCCAGCTTGTTTATTTCACT+TGG - chr3_2:11238633-11238652 None:intergenic 40.0%
TGTTATGTGGAGGTAGATCA+TGG + chr3_2:11238774-11238793 Msa0395110:intron 40.0%
GTTATGTGGAGGTAGATCAT+GGG + chr3_2:11238775-11238794 Msa0395110:intron 40.0%
TTATGTGGAGGTAGATCATG+GGG + chr3_2:11238776-11238795 Msa0395110:intron 40.0%
TTAAGGCAGATAAGGAAGCT+AGG + chr3_2:11238828-11238847 Msa0395110:intron 40.0%
TACCATGCTCTCTTCTTACA+CGG - chr3_2:11238860-11238879 None:intergenic 40.0%
CTCTTCTATTGCAGCACTTA+AGG - chr3_2:11238886-11238905 None:intergenic 40.0%
TAAATGAAGCCGCTGAAGTT+GGG - chr3_2:11238988-11239007 None:intergenic 40.0%
TTAAATGAAGCCGCTGAAGT+TGG - chr3_2:11238989-11239008 None:intergenic 40.0%
TTAACTAGACACGCAAGTTC+AGG - chr3_2:11239044-11239063 None:intergenic 40.0%
TGAACTTGCGTGTCTAGTTA+AGG + chr3_2:11239043-11239062 Msa0395110:CDS 40.0%
TTGCGTGTCTAGTTAAGGTA+AGG + chr3_2:11239048-11239067 Msa0395110:CDS 40.0%
TGTCTAGTTAAGGTAAGGCT+GGG + chr3_2:11239053-11239072 Msa0395110:CDS 40.0%
TTGTGGGACAATTGCTATGA+TGG + chr3_2:11239143-11239162 Msa0395110:intron 40.0%
! GAGTAGTCTTTTCCTTTGTC+AGG - chr3_2:11239404-11239423 None:intergenic 40.0%
CAGTGACGAACAAATACAAG+AGG - chr3_2:11239443-11239462 None:intergenic 40.0%
CTCTTGTATTTGTTCGTCAC+TGG + chr3_2:11239441-11239460 Msa0395110:intron 40.0%
GTATTTGTTCGTCACTGGTA+TGG + chr3_2:11239446-11239465 Msa0395110:intron 40.0%
! TTTTCCCTTGAAGGGCAATT+TGG + chr3_2:11239685-11239704 Msa0395110:intron 40.0%
!! GGATTTTAGTGAGGATTGAG+TGG - chr3_2:11239862-11239881 None:intergenic 40.0%
TATATGACACAAGCAAGCCA+TGG + chr3_2:11239917-11239936 Msa0395110:intron 40.0%
AGGTATGATTCAGCTGATGA+GGG - chr3_2:11239955-11239974 None:intergenic 40.0%
AAGGTATGATTCAGCTGATG+AGG - chr3_2:11239956-11239975 None:intergenic 40.0%
GGTTCACAAGGAACAAATGA+TGG + chr3_2:11240056-11240075 Msa0395110:CDS 40.0%
CCTCTTGCAATTGTAGCCAT+CGG + chr3_2:11234353-11234372 Msa0395110:CDS 45.0%
AAGCTAAAACCGAGGCTGAA+TGG + chr3_2:11234393-11234412 Msa0395110:CDS 45.0%
! CACTGTTTTCCATTCAGCCT+CGG - chr3_2:11234405-11234424 None:intergenic 45.0%
AGCAAAACCCTTGAGAATCG+AGG + chr3_2:11235067-11235086 Msa0395110:intron 45.0%
GCGCGCGTAGAAATTAAAGA+CGG - chr3_2:11235159-11235178 None:intergenic 45.0%
GAAGAATTGGAGGGAGAAGA+AGG + chr3_2:11235236-11235255 Msa0395110:intron 45.0%
TTGCCTACGTACCCGTTTAA+GGG + chr3_2:11235302-11235321 Msa0395110:intron 45.0%
TTCCTAATCTCATGCCCTTG+AGG - chr3_2:11235421-11235440 None:intergenic 45.0%
GGGGCCATAGAATGTATCTA+GGG - chr3_2:11235758-11235777 None:intergenic 45.0%
AGGGGCCATAGAATGTATCT+AGG - chr3_2:11235759-11235778 None:intergenic 45.0%
!! GTGATGGATTTGGCACTGTT+TGG - chr3_2:11236268-11236287 None:intergenic 45.0%
!! GTGAGGGTGTAAAAAGCACT+AGG + chr3_2:11236506-11236525 Msa0395110:intron 45.0%
CCCAAACATATGCTGGATCT+TGG + chr3_2:11236591-11236610 Msa0395110:intron 45.0%
! CTTGGATCTAGGGTTTCCAT+GGG - chr3_2:11236655-11236674 None:intergenic 45.0%
CATGGAAACCCTAGATCCAA+GGG + chr3_2:11236654-11236673 Msa0395110:intron 45.0%
GGCAAGGAAGAAGAGATCTA+AGG + chr3_2:11236765-11236784 Msa0395110:intron 45.0%
CTAAGGATGGAGGAGAAAAC+CGG + chr3_2:11236782-11236801 Msa0395110:intron 45.0%
! CTTTTATAGGCCTGCTGAAC+CGG - chr3_2:11236829-11236848 None:intergenic 45.0%
GCAGGCCTATAAAAGGTTTG+AGG + chr3_2:11236834-11236853 Msa0395110:intron 45.0%
! CCGGTCCTCAAACCTTTTAT+AGG - chr3_2:11236842-11236861 None:intergenic 45.0%
GGAAAGGAATGAGGGAAAAC+CGG - chr3_2:11236861-11236880 None:intergenic 45.0%
GAAGGTGAAGGAAAGGAATG+AGG - chr3_2:11236870-11236889 None:intergenic 45.0%
CTAGAGAGAAGGTGAAGGAA+AGG - chr3_2:11236877-11236896 None:intergenic 45.0%
CGGAACCAAAACGAAGAAGA+AGG + chr3_2:11236944-11236963 Msa0395110:intron 45.0%
ACCAAAACGAAGAAGAAGGC+CGG + chr3_2:11236948-11236967 Msa0395110:intron 45.0%
AGGAAAGCGAAGAAGAGAAG+AGG - chr3_2:11237230-11237249 None:intergenic 45.0%
GAATTTGTGAGGAACGGTGT+TGG + chr3_2:11237445-11237464 Msa0395110:intron 45.0%
! AACGGTGTTGGAATTGGAAC+TGG + chr3_2:11237457-11237476 Msa0395110:intron 45.0%
AGCTATAGAAGCTGACGCAA+GGG - chr3_2:11237662-11237681 None:intergenic 45.0%
TGTCATCATCTAACAGGTCC+AGG - chr3_2:11237697-11237716 None:intergenic 45.0%
GCCACATGTCATCATCTAAC+AGG - chr3_2:11237703-11237722 None:intergenic 45.0%
ACGAACCAATGGCCTAAATG+AGG + chr3_2:11237904-11237923 Msa0395110:intron 45.0%
CACGAAAATTTGGCAGAGAG+AGG - chr3_2:11237943-11237962 None:intergenic 45.0%
AAATGACCAAAATGCCCCTG+AGG + chr3_2:11237965-11237984 Msa0395110:intron 45.0%
!!! TTTTAGCCTCAGGGGCATTT+TGG - chr3_2:11237974-11237993 None:intergenic 45.0%
!! TTCAGTCGTTTTAGCCTCAG+GGG - chr3_2:11237982-11238001 None:intergenic 45.0%
! TTGAGTCAGTTTTGCCCCTA+GGG - chr3_2:11238146-11238165 None:intergenic 45.0%
! TTTGAGTCAGTTTTGCCCCT+AGG - chr3_2:11238147-11238166 None:intergenic 45.0%
TAAACAAGCTGGCAAAGCTG+AGG + chr3_2:11238640-11238659 Msa0395110:CDS 45.0%
TATGTGGAGGTAGATCATGG+GGG + chr3_2:11238777-11238796 Msa0395110:intron 45.0%
ACCATGCTCTCTTCTTACAC+GGG - chr3_2:11238859-11238878 None:intergenic 45.0%
AAATGAAGCCGCTGAAGTTG+GGG - chr3_2:11238987-11239006 None:intergenic 45.0%
GTGTCTAGTTAAGGTAAGGC+TGG + chr3_2:11239052-11239071 Msa0395110:CDS 45.0%
! AGGGTACCTCTTTCAGTTGA+GGG - chr3_2:11239304-11239323 None:intergenic 45.0%
!! GAAAGCATCGATCCTGACAA+AGG + chr3_2:11239389-11239408 Msa0395110:CDS 45.0%
AAGTGGTTACGAATTAGCGG+AGG + chr3_2:11239651-11239670 Msa0395110:intron 45.0%
AGAAGCAATGGAGAGAAGGA+AGG - chr3_2:11239838-11239857 None:intergenic 45.0%
TGGAAGAAGCAATGGAGAGA+AGG - chr3_2:11239842-11239861 None:intergenic 45.0%
GGATTGAGTGGAAGAAGCAA+TGG - chr3_2:11239850-11239869 None:intergenic 45.0%
!! CTTGTGAGCTTTGAGCTTGA+GGG + chr3_2:11240023-11240042 Msa0395110:CDS 45.0%
!! AAAATAAAATGAATTAAAAT+TGG + chr3_2:11237828-11237847 Msa0395110:intron 5.0%
CCGATGGCTACAATTGCAAG+AGG - chr3_2:11234356-11234375 None:intergenic 50.0%
CTTGCAATTGTAGCCATCGG+TGG + chr3_2:11234356-11234375 Msa0395110:CDS 50.0%
!! GTCAAGTCCATGACTTGCTG+CGG + chr3_2:11234732-11234751 Msa0395110:CDS 50.0%
!! TCAAGTCCATGACTTGCTGC+GGG + chr3_2:11234733-11234752 Msa0395110:CDS 50.0%
AACCCTTGAGAATCGAGGTC+CGG + chr3_2:11235072-11235091 Msa0395110:intron 50.0%
!! TCCGGGAGTTGTTTTCGCTA+CGG + chr3_2:11235090-11235109 Msa0395110:intron 50.0%
!! GAGTTGTTTTCGCTACGGGA+AGG + chr3_2:11235095-11235114 Msa0395110:intron 50.0%
!! TTTCGCTACGGGAAGGTGTT+AGG + chr3_2:11235102-11235121 Msa0395110:intron 50.0%
CTTAAACGGGTACGTAGGCA+AGG - chr3_2:11235303-11235322 None:intergenic 50.0%
CTTGCCTACGTACCCGTTTA+AGG + chr3_2:11235301-11235320 Msa0395110:intron 50.0%
GATCCCTTAAACGGGTACGT+AGG - chr3_2:11235308-11235327 None:intergenic 50.0%
CAATGGGATGTTGGATCCCA+AGG + chr3_2:11235529-11235548 Msa0395110:intron 50.0%
AGTGGTGTGTGTGCATGTGT+CGG + chr3_2:11235684-11235703 Msa0395110:intron 50.0%
!! AAGCCTAAAGAAAGCGCTCC+AGG + chr3_2:11236568-11236587 Msa0395110:intron 50.0%
ATCCAGCATATGTTTGGGCC+TGG - chr3_2:11236589-11236608 None:intergenic 50.0%
TTGGATCATCCAAACGCCCT+GGG + chr3_2:11236610-11236629 Msa0395110:intron 50.0%
GTTGGATTGATCCAGTCCCA+TGG + chr3_2:11236636-11236655 Msa0395110:intron 50.0%
! ATCTAGGGTTTCCATGGGAC+TGG - chr3_2:11236650-11236669 None:intergenic 50.0%
! CCTTGGATCTAGGGTTTCCA+TGG - chr3_2:11236656-11236675 None:intergenic 50.0%
CCATGGAAACCCTAGATCCA+AGG + chr3_2:11236653-11236672 Msa0395110:intron 50.0%
TGCATGGAAAGGCAAGATCC+AGG + chr3_2:11236712-11236731 Msa0395110:intron 50.0%
GGAAGGTAGATCTAACGGCA+AGG + chr3_2:11236749-11236768 Msa0395110:intron 50.0%
! TGGTTTGGCATGAACCGAAC+CGG + chr3_2:11236807-11236826 Msa0395110:intron 50.0%
CGGTTCAGCAGGCCTATAAA+AGG + chr3_2:11236827-11236846 Msa0395110:intron 50.0%
! TCCGGCCTTCTTCTTCGTTT+TGG - chr3_2:11236952-11236971 None:intergenic 50.0%
AAGGAGAAAACGCTCCGGTA+CGG - chr3_2:11237010-11237029 None:intergenic 50.0%
! GTGAGGAACGGTGTTGGAAT+TGG + chr3_2:11237451-11237470 Msa0395110:intron 50.0%
CAGCTATAGAAGCTGACGCA+AGG - chr3_2:11237663-11237682 None:intergenic 50.0%
ATAGCTGATGTGTGACTGCC+TGG + chr3_2:11237676-11237695 Msa0395110:intron 50.0%
! TGAGTCAGTTTTGCCCCTAG+GGG - chr3_2:11238145-11238164 None:intergenic 50.0%
CTTTACAACTGGCGTGCTGA+TGG + chr3_2:11238713-11238732 Msa0395110:CDS 50.0%
! ACTGGCGTGCTGATGGAAAA+AGG + chr3_2:11238720-11238739 Msa0395110:CDS 50.0%
ACCCGTGTAAGAAGAGAGCA+TGG + chr3_2:11238855-11238874 Msa0395110:CDS 50.0%
AACTACAGAAGTTGCCCAGC+TGG + chr3_2:11239015-11239034 Msa0395110:CDS 50.0%
GCAAGTTCAGGAATCCAGCT+GGG - chr3_2:11239032-11239051 None:intergenic 50.0%
!! GAGGGTACCTCTTTCAGTTG+AGG - chr3_2:11239305-11239324 None:intergenic 50.0%
!! CAACTGAAAGAGGTACCCTC+CGG + chr3_2:11239305-11239324 Msa0395110:CDS 50.0%
!! AACTGAAAGAGGTACCCTCC+GGG + chr3_2:11239306-11239325 Msa0395110:CDS 50.0%
GGAGAGAAGGAAGGATGACA+AGG - chr3_2:11239829-11239848 None:intergenic 50.0%
GAGGGAGAAGAGGAAATCCA+TGG - chr3_2:11239937-11239956 None:intergenic 50.0%
TTCAGCTGATGAGGGAGAAG+AGG - chr3_2:11239947-11239966 None:intergenic 50.0%
!! GCTTGTGAGCTTTGAGCTTG+AGG + chr3_2:11240022-11240041 Msa0395110:CDS 50.0%
!! GGTGCTGTTGTAGGTTCACA+AGG + chr3_2:11240044-11240063 Msa0395110:CDS 50.0%
TGACTTCCCGCAGCAAGTCA+TGG - chr3_2:11234742-11234761 None:intergenic 55.0%
GATGATGAGGCAGTCCCAGT+TGG + chr3_2:11234809-11234828 Msa0395110:intron 55.0%
ACCCTTGAGAATCGAGGTCC+GGG + chr3_2:11235073-11235092 Msa0395110:intron 55.0%
TCCCGGACCTCGATTCTCAA+GGG - chr3_2:11235077-11235096 None:intergenic 55.0%
CCCGTAGCGAAAACAACTCC+CGG - chr3_2:11235094-11235113 None:intergenic 55.0%
!! CCGGGAGTTGTTTTCGCTAC+GGG + chr3_2:11235091-11235110 Msa0395110:intron 55.0%
! GGCCTCAAGGGCATGAGATT+AGG + chr3_2:11235416-11235435 Msa0395110:intron 55.0%
! GCATGTGTCGGTGCTTGTGT+CGG + chr3_2:11235696-11235715 Msa0395110:intron 55.0%
AGGCTGCGTGACAAATAGCC+AGG + chr3_2:11236526-11236545 Msa0395110:intron 55.0%
CTCCAGGCCCAAACATATGC+TGG + chr3_2:11236584-11236603 Msa0395110:intron 55.0%
CTTGGATCATCCAAACGCCC+TGG + chr3_2:11236609-11236628 Msa0395110:intron 55.0%
GGATCAATCCAACGCTCCCA+GGG - chr3_2:11236629-11236648 None:intergenic 55.0%
TGGATCAATCCAACGCTCCC+AGG - chr3_2:11236630-11236649 None:intergenic 55.0%
ACCCTAGATCCAAGGGTCCT+AGG + chr3_2:11236661-11236680 Msa0395110:intron 55.0%
GCCTAGGACCCTTGGATCTA+GGG - chr3_2:11236665-11236684 None:intergenic 55.0%
TTGACGTTACCATGCGCTGC+TGG - chr3_2:11236687-11236706 None:intergenic 55.0%
! GCAGCGCATGGTAACGTCAA+AGG + chr3_2:11236687-11236706 Msa0395110:intron 55.0%
! GGTAACGTCAAAGGCGTGCA+TGG + chr3_2:11236696-11236715 Msa0395110:intron 55.0%
! CGTCAAAGGCGTGCATGGAA+AGG + chr3_2:11236701-11236720 Msa0395110:intron 55.0%
ATCCAGGACGTACACGTCAC+TGG + chr3_2:11236728-11236747 Msa0395110:intron 55.0%
TTCCAGTGACGTGTACGTCC+TGG - chr3_2:11236733-11236752 None:intergenic 55.0%
AGGACGTACACGTCACTGGA+AGG + chr3_2:11236732-11236751 Msa0395110:intron 55.0%
AGGAGAAAACCGGCCTGGTT+TGG + chr3_2:11236792-11236811 Msa0395110:intron 55.0%
! GGTTCGGTTCATGCCAAACC+AGG - chr3_2:11236808-11236827 None:intergenic 55.0%
! ATGAACCGAACCGGTTCAGC+AGG + chr3_2:11236816-11236835 Msa0395110:intron 55.0%
ATAGGCCTGCTGAACCGGTT+CGG - chr3_2:11236824-11236843 None:intergenic 55.0%
!!! CTTCGTTTTGGTTCCGGCGT+GGG - chr3_2:11236940-11236959 None:intergenic 55.0%
!!! TCTTCGTTTTGGTTCCGGCG+TGG - chr3_2:11236941-11236960 None:intergenic 55.0%
GTGGCACCTGGACTATGACT+TGG + chr3_2:11237757-11237776 Msa0395110:intron 55.0%
CGCAAGTTCAGGAATCCAGC+TGG - chr3_2:11239033-11239052 None:intergenic 55.0%
GGATGACAAGGACGAGAGAG+AGG - chr3_2:11239817-11239836 None:intergenic 55.0%
!! GAGCTTGAGGGTGCTGTTGT+AGG + chr3_2:11240035-11240054 Msa0395110:CDS 55.0%
CTCCCGGACCTCGATTCTCA+AGG - chr3_2:11235078-11235097 None:intergenic 60.0%
! GGGCCTGGAGCGCTTTCTTT+AGG - chr3_2:11236574-11236593 None:intergenic 60.0%
GGCCTAGGACCCTTGGATCT+AGG - chr3_2:11236666-11236685 None:intergenic 60.0%
! TTACCATGCGCTGCTGGCCT+AGG - chr3_2:11236681-11236700 None:intergenic 60.0%
GATGGAGGAGAAAACCGGCC+TGG + chr3_2:11236787-11236806 Msa0395110:intron 60.0%
CGGTTCATGCCAAACCAGGC+CGG - chr3_2:11236804-11236823 None:intergenic 60.0%
ATGAGCTCTCTCTCCCACGC+CGG + chr3_2:11236924-11236943 Msa0395110:intron 60.0%
AAGAAGGCCGGAGTTCGCTC+CGG + chr3_2:11236960-11236979 Msa0395110:intron 60.0%
GAGAAAACGCTCCGGTACGG+TGG - chr3_2:11237007-11237026 None:intergenic 60.0%
AAGGACTGACACGTGGCACC+TGG + chr3_2:11237745-11237764 Msa0395110:intron 60.0%
CATCCCCACCCCAACTTCAG+CGG + chr3_2:11238976-11238995 Msa0395110:CDS 60.0%
AAGCCGCTGAAGTTGGGGTG+GGG - chr3_2:11238982-11239001 None:intergenic 60.0%
GAAGCCGCTGAAGTTGGGGT+GGG - chr3_2:11238983-11239002 None:intergenic 60.0%
TGAAGCCGCTGAAGTTGGGG+TGG - chr3_2:11238984-11239003 None:intergenic 60.0%
! TCCAAACGCCCTGGGAGCGT+TGG + chr3_2:11236618-11236637 Msa0395110:intron 65.0%
! TCCAACGCTCCCAGGGCGTT+TGG - chr3_2:11236622-11236641 None:intergenic 65.0%
! CGCTGCTGGCCTAGGACCCT+TGG - chr3_2:11236673-11236692 None:intergenic 70.0%
GGTCCTAGGCCAGCAGCGCA+TGG + chr3_2:11236675-11236694 Msa0395110:intron 70.0%
CACCGCACCGGAGCGAACTC+CGG - chr3_2:11236970-11236989 None:intergenic 70.0%
GGCCGGAGTTCGCTCCGGTG+CGG + chr3_2:11236965-11236984 Msa0395110:intron 75.0%
CGGAGTTCGCTCCGGTGCGG+TGG + chr3_2:11236968-11236987 Msa0395110:intron 75.0%
GCTCCGGTGCGGTGGTTCGC+CGG + chr3_2:11236976-11236995 Msa0395110:intron 75.0%
! CCGCCGGCGAACCACCGCAC+CGG - chr3_2:11236982-11237001 None:intergenic 80.0%
! CCGGTGCGGTGGTTCGCCGG+CGG + chr3_2:11236979-11236998 Msa0395110:intron 80.0%
! CTCCGGTACGGTGGCGCCGC+CGG - chr3_2:11236998-11237017 None:intergenic 80.0%
! CGCCGGCGGCGCCACCGTAC+CGG + chr3_2:11236993-11237012 Msa0395110:intron 85.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 11234340 11240166 11234340 ID=Msa0395110;Name=Msa0395110
chr3_2 mRNA 11234340 11240166 11234340 ID=Msa0395110-mRNA-1;Parent=Msa0395110;Name=Msa0395110-mRNA-1;_AED=0.52;_eAED=0.53;_QI=0|0|0|0.85|1|1|7|0|372
chr3_2 exon 11234340 11234345 11234340 ID=Msa0395110-mRNA-1:exon:2712;Parent=Msa0395110-mRNA-1
chr3_2 exon 11234350 11234452 11234350 ID=Msa0395110-mRNA-1:exon:2713;Parent=Msa0395110-mRNA-1
chr3_2 exon 11234555 11234757 11234555 ID=Msa0395110-mRNA-1:exon:2714;Parent=Msa0395110-mRNA-1
chr3_2 exon 11238555 11238785 11238555 ID=Msa0395110-mRNA-1:exon:2715;Parent=Msa0395110-mRNA-1
chr3_2 exon 11238837 11239074 11238837 ID=Msa0395110-mRNA-1:exon:2716;Parent=Msa0395110-mRNA-1
chr3_2 exon 11239255 11239445 11239255 ID=Msa0395110-mRNA-1:exon:2717;Parent=Msa0395110-mRNA-1
chr3_2 exon 11240020 11240166 11240020 ID=Msa0395110-mRNA-1:exon:2718;Parent=Msa0395110-mRNA-1
chr3_2 CDS 11234340 11234345 11234340 ID=Msa0395110-mRNA-1:cds;Parent=Msa0395110-mRNA-1
chr3_2 CDS 11234350 11234452 11234350 ID=Msa0395110-mRNA-1:cds;Parent=Msa0395110-mRNA-1
chr3_2 CDS 11234555 11234757 11234555 ID=Msa0395110-mRNA-1:cds;Parent=Msa0395110-mRNA-1
chr3_2 CDS 11238555 11238785 11238555 ID=Msa0395110-mRNA-1:cds;Parent=Msa0395110-mRNA-1
chr3_2 CDS 11238837 11239074 11238837 ID=Msa0395110-mRNA-1:cds;Parent=Msa0395110-mRNA-1
chr3_2 CDS 11239255 11239445 11239255 ID=Msa0395110-mRNA-1:cds;Parent=Msa0395110-mRNA-1
chr3_2 CDS 11240020 11240166 11240020 ID=Msa0395110-mRNA-1:cds;Parent=Msa0395110-mRNA-1
Gene Sequence

>Msa0395110

ATGCAACTACCTCTTGCAATTGTAGCCATCGGTGGTCTATTTTCAACAAAAGCTAAAACCGAGGCTGAATGGAAAACAGTGAGTCAAAATCTGAATCTGGAGTTGGGACAAGACTACTCCATTAATCATAAGAGATTAATTCAACAATGGGTAGCTGAAGGGTTTGTTAAAAAATTCGATGGGAGAAGAACTTTAGAGCAAGTTGGAGAGGAGAATTTGTCGGAGTTGATCCATAGAAGTTTGGTCATGGTGTCAAAAGTTGGCTTTGAAGGGAAAGTTAAAACATGTCAAGTCCATGACTTGCTGCGGGAAACACTTCCTAAATCTGTTGGTGAGCTACATAACTTAGAGTCATTGGATTTAAGAGAAACACTTGTGCATGAGATACCAAGTGAAATAAACAAGCTGGCAAAGCTGAGGAACCTTCTTGCTTACCATTGTAACTATGAAGAAATGTATTCTCTTTTGAGCTTTACAACTGGCGTGCTGATGGAAAAAGGTATTAAAAATTTGACTTCCATAGAAAATCTTTGTTATGTGGAGATAAGGAAGCTAGGTTTAACCCGTGTAAGAAGAGAGCATGGTAGTTCCTTAAGTGCTGCAATAGAAGAGATGAAACACCTTGAGAATCTTAATGTCACTACAATATCTGAGGATGAAATCATCGACTTAAACTTTACATCATCCCCACCCCAACTTCAGCGGCTTCATTTAAAAGCTAAACTACAGAAGTTGCCCAGCTGGATTCCTGAACTTGCGTGTCTAGTTAAGGTAAGGCTGGATAGTGGGACTTGTCTCTCTGTTGAACATCTTACACTAGAAAAAATCCCTCAACTGAAAGAGGTACCCTCCGGGATCAAACCCATGCATAACCTCAAAGATATTTACTTCACTGATATGCCTGCTGAATTTGTTGAAAGCATCGATCCTGACAAAGGAAAAGACTACTCGATTATCAAGCATGTTCCTCTTCTGCTTGTGAGCTTTGAGCTTGAGGGTGCTGTTGTAGGTTCACAAGGAACAAATGATGGTGTTAAGTCATGTACATGTAAGCTTGTTGATCTTTGGTGTTTTGATTTGGTACTTAGAAGCTTCAAATGGGGATTTCTTCCTGCGTGA
Protein sequence

>Msa0395110

MQLPLAIVAIGGLFSTKAKTEAEWKTVSQNLNLELGQDYSINHKRLIQQWVAEGFVKKFDGRRTLEQVGEENLSELIHRSLVMVSKVGFEGKVKTCQVHDLLRETLPKSVGELHNLESLDLRETLVHEIPSEINKLAKLRNLLAYHCNYEEMYSLLSFTTGVLMEKGIKNLTSIENLCYVEIRKLGLTRVRREHGSSLSAAIEEMKHLENLNVTTISEDEIIDLNFTSSPPQLQRLHLKAKLQKLPSWIPELACLVKVRLDSGTCLSVEHLTLEKIPQLKEVPSGIKPMHNLKDIYFTDMPAEFVESIDPDKGKDYSIIKHVPLLLVSFELEGAVVGSQGTNDGVKSCTCKLVDLWCFDLVLRSFKWGFLPA*