AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1285550


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1285550 MtrunA17_Chr7g0270811 87.179 507 22 4 8 480 1 498 0.0 826
Msa1285550 MtrunA17_Chr3g0143341 62.729 491 125 4 47 480 3 492 0.0 615
Msa1285550 MtrunA17_Chr3g0143331 56.757 444 93 7 69 459 7 404 2.12e-165 473
Msa1285550 MtrunA17_Chr3g0096421 65.714 280 84 2 213 480 9 288 8.98e-124 364
Msa1285550 MtrunA17_Chr3g0133261 37.946 448 245 6 55 475 68 509 9.56e-108 331
Msa1285550 MtrunA17_Chr3g0096431 68.027 147 47 0 42 188 4 150 1.11e-69 220
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1285550 AT3G62120.3 77.872 470 76 4 35 480 21 486 0.0 738
Msa1285550 AT3G62120.2 77.872 470 76 4 35 480 34 499 0.0 737
Msa1285550 AT3G62120.1 77.872 470 76 4 35 480 34 499 0.0 737
Msa1285550 AT5G52520.1 37.924 472 262 6 30 475 44 510 2.92e-110 338
Msa1285550 AT5G10880.1 54.737 190 68 4 309 480 89 278 5.59e-55 187

Find 119 sgRNAs with CRISPR-Local

Find 514 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCTTGGTCAATGGCTATT+TGG 0.152091 8_3:-30374285 Msa1285550:CDS
GTTTCAGGTTCTTGAGATTT+TGG 0.162156 8_3:-30372151 Msa1285550:intron
ATTGAGTACTATGATATTTC+TGG 0.186757 8_3:-30374322 Msa1285550:CDS
GTTTGTTTCTAATACTGTTC+TGG 0.275959 8_3:-30373611 Msa1285550:CDS
TAACCTGATTGTTGTGGTTT+TGG 0.279807 8_3:+30374669 None:intergenic
CTGCTTATTTGCTAAATCCT+TGG 0.291175 8_3:+30371427 None:intergenic
GCAGGAGTCGTGAGTTTCTT+TGG 0.293371 8_3:-30372530 Msa1285550:intron
AGGTGCAACTTCTCATTGTT+TGG 0.296531 8_3:-30371896 Msa1285550:CDS
TAAATCAGATTCTCCAGATT+TGG 0.310695 8_3:+30373262 None:intergenic
TGCCCTTTACCCAGGTTGCT+TGG 0.318425 8_3:-30373289 Msa1285550:intron
TGCTTATTTGCTAAATCCTT+GGG 0.321603 8_3:+30371428 None:intergenic
ACCTTGGTCAATGGCTATTT+GGG 0.328192 8_3:-30374284 Msa1285550:CDS
GGCCCGATTTCAATCCTTAG+AGG 0.334820 8_3:+30371449 None:intergenic
CGACATTGATAATGATGATT+TGG 0.336778 8_3:-30371258 Msa1285550:CDS
GCCCTTTACCCAGGTTGCTT+GGG 0.351835 8_3:-30373288 Msa1285550:intron
ACTTGAACTGAAGCTACTTT+AGG 0.353590 8_3:+30371638 None:intergenic
TACATAACAGTTTCACTAGT+TGG 0.356914 8_3:+30373218 None:intergenic
GTGTATCTATGAAGAGTATT+TGG 0.358094 8_3:-30372118 Msa1285550:CDS
GTTGCTTGGGTGACCAAATC+TGG 0.358966 8_3:-30373275 Msa1285550:CDS
GGGGTGATGGTGATGGTTCA+TGG 0.366349 8_3:-30371686 Msa1285550:CDS
CTTACTACTCTAAGTGGATA+AGG 0.369921 8_3:-30373193 Msa1285550:CDS
AAATGAAAGGTGTTCCTCTA+AGG 0.392966 8_3:-30371463 Msa1285550:intron
TTCTAATACTGTTCTGGAAA+AGG 0.393006 8_3:-30373605 Msa1285550:CDS
TGTATTCCACGACCAGTGTT+TGG 0.394220 8_3:+30371919 None:intergenic
GGTGCAACTTCTCATTGTTT+GGG 0.396799 8_3:-30371895 Msa1285550:CDS
TGGGTAATCTCCAGCTAGCT+AGG 0.408022 8_3:+30374949 None:intergenic
TTACTACTCTAAGTGGATAA+GGG 0.421374 8_3:-30373192 Msa1285550:CDS
GTTCCTCTAAGGATTGAAAT+CGG 0.427214 8_3:-30371452 Msa1285550:CDS
GCAAGGACAAAGGGTGAGAC+AGG 0.427300 8_3:-30370409 Msa1285550:CDS
GCTTACAGTTCGAGTACTAT+AGG 0.427959 8_3:+30371792 None:intergenic
CTCACTCTGTGTGTTGTGTT+GGG 0.428089 8_3:+30374930 None:intergenic
TGTAGGTGGTGGAAAGAAGA+AGG 0.433758 8_3:-30374578 Msa1285550:intron
CGTGAGTTTCTTTGGCAAGA+AGG 0.437042 8_3:-30372522 Msa1285550:CDS
AGTGGTGCAATGTTGTTAGA+TGG 0.437519 8_3:-30373139 Msa1285550:CDS
GTTGCTACATTCTCAGACCT+TGG 0.440376 8_3:-30374300 Msa1285550:CDS
TGAGTTATTTAAAAGCAGTA+AGG 0.441628 8_3:+30365936 None:intergenic
TTGGCAGTTCCTGTCGTAAA+GGG 0.443422 8_3:-30372099 Msa1285550:CDS
ACTCACTCTGTGTGTTGTGT+TGG 0.444327 8_3:+30374929 None:intergenic
ACCTTGTTGTGTTGGAAAGA+AGG 0.446489 8_3:+30374861 None:intergenic
CTAGTTGGACGAATAGCAAT+AGG 0.448569 8_3:+30373233 None:intergenic
AGTGAGCTTGAGAAGTTTGC+TGG 0.448820 8_3:-30372069 Msa1285550:CDS
TTGTCATCCTTCACAATGGC+GGG 0.450663 8_3:-30374750 Msa1285550:CDS
CTGGAGCAAAACCCTTGATA+TGG 0.451172 8_3:+30373575 None:intergenic
GGAAAGAAGGCGAGAGAGAA+TGG 0.455751 8_3:+30374874 None:intergenic
CGTGCTGTTCGTCGTGATAG+TGG 0.458000 8_3:-30371290 Msa1285550:CDS
CAATGGTCTGGCAGAACTCA+TGG 0.460207 8_3:-30371816 Msa1285550:CDS
TGAGTATCAGCATCTTTGTA+AGG 0.463332 8_3:+30371599 None:intergenic
CACCACTGATTAAGTTTCAA+AGG 0.466130 8_3:+30373155 None:intergenic
AAAAGATGATCTTAGCTCCT+TGG 0.467478 8_3:-30371109 Msa1285550:CDS
GCCAGAGACAACTATTCTCC+TGG 0.468582 8_3:-30371506 Msa1285550:CDS
CTTATCCACTTAGAGTAGTA+AGG 0.470822 8_3:+30373194 None:intergenic
CAACCAAAACCACAACAATC+AGG 0.476529 8_3:-30374672 Msa1285550:intron
AGGGAGAGAAAGCAATGGTC+TGG 0.482327 8_3:-30371828 Msa1285550:CDS
CATATTCACAGTTGCGGTAC+AGG 0.488743 8_3:+30371562 None:intergenic
CACTGAGAATATTTCCATCC+AGG 0.489221 8_3:+30371488 None:intergenic
ATTAGGTTTGACCAATAAGA+AGG 0.491019 8_3:-30374536 Msa1285550:CDS
CATTCTCAGACCTTGGTCAA+TGG 0.493545 8_3:-30374293 Msa1285550:CDS
GTCAAGAAAGAAACTAGATT+AGG 0.497958 8_3:-30374553 Msa1285550:CDS
TTTATTCCAAACACTGGTCG+TGG 0.504832 8_3:-30371925 Msa1285550:CDS
AGGCTGAAAACTTCGGAGAA+TGG 0.505638 8_3:-30374516 Msa1285550:CDS
TCCAGGAGAATAGTTGTCTC+TGG 0.507302 8_3:+30371505 None:intergenic
ACAGAGTGAGTCTCCTCTTA+CGG 0.512884 8_3:-30374917 Msa1285550:five_prime_UTR
GGGTAATCTCCAGCTAGCTA+GGG 0.515264 8_3:+30374950 None:intergenic
TGATAATGATGATTTGGTTG+AGG 0.517380 8_3:-30371252 Msa1285550:CDS
TTTGGCAGTTCCTGTCGTAA+AGG 0.519122 8_3:-30372100 Msa1285550:CDS
TTCCTCTAAGGATTGAAATC+GGG 0.521464 8_3:-30371451 Msa1285550:CDS
TATGTTAAAGCAAGGACAAA+GGG 0.521676 8_3:-30370418 Msa1285550:CDS
ATCGGTCCCCGCCATTGTGA+AGG 0.522242 8_3:+30374743 None:intergenic
GAGTTATTTAAAAGCAGTAA+GGG 0.523455 8_3:+30365937 None:intergenic
AAAGGAGAAGGACCATATCA+AGG 0.526120 8_3:-30373587 Msa1285550:CDS
AAGAGCGATGGTGCCGTAAG+AGG 0.527177 8_3:+30374904 None:intergenic
GCATTCAGATCATACATACA+TGG 0.527313 8_3:-30371160 Msa1285550:CDS
GATAAACTATGAAAATGAGA+AGG 0.535170 8_3:-30371848 Msa1285550:CDS
AACACTGGTCGTGGAATACA+AGG 0.537405 8_3:-30371916 Msa1285550:CDS
TACTGTTCTGGAAAAGGAGA+AGG 0.537973 8_3:-30373599 Msa1285550:CDS
TCAGCATCTTTGTAAGGCAC+AGG 0.554993 8_3:+30371605 None:intergenic
TGTATCCTTACTACTCTAAG+TGG 0.558724 8_3:-30373199 Msa1285550:CDS
GTTGTCTCTGGCATCTGACT+CGG 0.558998 8_3:+30371517 None:intergenic
GTGAAATAACCTGATTGTTG+TGG 0.560703 8_3:+30374663 None:intergenic
TTTACAGGTTGTTGTGAATG+GGG 0.561335 8_3:-30374350 Msa1285550:intron
AATAAGAAGGCTGAAAACTT+CGG 0.562437 8_3:-30374523 Msa1285550:CDS
ACGGTGTTACCTTGTTGTGT+TGG 0.565907 8_3:+30374853 None:intergenic
CAAGGATTTAGCAAATAAGC+AGG 0.570765 8_3:-30371426 Msa1285550:intron
TGAACTGAAGCTACTTTAGG+TGG 0.574866 8_3:+30371641 None:intergenic
ACAGATTGGGGTGATGGTGA+TGG 0.576038 8_3:-30371693 Msa1285550:intron
TGCCTTTGAAACTTAATCAG+TGG 0.577853 8_3:-30373157 Msa1285550:CDS
GCCTTCTTTCCAACACAACA+AGG 0.579588 8_3:-30374862 Msa1285550:intron
TAGGCATTTATTCCAAACAC+TGG 0.579675 8_3:-30371931 Msa1285550:CDS
CTTAGCTCCTTGGTGTGACG+AGG 0.580104 8_3:-30371099 Msa1285550:CDS
GAGACAACTATTCTCCTGGA+TGG 0.582790 8_3:-30371502 Msa1285550:CDS
AATGGTCTGGCAGAACTCAT+GGG 0.584270 8_3:-30371815 Msa1285550:CDS
CTTGTCATCCTTCACAATGG+CGG 0.585287 8_3:-30374751 Msa1285550:CDS
TACAAAGATGCTGATACTCA+AGG 0.585962 8_3:-30371596 Msa1285550:CDS
AAGGAGAAGGACCATATCAA+GGG 0.586256 8_3:-30373586 Msa1285550:CDS
TCATGGTGATGACAAGGGAT+TGG 0.590460 8_3:-30371669 Msa1285550:CDS
AGCTCCTTGGTGTGACGAGG+AGG 0.591730 8_3:-30371096 Msa1285550:intron
AAGGATTGAAATCGGGCCCA+AGG 0.596967 8_3:-30371444 Msa1285550:CDS
TACTACTCTAAGTGGATAAG+GGG 0.599458 8_3:-30373191 Msa1285550:CDS
ATAAACTATGAAAATGAGAA+GGG 0.599751 8_3:-30371847 Msa1285550:CDS
AATGGAACGTGCAAGAGCGA+TGG 0.607251 8_3:+30374892 None:intergenic
GTGGTGCAATGTTGTTAGAT+GGG 0.608044 8_3:-30373138 Msa1285550:CDS
GAGCTTGAGAAGTTTGCTGG+TGG 0.612213 8_3:-30372066 Msa1285550:CDS
CATTCAGATCATACATACAT+GGG 0.613469 8_3:-30371159 Msa1285550:CDS
ATATGTTAAAGCAAGGACAA+AGG 0.615285 8_3:-30370419 Msa1285550:CDS
CAACAACATATTCACAGTTG+CGG 0.617944 8_3:+30371556 None:intergenic
TGTCATCCTTCACAATGGCG+GGG 0.622294 8_3:-30374749 Msa1285550:CDS
ACTTTACACTACCAGTGTTG+AGG 0.626381 8_3:-30372043 Msa1285550:intron
AAAGGAGGAAGCAGATACAG+AGG 0.626885 8_3:-30372481 Msa1285550:intron
CAGTATTAGAAACAAACAGA+GGG 0.633054 8_3:+30373617 None:intergenic
TCAGACACACACCTCAACAC+TGG 0.635226 8_3:+30372032 None:intergenic
CACTATCACGACGAACAGCA+CGG 0.655477 8_3:+30371291 None:intergenic
TCCCAAATAGCCATTGACCA+AGG 0.672878 8_3:+30374283 None:intergenic
GATGGTTCATGGTGATGACA+AGG 0.675247 8_3:-30371675 Msa1285550:CDS
GTGCTTGTCATCCTTCACAA+TGG 0.678254 8_3:-30374754 Msa1285550:CDS
TGAGAAGGGAGAGAAAGCAA+TGG 0.680929 8_3:-30371833 Msa1285550:CDS
CATACCTCCTCGTCACACCA+AGG 0.697417 8_3:+30371092 None:intergenic
ACAGTATTAGAAACAAACAG+AGG 0.698430 8_3:+30373616 None:intergenic
ATGGTTCATGGTGATGACAA+GGG 0.721801 8_3:-30371674 Msa1285550:CDS
CTTCGGAGAATGGTACTCCG+AGG 0.749852 8_3:-30374506 Msa1285550:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATAAAATATAAAATATT+TGG + chr8_3:30368260-30368279 None:intergenic 0.0%
!! ATGAATAAATAAATACATTT+GGG + chr8_3:30366696-30366715 None:intergenic 10.0%
!! AATGAATAAATAAATACATT+TGG + chr8_3:30366697-30366716 None:intergenic 10.0%
!! AAAATTAAATGAGATTTATT+CGG + chr8_3:30369584-30369603 None:intergenic 10.0%
!! TTAAATAAGATATATAATTG+AGG - chr8_3:30369964-30369983 Msa1285550:intron 10.0%
!! TTTGATTAAAAGTTAATAAT+TGG - chr8_3:30371449-30371468 Msa1285550:CDS 10.0%
!! AAAAAAAAATTATATAATGC+CGG + chr8_3:30371597-30371616 None:intergenic 10.0%
!!! ATTTTATCATATATTTTTGT+AGG - chr8_3:30372106-30372125 Msa1285550:CDS 10.0%
!!! ATGATTGATATTAATTTTTT+AGG - chr8_3:30373180-30373199 Msa1285550:CDS 10.0%
!!! TGATTGATATTAATTTTTTA+GGG - chr8_3:30373181-30373200 Msa1285550:CDS 10.0%
!!! AAAATTAAGTTTTGTATTAT+TGG - chr8_3:30373285-30373304 Msa1285550:intron 10.0%
!!! AAATTAAGTTTTGTATTATT+GGG - chr8_3:30373286-30373305 Msa1285550:intron 10.0%
!!! TGACAATATTTTTTTTTTTA+AGG - chr8_3:30374545-30374564 Msa1285550:CDS 10.0%
!!! TTATTTATATATTTTTCAAC+AGG - chr8_3:30374932-30374951 Msa1285550:five_prime_UTR 10.0%
!! AATATTCACAAAAATAACTA+TGG + chr8_3:30367165-30367184 None:intergenic 15.0%
!!! CCATAAAACAAATATTTTTA+AGG + chr8_3:30367452-30367471 None:intergenic 15.0%
!!! CCTTAAAAATATTTGTTTTA+TGG - chr8_3:30367449-30367468 Msa1285550:intron 15.0%
!! CTAATTATAATAATATACAC+TGG + chr8_3:30370342-30370361 None:intergenic 15.0%
!! TGGCTATATATTTAAATTTA+CGG - chr8_3:30370405-30370424 Msa1285550:CDS 15.0%
!! ATATATTTAAATTTACGGTT+TGG - chr8_3:30370410-30370429 Msa1285550:CDS 15.0%
!!! AGTTTTACTTTGATTTTATA+CGG - chr8_3:30371216-30371235 Msa1285550:CDS 15.0%
!! AAAAAAAATTATATAATGCC+GGG + chr8_3:30371596-30371615 None:intergenic 15.0%
!!! ATATTTTTTTCCAAAATGTA+TGG - chr8_3:30371627-30371646 Msa1285550:CDS 15.0%
!!! ACGAAGTATATTTTTTTTTA+AGG - chr8_3:30371676-30371695 Msa1285550:CDS 15.0%
!! AATATGAATGAATATTTGTA+TGG - chr8_3:30371871-30371890 Msa1285550:CDS 15.0%
!! ATATGAATGAATATTTGTAT+GGG - chr8_3:30371872-30371891 Msa1285550:CDS 15.0%
!! AGTATATCTCATAAATATTT+AGG + chr8_3:30371994-30372013 None:intergenic 15.0%
!! TATTGTGATAAATAAATTGT+TGG + chr8_3:30372315-30372334 None:intergenic 15.0%
!!! AATTCACAATTTTTTTTAAG+AGG - chr8_3:30372348-30372367 Msa1285550:intron 15.0%
!!! AATTATTTAAGTTTTTTTCG+CGG - chr8_3:30372405-30372424 Msa1285550:intron 15.0%
!! TTACTTGATTTATTATCATT+TGG - chr8_3:30372479-30372498 Msa1285550:intron 15.0%
!!! TTTTTTTTTTAAGGATCATT+AGG - chr8_3:30372515-30372534 Msa1285550:CDS 15.0%
!! CAATTTATTCGATTTAAATA+AGG + chr8_3:30372572-30372591 None:intergenic 15.0%
!! CTTATTTAAATCGAATAAAT+TGG - chr8_3:30372570-30372589 Msa1285550:intron 15.0%
!! TGAAAAGAATAGAAAAATAA+GGG + chr8_3:30374299-30374318 None:intergenic 15.0%
!! TTGAAAAGAATAGAAAAATA+AGG + chr8_3:30374300-30374319 None:intergenic 15.0%
!! TTTATGAATGAATTGAGAAA+CGG + chr8_3:30366072-30366091 None:intergenic 20.0%
!!! TTTTACTATGTTATCTCAAT+TGG - chr8_3:30366933-30366952 Msa1285550:intron 20.0%
!!! TATTTTAAAAACAAATGTGC+AGG - chr8_3:30367214-30367233 Msa1285550:intron 20.0%
!!! ATCTTCATTTTCTTTATTTC+TGG + chr8_3:30367251-30367270 None:intergenic 20.0%
!!! ATAATTTTAATATCAGTGCT+AGG - chr8_3:30367918-30367937 Msa1285550:intron 20.0%
!! TTCATGAAATAACTATTTGA+TGG + chr8_3:30368452-30368471 None:intergenic 20.0%
!! TTAGAAAAATGTACTTTCAA+AGG + chr8_3:30368714-30368733 None:intergenic 20.0%
!! TTCTAAACTATAATTGTTTC+AGG - chr8_3:30368737-30368756 Msa1285550:intron 20.0%
!!! TTGAGATTTTGGAATTATAT+CGG - chr8_3:30368763-30368782 Msa1285550:intron 20.0%
!! ATAAACTATGAAAATGAGAA+GGG - chr8_3:30369056-30369075 Msa1285550:intron 20.0%
!! ATGACTAAAAAAACAAAACT+TGG + chr8_3:30369892-30369911 None:intergenic 20.0%
!!! TTTTAGTCATTTCATTGTTT+TGG - chr8_3:30369902-30369921 Msa1285550:intron 20.0%
!! ATATCAAAATATTACGCATA+CGG + chr8_3:30370375-30370394 None:intergenic 20.0%
!!! AAAAGTTAATAATTGGCTTT+TGG - chr8_3:30371456-30371475 Msa1285550:CDS 20.0%
!!! AGTATAAAATTATTTTACCC+CGG - chr8_3:30371575-30371594 Msa1285550:CDS 20.0%
!! AAAAAAATTATATAATGCCG+GGG + chr8_3:30371595-30371614 None:intergenic 20.0%
!! TTCTTACGAATTGAAATTTA+TGG + chr8_3:30371833-30371852 None:intergenic 20.0%
!! AAATTGTTGGAATAATTGTT+TGG + chr8_3:30372302-30372321 None:intergenic 20.0%
!!! ATTATTTAAGTTTTTTTCGC+GGG - chr8_3:30372406-30372425 Msa1285550:intron 20.0%
!! TTGATTTATTATCATTTGGT+AGG - chr8_3:30372483-30372502 Msa1285550:CDS 20.0%
!!! TTTTTTTAATGACATGGATT+TGG + chr8_3:30372742-30372761 None:intergenic 20.0%
!!! ACTCATTTTTTTTAATGACA+TGG + chr8_3:30372748-30372767 None:intergenic 20.0%
!!! AGTTTTTTTTTTAATCACAG+CGG + chr8_3:30372861-30372880 None:intergenic 20.0%
!!! CTTTATTTCAGTAATTGATT+TGG - chr8_3:30373004-30373023 Msa1285550:intron 20.0%
!!! TATTTTTTTCCTTCTGTAAA+AGG - chr8_3:30373151-30373170 Msa1285550:CDS 20.0%
!!! GGGTTTTAATAAAATTGTAA+TGG - chr8_3:30373306-30373325 Msa1285550:intron 20.0%
!!! TTTATTACTTTTGTACCTAA+TGG - chr8_3:30373439-30373458 Msa1285550:intron 20.0%
!! TAATAATCACTTCATATTGA+GGG + chr8_3:30374002-30374021 None:intergenic 20.0%
!! TAAACATGACAACAAATAAT+AGG + chr8_3:30374259-30374278 None:intergenic 20.0%
!!! TATTATTTGTTGTCATGTTT+AGG - chr8_3:30374258-30374277 Msa1285550:intron 20.0%
!!! TATCTTTTTTTCAAATTCTC+AGG - chr8_3:30374440-30374459 Msa1285550:intron 20.0%
!!! TGGTTGTTTTGGTTTTTTTT+GGG + chr8_3:30366217-30366236 None:intergenic 25.0%
!!! TTGGTTGTTTTGGTTTTTTT+TGG + chr8_3:30366218-30366237 None:intergenic 25.0%
! AATTCAATTGAATTGTACCT+CGG + chr8_3:30366417-30366436 None:intergenic 25.0%
!!! TTTTCACCTGATTTGTTTTT+AGG - chr8_3:30366446-30366465 Msa1285550:intron 25.0%
!!! TTTTCATTTTTGACTAGTGT+AGG - chr8_3:30366494-30366513 Msa1285550:intron 25.0%
!!! TTGATTTGGATTGATTTTAC+AGG - chr8_3:30366538-30366557 Msa1285550:intron 25.0%
! ATTGAGTACTATGATATTTC+TGG - chr8_3:30366581-30366600 Msa1285550:intron 25.0%
! TTAGTTGTTGATCTATACTA+AGG - chr8_3:30366715-30366734 Msa1285550:intron 25.0%
! AGAAAAAATTGTGCTATAAC+TGG + chr8_3:30366809-30366828 None:intergenic 25.0%
!!! TGGTTGTGTTTTTAGAATAA+AGG - chr8_3:30367389-30367408 Msa1285550:intron 25.0%
! AAAAAATAATGCCTGATGAA+TGG + chr8_3:30367808-30367827 None:intergenic 25.0%
!!! AAATTTGCTATAACAGAGAA+AGG + chr8_3:30367849-30367868 None:intergenic 25.0%
! AAGAAATTGAGAGTTGAAAA+GGG + chr8_3:30367960-30367979 None:intergenic 25.0%
! TAAGAAATTGAGAGTTGAAA+AGG + chr8_3:30367961-30367980 None:intergenic 25.0%
! TTCAACTCTCAATTTCTTAT+TGG - chr8_3:30367962-30367981 Msa1285550:intron 25.0%
! TCAACTCTCAATTTCTTATT+GGG - chr8_3:30367963-30367982 Msa1285550:intron 25.0%
! TTATTGGGTGAAATTCATTT+GGG + chr8_3:30368048-30368067 None:intergenic 25.0%
!!! CTTATACCAATTTTAATTGC+AGG - chr8_3:30368355-30368374 Msa1285550:intron 25.0%
!! ACTGCATTAATTTTCATCTT+TGG - chr8_3:30368503-30368522 Msa1285550:intron 25.0%
!! TTTTGATGTAAATTCTTCCT+AGG - chr8_3:30368953-30368972 Msa1285550:intron 25.0%
! GATAAACTATGAAAATGAGA+AGG - chr8_3:30369055-30369074 Msa1285550:intron 25.0%
!!! AATCTCATTTAATTTTGCAC+AGG - chr8_3:30369588-30369607 Msa1285550:intron 25.0%
! CTATCTTAAAATCTGGATTA+TGG + chr8_3:30369861-30369880 None:intergenic 25.0%
! AAGCATACTATCTTAAAATC+TGG + chr8_3:30369868-30369887 None:intergenic 25.0%
!!! GCGTTGTTTTTTTATTTAAC+TGG + chr8_3:30370146-30370165 None:intergenic 25.0%
! CAAGTTCATAATAAAACTGA+AGG - chr8_3:30370254-30370273 Msa1285550:intron 25.0%
! AATAATATACACTGGACAAT+CGG + chr8_3:30370334-30370353 None:intergenic 25.0%
!! TTTTCTTGGTAAACTGTTAT+TGG - chr8_3:30370435-30370454 Msa1285550:intron 25.0%
!!! TTATTGGTTTATAATGCTTC+AGG - chr8_3:30370451-30370470 Msa1285550:intron 25.0%
! TGGAAAAATATGTTAAAGCA+AGG - chr8_3:30370477-30370496 Msa1285550:intron 25.0%
!! ACTCTTATTACCATACATTT+TGG + chr8_3:30371640-30371659 None:intergenic 25.0%
!!! ATATTTTTGTAGGCATTATG+CGG - chr8_3:30372116-30372135 Msa1285550:CDS 25.0%
! TATTTGTGTATTCAATTCAC+TGG + chr8_3:30372385-30372404 None:intergenic 25.0%
!!! TTATTTAAGTTTTTTTCGCG+GGG - chr8_3:30372407-30372426 Msa1285550:intron 25.0%
!!! TTTTTTAAGGATCATTAGGT+AGG - chr8_3:30372519-30372538 Msa1285550:CDS 25.0%
! ATTAATAAAAAGTTGCCAAC+AGG + chr8_3:30372708-30372727 None:intergenic 25.0%
! AGTCAATTTGAAGAAACAAA+AGG + chr8_3:30373057-30373076 None:intergenic 25.0%
! AAGCAAACAACATAAAGAAA+GGG + chr8_3:30373081-30373100 None:intergenic 25.0%
!! CATTATTAACCTTTTACAGA+AGG + chr8_3:30373163-30373182 None:intergenic 25.0%
! TTCTTAAAACCAGATATCTA+TGG + chr8_3:30373228-30373247 None:intergenic 25.0%
! TACCAATACATATGTACAAA+TGG + chr8_3:30373364-30373383 None:intergenic 25.0%
!! ATAATTTCTAGATCACCATT+AGG + chr8_3:30373457-30373476 None:intergenic 25.0%
! ATAATCACACAAATTCAACA+AGG + chr8_3:30373748-30373767 None:intergenic 25.0%
! CTAATAATCACTTCATATTG+AGG + chr8_3:30374003-30374022 None:intergenic 25.0%
! TAATATGCATCCATATAGTT+AGG - chr8_3:30374057-30374076 Msa1285550:intron 25.0%
! AATTGTTTGTTCACTTTGAT+AGG - chr8_3:30374097-30374116 Msa1285550:intron 25.0%
! AATGTGCTAATGCAATAAAT+TGG + chr8_3:30374198-30374217 None:intergenic 25.0%
! ACAATGAATTCGACTAAAAA+GGG + chr8_3:30374227-30374246 None:intergenic 25.0%
! TACAATGAATTCGACTAAAA+AGG + chr8_3:30374228-30374247 None:intergenic 25.0%
! ATGACAACAAATAATAGGAT+CGG + chr8_3:30374254-30374273 None:intergenic 25.0%
!!! TTGGATTTAGAGTTATCTTT+TGG - chr8_3:30374791-30374810 Msa1285550:intron 25.0%
!!! TGGATTTAGAGTTATCTTTT+GGG - chr8_3:30374792-30374811 Msa1285550:intron 25.0%
! GAAATTATGAAGAGATTATG+TGG - chr8_3:30374842-30374861 Msa1285550:intron 25.0%
!! TTGTTGTGTTTTGTTGTCAT+CGG + chr8_3:30366181-30366200 None:intergenic 30.0%
!!! GGTTGTTTTGGTTTTTTTTG+GGG + chr8_3:30366216-30366235 None:intergenic 30.0%
CATTCCACGTTTCAATTTAA+CGG - chr8_3:30366290-30366309 Msa1285550:intron 30.0%
GTCAAGAAAGAAACTAGATT+AGG - chr8_3:30366350-30366369 Msa1285550:intron 30.0%
ATTAGGTTTGACCAATAAGA+AGG - chr8_3:30366367-30366386 Msa1285550:intron 30.0%
AATAAGAAGGCTGAAAACTT+CGG - chr8_3:30366380-30366399 Msa1285550:intron 30.0%
GTTTGACCTAAAAACAAATC+AGG + chr8_3:30366455-30366474 None:intergenic 30.0%
! TTAGGTCAAACTTGTTTATC+TGG - chr8_3:30366464-30366483 Msa1285550:intron 30.0%
!! CTGTGTTTGACTTTTTGATT+TGG - chr8_3:30366524-30366543 Msa1285550:intron 30.0%
! ATTTTACAGGTTGTTGTGAA+TGG - chr8_3:30366551-30366570 Msa1285550:intron 30.0%
! TTTTACAGGTTGTTGTGAAT+GGG - chr8_3:30366552-30366571 Msa1285550:intron 30.0%
TGTTGATCTATACTAAGGTT+CGG - chr8_3:30366720-30366739 Msa1285550:intron 30.0%
!! AAAACCAATTTTCGAGCTTA+CGG - chr8_3:30366749-30366768 Msa1285550:intron 30.0%
!!! CTGGTCTATTTTAGTCATAA+GGG + chr8_3:30366790-30366809 None:intergenic 30.0%
!!! ACTGGTCTATTTTAGTCATA+AGG + chr8_3:30366791-30366810 None:intergenic 30.0%
CAGTATTAGAAACAAACAGA+GGG + chr8_3:30367289-30367308 None:intergenic 30.0%
ACAGTATTAGAAACAAACAG+AGG + chr8_3:30367290-30367309 None:intergenic 30.0%
!! GTTTGTTTCTAATACTGTTC+TGG - chr8_3:30367292-30367311 Msa1285550:intron 30.0%
!! TTCTAATACTGTTCTGGAAA+AGG - chr8_3:30367298-30367317 Msa1285550:intron 30.0%
TAAATAGTCACAGCAAAATC+AGG + chr8_3:30367554-30367573 None:intergenic 30.0%
TAAATCAGATTCTCCAGATT+TGG + chr8_3:30367644-30367663 None:intergenic 30.0%
TACATAACAGTTTCACTAGT+TGG + chr8_3:30367688-30367707 None:intergenic 30.0%
TTACTACTCTAAGTGGATAA+GGG - chr8_3:30367711-30367730 Msa1285550:intron 30.0%
CTCTGTTATAGCAAATTTGT+TGG - chr8_3:30367851-30367870 Msa1285550:intron 30.0%
GAAATAGACACTACATAAAG+TGG + chr8_3:30368010-30368029 None:intergenic 30.0%
TAGTGTCTATTTCGTGATTA+TGG - chr8_3:30368017-30368036 Msa1285550:intron 30.0%
CTTATTGGGTGAAATTCATT+TGG + chr8_3:30368049-30368068 None:intergenic 30.0%
ACAATGCTGAATGTTAAAAG+AGG + chr8_3:30368119-30368138 None:intergenic 30.0%
TCATGCACATTTACTTCATA+TGG - chr8_3:30368305-30368324 Msa1285550:intron 30.0%
!! GTGTATCTATGAAGAGTATT+TGG - chr8_3:30368785-30368804 Msa1285550:intron 30.0%
TGATACAGAAAACTTGACAA+TGG + chr8_3:30368910-30368929 None:intergenic 30.0%
! TGCTTATTTGCTAAATCCTT+GGG + chr8_3:30369478-30369497 None:intergenic 30.0%
TTTCTGCAAATTAGTGCAAT+AGG + chr8_3:30369516-30369535 None:intergenic 30.0%
!! CGACATTGATAATGATGATT+TGG - chr8_3:30369645-30369664 Msa1285550:intron 30.0%
!! TGATAATGATGATTTGGTTG+AGG - chr8_3:30369651-30369670 Msa1285550:intron 30.0%
CATTCAGATCATACATACAT+GGG - chr8_3:30369744-30369763 Msa1285550:intron 30.0%
AAAAAAACAACGCATGTGAT+TGG - chr8_3:30370153-30370172 Msa1285550:intron 30.0%
TGGACTAATCGGATTTATAT+TGG - chr8_3:30370173-30370192 Msa1285550:intron 30.0%
!! ATTTTGATATGTCTGCTCAT+TGG - chr8_3:30370385-30370404 Msa1285550:intron 30.0%
ATATGTTAAAGCAAGGACAA+AGG - chr8_3:30370484-30370503 Msa1285550:intron 30.0%
TATGTTAAAGCAAGGACAAA+GGG - chr8_3:30370485-30370504 Msa1285550:intron 30.0%
TTGAACAATGCTTATACCTT+CGG + chr8_3:30370564-30370583 None:intergenic 30.0%
AATTAACCATAGTATAGAGC+AGG + chr8_3:30370924-30370943 None:intergenic 30.0%
AAGTTACTAGATCTTGATTG+TGG - chr8_3:30371088-30371107 Msa1285550:intron 30.0%
TTGTTCAATTTCCATTCCAT+TGG + chr8_3:30371341-30371360 None:intergenic 30.0%
! CAGTTCTCTTTTGTAACATT+TGG + chr8_3:30371383-30371402 None:intergenic 30.0%
!!! AGTTTTATACTTTAGAGCTC+TGG - chr8_3:30371487-30371506 Msa1285550:intron 30.0%
!!! GTTTTATACTTTAGAGCTCT+GGG - chr8_3:30371488-30371507 Msa1285550:intron 30.0%
! ACCTTGGTTCTTAAATATAG+TGG - chr8_3:30371772-30371791 Msa1285550:intron 30.0%
ACCACTATATTTAAGAACCA+AGG + chr8_3:30371776-30371795 None:intergenic 30.0%
!! TTCATCCTTTACGTTTTTAG+CGG - chr8_3:30372180-30372199 Msa1285550:intron 30.0%
CGATATTATGTTCTTACTGT+CGG - chr8_3:30372431-30372450 Msa1285550:intron 30.0%
GATATTATGTTCTTACTGTC+GGG - chr8_3:30372432-30372451 Msa1285550:intron 30.0%
GTATTTGACAAAGCATGAAA+TGG - chr8_3:30372543-30372562 Msa1285550:intron 30.0%
AACATATTTGTGTAGCATCA+TGG + chr8_3:30372615-30372634 None:intergenic 30.0%
ATATAACCACGAGTAATGAT+AGG - chr8_3:30372645-30372664 Msa1285550:intron 30.0%
GAAGCAAACAACATAAAGAA+AGG + chr8_3:30373082-30373101 None:intergenic 30.0%
TTCCAATCAGTATATGGATT+TGG - chr8_3:30373099-30373118 Msa1285550:intron 30.0%
TCCAATCAGTATATGGATTT+GGG - chr8_3:30373100-30373119 Msa1285550:intron 30.0%
TAGATTACACCATAGATATC+TGG - chr8_3:30373216-30373235 Msa1285550:CDS 30.0%
GTCCATTTGTACATATGTAT+TGG - chr8_3:30373359-30373378 Msa1285550:intron 30.0%
TGGTTTATCTTATGAGGATA+CGG - chr8_3:30373643-30373662 Msa1285550:CDS 30.0%
TTGCTTCTGTTGTATAATGA+AGG - chr8_3:30373886-30373905 Msa1285550:intron 30.0%
TGTATTGCATCCTAACTATA+TGG + chr8_3:30374070-30374089 None:intergenic 30.0%
AGGTTAAGCAATACGTTTAT+AGG - chr8_3:30374117-30374136 Msa1285550:intron 30.0%
TAGTGGCTATAGAACTAAAT+TGG - chr8_3:30374143-30374162 Msa1285550:intron 30.0%
AGTGGCTATAGAACTAAATT+GGG - chr8_3:30374144-30374163 Msa1285550:intron 30.0%
GACTAGAAAAAGACTAATCT+CGG + chr8_3:30374176-30374195 None:intergenic 30.0%
!! TATTTGTTGTCATGTTTAGG+TGG - chr8_3:30374261-30374280 Msa1285550:intron 30.0%
!! ATTTGTTGTCATGTTTAGGT+GGG - chr8_3:30374262-30374281 Msa1285550:intron 30.0%
AAATTTCATCTCGATACTCT+TGG + chr8_3:30374470-30374489 None:intergenic 30.0%
AAAGAGTTAAATTATGTGCG+CGG - chr8_3:30374646-30374665 Msa1285550:intron 30.0%
! TTTGGATTTAGAGTTATCAG+AGG - chr8_3:30374726-30374745 Msa1285550:CDS 30.0%
CTTCTTCTTCAATTCCTCAT+CGG - chr8_3:30366100-30366119 Msa1285550:intron 35.0%
! GGTAACATTCTGTTTCTCAT+CGG - chr8_3:30366121-30366140 Msa1285550:intron 35.0%
!!! TTTTTTTTGGGGTTTTGCAG+CGG + chr8_3:30366205-30366224 None:intergenic 35.0%
!!! TGTTGTGGTTTTGGTTGTTT+TGG + chr8_3:30366228-30366247 None:intergenic 35.0%
! TAACCTGATTGTTGTGGTTT+TGG + chr8_3:30366237-30366256 None:intergenic 35.0%
GTGAAATAACCTGATTGTTG+TGG + chr8_3:30366243-30366262 None:intergenic 35.0%
AAAGAACGTGTAGGAAGATT+GGG + chr8_3:30366269-30366288 None:intergenic 35.0%
TAAAGAACGTGTAGGAAGAT+TGG + chr8_3:30366270-30366289 None:intergenic 35.0%
!!! AACGGCCAAAACTTTTTTGT+AGG - chr8_3:30366308-30366327 Msa1285550:intron 35.0%
! CACCACCTACAAAAAAGTTT+TGG + chr8_3:30366316-30366335 None:intergenic 35.0%
!!! CAAAACTTTTTTGTAGGTGG+TGG - chr8_3:30366314-30366333 Msa1285550:intron 35.0%
! GAAGTTTTCAGCCTTCTTAT+TGG + chr8_3:30366381-30366400 None:intergenic 35.0%
TTTACAGGTTGTTGTGAATG+GGG - chr8_3:30366553-30366572 Msa1285550:intron 35.0%
! ATCTATACTAAGGTTCGGTT+TGG - chr8_3:30366725-30366744 Msa1285550:intron 35.0%
!! TAAGAAGCGTTTGAGCTTAT+AGG - chr8_3:30366882-30366901 Msa1285550:intron 35.0%
CTAACTGATAGCAGATAAAC+CGG + chr8_3:30367075-30367094 None:intergenic 35.0%
TGTAGATTGTTCAACGAGTT+TGG - chr8_3:30367369-30367388 Msa1285550:intron 35.0%
TGTATCCTTACTACTCTAAG+TGG - chr8_3:30367704-30367723 Msa1285550:intron 35.0%
CTTATCCACTTAGAGTAGTA+AGG + chr8_3:30367712-30367731 None:intergenic 35.0%
CTTACTACTCTAAGTGGATA+AGG - chr8_3:30367710-30367729 Msa1285550:intron 35.0%
TACTACTCTAAGTGGATAAG+GGG - chr8_3:30367712-30367731 Msa1285550:intron 35.0%
!! TGCCTTTGAAACTTAATCAG+TGG - chr8_3:30367746-30367765 Msa1285550:intron 35.0%
! CACCACTGATTAAGTTTCAA+AGG + chr8_3:30367751-30367770 None:intergenic 35.0%
! AGAAAGGAAAGCATGGTTAA+AGG + chr8_3:30367833-30367852 None:intergenic 35.0%
ATAACAGAGAAAGGAAAGCA+TGG + chr8_3:30367840-30367859 None:intergenic 35.0%
!! TATAGCAAATTTGTTGGCTG+TGG - chr8_3:30367857-30367876 Msa1285550:intron 35.0%
TCTTATTGGGTGAAATCATG+TGG - chr8_3:30367976-30367995 Msa1285550:intron 35.0%
CATCACCAGATGATTCATAA+AGG + chr8_3:30368180-30368199 None:intergenic 35.0%
ACTTGTGTCTAATCCATTTC+AGG - chr8_3:30368329-30368348 Msa1285550:intron 35.0%
CTTGTGTCTAATCCATTTCA+GGG - chr8_3:30368330-30368349 Msa1285550:intron 35.0%
TTGGTATAAGTACCCTGAAA+TGG + chr8_3:30368345-30368364 None:intergenic 35.0%
ACGACTCCTGCAATTAAAAT+TGG + chr8_3:30368364-30368383 None:intergenic 35.0%
GATAGAAAATCTGTGAGTGT+GGG + chr8_3:30368692-30368711 None:intergenic 35.0%
!!! GTTTCAGGTTCTTGAGATTT+TGG - chr8_3:30368752-30368771 Msa1285550:intron 35.0%
! AGTGTTTGGAATAAATGCCT+AGG + chr8_3:30368973-30368992 None:intergenic 35.0%
TAGGCATTTATTCCAAACAC+TGG - chr8_3:30368972-30368991 Msa1285550:intron 35.0%
!!! TTTGCGCTTTTTCAACAGAT+TGG - chr8_3:30369196-30369215 Msa1285550:intron 35.0%
!!! TTGCGCTTTTTCAACAGATT+GGG - chr8_3:30369197-30369216 Msa1285550:intron 35.0%
! ACTTGAACTGAAGCTACTTT+AGG + chr8_3:30369268-30369287 None:intergenic 35.0%
TGAGTATCAGCATCTTTGTA+AGG + chr8_3:30369307-30369326 None:intergenic 35.0%
TACAAAGATGCTGATACTCA+AGG - chr8_3:30369307-30369326 Msa1285550:intron 35.0%
CAACAACATATTCACAGTTG+CGG + chr8_3:30369350-30369369 None:intergenic 35.0%
TGGATGGAAATATTCTCAGT+GGG - chr8_3:30369417-30369436 Msa1285550:intron 35.0%
TATTCTCAGTGGGAAATGAA+AGG - chr8_3:30369427-30369446 Msa1285550:intron 35.0%
!! AAATGAAAGGTGTTCCTCTA+AGG - chr8_3:30369440-30369459 Msa1285550:intron 35.0%
! GTTCCTCTAAGGATTGAAAT+CGG - chr8_3:30369451-30369470 Msa1285550:intron 35.0%
! TTCCTCTAAGGATTGAAATC+GGG - chr8_3:30369452-30369471 Msa1285550:intron 35.0%
! CTGCTTATTTGCTAAATCCT+TGG + chr8_3:30369479-30369498 None:intergenic 35.0%
CAAGGATTTAGCAAATAAGC+AGG - chr8_3:30369477-30369496 Msa1285550:intron 35.0%
GCATTCAGATCATACATACA+TGG - chr8_3:30369743-30369762 Msa1285550:intron 35.0%
AAAAGATGATCTTAGCTCCT+TGG - chr8_3:30369794-30369813 Msa1285550:intron 35.0%
ATTTAACCTCAATCAGAGTG+TGG + chr8_3:30369950-30369969 None:intergenic 35.0%
AAAGGGTTTACTTACCAACT+GGG + chr8_3:30370068-30370087 None:intergenic 35.0%
CAGGCGTTTAGAAATAGAAA+GGG + chr8_3:30370085-30370104 None:intergenic 35.0%
ACAGGCGTTTAGAAATAGAA+AGG + chr8_3:30370086-30370105 None:intergenic 35.0%
!!! TTTACGGTTTGGTGTTTTCT+TGG - chr8_3:30370421-30370440 Msa1285550:CDS 35.0%
TTGGTTTATAATGCTTCAGG+AGG - chr8_3:30370454-30370473 Msa1285550:intron 35.0%
TGAACAATGCTTATACCTTC+GGG + chr8_3:30370563-30370582 None:intergenic 35.0%
! AGGTATAAGCATTGTTCAAG+TGG - chr8_3:30370565-30370584 Msa1285550:intron 35.0%
ATACCAAACATGCGCTTAAT+AGG - chr8_3:30370822-30370841 Msa1285550:intron 35.0%
CTCCATATTCATACAAGTGA+CGG - chr8_3:30370862-30370881 Msa1285550:intron 35.0%
AACCGTCACTTGTATGAATA+TGG + chr8_3:30370867-30370886 None:intergenic 35.0%
TATGAACCTGCTCTATACTA+TGG - chr8_3:30370915-30370934 Msa1285550:intron 35.0%
GAAGCTAGTTCACCATTTAA+TGG - chr8_3:30371118-30371137 Msa1285550:CDS 35.0%
GTAATCCACAAATTCAGTGA+AGG + chr8_3:30371146-30371165 None:intergenic 35.0%
GGCATAGTATTCAATTGATC+AGG + chr8_3:30371285-30371304 None:intergenic 35.0%
ATAAACAAGCTGTGGTCAAA+AGG + chr8_3:30371306-30371325 None:intergenic 35.0%
! TTATGTCGATTGAAAGCCAA+TGG - chr8_3:30371322-30371341 Msa1285550:intron 35.0%
AATTGAACAATCCAATCCTC+TGG - chr8_3:30371351-30371370 Msa1285550:intron 35.0%
! AGAACTGCGTCTTTTCTTTT+TGG - chr8_3:30371396-30371415 Msa1285550:intron 35.0%
TGTATTATCCTGTGTAACCT+TGG - chr8_3:30371756-30371775 Msa1285550:intron 35.0%
TTTAAGAACCAAGGTTACAC+AGG + chr8_3:30371767-30371786 None:intergenic 35.0%
TTTATGGATGCTTCACTCAA+TGG + chr8_3:30371817-30371836 None:intergenic 35.0%
!! TCAATTCACTGGTCTTAGTT+TGG + chr8_3:30372374-30372393 None:intergenic 35.0%
AATGATAGGTATACCACCAT+AGG - chr8_3:30372659-30372678 Msa1285550:intron 35.0%
TAAAAAGTTGCCAACAGGAA+GGG + chr8_3:30372703-30372722 None:intergenic 35.0%
ATAAAAAGTTGCCAACAGGA+AGG + chr8_3:30372704-30372723 None:intergenic 35.0%
AGAGAACTTACTGAAACACA+AGG + chr8_3:30372984-30373003 None:intergenic 35.0%
GTTTGCTTCCAATCAGTATA+TGG - chr8_3:30373093-30373112 Msa1285550:intron 35.0%
TCCCAAATCCATATACTGAT+TGG + chr8_3:30373104-30373123 None:intergenic 35.0%
!! GTACAAATGGACTCAAGTTT+TGG + chr8_3:30373351-30373370 None:intergenic 35.0%
ACCTTAAACCCTATACATTG+CGG - chr8_3:30373544-30373563 Msa1285550:intron 35.0%
GATAAACCAGCAACAATCAT+AGG + chr8_3:30373632-30373651 None:intergenic 35.0%
!! TGTTGCTGGTTTATCTTATG+AGG - chr8_3:30373637-30373656 Msa1285550:CDS 35.0%
GGTTTATCTTATGAGGATAC+GGG - chr8_3:30373644-30373663 Msa1285550:CDS 35.0%
CGCTGAAGTTAAATATTCTG+AGG - chr8_3:30373703-30373722 Msa1285550:intron 35.0%
ATCAACCTCAGTTATGTGTA+AGG - chr8_3:30373934-30373953 Msa1285550:intron 35.0%
TCAACCTCAGTTATGTGTAA+GGG - chr8_3:30373935-30373954 Msa1285550:intron 35.0%
TGCTTACAAACACACCATAA+TGG + chr8_3:30373973-30373992 None:intergenic 35.0%
AATACGTTTATAGGTGCTAG+TGG - chr8_3:30374126-30374145 Msa1285550:intron 35.0%
! TTTGTTGTCATGTTTAGGTG+GGG - chr8_3:30374263-30374282 Msa1285550:intron 35.0%
GTAACTCTTAATGTGCTTCA+AGG + chr8_3:30374367-30374386 None:intergenic 35.0%
! AACTCTTTTTGCCCATTAAC+AGG + chr8_3:30374634-30374653 None:intergenic 35.0%
AAGAGTTAAATTATGTGCGC+GGG - chr8_3:30374647-30374666 Msa1285550:intron 35.0%
TGGCAGAGTTATTTGTGATT+TGG - chr8_3:30374708-30374727 Msa1285550:CDS 35.0%
AGCCTTGCAGAGTTAAATTT+CGG - chr8_3:30374752-30374771 Msa1285550:CDS 35.0%
AATCAAAAACCCTAGCTAGC+TGG - chr8_3:30365944-30365963 Msa1285550:CDS 40.0%
! ACCTTGTTGTGTTGGAAAGA+AGG + chr8_3:30366045-30366064 None:intergenic 40.0%
GAAACAGAATGTTACCGATG+AGG + chr8_3:30366117-30366136 None:intergenic 40.0%
CAACCAAAACCACAACAATC+AGG - chr8_3:30366231-30366250 Msa1285550:intron 40.0%
GTGGAATGTAAAGAACGTGT+AGG + chr8_3:30366278-30366297 None:intergenic 40.0%
TTGGCCGTTAAATTGAAACG+TGG + chr8_3:30366297-30366316 None:intergenic 40.0%
!!! GGCCAAAACTTTTTTGTAGG+TGG - chr8_3:30366311-30366330 Msa1285550:intron 40.0%
ACCTTGGTCAATGGCTATTT+GGG - chr8_3:30366619-30366638 Msa1285550:intron 40.0%
GATAAACCGGCTGATATTAG+CGG + chr8_3:30367062-30367081 None:intergenic 40.0%
ATCCATGTCTGACTAAGCTT+AGG + chr8_3:30367133-30367152 None:intergenic 40.0%
!! TACTGTTCTGGAAAAGGAGA+AGG - chr8_3:30367304-30367323 Msa1285550:intron 40.0%
AAAGGAGAAGGACCATATCA+AGG - chr8_3:30367316-30367335 Msa1285550:intron 40.0%
AAGGAGAAGGACCATATCAA+GGG - chr8_3:30367317-30367336 Msa1285550:intron 40.0%
ATTTAAGTGACTCTCACCTC+TGG + chr8_3:30367350-30367369 None:intergenic 40.0%
! AAATGTTTTGCCCTTTACCC+AGG - chr8_3:30367606-30367625 Msa1285550:intron 40.0%
CTAGTTGGACGAATAGCAAT+AGG + chr8_3:30367673-30367692 None:intergenic 40.0%
AGTGGTGCAATGTTGTTAGA+TGG - chr8_3:30367764-30367783 Msa1285550:intron 40.0%
GTGGTGCAATGTTGTTAGAT+GGG - chr8_3:30367765-30367784 Msa1285550:intron 40.0%
TAATGCCTGATGAATGGTGT+GGG + chr8_3:30367802-30367821 None:intergenic 40.0%
ATAATGCCTGATGAATGGTG+TGG + chr8_3:30367803-30367822 None:intergenic 40.0%
TCAACACTCGCACTCTTATT+GGG + chr8_3:30368063-30368082 None:intergenic 40.0%
TTCAACACTCGCACTCTTAT+TGG + chr8_3:30368064-30368083 None:intergenic 40.0%
CGCTTCCTTTATGAATCATC+TGG - chr8_3:30368172-30368191 Msa1285550:intron 40.0%
! TGGTGATGATTCCAGTGAAT+TGG - chr8_3:30368192-30368211 Msa1285550:intron 40.0%
TTTCTTGCAAAGCAGCTTCA+CGG + chr8_3:30368221-30368240 None:intergenic 40.0%
!! ACACACTGCTTTTGCAACAA+AGG - chr8_3:30368404-30368423 Msa1285550:intron 40.0%
CACTACAAAACCACAAGAGA+AGG + chr8_3:30368595-30368614 None:intergenic 40.0%
GGATAGAAAATCTGTGAGTG+TGG + chr8_3:30368693-30368712 None:intergenic 40.0%
ACTTTACACTACCAGTGTTG+AGG - chr8_3:30368860-30368879 Msa1285550:intron 40.0%
TTTATTCCAAACACTGGTCG+TGG - chr8_3:30368978-30368997 Msa1285550:intron 40.0%
AGGTGCAACTTCTCATTGTT+TGG - chr8_3:30369007-30369026 Msa1285550:intron 40.0%
GGTGCAACTTCTCATTGTTT+GGG - chr8_3:30369008-30369027 Msa1285550:intron 40.0%
GCTTACAGTTCGAGTACTAT+AGG + chr8_3:30369114-30369133 None:intergenic 40.0%
!!! TGCGCTTTTTCAACAGATTG+GGG - chr8_3:30369198-30369217 Msa1285550:intron 40.0%
! TTTTCAACAGATTGGGGTGA+TGG - chr8_3:30369204-30369223 Msa1285550:intron 40.0%
! ATGGTTCATGGTGATGACAA+GGG - chr8_3:30369229-30369248 Msa1285550:intron 40.0%
! TGAACTGAAGCTACTTTAGG+TGG + chr8_3:30369265-30369284 None:intergenic 40.0%
CGCAACTGTGAATATGTTGT+TGG - chr8_3:30369348-30369367 Msa1285550:intron 40.0%
GTGAATATGTTGTTGGAAGC+AGG - chr8_3:30369355-30369374 Msa1285550:intron 40.0%
CACTGAGAATATTTCCATCC+AGG + chr8_3:30369418-30369437 None:intergenic 40.0%
CTGGATGGAAATATTCTCAG+TGG - chr8_3:30369416-30369435 Msa1285550:intron 40.0%
GAAAGGGTTTACTTACCAAC+TGG + chr8_3:30370069-30370088 None:intergenic 40.0%
!! TGTCTGTTGGTTTCTGTATC+AGG - chr8_3:30370107-30370126 Msa1285550:intron 40.0%
ACGCATGTGATTGGACTAAT+CGG - chr8_3:30370162-30370181 Msa1285550:intron 40.0%
CATTCAAAGTGCAAGATGGA+AGG + chr8_3:30370231-30370250 None:intergenic 40.0%
! GTGTCATTCAAAGTGCAAGA+TGG + chr8_3:30370235-30370254 None:intergenic 40.0%
GTTTATAATGCTTCAGGAGG+TGG - chr8_3:30370457-30370476 Msa1285550:intron 40.0%
GAACAATGCTTATACCTTCG+GGG + chr8_3:30370562-30370581 None:intergenic 40.0%
AGTTATTAAGAGACGGAGGT+AGG + chr8_3:30370616-30370635 None:intergenic 40.0%
CTCAAGTTATTAAGAGACGG+AGG + chr8_3:30370620-30370639 None:intergenic 40.0%
!! TGTCTCATTTGAGTTGTGCA+TGG - chr8_3:30370640-30370659 Msa1285550:intron 40.0%
TTTGTGCATGCTTGGTATCA+CGG - chr8_3:30370767-30370786 Msa1285550:intron 40.0%
TCTCCTATTAAGCGCATGTT+TGG + chr8_3:30370828-30370847 None:intergenic 40.0%
AACATGCGCTTAATAGGAGA+CGG - chr8_3:30370828-30370847 Msa1285550:intron 40.0%
CCTAAAAGGTCAACAACACA+AGG + chr8_3:30371014-30371033 None:intergenic 40.0%
!! CCTTGTGTTGTTGACCTTTT+AGG - chr8_3:30371011-30371030 Msa1285550:intron 40.0%
TGCAAAGAAGTGGTCATACT+GGG - chr8_3:30371061-30371080 Msa1285550:intron 40.0%
!! TCAGTGAAGGCACCATTAAA+TGG + chr8_3:30371133-30371152 None:intergenic 40.0%
CAATCGACATAAACAAGCTG+TGG + chr8_3:30371314-30371333 None:intergenic 40.0%
TCGATTGAAAGCCAATGGAA+TGG - chr8_3:30371327-30371346 Msa1285550:intron 40.0%
!! TAACATTTGGTGCAAACCAG+AGG + chr8_3:30371370-30371389 None:intergenic 40.0%
!! TTAGAGCTCTGGGTGATAAT+TGG - chr8_3:30371498-30371517 Msa1285550:CDS 40.0%
! GCGGTTATATGCTATTGACT+TGG - chr8_3:30372135-30372154 Msa1285550:CDS 40.0%
CAACACCGCTAAAAACGTAA+AGG + chr8_3:30372188-30372207 None:intergenic 40.0%
!!! CTTTACGTTTTTAGCGGTGT+TGG - chr8_3:30372186-30372205 Msa1285550:intron 40.0%
GGTATACCTATCATTACTCG+TGG + chr8_3:30372654-30372673 None:intergenic 40.0%
AAACAATGTGTACTAGTCGC+TGG + chr8_3:30373570-30373589 None:intergenic 40.0%
! GCGACTAGTACACATTGTTT+TGG - chr8_3:30373570-30373589 Msa1285550:intron 40.0%
ACATCACCTATGATTGTTGC+TGG - chr8_3:30373623-30373642 Msa1285550:CDS 40.0%
GGCTTGTGTATTTGCCATTA+TGG - chr8_3:30373956-30373975 Msa1285550:intron 40.0%
TTGTTGTCATGTTTAGGTGG+GGG - chr8_3:30374264-30374283 Msa1285550:intron 40.0%
GTCACATTCATGTGCTTCAA+GGG + chr8_3:30374529-30374548 None:intergenic 40.0%
TGTCACATTCATGTGCTTCA+AGG + chr8_3:30374530-30374549 None:intergenic 40.0%
GTTCTGCAGAACCTGTTAAT+GGG - chr8_3:30374620-30374639 Msa1285550:intron 40.0%
AGAGTTAAATTATGTGCGCG+GGG - chr8_3:30374648-30374667 Msa1285550:intron 40.0%
TGCCGAAATTTAACTCTGCA+AGG + chr8_3:30374757-30374776 None:intergenic 40.0%
CGGCAGAGTTATTTGTGATT+TGG - chr8_3:30374772-30374791 Msa1285550:intron 40.0%
CTCACTCTGTGTGTTGTGTT+GGG + chr8_3:30365976-30365995 None:intergenic 45.0%
ACTCACTCTGTGTGTTGTGT+TGG + chr8_3:30365977-30365996 None:intergenic 45.0%
ACAGAGTGAGTCTCCTCTTA+CGG - chr8_3:30365986-30366005 Msa1285550:intron 45.0%
GCCTTCTTTCCAACACAACA+AGG - chr8_3:30366041-30366060 Msa1285550:intron 45.0%
!! ACGGTGTTACCTTGTTGTGT+TGG + chr8_3:30366053-30366072 None:intergenic 45.0%
GTGCTTGTCATCCTTCACAA+TGG - chr8_3:30366149-30366168 Msa1285550:intron 45.0%
CTTGTCATCCTTCACAATGG+CGG - chr8_3:30366152-30366171 Msa1285550:intron 45.0%
TTGTCATCCTTCACAATGGC+GGG - chr8_3:30366153-30366172 Msa1285550:intron 45.0%
!! TGTAGGTGGTGGAAAGAAGA+AGG - chr8_3:30366325-30366344 Msa1285550:intron 45.0%
AGGCTGAAAACTTCGGAGAA+TGG - chr8_3:30366387-30366406 Msa1285550:intron 45.0%
GTTGCTACATTCTCAGACCT+TGG - chr8_3:30366603-30366622 Msa1285550:intron 45.0%
CATTCTCAGACCTTGGTCAA+TGG - chr8_3:30366610-30366629 Msa1285550:intron 45.0%
GACCTTGGTCAATGGCTATT+TGG - chr8_3:30366618-30366637 Msa1285550:intron 45.0%
TCCCAAATAGCCATTGACCA+AGG + chr8_3:30366623-30366642 None:intergenic 45.0%
TGCACCGTAAGCTCGAAAAT+TGG + chr8_3:30366756-30366775 None:intergenic 45.0%
GTTCAACCGCTAATATCAGC+CGG - chr8_3:30367053-30367072 Msa1285550:intron 45.0%
AGCCTAAGCTTAGTCAGACA+TGG - chr8_3:30367128-30367147 Msa1285550:intron 45.0%
CTGGAGCAAAACCCTTGATA+TGG + chr8_3:30367331-30367350 None:intergenic 45.0%
! TATCAAGGGTTTTGCTCCAG+AGG - chr8_3:30367331-30367350 Msa1285550:intron 45.0%
ACCAATCAGCATGACATGCA+GGG + chr8_3:30367424-30367443 None:intergenic 45.0%
AACCAATCAGCATGACATGC+AGG + chr8_3:30367425-30367444 None:intergenic 45.0%
ATGCTGCTGATAGAAGGACT+AGG + chr8_3:30367476-30367495 None:intergenic 45.0%
CATAGCATGCTGCTGATAGA+AGG + chr8_3:30367482-30367501 None:intergenic 45.0%
! AAGGAAGCGTGCAGAATTCA+AGG + chr8_3:30368161-30368180 None:intergenic 45.0%
CGTGAGTTTCTTTGGCAAGA+AGG - chr8_3:30368381-30368400 Msa1285550:intron 45.0%
!! CACTGCTTTTGCAACAAAGG+AGG - chr8_3:30368407-30368426 Msa1285550:intron 45.0%
AAAGGAGGAAGCAGATACAG+AGG - chr8_3:30368422-30368441 Msa1285550:intron 45.0%
TGTGTGTGTACCTTCTCTTG+TGG - chr8_3:30368582-30368601 Msa1285550:intron 45.0%
AGAAAATCTGTGAGTGTGGG+TGG + chr8_3:30368689-30368708 None:intergenic 45.0%
TTTGGCAGTTCCTGTCGTAA+AGG - chr8_3:30368803-30368822 Msa1285550:intron 45.0%
TTGGCAGTTCCTGTCGTAAA+GGG - chr8_3:30368804-30368823 Msa1285550:intron 45.0%
! CTTTTCTTGCCCTTTACGAC+AGG + chr8_3:30368816-30368835 None:intergenic 45.0%
AGTGAGCTTGAGAAGTTTGC+TGG - chr8_3:30368834-30368853 Msa1285550:intron 45.0%
TGTATTCCACGACCAGTGTT+TGG + chr8_3:30368987-30369006 None:intergenic 45.0%
AACACTGGTCGTGGAATACA+AGG - chr8_3:30368987-30369006 Msa1285550:intron 45.0%
TGAGAAGGGAGAGAAAGCAA+TGG - chr8_3:30369070-30369089 Msa1285550:intron 45.0%
AATGGTCTGGCAGAACTCAT+GGG - chr8_3:30369088-30369107 Msa1285550:intron 45.0%
! GATGGTTCATGGTGATGACA+AGG - chr8_3:30369228-30369247 Msa1285550:intron 45.0%
! TCATGGTGATGACAAGGGAT+TGG - chr8_3:30369234-30369253 Msa1285550:intron 45.0%
TCAGCATCTTTGTAAGGCAC+AGG + chr8_3:30369301-30369320 None:intergenic 45.0%
CATATTCACAGTTGCGGTAC+AGG + chr8_3:30369344-30369363 None:intergenic 45.0%
TCCAGGAGAATAGTTGTCTC+TGG + chr8_3:30369401-30369420 None:intergenic 45.0%
GAGACAACTATTCTCCTGGA+TGG - chr8_3:30369401-30369420 Msa1285550:intron 45.0%
AGAGTGTGGCACGATTATAC+AGG + chr8_3:30369936-30369955 None:intergenic 45.0%
TCAAAACTGTCCTTCCCAGT+TGG - chr8_3:30370051-30370070 Msa1285550:intron 45.0%
GGTTTACTTACCAACTGGGA+AGG + chr8_3:30370064-30370083 None:intergenic 45.0%
ACAGAAACCAACAGACAGAC+AGG + chr8_3:30370104-30370123 None:intergenic 45.0%
TGAGACACTTTGTGCATGCT+TGG - chr8_3:30370759-30370778 Msa1285550:intron 45.0%
! AAAAGCACACGGTGCCTAAA+AGG + chr8_3:30371028-30371047 None:intergenic 45.0%
CAGTATGACCACTTCTTTGC+AGG + chr8_3:30371062-30371081 None:intergenic 45.0%
CTGCAAAGAAGTGGTCATAC+TGG - chr8_3:30371060-30371079 Msa1285550:intron 45.0%
GCAAAGAAGTGGTCATACTG+GGG - chr8_3:30371062-30371081 Msa1285550:intron 45.0%
TGGTGCCTTCACTGAATTTG+TGG - chr8_3:30371138-30371157 Msa1285550:CDS 45.0%
! TTTGGTGCAAACCAGAGGAT+TGG + chr8_3:30371365-30371384 None:intergenic 45.0%
ACTCAATGGCAGCGTAATGT+GGG + chr8_3:30371803-30371822 None:intergenic 45.0%
GATAGGTATACCACCATAGG+TGG - chr8_3:30372662-30372681 Msa1285550:intron 45.0%
TAGAGTGGTATTGCCACCTA+TGG + chr8_3:30372678-30372697 None:intergenic 45.0%
GGAAATGGCATGAGTGAGAT+GGG + chr8_3:30372827-30372846 None:intergenic 45.0%
AATCGACAGTGAGAGAGAGA+GGG + chr8_3:30372915-30372934 None:intergenic 45.0%
CAAGGTTTGAGAGTGAATCG+TGG + chr8_3:30372966-30372985 None:intergenic 45.0%
GCCGCAATGTATAGGGTTTA+AGG + chr8_3:30373548-30373567 None:intergenic 45.0%
!!! CACATTGTTTTGGCCTCTGA+CGG - chr8_3:30373580-30373599 Msa1285550:CDS 45.0%
! ACAAACTTTTCTGCCGTCAG+AGG + chr8_3:30373596-30373615 None:intergenic 45.0%
CAAGCCCTTACACATAACTG+AGG + chr8_3:30373942-30373961 None:intergenic 45.0%
GAATCACTACCCTCTTGTAC+AGG - chr8_3:30374585-30374604 Msa1285550:intron 45.0%
CTACCCTCTTGTACAGGAAA+AGG - chr8_3:30374591-30374610 Msa1285550:intron 45.0%
! CTGCCTTTTCCTGTACAAGA+GGG + chr8_3:30374597-30374616 None:intergenic 45.0%
! ACTGCCTTTTCCTGTACAAG+AGG + chr8_3:30374598-30374617 None:intergenic 45.0%
CTTGTACAGGAAAAGGCAGT+TGG - chr8_3:30374598-30374617 Msa1285550:intron 45.0%
GGTTCTGCAGAACCTGTTAA+TGG - chr8_3:30374619-30374638 Msa1285550:intron 45.0%
! GAGCCTTGCAGGTTATCTTT+TGG - chr8_3:30374688-30374707 Msa1285550:CDS 45.0%
CTGCCAAAAGATAACCTGCA+AGG + chr8_3:30374694-30374713 None:intergenic 45.0%
!!! AGTATTAATTTTTTTTTTTA+AGG - chr8_3:30372506-30372525 Msa1285550:CDS 5.0%
!!! CTTTTTATTAATAAAAAATT+TGG - chr8_3:30372716-30372735 Msa1285550:intron 5.0%
GGGTAATCTCCAGCTAGCTA+GGG + chr8_3:30365956-30365975 None:intergenic 50.0%
TGGGTAATCTCCAGCTAGCT+AGG + chr8_3:30365957-30365976 None:intergenic 50.0%
AATGGAACGTGCAAGAGCGA+TGG + chr8_3:30366014-30366033 None:intergenic 50.0%
GGAAAGAAGGCGAGAGAGAA+TGG + chr8_3:30366032-30366051 None:intergenic 50.0%
TGTCATCCTTCACAATGGCG+GGG - chr8_3:30366154-30366173 Msa1285550:intron 50.0%
TCCCTGCATGTCATGCTGAT+TGG - chr8_3:30367420-30367439 Msa1285550:intron 50.0%
CTATCAGCAGCATGCTATGC+TGG - chr8_3:30367483-30367502 Msa1285550:intron 50.0%
GCATGCTATGCTGGATGATC+TGG - chr8_3:30367492-30367511 Msa1285550:intron 50.0%
ACCCAAGCAACCTGGGTAAA+GGG + chr8_3:30367619-30367638 None:intergenic 50.0%
TTTGGTCACCCAAGCAACCT+GGG + chr8_3:30367626-30367645 None:intergenic 50.0%
ATTTGGTCACCCAAGCAACC+TGG + chr8_3:30367627-30367646 None:intergenic 50.0%
GTTGCTTGGGTGACCAAATC+TGG - chr8_3:30367628-30367647 Msa1285550:intron 50.0%
GCAATCCCACACCATTCATC+AGG - chr8_3:30367794-30367813 Msa1285550:intron 50.0%
CTTCACGGAGACCAATTCAC+TGG + chr8_3:30368206-30368225 None:intergenic 50.0%
GCAGGAGTCGTGAGTTTCTT+TGG - chr8_3:30368373-30368392 Msa1285550:intron 50.0%
ACGCATGCACATGAAGCAGA+GGG + chr8_3:30368639-30368658 None:intergenic 50.0%
AACGCATGCACATGAAGCAG+AGG + chr8_3:30368640-30368659 None:intergenic 50.0%
!! GAGCTTGAGAAGTTTGCTGG+TGG - chr8_3:30368837-30368856 Msa1285550:intron 50.0%
TCAGACACACACCTCAACAC+TGG + chr8_3:30368874-30368893 None:intergenic 50.0%
AGGGAGAGAAAGCAATGGTC+TGG - chr8_3:30369075-30369094 Msa1285550:intron 50.0%
CAATGGTCTGGCAGAACTCA+TGG - chr8_3:30369087-30369106 Msa1285550:intron 50.0%
! ACAGATTGGGGTGATGGTGA+TGG - chr8_3:30369210-30369229 Msa1285550:intron 50.0%
GTTGTCTCTGGCATCTGACT+CGG + chr8_3:30369389-30369408 None:intergenic 50.0%
GCCAGAGACAACTATTCTCC+TGG - chr8_3:30369397-30369416 Msa1285550:intron 50.0%
GGCCCGATTTCAATCCTTAG+AGG + chr8_3:30369457-30369476 None:intergenic 50.0%
AAGGATTGAAATCGGGCCCA+AGG - chr8_3:30369459-30369478 Msa1285550:intron 50.0%
CACTATCACGACGAACAGCA+CGG + chr8_3:30369615-30369634 None:intergenic 50.0%
ATCGTGCCACACTCTGATTG+AGG - chr8_3:30369941-30369960 Msa1285550:intron 50.0%
CTAAACGCCTGTCTGTCTGT+TGG - chr8_3:30370094-30370113 Msa1285550:intron 50.0%
! GGGAGTTCTGGCTGATCAAA+GGG + chr8_3:30370542-30370561 None:intergenic 50.0%
CTTATACCTTCGGGGAGTTC+TGG + chr8_3:30370554-30370573 None:intergenic 50.0%
! CTTGCCTGACGAAAAGCACA+CGG + chr8_3:30371039-30371058 None:intergenic 50.0%
CACTCAATGGCAGCGTAATG+TGG + chr8_3:30371804-30371823 None:intergenic 50.0%
AGTGGTATTGCCACCTATGG+TGG + chr8_3:30372675-30372694 None:intergenic 50.0%
CCATCTCTCTCTCTCTCACT+CGG - chr8_3:30372801-30372820 Msa1285550:intron 50.0%
GGGAAATGGCATGAGTGAGA+TGG + chr8_3:30372828-30372847 None:intergenic 50.0%
GAATCGACAGTGAGAGAGAG+AGG + chr8_3:30372916-30372935 None:intergenic 50.0%
AGAGTGAATCGTGGCTGACA+CGG + chr8_3:30372957-30372976 None:intergenic 50.0%
CGGGCACATGATTACAGTAG+AGG - chr8_3:30373663-30373682 Msa1285550:CDS 50.0%
CTATAGAGGAAGAGCCTTGC+AGG - chr8_3:30374677-30374696 Msa1285550:CDS 50.0%
!! AAGAGCGATGGTGCCGTAAG+AGG + chr8_3:30366002-30366021 None:intergenic 55.0%
CTTCGGAGAATGGTACTCCG+AGG - chr8_3:30366397-30366416 Msa1285550:intron 55.0%
TGCCCTTTACCCAGGTTGCT+TGG - chr8_3:30367614-30367633 Msa1285550:intron 55.0%
GCCCTTTACCCAGGTTGCTT+GGG - chr8_3:30367615-30367634 Msa1285550:intron 55.0%
CACCCAAGCAACCTGGGTAA+AGG + chr8_3:30367620-30367639 None:intergenic 55.0%
CGCATGCACATGAAGCAGAG+GGG + chr8_3:30368638-30368657 None:intergenic 55.0%
!! GGGGTGATGGTGATGGTTCA+TGG - chr8_3:30369217-30369236 Msa1285550:intron 55.0%
! CGTGCTGTTCGTCGTGATAG+TGG - chr8_3:30369613-30369632 Msa1285550:intron 55.0%
! CTTAGCTCCTTGGTGTGACG+AGG - chr8_3:30369804-30369823 Msa1285550:intron 55.0%
CATACCTCCTCGTCACACCA+AGG + chr8_3:30369814-30369833 None:intergenic 55.0%
GCAAGGACAAAGGGTGAGAC+AGG - chr8_3:30370494-30370513 Msa1285550:intron 55.0%
! GGGGAGTTCTGGCTGATCAA+AGG + chr8_3:30370543-30370562 None:intergenic 55.0%
GTGCATGCTTGGTATCACGG+TGG - chr8_3:30370770-30370789 Msa1285550:intron 55.0%
CATGCTTGGTATCACGGTGG+AGG - chr8_3:30370773-30370792 Msa1285550:intron 55.0%
CAGGCAAGCCTGCAAAGAAG+TGG - chr8_3:30371051-30371070 Msa1285550:intron 55.0%
! CCAACAGGAAGGGTGTAGAG+TGG + chr8_3:30372693-30372712 None:intergenic 55.0%
CCACTCTACACCCTTCCTGT+TGG - chr8_3:30372690-30372709 Msa1285550:intron 55.0%
CCGAGTGAGAGAGAGAGAGA+TGG + chr8_3:30372804-30372823 None:intergenic 55.0%
ATCACAGCGGCGAGAGAGAA+GGG + chr8_3:30372848-30372867 None:intergenic 55.0%
AATCACAGCGGCGAGAGAGA+AGG + chr8_3:30372849-30372868 None:intergenic 55.0%
AATCGTGGCTGACACGGCTT+AGG + chr8_3:30372951-30372970 None:intergenic 55.0%
GTCGCTGGCCGCAATGTATA+GGG + chr8_3:30373555-30373574 None:intergenic 55.0%
AGTCGCTGGCCGCAATGTAT+AGG + chr8_3:30373556-30373575 None:intergenic 55.0%
ATCGGTCCCCGCCATTGTGA+AGG + chr8_3:30366163-30366182 None:intergenic 60.0%
! AGCTCCTTGGTGTGACGAGG+AGG - chr8_3:30369807-30369826 Msa1285550:intron 60.0%
GATCAGCCAGAACTCCCCGA+AGG - chr8_3:30370545-30370564 Msa1285550:intron 60.0%
! GGCACCGTGTGCTTTTCGTC+AGG - chr8_3:30371032-30371051 Msa1285550:intron 60.0%
GCGGCGAGAGAGAAGGGAAA+TGG + chr8_3:30372842-30372861 None:intergenic 60.0%
GCGCGGGGAAGAGTCTATAG+AGG - chr8_3:30374663-30374682 Msa1285550:intron 60.0%
TGGCTGACACGGCTTAGGCG+GGG + chr8_3:30372946-30372965 None:intergenic 65.0%
GTGGCTGACACGGCTTAGGC+GGG + chr8_3:30372947-30372966 None:intergenic 65.0%
CGTGGCTGACACGGCTTAGG+CGG + chr8_3:30372948-30372967 None:intergenic 65.0%
GCTGACACGGCTTAGGCGGG+GGG + chr8_3:30372944-30372963 None:intergenic 70.0%
GGCTGACACGGCTTAGGCGG+GGG + chr8_3:30372945-30372964 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 30365940 30374985 30365940 ID=Msa1285550;Name=Msa1285550
chr8_3 mRNA 30365940 30374985 30365940 ID=Msa1285550-mRNA-1;Parent=Msa1285550;Name=Msa1285550-mRNA-1;_AED=0.24;_eAED=0.24;_QI=127|0.62|0.52|0.82|0.56|0.41|17|0|494
chr8_3 exon 30365940 30365971 30365940 ID=Msa1285550-mRNA-1:exon:9884;Parent=Msa1285550-mRNA-1
chr8_3 exon 30368383 30368388 30368383 ID=Msa1285550-mRNA-1:exon:9883;Parent=Msa1285550-mRNA-1
chr8_3 exon 30369219 30369224 30369219 ID=Msa1285550-mRNA-1:exon:9882;Parent=Msa1285550-mRNA-1
chr8_3 exon 30370389 30370452 30370389 ID=Msa1285550-mRNA-1:exon:9881;Parent=Msa1285550-mRNA-1
chr8_3 exon 30371097 30371315 30371097 ID=Msa1285550-mRNA-1:exon:9880;Parent=Msa1285550-mRNA-1
chr8_3 exon 30371427 30371476 30371427 ID=Msa1285550-mRNA-1:exon:9879;Parent=Msa1285550-mRNA-1
chr8_3 exon 30371491 30371548 30371491 ID=Msa1285550-mRNA-1:exon:9878;Parent=Msa1285550-mRNA-1
chr8_3 exon 30371571 30371711 30371571 ID=Msa1285550-mRNA-1:exon:9877;Parent=Msa1285550-mRNA-1
chr8_3 exon 30371798 30371950 30371798 ID=Msa1285550-mRNA-1:exon:9876;Parent=Msa1285550-mRNA-1
chr8_3 exon 30372044 30372166 30372044 ID=Msa1285550-mRNA-1:exon:9875;Parent=Msa1285550-mRNA-1
chr8_3 exon 30372482 30372548 30372482 ID=Msa1285550-mRNA-1:exon:9874;Parent=Msa1285550-mRNA-1
chr8_3 exon 30373137 30373297 30373137 ID=Msa1285550-mRNA-1:exon:9873;Parent=Msa1285550-mRNA-1
chr8_3 exon 30373573 30373689 30373573 ID=Msa1285550-mRNA-1:exon:9872;Parent=Msa1285550-mRNA-1
chr8_3 exon 30374273 30374365 30374273 ID=Msa1285550-mRNA-1:exon:9871;Parent=Msa1285550-mRNA-1
chr8_3 exon 30374507 30374595 30374507 ID=Msa1285550-mRNA-1:exon:9870;Parent=Msa1285550-mRNA-1
chr8_3 exon 30374673 30374782 30374673 ID=Msa1285550-mRNA-1:exon:9869;Parent=Msa1285550-mRNA-1
chr8_3 exon 30374863 30374985 30374863 ID=Msa1285550-mRNA-1:exon:9868;Parent=Msa1285550-mRNA-1
chr8_3 five_prime_UTR 30374863 30374985 30374863 ID=Msa1285550-mRNA-1:five_prime_utr;Parent=Msa1285550-mRNA-1
chr8_3 five_prime_UTR 30374779 30374782 30374779 ID=Msa1285550-mRNA-1:five_prime_utr;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30374673 30374778 30374673 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30374507 30374595 30374507 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30374273 30374365 30374273 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30373573 30373689 30373573 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30373137 30373297 30373137 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30372482 30372548 30372482 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30372044 30372166 30372044 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30371798 30371950 30371798 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30371571 30371711 30371571 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30371491 30371548 30371491 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30371427 30371476 30371427 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30371097 30371315 30371097 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30370389 30370452 30370389 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30369219 30369224 30369219 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30368383 30368388 30368383 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
chr8_3 CDS 30365940 30365971 30365940 ID=Msa1285550-mRNA-1:cds;Parent=Msa1285550-mRNA-1
Gene Sequence

>Msa1285550

ATGTGCTTGTCATCCTTCACAATGGCGGGGACCGATGACAACAAAACACAACAATCCGCTGCAAAACCCCAAAAAAAACCAAAACAACCAAAACCACAACAATCAGGTGGTGGAAAGAAGAAGGAAGTCAAGAAAGAAACTAGATTAGGTTTGACCAATAAGAAGGCTGAAAACTTCGGAGAATGGTACTCCGAGGTTGTTGTGAATGGGGAAATGATTGAGTACTATGATATTTCTGGTTGCTACATTCTCAGACCTTGGTCAATGGCTATTTGGGAGATTATGCAAGCGTTTTTTGATCCAGAAATAAAGAAAATGAAGATCAAGAACTGCTACTTCCCTCTGTTTGTTTCTAATACTGTTCTGGAAAAGGAGAAGGACCATATCAAGGGTTTTGCTCCAGAGGTTGCTTGGGTGACCAAATCTGGAGAATCTGATTTAGAGATTCCTATTGCTATTCGTCCAACTAGTGAAACTGTTATGTATCCTTACTACTCTAAGTGGATAAGGGGACATCGTGACTTGCCTTTGAAACTTAATCAGTGGTGCAATGTTGTTAGATGGGAGAGTCGTGAGTTTCTTTGGCAAGAAGGACACACTGCTTTTGCAACAAAGGAGGAAGCAGATACAGAGGTTCTTGAGATTTTGGAATTATATCGGTGTATCTATGAAGAGTATTTGGCAGTTCCTGTCGTAAAGGGCAAGAAAAGTGAGCTTGAGAAGTTTGCTGGTGGACTTTACACTACCAGTGTTGAGGCATTTATTCCAAACACTGGTCGTGGAATACAAGGTGCAACTTCTCATTGTTTGGGACAAAATTTTGCTAAAATGTTCGAGATAAACTATGAAAATGAGAAGGGAGAGAAAGCAATGGTCTGGCAGAACTCATGGGCCTATAGTACTCGAACTATTGGGGTGATGGTGATGGTTCATGGTGATGACAAGGGATTGGTGCTGCCACCTAAAGTAGCTTCAGTTCAAGTCATTGTGATTCCTGTGCCTTACAAAGATGCTGATACTCAAGGAATCTTTGATGCCTGTACCGCAACTGAATTCGTGCCGAGTCAGATGCCAGAGACAACTATTCTCCTGGATGGAAATATTCTCAGTGTTCCTCTAAGGATTGAAATCGGGCCCAAGGATTTAGCAAATAAGCAGGTCCGTGCTGTTCGTCGTGATAGTGGAGCAAAGATCGACATTGATAATGATGATTTGGTTGAGGAAATAAAGAAGTTGCTCGATAATATTCAACAGAATTTGTTTGATGTTGCAAAACAAAAACGAGATGCATGCATTCAGATCATACATACATGGGATGAGTTTGTAAAAGCTTTGAATGAAAAAAAGATGATCTTAGCTCCTTGGTGTGACGAGGAGGAGGTGGAAAAATATGTTAAAGCAAGGACAAAGGGTGAGACAGGAGCTGCAAAGACACTCTGTAAACGAAGTAGGAGTTATCTGTCTTCCCTTACTGCTTTTAAATAA

Protein sequence

>Msa1285550

MCLSSFTMAGTDDNKTQQSAAKPQKKPKQPKPQQSGGGKKKEVKKETRLGLTNKKAENFGEWYSEVVVNGEMIEYYDISGCYILRPWSMAIWEIMQAFFDPEIKKMKIKNCYFPLFVSNTVLEKEKDHIKGFAPEVAWVTKSGESDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWESREFLWQEGHTAFATKEEADTEVLEILELYRCIYEEYLAVPVVKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINYENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQGIFDACTATEFVPSQMPETTILLDGNILSVPLRIEIGPKDLANKQVRAVRRDSGAKIDIDNDDLVEEIKKLLDNIQQNLFDVAKQKRDACIQIIHTWDEFVKALNEKKMILAPWCDEEEVEKYVKARTKGETGAAKTLCKRSRSYLSSLTAFK*