Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432940 | XP_024633382.1 | 94.690 | 678 | 35 | 1 | 1 | 677 | 1 | 678 | 0.0 | 1312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432940 | sp|Q9SUU1|BOR7_ARATH | 68.203 | 651 | 194 | 4 | 4 | 642 | 7 | 656 | 0.0 | 927 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432940 | G7JBM4 | 94.690 | 678 | 35 | 1 | 1 | 677 | 1 | 678 | 0.0 | 1312 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0143280 | Msa0432940 | -0.814715 | 1.337957e-51 | -8.615850e-47 |
| Msa0180100 | Msa0432940 | -0.838750 | 2.388396e-57 | -8.615850e-47 |
| Msa0183200 | Msa0432940 | -0.801755 | 7.752520e-49 | -8.615850e-47 |
| Msa0184510 | Msa0432940 | -0.856981 | 2.227162e-62 | -8.615850e-47 |
| Msa0207680 | Msa0432940 | 0.833767 | 4.414939e-56 | -8.615850e-47 |
| Msa0209360 | Msa0432940 | 0.812217 | 4.737134e-51 | -8.615850e-47 |
| Msa0236940 | Msa0432940 | 0.811886 | 5.593982e-51 | -8.615850e-47 |
| Msa0378310 | Msa0432940 | -0.818472 | 1.925946e-52 | -8.615850e-47 |
| Msa0382860 | Msa0432940 | 0.991201 | 2.063361e-186 | -8.615850e-47 |
| Msa0414250 | Msa0432940 | -0.807693 | 4.461688e-50 | -8.615850e-47 |
| Msa0432940 | Msa0432970 | 0.998426 | 1.018936e-264 | -8.615850e-47 |
| Msa0432940 | Msa0474570 | 0.805254 | 1.459012e-49 | -8.615850e-47 |
| Msa0432940 | Msa0477030 | 0.985090 | 1.688039e-162 | -8.615850e-47 |
| Msa0432940 | Msa0647320 | 0.826214 | 3.067636e-54 | -8.615850e-47 |
| Msa0432940 | Msa0749150 | -0.823218 | 1.559428e-53 | -8.615850e-47 |
| Msa0432940 | Msa0792880 | -0.816040 | 6.788448e-52 | -8.615850e-47 |
| Msa0432940 | Msa0803530 | -0.820133 | 8.056100e-53 | -8.615850e-47 |
| Msa0432940 | Msa0828900 | -0.821512 | 3.881652e-53 | -8.615850e-47 |
| Msa0432940 | Msa0931550 | -0.819487 | 1.131987e-52 | -8.615850e-47 |
| Msa0432940 | Msa0950470 | -0.818834 | 1.593630e-52 | -8.615850e-47 |
| Msa0432940 | Msa0950570 | -0.822386 | 2.436017e-53 | -8.615850e-47 |
| Msa0432940 | Msa1024570 | 0.818243 | 2.170506e-52 | -8.615850e-47 |
| Msa0432940 | Msa1031180 | 0.824221 | 9.075653e-54 | -8.615850e-47 |
| Msa0432940 | Msa1031530 | -0.806397 | 8.392498e-50 | -8.615850e-47 |
| Msa0432940 | Msa1070360 | 0.858015 | 1.100583e-62 | -8.615850e-47 |
| Msa0432940 | Msa1117510 | -0.834520 | 2.858833e-56 | -8.615850e-47 |
| Msa0432940 | Msa1119430 | 0.830238 | 3.287298e-55 | -8.615850e-47 |
| Msa0432940 | Msa1125450 | -0.810545 | 1.093091e-50 | -8.615850e-47 |
| Msa0432940 | Msa1127910 | 0.805949 | 1.042717e-49 | -8.615850e-47 |
| Msa0432940 | Msa1161210 | -0.814274 | 1.674772e-51 | -8.615850e-47 |
| Msa0432940 | Msa1164570 | -0.810632 | 1.046833e-50 | -8.615850e-47 |
| Msa0432940 | Msa1236860 | -0.807256 | 5.524506e-50 | -8.615850e-47 |
| Msa0432940 | Msa1323260 | -0.811269 | 7.618467e-51 | -8.615850e-47 |
| Msa0432940 | Msa1333210 | 0.841461 | 4.687014e-58 | -8.615850e-47 |
| Msa0432940 | Msa1343450 | -0.813410 | 2.596154e-51 | -8.615850e-47 |
| Msa0432940 | Msa1371300 | 0.989156 | 6.308531e-177 | -8.615850e-47 |
| Msa0432940 | Msa1386250 | -0.808225 | 3.438888e-50 | -8.615850e-47 |
| Msa0432940 | Msa1460530 | -0.834410 | 3.045832e-56 | -8.615850e-47 |
| Msa0275560 | Msa0432940 | 0.832739 | 7.961802e-56 | -8.615850e-47 |
| Msa0295680 | Msa0432940 | 0.839878 | 1.217426e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432940 | MtrunA17_Chr3g0138161 | 94.690 | 678 | 35 | 1 | 1 | 677 | 1 | 678 | 0.0 | 1312 |
| Msa0432940 | MtrunA17_Chr1g0148971 | 76.006 | 646 | 146 | 3 | 3 | 642 | 19 | 661 | 0.0 | 1004 |
| Msa0432940 | MtrunA17_Chr2g0332331 | 68.037 | 657 | 200 | 5 | 4 | 654 | 11 | 663 | 0.0 | 901 |
| Msa0432940 | MtrunA17_Chr2g0332351 | 68.664 | 651 | 194 | 5 | 4 | 648 | 11 | 657 | 0.0 | 900 |
| Msa0432940 | MtrunA17_Chr2g0332471 | 69.147 | 645 | 189 | 5 | 4 | 642 | 11 | 651 | 0.0 | 897 |
| Msa0432940 | MtrunA17_Chr2g0332441 | 70.537 | 577 | 164 | 3 | 39 | 609 | 2 | 578 | 0.0 | 830 |
| Msa0432940 | MtrunA17_Chr2g0332491 | 62.128 | 639 | 159 | 4 | 4 | 642 | 11 | 566 | 0.0 | 773 |
| Msa0432940 | MtrunA17_Chr7g0270341 | 59.480 | 654 | 242 | 5 | 4 | 643 | 7 | 651 | 0.0 | 765 |
| Msa0432940 | MtrunA17_Chr2g0293661 | 57.562 | 648 | 254 | 4 | 4 | 639 | 7 | 645 | 0.0 | 763 |
| Msa0432940 | MtrunA17_Chr3g0117521 | 58.923 | 650 | 245 | 7 | 4 | 639 | 7 | 648 | 0.0 | 749 |
| Msa0432940 | MtrunA17_Chr2g0332391 | 65.805 | 348 | 113 | 3 | 172 | 513 | 1 | 348 | 5.18e-166 | 479 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432940 | AT4G32510.1 | 68.203 | 651 | 194 | 4 | 4 | 642 | 7 | 656 | 0.0 | 927 |
| Msa0432940 | AT4G32510.2 | 68.203 | 651 | 194 | 4 | 4 | 642 | 7 | 656 | 0.0 | 927 |
| Msa0432940 | AT5G25430.1 | 66.410 | 649 | 212 | 2 | 3 | 646 | 8 | 655 | 0.0 | 917 |
| Msa0432940 | AT1G15460.2 | 66.667 | 648 | 200 | 3 | 5 | 642 | 13 | 654 | 0.0 | 906 |
| Msa0432940 | AT1G15460.1 | 66.667 | 648 | 200 | 3 | 5 | 642 | 13 | 654 | 0.0 | 906 |
| Msa0432940 | AT1G74810.7 | 65.794 | 649 | 206 | 4 | 4 | 642 | 12 | 654 | 0.0 | 881 |
| Msa0432940 | AT1G74810.4 | 65.794 | 649 | 206 | 4 | 4 | 642 | 12 | 654 | 0.0 | 881 |
| Msa0432940 | AT1G74810.1 | 65.794 | 649 | 206 | 4 | 4 | 642 | 12 | 654 | 0.0 | 881 |
| Msa0432940 | AT1G15460.3 | 67.810 | 612 | 187 | 2 | 5 | 606 | 13 | 624 | 0.0 | 872 |
| Msa0432940 | AT1G74810.6 | 65.968 | 620 | 195 | 4 | 33 | 642 | 9 | 622 | 0.0 | 838 |
| Msa0432940 | AT1G74810.3 | 65.968 | 620 | 195 | 4 | 33 | 642 | 9 | 622 | 0.0 | 838 |
| Msa0432940 | AT3G62270.1 | 59.660 | 647 | 241 | 6 | 4 | 639 | 7 | 644 | 0.0 | 784 |
| Msa0432940 | AT2G47160.1 | 60.278 | 647 | 236 | 6 | 4 | 639 | 7 | 643 | 0.0 | 781 |
| Msa0432940 | AT2G47160.2 | 58.036 | 672 | 236 | 7 | 4 | 639 | 7 | 668 | 0.0 | 768 |
| Msa0432940 | AT3G06450.3 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 754 |
| Msa0432940 | AT3G06450.1 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 754 |
| Msa0432940 | AT3G06450.2 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 754 |
| Msa0432940 | AT3G06450.4 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 754 |
| Msa0432940 | AT1G15460.4 | 64.801 | 554 | 179 | 3 | 99 | 642 | 1 | 548 | 0.0 | 752 |
| Msa0432940 | AT1G74810.5 | 63.718 | 554 | 185 | 4 | 99 | 642 | 1 | 548 | 0.0 | 725 |
| Msa0432940 | AT1G74810.2 | 63.636 | 517 | 172 | 4 | 136 | 642 | 1 | 511 | 0.0 | 671 |
Find 209 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACCCGTGATTTATATATT+TGG | 0.189461 | 3_2:+85264092 | Msa0432940:CDS |
| AATTAAAATATAGGAAATAT+TGG | 0.193606 | 3_2:-85262215 | None:intergenic |
| CGAGGCTTTATTGCAGATTA+TGG | 0.224792 | 3_2:+85263683 | Msa0432940:CDS |
| TACCCGTGATTTATATATTT+GGG | 0.228711 | 3_2:+85264093 | Msa0432940:CDS |
| AGAATTGCAGGGGAGTTATT+TGG | 0.243689 | 3_2:+85263231 | Msa0432940:CDS |
| GGAATTATTCACTCAATTAT+AGG | 0.251240 | 3_2:+85262905 | Msa0432940:CDS |
| TAAAATTAAAATTAAAATAT+AGG | 0.263051 | 3_2:-85262224 | None:intergenic |
| CTGATTGGTTTATCGATAAT+AGG | 0.284857 | 3_2:+85264921 | Msa0432940:CDS |
| ATTATAACAGGTTAAAGAAT+TGG | 0.285654 | 3_2:+85264761 | Msa0432940:intron |
| ATGGCAATTGATAGTCTTCC+TGG | 0.286687 | 3_2:+85264999 | Msa0432940:CDS |
| CAAAGAGTTTGGCAGTTCTT+AGG | 0.288036 | 3_2:+85264418 | Msa0432940:CDS |
| GTCTTCCTGGGAATCAGTTC+TGG | 0.288459 | 3_2:+85265012 | Msa0432940:CDS |
| TTTCTTTCAAGAGGCTATAA+AGG | 0.293379 | 3_2:+85263272 | Msa0432940:CDS |
| AGCTTGAAGATGATCTTCTT+TGG | 0.301502 | 3_2:+85266048 | Msa0432940:exon |
| TGGTTAGGCTTGAATATCTT+TGG | 0.316056 | 3_2:-85265351 | None:intergenic |
| ATTACTTGTAACGCCGGCTT+GGG | 0.319641 | 3_2:-85265061 | None:intergenic |
| ATTCTTTGCTTCCGCGCTTC+CGG | 0.321126 | 3_2:+85262799 | Msa0432940:CDS |
| TTATTGTATGGAACAAATCT+AGG | 0.322748 | 3_2:-85262173 | None:intergenic |
| AATTCATTTGAACTTTGAAA+TGG | 0.326120 | 3_2:+85266132 | Msa0432940:three_prime_UTR |
| GCGCTTCCGGTCATTGCTTT+CGG | 0.332914 | 3_2:+85262812 | Msa0432940:CDS |
| TTACTATGATGCAGAGATAT+TGG | 0.337001 | 3_2:+85265659 | Msa0432940:CDS |
| CTTTCGGAGAACAACTTAGT+AGG | 0.339784 | 3_2:+85262828 | Msa0432940:CDS |
| GAAAGAGAATAATGGCAAAA+AGG | 0.355095 | 3_2:+85266093 | Msa0432940:three_prime_UTR |
| ATGAATGAAAACGCGTTTGA+TGG | 0.362058 | 3_2:-85262391 | None:intergenic |
| CTTGGCCTTCCTCCTTCAAA+TGG | 0.362198 | 3_2:+85264369 | Msa0432940:CDS |
| TACCAAGCTCTTTCTAGCTT+GGG | 0.365109 | 3_2:+85263021 | Msa0432940:CDS |
| CTGTTGTTCCATGCATTCCT+TGG | 0.365305 | 3_2:-85264573 | None:intergenic |
| AGTGGACAAAACAGCCTTCT+AGG | 0.365772 | 3_2:-85263776 | None:intergenic |
| AGTACCAGCTCTGAATTATA+TGG | 0.368865 | 3_2:+85264596 | Msa0432940:CDS |
| GGAACAAGAAAGGATTCAAT+TGG | 0.383575 | 3_2:+85266069 | Msa0432940:three_prime_UTR |
| ACTAGATTTACAAGAATTGC+AGG | 0.384496 | 3_2:+85263219 | Msa0432940:CDS |
| TCCCATGCATACAAAGAGTT+TGG | 0.386041 | 3_2:+85264407 | Msa0432940:CDS |
| GCAAGCTGTGTTCATTGAAA+TGG | 0.395458 | 3_2:+85264625 | Msa0432940:CDS |
| TGGGTCTGCGCAATCTGTTC+CGG | 0.400996 | 3_2:+85262666 | Msa0432940:CDS |
| ATTCAAGCCTAACCATCTTC+AGG | 0.402816 | 3_2:+85265359 | Msa0432940:CDS |
| GTACCAAGCTCTTTCTAGCT+TGG | 0.404814 | 3_2:+85263020 | Msa0432940:CDS |
| CAATCAGGAGGGACTGCAAT+AGG | 0.410300 | 3_2:-85264905 | None:intergenic |
| TAATAATAATGACAGCATAT+TGG | 0.412439 | 3_2:+85262760 | Msa0432940:intron |
| ATTAAAATATAGGAAATATT+GGG | 0.413687 | 3_2:-85262214 | None:intergenic |
| CTATTGCAGTCCCTCCTGAT+TGG | 0.417106 | 3_2:+85264906 | Msa0432940:CDS |
| TTCCAAGTGGTGTTCCTAGA+AGG | 0.420451 | 3_2:+85263762 | Msa0432940:CDS |
| GATCTTCTTTGGAACAAGAA+AGG | 0.422212 | 3_2:+85266059 | Msa0432940:three_prime_UTR |
| TTAAATGCTATAAACAAGAT+TGG | 0.422231 | 3_2:+85262646 | Msa0432940:CDS |
| ATTCATTTGAACTTTGAAAT+GGG | 0.423981 | 3_2:+85266133 | Msa0432940:three_prime_UTR |
| TGTGTTGCAGGGTTTGTGTT+TGG | 0.424941 | 3_2:+85263145 | Msa0432940:intron |
| TGGGTTTCAAATATATTAGT+AGG | 0.427061 | 3_2:+85266152 | Msa0432940:three_prime_UTR |
| AAAGCAAGATCATGGCGATA+TGG | 0.432577 | 3_2:+85263527 | Msa0432940:CDS |
| GATTGACACTTTAAAACAGT+TGG | 0.433116 | 3_2:-85262321 | None:intergenic |
| GCGCAATCTGTTCCGGCGTT+AGG | 0.439948 | 3_2:+85262673 | Msa0432940:CDS |
| TTTGGCAGTTCTTAGGAGGC+AGG | 0.441887 | 3_2:+85264425 | Msa0432940:CDS |
| CATTGAAATATTGAGATCAA+TGG | 0.443791 | 3_2:+85266182 | Msa0432940:three_prime_UTR |
| TGTAATGAAATCTGATACCA+AGG | 0.445347 | 3_2:+85264800 | Msa0432940:CDS |
| TGGATGAGATGACAACCAAC+AGG | 0.447214 | 3_2:+85265679 | Msa0432940:CDS |
| ACACCACTTGGAACGTCGTC+AGG | 0.447750 | 3_2:-85263752 | None:intergenic |
| ACTCTGATATGTGGTCTCCT+TGG | 0.450753 | 3_2:+85264351 | Msa0432940:CDS |
| TTGGCATCTACTGCCATTTG+TGG | 0.452678 | 3_2:+85262884 | Msa0432940:CDS |
| GTGTCTCTCTCATCTTTGAC+TGG | 0.455600 | 3_2:+85262139 | Msa0432940:five_prime_UTR |
| TGGTCATTTCCTTCCTAAGT+TGG | 0.457818 | 3_2:+85266202 | Msa0432940:three_prime_UTR |
| CTTTGTTCATTAACTCGGAC+TGG | 0.459027 | 3_2:-85264873 | None:intergenic |
| GTGAACTTCATGGCCAACTT+AGG | 0.459958 | 3_2:-85266215 | None:intergenic |
| GCAAAGAATATGTAGAAAGT+TGG | 0.461025 | 3_2:-85262785 | None:intergenic |
| AATTACTTGTAACGCCGGCT+TGG | 0.462717 | 3_2:-85265062 | None:intergenic |
| TGAGTGAATAATTCCACAAA+TGG | 0.463157 | 3_2:-85262897 | None:intergenic |
| AGATACACATGCCTCATTTG+TGG | 0.466869 | 3_2:+85265179 | Msa0432940:CDS |
| TCTGAGTATGAGGAAATTAT+CGG | 0.467463 | 3_2:+85265393 | Msa0432940:CDS |
| ACTTGATGCTTCTGAGTATG+AGG | 0.470967 | 3_2:+85265383 | Msa0432940:CDS |
| TAAGTATCTATGTATTTCTC+AGG | 0.471983 | 3_2:-85264846 | None:intergenic |
| TGCCAAACTCTTTGTATGCA+TGG | 0.474151 | 3_2:-85264409 | None:intergenic |
| AGAATTATGAGAAGGAAGAA+TGG | 0.475173 | 3_2:-85265312 | None:intergenic |
| AAGCTCTTTCTAGCTTGGGC+TGG | 0.476446 | 3_2:+85263025 | Msa0432940:CDS |
| TCTTTCTAGCTTGGGCTGGT+TGG | 0.476758 | 3_2:+85263029 | Msa0432940:CDS |
| ATCCATTGGTATACCGCCAT+TGG | 0.477208 | 3_2:-85263451 | None:intergenic |
| ATTCCAGCTTTGATGATAGC+AGG | 0.478040 | 3_2:+85264122 | Msa0432940:CDS |
| ATGTATTTCTCAGGATCAAA+AGG | 0.479705 | 3_2:-85264837 | None:intergenic |
| TAAATGCTATAAACAAGATT+GGG | 0.483293 | 3_2:+85262647 | Msa0432940:CDS |
| ATAAAGAGATGCAGGTTCCC+AGG | 0.487430 | 3_2:-85263801 | None:intergenic |
| CAGAAAATATGCCAACTGTA+AGG | 0.487488 | 3_2:-85265238 | None:intergenic |
| TCTTGAATGATTCCCTCAAA+TGG | 0.488582 | 3_2:-85262609 | None:intergenic |
| CAAGTAGGAAAACATCATAA+TGG | 0.491729 | 3_2:-85264223 | None:intergenic |
| AATCCAGCTATGGTCTTGAA+TGG | 0.492132 | 3_2:-85265210 | None:intergenic |
| AGGTTTATATTATTAGAGAT+AGG | 0.494556 | 3_2:-85266498 | None:intergenic |
| CTCCTAAAATCAACAAAGGT+TGG | 0.498920 | 3_2:-85262931 | None:intergenic |
| TCTTCCTGGGAATCAGTTCT+GGG | 0.500146 | 3_2:+85265013 | Msa0432940:CDS |
| GGAACAAATCTAGGAAAATG+AGG | 0.503426 | 3_2:-85262164 | None:intergenic |
| TAGGCATCTCCGTTATCAAA+AGG | 0.509147 | 3_2:+85264940 | Msa0432940:CDS |
| GTCCAGTGATAAAGAGATGC+AGG | 0.510174 | 3_2:-85263809 | None:intergenic |
| TAACATGGGAGCACCATTTG+AGG | 0.510206 | 3_2:+85262596 | Msa0432940:exon |
| GTTAGGTTGAGGGGAAAAGA+TGG | 0.511735 | 3_2:+85266248 | Msa0432940:three_prime_UTR |
| AACATGGGAGCACCATTTGA+GGG | 0.512969 | 3_2:+85262597 | Msa0432940:exon |
| TGTTCTGTTTCGGGGTCACA+TGG | 0.513903 | 3_2:+85265259 | Msa0432940:CDS |
| GATGCAGGTTCCCAGGGAAG+TGG | 0.514690 | 3_2:-85263794 | None:intergenic |
| TCATTCTTTGTTCATTAACT+CGG | 0.516096 | 3_2:-85264878 | None:intergenic |
| AAACCTGCTATCATCAAAGC+TGG | 0.519396 | 3_2:-85264125 | None:intergenic |
| TTTCGGAGAACAACTTAGTA+GGG | 0.520810 | 3_2:+85262829 | Msa0432940:CDS |
| AAGCATCAAGTTCCTGAAGA+TGG | 0.521659 | 3_2:-85265371 | None:intergenic |
| TAATTTCCTCTCACAGCTGA+AGG | 0.523428 | 3_2:-85262575 | None:intergenic |
| CAATTGGTGAAAGAGAATAA+TGG | 0.525184 | 3_2:+85266085 | Msa0432940:three_prime_UTR |
| GTACCATTCAAGACCATAGC+TGG | 0.525744 | 3_2:+85265207 | Msa0432940:CDS |
| CAGTACGTAGTATGTCACTC+AGG | 0.526268 | 3_2:+85265427 | Msa0432940:CDS |
| TCTACAAACTGCAGGATATG+TGG | 0.526801 | 3_2:+85264066 | Msa0432940:intron |
| AACCTGCATCTCTTTATCAC+TGG | 0.527373 | 3_2:+85263807 | Msa0432940:CDS |
| GTCCACAACACTACCATCAC+TGG | 0.527804 | 3_2:-85263710 | None:intergenic |
| AGGTTCCATTGCACAACCCT+TGG | 0.529505 | 3_2:-85264817 | None:intergenic |
| TCAAGTTCCTGAAGATGGTT+AGG | 0.529736 | 3_2:-85265366 | None:intergenic |
| CTATTATCGATAAACCAATC+AGG | 0.530355 | 3_2:-85264920 | None:intergenic |
| TGCCCCAAATATATAAATCA+CGG | 0.532143 | 3_2:-85264096 | None:intergenic |
| GCCAAACTCTTTGTATGCAT+GGG | 0.535179 | 3_2:-85264408 | None:intergenic |
| AAGTTTCAACTCTCCCCTGT+TGG | 0.535774 | 3_2:-85265694 | None:intergenic |
| ATTTGCAGCTGATCCGAAAG+AGG | 0.538031 | 3_2:+85264537 | Msa0432940:intron |
| CTTTCCCAGAACTGATTCCC+AGG | 0.538850 | 3_2:-85265017 | None:intergenic |
| GTGTATACAGCAAAAGAAAA+CGG | 0.540706 | 3_2:-85262262 | None:intergenic |
| GTACTAGGGCAGATTTGACC+TGG | 0.541341 | 3_2:+85265919 | Msa0432940:intron |
| TGTGGAAGGACTCCATTTGA+AGG | 0.542425 | 3_2:-85264381 | None:intergenic |
| AGCCCAAGCTAGAAAGAGCT+TGG | 0.543809 | 3_2:-85263023 | None:intergenic |
| AATTGTATCATCCTCTGAAG+AGG | 0.544738 | 3_2:+85265994 | Msa0432940:CDS |
| TTCCAGTGATGGTAGTGTTG+TGG | 0.547605 | 3_2:+85263708 | Msa0432940:CDS |
| TAAGTGTACATTATAACAGT+TGG | 0.548681 | 3_2:-85262962 | None:intergenic |
| TTGCAGGGTTTGTGTTTGGA+CGG | 0.549975 | 3_2:+85263149 | Msa0432940:intron |
| TCCTCTTCGTCACCCCAAGC+CGG | 0.550263 | 3_2:+85265048 | Msa0432940:CDS |
| GCCCCAAATATATAAATCAC+GGG | 0.551841 | 3_2:-85264095 | None:intergenic |
| ACCCGTGATTTATATATTTG+GGG | 0.552067 | 3_2:+85264094 | Msa0432940:CDS |
| TTCCAATGGCGGTATACCAA+TGG | 0.553783 | 3_2:+85263449 | Msa0432940:CDS |
| TCATAGCGTGGCTTCTCAGA+TGG | 0.555026 | 3_2:+85264160 | Msa0432940:CDS |
| TAGGAAAACATCATAATGGT+AGG | 0.556385 | 3_2:-85264219 | None:intergenic |
| AGAGTTTGGCAGTTCTTAGG+AGG | 0.556567 | 3_2:+85264421 | Msa0432940:CDS |
| AGCCTTCTAGGAACACCACT+TGG | 0.556893 | 3_2:-85263764 | None:intergenic |
| TAGGCTTGAATATCTTTGGA+AGG | 0.557117 | 3_2:-85265347 | None:intergenic |
| AAAGCAGAAAAGCAAGATCA+TGG | 0.557963 | 3_2:+85263519 | Msa0432940:CDS |
| GACATACTACGTACTGCAGA+TGG | 0.563507 | 3_2:-85265420 | None:intergenic |
| TGGATTTACAGCCTTACAGT+TGG | 0.564075 | 3_2:+85265227 | Msa0432940:CDS |
| CCACGTGATAGTGATAATGA+TGG | 0.565884 | 3_2:+85265624 | Msa0432940:CDS |
| ATGAGAAGGAAGAATGGTAG+CGG | 0.566015 | 3_2:-85265306 | None:intergenic |
| AATTGCAATTCCTCCGACGA+AGG | 0.567377 | 3_2:-85263428 | None:intergenic |
| CTGGGAATCAGTTCTGGGAA+AGG | 0.571040 | 3_2:+85265018 | Msa0432940:CDS |
| CTTGAGCACTGTAGAAACAT+TGG | 0.571302 | 3_2:+85262865 | Msa0432940:CDS |
| AATGACTGCGAGTAATCCAT+TGG | 0.572971 | 3_2:-85263465 | None:intergenic |
| GAACAAATCTAGGAAAATGA+GGG | 0.575461 | 3_2:-85262163 | None:intergenic |
| TGATACCAAGGGTTGTGCAA+TGG | 0.575807 | 3_2:+85264812 | Msa0432940:CDS |
| TGGTACTGTCTCCACAAATG+AGG | 0.576656 | 3_2:-85265190 | None:intergenic |
| CAGGAGGGACTGCAATAGGT+TGG | 0.576763 | 3_2:-85264901 | None:intergenic |
| CTAATATAGTAACAATGAAG+TGG | 0.577191 | 3_2:-85262455 | None:intergenic |
| TTTCCTCCTTCAGCTGTGAG+AGG | 0.577820 | 3_2:+85262569 | Msa0432940:five_prime_UTR |
| AATATTCAGACAGCACCTCC+AGG | 0.578164 | 3_2:-85265937 | None:intergenic |
| AAAGATGGTACGAGAGTGAA+AGG | 0.579697 | 3_2:+85266263 | Msa0432940:three_prime_UTR |
| GGAATCATTCAAGATGTCAA+AGG | 0.583983 | 3_2:+85262618 | Msa0432940:CDS |
| TATCCCCATAAAACCGAGGT+AGG | 0.584080 | 3_2:-85264966 | None:intergenic |
| AGATTATGGTGTTCCAGTGA+TGG | 0.584710 | 3_2:+85263697 | Msa0432940:CDS |
| CGGAGGAATTGCAATTCCAA+TGG | 0.585619 | 3_2:+85263435 | Msa0432940:CDS |
| ACATCATAATGGTAGGCAGA+TGG | 0.586423 | 3_2:-85264212 | None:intergenic |
| GCCGGCTTGGGGTGACGAAG+AGG | 0.586471 | 3_2:-85265049 | None:intergenic |
| GGACTCCATTTGAAGGAGGA+AGG | 0.587102 | 3_2:-85264374 | None:intergenic |
| ATGTAATAATGTGTAAAGAG+AGG | 0.587989 | 3_2:-85262480 | None:intergenic |
| CTAGATTTACAAGAATTGCA+GGG | 0.588173 | 3_2:+85263220 | Msa0432940:CDS |
| AGTCTTTAGACTCTGATATG+TGG | 0.592532 | 3_2:+85264342 | Msa0432940:intron |
| ACTTCATGGCCAACTTAGGA+AGG | 0.593342 | 3_2:-85266211 | None:intergenic |
| TGGCAATTGATAGTCTTCCT+GGG | 0.593727 | 3_2:+85265000 | Msa0432940:CDS |
| GAAAAGCGCCAAGGAATGCA+TGG | 0.594390 | 3_2:+85264565 | Msa0432940:CDS |
| TTTGCAGCTGATCCGAAAGA+GGG | 0.595342 | 3_2:+85264538 | Msa0432940:intron |
| TAAGGCTGTAAATCCAGCTA+TGG | 0.595564 | 3_2:-85265220 | None:intergenic |
| TAGTGATAATGATGGAAGCT+CGG | 0.596596 | 3_2:+85265632 | Msa0432940:CDS |
| TGTTCTCCGAAAGCAATGAC+CGG | 0.597888 | 3_2:-85262818 | None:intergenic |
| TACTCAATTACTTGTAACGC+CGG | 0.600590 | 3_2:-85265067 | None:intergenic |
| TTTCCTCTCACAGCTGAAGG+AGG | 0.600917 | 3_2:-85262572 | None:intergenic |
| GCTTGAATATCTTTGGAAGG+AGG | 0.601711 | 3_2:-85265344 | None:intergenic |
| AAGAGCTTGGTACCCAGTTG+AGG | 0.604187 | 3_2:-85263010 | None:intergenic |
| AGGCGAGTTCAGCACTCCCA+AGG | 0.604329 | 3_2:+85263397 | Msa0432940:CDS |
| TTTGAACCACAGGGACTGGT+AGG | 0.604416 | 3_2:+85263377 | Msa0432940:intron |
| GGAAACAATATTCCACCTAT+CGG | 0.607030 | 3_2:-85265285 | None:intergenic |
| ATTATTCACTCAATTATAGG+TGG | 0.609337 | 3_2:+85262908 | Msa0432940:CDS |
| CAAGGTTGAAAATCCTTCGT+CGG | 0.611167 | 3_2:+85263415 | Msa0432940:CDS |
| TGAATTAAATTACCTAACGC+CGG | 0.611783 | 3_2:-85262685 | None:intergenic |
| GGATGAGATGACAACCAACA+GGG | 0.624263 | 3_2:+85265680 | Msa0432940:CDS |
| TAAAGAGATGCAGGTTCCCA+GGG | 0.625123 | 3_2:-85263800 | None:intergenic |
| GTTCTCTGAGAATTATGAGA+AGG | 0.627074 | 3_2:-85265320 | None:intergenic |
| TTATCACTGGACAGTAGTGA+AGG | 0.627297 | 3_2:+85263820 | Msa0432940:CDS |
| GCTGTGAGAGGAAATTAACA+TGG | 0.632114 | 3_2:+85262581 | Msa0432940:exon |
| CAACTTAGTAGGGATACAGA+TGG | 0.633505 | 3_2:+85262839 | Msa0432940:CDS |
| TAGATTTACAAGAATTGCAG+GGG | 0.635506 | 3_2:+85263221 | Msa0432940:CDS |
| GTGAGAGCAGTCCTCTTCAG+AGG | 0.639145 | 3_2:-85266005 | None:intergenic |
| GGTTGAAAATCCTTCGTCGG+AGG | 0.639194 | 3_2:+85263418 | Msa0432940:CDS |
| GGGGTCACATGGATACCGAT+AGG | 0.640094 | 3_2:+85265270 | Msa0432940:CDS |
| TTTGTATGCATGGGAGACTG+TGG | 0.640494 | 3_2:-85264399 | None:intergenic |
| TTCAATTCAGGGAGGCTACG+AGG | 0.640834 | 3_2:+85263665 | Msa0432940:intron |
| TATCAAAAGGATACCTACCT+CGG | 0.648218 | 3_2:+85264953 | Msa0432940:CDS |
| TTATCGATAAACCAATCAGG+AGG | 0.649930 | 3_2:-85264917 | None:intergenic |
| TTACTTGTAACGCCGGCTTG+GGG | 0.651277 | 3_2:-85265060 | None:intergenic |
| CAAACTGCAGGATATGTGGA+AGG | 0.653071 | 3_2:+85264070 | Msa0432940:intron |
| GCAACTCCTAAAATCAACAA+AGG | 0.653603 | 3_2:-85262935 | None:intergenic |
| GAAAGCAATGACCGGAAGCG+CGG | 0.656263 | 3_2:-85262810 | None:intergenic |
| CATTTGAAGGAGGAAGGCCA+AGG | 0.657670 | 3_2:-85264368 | None:intergenic |
| GTCACATGGATACCGATAGG+TGG | 0.659868 | 3_2:+85265273 | Msa0432940:CDS |
| AACAGACCATTATTCCAAGT+AGG | 0.662683 | 3_2:-85264238 | None:intergenic |
| TATCGATAAACCAATCAGGA+GGG | 0.666981 | 3_2:-85264916 | None:intergenic |
| ATGCCTGACGACGTTCCAAG+TGG | 0.671559 | 3_2:+85263749 | Msa0432940:CDS |
| AGGAATTGCAATTCCAATGG+CGG | 0.673504 | 3_2:+85263438 | Msa0432940:CDS |
| AGTACGTAGTATGTCACTCA+GGG | 0.676575 | 3_2:+85265428 | Msa0432940:CDS |
| GGAAGGACTCCATTTGAAGG+AGG | 0.676893 | 3_2:-85264378 | None:intergenic |
| TATGCATGGGAGACTGTGGA+AGG | 0.677272 | 3_2:-85264395 | None:intergenic |
| GTAATGAAATCTGATACCAA+GGG | 0.682765 | 3_2:+85264801 | Msa0432940:CDS |
| CTGTGAGAGGAAATTAACAT+GGG | 0.686817 | 3_2:+85262582 | Msa0432940:exon |
| CTAGGGCAGATTTGACCTGG+AGG | 0.687491 | 3_2:+85265922 | Msa0432940:intron |
| AAAATATCCCCATAAAACCG+AGG | 0.688473 | 3_2:-85264970 | None:intergenic |
| GAGGGTTGTGAAAAGCGCCA+AGG | 0.688617 | 3_2:+85264556 | Msa0432940:CDS |
| CCTAACAATACATACAGTAG+GGG | 0.689459 | 3_2:-85264654 | None:intergenic |
| GGTACGAGAGTGAAAGGACA+AGG | 0.690185 | 3_2:+85266269 | Msa0432940:three_prime_UTR |
| CCATCATTATCACTATCACG+TGG | 0.692316 | 3_2:-85265624 | None:intergenic |
| AGTGACGTTTGTGAATACTC+AGG | 0.702970 | 3_2:-85266454 | None:intergenic |
| CGTTTGTGAATACTCAGGTG+TGG | 0.711020 | 3_2:-85266449 | None:intergenic |
| GATGAGATGACAACCAACAG+GGG | 0.715278 | 3_2:+85265681 | Msa0432940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTAAAATTAAAATAT+AGG | - | chr3_2:85262227-85262246 | None:intergenic | 0.0% |
| !! | ATTAAAATATAGGAAATATT+GGG | - | chr3_2:85262217-85262236 | None:intergenic | 10.0% |
| !! | AATTAAAATATAGGAAATAT+TGG | - | chr3_2:85262218-85262237 | None:intergenic | 10.0% |
| !!! | TAAATGCTTAAATATATTTT+TGG | - | chr3_2:85265529-85265548 | None:intergenic | 10.0% |
| !!! | AATAATTGTGTTTTATTGTA+TGG | - | chr3_2:85262188-85262207 | None:intergenic | 15.0% |
| !! | ATTCTTTAAATTTCTGTTTA+AGG | + | chr3_2:85263071-85263090 | Msa0432940:intron | 15.0% |
| !! | TTCTTTAAATTTCTGTTTAA+GGG | + | chr3_2:85263072-85263091 | Msa0432940:intron | 15.0% |
| !! | AAATACATTGTGTATTTAAT+TGG | + | chr3_2:85263333-85263352 | Msa0432940:intron | 15.0% |
| !!! | TCTGAATATTACAATTTTTT+AGG | + | chr3_2:85265950-85265969 | Msa0432940:CDS | 15.0% |
| !! | AAAAAACTTTATTGGTATTA+TGG | - | chr3_2:85266389-85266408 | None:intergenic | 15.0% |
| !! | TTAAATGCTATAAACAAGAT+TGG | + | chr3_2:85262646-85262665 | Msa0432940:CDS | 20.0% |
| !! | TAAATGCTATAAACAAGATT+GGG | + | chr3_2:85262647-85262666 | Msa0432940:CDS | 20.0% |
| !! | TAATAATAATGACAGCATAT+TGG | + | chr3_2:85262760-85262779 | Msa0432940:intron | 20.0% |
| !!! | TTCTTATTTTTGTTAGAAAG+AGG | - | chr3_2:85263314-85263333 | None:intergenic | 20.0% |
| !! | CCAAAAAAAAAAATTGCTTA+AGG | - | chr3_2:85263592-85263611 | None:intergenic | 20.0% |
| !!! | CCTTAAGCAATTTTTTTTTT+TGG | + | chr3_2:85263589-85263608 | Msa0432940:intron | 20.0% |
| !!! | TGTATAAAAAGAAAGCATTT+TGG | - | chr3_2:85263883-85263902 | None:intergenic | 20.0% |
| !! | ATAACATAAATCCAAATTCT+AGG | - | chr3_2:85264277-85264296 | None:intergenic | 20.0% |
| !!! | GTTGGTTTTTAAATTATAAC+AGG | + | chr3_2:85264749-85264768 | Msa0432940:intron | 20.0% |
| !! | ATTATAACAGGTTAAAGAAT+TGG | + | chr3_2:85264761-85264780 | Msa0432940:intron | 20.0% |
| !! | CTACATTGAAAAAAAAGTTT+AGG | - | chr3_2:85265101-85265120 | None:intergenic | 20.0% |
| !! | ATGAATCTTAAAACTTAAGA+GGG | - | chr3_2:85265855-85265874 | None:intergenic | 20.0% |
| !! | AATGAATCTTAAAACTTAAG+AGG | - | chr3_2:85265856-85265875 | None:intergenic | 20.0% |
| !!! | AATTCATTTGAACTTTGAAA+TGG | + | chr3_2:85266132-85266151 | Msa0432940:three_prime_UTR | 20.0% |
| !!! | ATTCATTTGAACTTTGAAAT+GGG | + | chr3_2:85266133-85266152 | Msa0432940:three_prime_UTR | 20.0% |
| ! | TTATTGTATGGAACAAATCT+AGG | - | chr3_2:85262176-85262195 | None:intergenic | 25.0% |
| ! | CTAATATAGTAACAATGAAG+TGG | - | chr3_2:85262458-85262477 | None:intergenic | 25.0% |
| ! | ATGTAATAATGTGTAAAGAG+AGG | - | chr3_2:85262483-85262502 | None:intergenic | 25.0% |
| ! | GGAATTATTCACTCAATTAT+AGG | + | chr3_2:85262905-85262924 | Msa0432940:CDS | 25.0% |
| ! | ATTATTCACTCAATTATAGG+TGG | + | chr3_2:85262908-85262927 | Msa0432940:CDS | 25.0% |
| ! | TAAGTGTACATTATAACAGT+TGG | - | chr3_2:85262965-85262984 | None:intergenic | 25.0% |
| ! | AATGCAAGAATAAAGATCAT+TGG | - | chr3_2:85263646-85263665 | None:intergenic | 25.0% |
| ! | TTATTCTTGCATTTCAATTC+AGG | + | chr3_2:85263653-85263672 | Msa0432940:intron | 25.0% |
| ! | TATTCTTGCATTTCAATTCA+GGG | + | chr3_2:85263654-85263673 | Msa0432940:intron | 25.0% |
| !!! | AGTCGTGATCATTTTAATTT+AGG | + | chr3_2:85264011-85264030 | Msa0432940:intron | 25.0% |
| ! | GTTAGACTTATATGGATATT+AGG | - | chr3_2:85264042-85264061 | None:intergenic | 25.0% |
| ! | TACCCGTGATTTATATATTT+GGG | + | chr3_2:85264093-85264112 | Msa0432940:CDS | 25.0% |
| !!! | TTTGTTTTCTTCCTAGAATT+TGG | + | chr3_2:85264263-85264282 | Msa0432940:intron | 25.0% |
| ! | GATTGACATAATTATCTCTA+TGG | + | chr3_2:85264317-85264336 | Msa0432940:intron | 25.0% |
| ! | TAAGTATCTATGTATTTCTC+AGG | - | chr3_2:85264849-85264868 | None:intergenic | 25.0% |
| ! | TCATTCTTTGTTCATTAACT+CGG | - | chr3_2:85264881-85264900 | None:intergenic | 25.0% |
| !!! | AATTTTTTAGGATGCAGAAA+AGG | + | chr3_2:85265962-85265981 | Msa0432940:CDS | 25.0% |
| ! | TGGGTTTCAAATATATTAGT+AGG | + | chr3_2:85266152-85266171 | Msa0432940:three_prime_UTR | 25.0% |
| ! | CATTGAAATATTGAGATCAA+TGG | + | chr3_2:85266182-85266201 | Msa0432940:three_prime_UTR | 25.0% |
| !!! | TACCAATAAAGTTTTTTGAG+AGG | + | chr3_2:85266392-85266411 | Msa0432940:three_prime_UTR | 25.0% |
| ! | ATCCTCTCAAAAAACTTTAT+TGG | - | chr3_2:85266397-85266416 | None:intergenic | 25.0% |
| GAACAAATCTAGGAAAATGA+GGG | - | chr3_2:85262166-85262185 | None:intergenic | 30.0% | |
| GTGTATACAGCAAAAGAAAA+CGG | - | chr3_2:85262265-85262284 | None:intergenic | 30.0% | |
| !! | GATTGACACTTTAAAACAGT+TGG | - | chr3_2:85262324-85262343 | None:intergenic | 30.0% |
| ATGGAGAATTGACAGAAAAA+AGG | - | chr3_2:85262375-85262394 | None:intergenic | 30.0% | |
| TGAATTAAATTACCTAACGC+CGG | - | chr3_2:85262688-85262707 | None:intergenic | 30.0% | |
| GCAAAGAATATGTAGAAAGT+TGG | - | chr3_2:85262788-85262807 | None:intergenic | 30.0% | |
| TGAGTGAATAATTCCACAAA+TGG | - | chr3_2:85262900-85262919 | None:intergenic | 30.0% | |
| ! | ACGAACATTTTAGATCGATA+CGG | - | chr3_2:85263122-85263141 | None:intergenic | 30.0% |
| ACTAGATTTACAAGAATTGC+AGG | + | chr3_2:85263219-85263238 | Msa0432940:CDS | 30.0% | |
| CTAGATTTACAAGAATTGCA+GGG | + | chr3_2:85263220-85263239 | Msa0432940:CDS | 30.0% | |
| TAGATTTACAAGAATTGCAG+GGG | + | chr3_2:85263221-85263240 | Msa0432940:CDS | 30.0% | |
| TTTCTTTCAAGAGGCTATAA+AGG | + | chr3_2:85263272-85263291 | Msa0432940:CDS | 30.0% | |
| ACAAAAATTGTTTGAACCAC+AGG | + | chr3_2:85263367-85263386 | Msa0432940:intron | 30.0% | |
| CAAAAATTGTTTGAACCACA+GGG | + | chr3_2:85263368-85263387 | Msa0432940:intron | 30.0% | |
| !! | CTAATGTGGTATTGGATTTT+TGG | - | chr3_2:85263568-85263587 | None:intergenic | 30.0% |
| AAATTGCTTAAGGTCTAATG+TGG | - | chr3_2:85263582-85263601 | None:intergenic | 30.0% | |
| TAAAGATCATTGGAGTGATA+AGG | - | chr3_2:85263636-85263655 | None:intergenic | 30.0% | |
| TAGAAGCTGTTAGACTTATA+TGG | - | chr3_2:85264050-85264069 | None:intergenic | 30.0% | |
| GTACCCGTGATTTATATATT+TGG | + | chr3_2:85264092-85264111 | Msa0432940:CDS | 30.0% | |
| ACCCGTGATTTATATATTTG+GGG | + | chr3_2:85264094-85264113 | Msa0432940:CDS | 30.0% | |
| TGCCCCAAATATATAAATCA+CGG | - | chr3_2:85264099-85264118 | None:intergenic | 30.0% | |
| TAGGAAAACATCATAATGGT+AGG | - | chr3_2:85264222-85264241 | None:intergenic | 30.0% | |
| CAAGTAGGAAAACATCATAA+TGG | - | chr3_2:85264226-85264245 | None:intergenic | 30.0% | |
| ! | CATTATGATGTTTTCCTACT+TGG | + | chr3_2:85264224-85264243 | Msa0432940:CDS | 30.0% |
| ! | TGTTTTCCTACTTGGAATAA+TGG | + | chr3_2:85264232-85264251 | Msa0432940:CDS | 30.0% |
| ! | CATCGATATATTTTGCATCA+AGG | + | chr3_2:85264452-85264471 | Msa0432940:intron | 30.0% |
| TTGAGAAGAAATTAAGAACC+AGG | - | chr3_2:85264480-85264499 | None:intergenic | 30.0% | |
| ! | TTTTCCATATAATTCAGAGC+TGG | - | chr3_2:85264603-85264622 | None:intergenic | 30.0% |
| ACCTAACAATACATACAGTA+GGG | - | chr3_2:85264658-85264677 | None:intergenic | 30.0% | |
| AACCTAACAATACATACAGT+AGG | - | chr3_2:85264659-85264678 | None:intergenic | 30.0% | |
| GATACTAATACACATAGTGT+TGG | + | chr3_2:85264731-85264750 | Msa0432940:intron | 30.0% | |
| TGTAATGAAATCTGATACCA+AGG | + | chr3_2:85264800-85264819 | Msa0432940:CDS | 30.0% | |
| GTAATGAAATCTGATACCAA+GGG | + | chr3_2:85264801-85264820 | Msa0432940:CDS | 30.0% | |
| ATGTATTTCTCAGGATCAAA+AGG | - | chr3_2:85264840-85264859 | None:intergenic | 30.0% | |
| CTATTATCGATAAACCAATC+AGG | - | chr3_2:85264923-85264942 | None:intergenic | 30.0% | |
| !! | CTGATTGGTTTATCGATAAT+AGG | + | chr3_2:85264921-85264940 | Msa0432940:CDS | 30.0% |
| GAAAAAAAAGTTTAGGCACA+AGG | - | chr3_2:85265094-85265113 | None:intergenic | 30.0% | |
| ! | TGTCATTGTCTTGTATGTTT+TGG | + | chr3_2:85265143-85265162 | Msa0432940:intron | 30.0% |
| ! | GTCATTGTCTTGTATGTTTT+GGG | + | chr3_2:85265144-85265163 | Msa0432940:intron | 30.0% |
| ! | GCATATTTTCTGTTCTGTTT+CGG | + | chr3_2:85265249-85265268 | Msa0432940:CDS | 30.0% |
| ! | CATATTTTCTGTTCTGTTTC+GGG | + | chr3_2:85265250-85265269 | Msa0432940:CDS | 30.0% |
| ! | ATATTTTCTGTTCTGTTTCG+GGG | + | chr3_2:85265251-85265270 | Msa0432940:CDS | 30.0% |
| AGAATTATGAGAAGGAAGAA+TGG | - | chr3_2:85265315-85265334 | None:intergenic | 30.0% | |
| TCTGAGTATGAGGAAATTAT+CGG | + | chr3_2:85265393-85265412 | Msa0432940:CDS | 30.0% | |
| TCCAACTTAGGATTTGAATT+TGG | + | chr3_2:85265584-85265603 | Msa0432940:intron | 30.0% | |
| ACCAAATTCAAATCCTAAGT+TGG | - | chr3_2:85265588-85265607 | None:intergenic | 30.0% | |
| TTACTATGATGCAGAGATAT+TGG | + | chr3_2:85265659-85265678 | Msa0432940:CDS | 30.0% | |
| ! | TTATGCTTGTGTTTTGTACT+AGG | + | chr3_2:85265904-85265923 | Msa0432940:intron | 30.0% |
| ! | TATGCTTGTGTTTTGTACTA+GGG | + | chr3_2:85265905-85265924 | Msa0432940:intron | 30.0% |
| CAATTGGTGAAAGAGAATAA+TGG | + | chr3_2:85266085-85266104 | Msa0432940:three_prime_UTR | 30.0% | |
| GAAAGAGAATAATGGCAAAA+AGG | + | chr3_2:85266093-85266112 | Msa0432940:three_prime_UTR | 30.0% | |
| !!! | TCCTTTTTTTGTGAACTTCA+TGG | - | chr3_2:85266228-85266247 | None:intergenic | 30.0% |
| AGTTCACAAAAAAAGGAGTT+AGG | + | chr3_2:85266231-85266250 | Msa0432940:three_prime_UTR | 30.0% | |
| !! | AAAAAAAGGAGTTAGGTTGA+GGG | + | chr3_2:85266238-85266257 | Msa0432940:three_prime_UTR | 30.0% |
| GGACAAGGAAAAAAAAAAGA+CGG | + | chr3_2:85266284-85266303 | Msa0432940:three_prime_UTR | 30.0% | |
| GACAAGGAAAAAAAAAAGAC+GGG | + | chr3_2:85266285-85266304 | Msa0432940:three_prime_UTR | 30.0% | |
| ACAAGGAAAAAAAAAAGACG+GGG | + | chr3_2:85266286-85266305 | Msa0432940:three_prime_UTR | 30.0% | |
| GGAACAAATCTAGGAAAATG+AGG | - | chr3_2:85262167-85262186 | None:intergenic | 35.0% | |
| ATGAATGAAAACGCGTTTGA+TGG | - | chr3_2:85262394-85262413 | None:intergenic | 35.0% | |
| CTGTGAGAGGAAATTAACAT+GGG | + | chr3_2:85262582-85262601 | Msa0432940:exon | 35.0% | |
| TCTTGAATGATTCCCTCAAA+TGG | - | chr3_2:85262612-85262631 | None:intergenic | 35.0% | |
| GGAATCATTCAAGATGTCAA+AGG | + | chr3_2:85262618-85262637 | Msa0432940:CDS | 35.0% | |
| TTTCGGAGAACAACTTAGTA+GGG | + | chr3_2:85262829-85262848 | Msa0432940:CDS | 35.0% | |
| CTCCTAAAATCAACAAAGGT+TGG | - | chr3_2:85262934-85262953 | None:intergenic | 35.0% | |
| GCAACTCCTAAAATCAACAA+AGG | - | chr3_2:85262938-85262957 | None:intergenic | 35.0% | |
| TGCAAAAATACACCTCAACT+GGG | + | chr3_2:85262998-85263017 | Msa0432940:CDS | 35.0% | |
| AATGTTCGTATTTGTGTTGC+AGG | + | chr3_2:85263133-85263152 | Msa0432940:intron | 35.0% | |
| ATGTTCGTATTTGTGTTGCA+GGG | + | chr3_2:85263134-85263153 | Msa0432940:intron | 35.0% | |
| ! | CACTGTTCTTTTCTTTCAAG+AGG | + | chr3_2:85263263-85263282 | Msa0432940:CDS | 35.0% |
| !! | TCGCAGTCATTTTCTCTTTT+GGG | + | chr3_2:85263477-85263496 | Msa0432940:CDS | 35.0% |
| AAAGCAGAAAAGCAAGATCA+TGG | + | chr3_2:85263519-85263538 | Msa0432940:CDS | 35.0% | |
| CTTAAGGTCTAATGTGGTAT+TGG | - | chr3_2:85263576-85263595 | None:intergenic | 35.0% | |
| CTCTACAGACATACATTACA+TGG | - | chr3_2:85263935-85263954 | None:intergenic | 35.0% | |
| ! | GTATGTCTGTAGAGTATTCA+AGG | + | chr3_2:85263941-85263960 | Msa0432940:intron | 35.0% |
| CATTAACACGTGTCATACAT+CGG | - | chr3_2:85263972-85263991 | None:intergenic | 35.0% | |
| GCCCCAAATATATAAATCAC+GGG | - | chr3_2:85264098-85264117 | None:intergenic | 35.0% | |
| !!! | ATACTTTTTCGATCATAGCG+TGG | + | chr3_2:85264148-85264167 | Msa0432940:CDS | 35.0% |
| AACAGACCATTATTCCAAGT+AGG | - | chr3_2:85264241-85264260 | None:intergenic | 35.0% | |
| AGTCTTTAGACTCTGATATG+TGG | + | chr3_2:85264342-85264361 | Msa0432940:intron | 35.0% | |
| !! | AGTACCAGCTCTGAATTATA+TGG | + | chr3_2:85264596-85264615 | Msa0432940:CDS | 35.0% |
| CCTAACAATACATACAGTAG+GGG | - | chr3_2:85264657-85264676 | None:intergenic | 35.0% | |
| TATCGATAAACCAATCAGGA+GGG | - | chr3_2:85264919-85264938 | None:intergenic | 35.0% | |
| TTATCGATAAACCAATCAGG+AGG | - | chr3_2:85264920-85264939 | None:intergenic | 35.0% | |
| ! | GGTAGGTATCCTTTTGATAA+CGG | - | chr3_2:85264952-85264971 | None:intergenic | 35.0% |
| TATCAAAAGGATACCTACCT+CGG | + | chr3_2:85264953-85264972 | Msa0432940:CDS | 35.0% | |
| AAAATATCCCCATAAAACCG+AGG | - | chr3_2:85264973-85264992 | None:intergenic | 35.0% | |
| ! | ATGGGGATATTTTGCTTACA+TGG | + | chr3_2:85264980-85264999 | Msa0432940:CDS | 35.0% |
| TACTCAATTACTTGTAACGC+CGG | - | chr3_2:85265070-85265089 | None:intergenic | 35.0% | |
| CAGAAAATATGCCAACTGTA+AGG | - | chr3_2:85265241-85265260 | None:intergenic | 35.0% | |
| GGAAACAATATTCCACCTAT+CGG | - | chr3_2:85265288-85265307 | None:intergenic | 35.0% | |
| ! | GTTCTCTGAGAATTATGAGA+AGG | - | chr3_2:85265323-85265342 | None:intergenic | 35.0% |
| TAGGCTTGAATATCTTTGGA+AGG | - | chr3_2:85265350-85265369 | None:intergenic | 35.0% | |
| TGGTTAGGCTTGAATATCTT+TGG | - | chr3_2:85265354-85265373 | None:intergenic | 35.0% | |
| ! | AAATCCTAAGTTGGAAAGCT+TGG | - | chr3_2:85265579-85265598 | None:intergenic | 35.0% |
| GGATTTGAATTTGGTTGATC+AGG | + | chr3_2:85265593-85265612 | Msa0432940:intron | 35.0% | |
| TGAATTTGGTTGATCAGGAT+AGG | + | chr3_2:85265598-85265617 | Msa0432940:intron | 35.0% | |
| GAATTTGGTTGATCAGGATA+GGG | + | chr3_2:85265599-85265618 | Msa0432940:intron | 35.0% | |
| ! | TAGTGATAATGATGGAAGCT+CGG | + | chr3_2:85265632-85265651 | Msa0432940:CDS | 35.0% |
| ! | AATTGTATCATCCTCTGAAG+AGG | + | chr3_2:85265994-85266013 | Msa0432940:CDS | 35.0% |
| AGCTTGAAGATGATCTTCTT+TGG | + | chr3_2:85266048-85266067 | Msa0432940:exon | 35.0% | |
| !! | GATCTTCTTTGGAACAAGAA+AGG | + | chr3_2:85266059-85266078 | Msa0432940:three_prime_UTR | 35.0% |
| GGAACAAGAAAGGATTCAAT+TGG | + | chr3_2:85266069-85266088 | Msa0432940:three_prime_UTR | 35.0% | |
| GGCAAAAAGGAACAAAGATA+TGG | + | chr3_2:85266106-85266125 | Msa0432940:three_prime_UTR | 35.0% | |
| GCCATGAAGTTCACAAAAAA+AGG | + | chr3_2:85266224-85266243 | Msa0432940:three_prime_UTR | 35.0% | |
| ! | CAAAAAAAGGAGTTAGGTTG+AGG | + | chr3_2:85266237-85266256 | Msa0432940:three_prime_UTR | 35.0% |
| !! | AAAAAAGGAGTTAGGTTGAG+GGG | + | chr3_2:85266239-85266258 | Msa0432940:three_prime_UTR | 35.0% |
| CAAGGAAAAAAAAAAGACGG+GGG | + | chr3_2:85266287-85266306 | Msa0432940:three_prime_UTR | 35.0% | |
| TAATTTCCTCTCACAGCTGA+AGG | - | chr3_2:85262578-85262597 | None:intergenic | 40.0% | |
| GCTGTGAGAGGAAATTAACA+TGG | + | chr3_2:85262581-85262600 | Msa0432940:exon | 40.0% | |
| CTTTCGGAGAACAACTTAGT+AGG | + | chr3_2:85262828-85262847 | Msa0432940:CDS | 40.0% | |
| CAACTTAGTAGGGATACAGA+TGG | + | chr3_2:85262839-85262858 | Msa0432940:CDS | 40.0% | |
| ! | CTTGAGCACTGTAGAAACAT+TGG | + | chr3_2:85262865-85262884 | Msa0432940:CDS | 40.0% |
| !!! | GGCCAACCTTTGTTGATTTT+AGG | + | chr3_2:85262929-85262948 | Msa0432940:CDS | 40.0% |
| CTGCAAAAATACACCTCAAC+TGG | + | chr3_2:85262997-85263016 | Msa0432940:CDS | 40.0% | |
| !! | TACCAAGCTCTTTCTAGCTT+GGG | + | chr3_2:85263021-85263040 | Msa0432940:CDS | 40.0% |
| AGAATTGCAGGGGAGTTATT+TGG | + | chr3_2:85263231-85263250 | Msa0432940:CDS | 40.0% | |
| ! | GACGAAGGATTTTCAACCTT+GGG | - | chr3_2:85263416-85263435 | None:intergenic | 40.0% |
| CAAGGTTGAAAATCCTTCGT+CGG | + | chr3_2:85263415-85263434 | Msa0432940:CDS | 40.0% | |
| AGGAATTGCAATTCCAATGG+CGG | + | chr3_2:85263438-85263457 | Msa0432940:CDS | 40.0% | |
| AATGACTGCGAGTAATCCAT+TGG | - | chr3_2:85263468-85263487 | None:intergenic | 40.0% | |
| !! | CTCGCAGTCATTTTCTCTTT+TGG | + | chr3_2:85263476-85263495 | Msa0432940:CDS | 40.0% |
| AAAGCAAGATCATGGCGATA+TGG | + | chr3_2:85263527-85263546 | Msa0432940:CDS | 40.0% | |
| TCTTGCATTTCAATTCAGGG+AGG | + | chr3_2:85263657-85263676 | Msa0432940:intron | 40.0% | |
| !! | CGAGGCTTTATTGCAGATTA+TGG | + | chr3_2:85263683-85263702 | Msa0432940:CDS | 40.0% |
| AGATTATGGTGTTCCAGTGA+TGG | + | chr3_2:85263697-85263716 | Msa0432940:CDS | 40.0% | |
| AACCTGCATCTCTTTATCAC+TGG | + | chr3_2:85263807-85263826 | Msa0432940:CDS | 40.0% | |
| TTATCACTGGACAGTAGTGA+AGG | + | chr3_2:85263820-85263839 | Msa0432940:CDS | 40.0% | |
| TAACAGCTTCTACAAACTGC+AGG | + | chr3_2:85264058-85264077 | Msa0432940:intron | 40.0% | |
| TCTACAAACTGCAGGATATG+TGG | + | chr3_2:85264066-85264085 | Msa0432940:intron | 40.0% | |
| ! | ATTCCAGCTTTGATGATAGC+AGG | + | chr3_2:85264122-85264141 | Msa0432940:CDS | 40.0% |
| AAACCTGCTATCATCAAAGC+TGG | - | chr3_2:85264128-85264147 | None:intergenic | 40.0% | |
| ACATCATAATGGTAGGCAGA+TGG | - | chr3_2:85264215-85264234 | None:intergenic | 40.0% | |
| TCCCATGCATACAAAGAGTT+TGG | + | chr3_2:85264407-85264426 | Msa0432940:CDS | 40.0% | |
| GCCAAACTCTTTGTATGCAT+GGG | - | chr3_2:85264411-85264430 | None:intergenic | 40.0% | |
| TGCCAAACTCTTTGTATGCA+TGG | - | chr3_2:85264412-85264431 | None:intergenic | 40.0% | |
| CAAAGAGTTTGGCAGTTCTT+AGG | + | chr3_2:85264418-85264437 | Msa0432940:CDS | 40.0% | |
| ! | ATATTTTGCATCAAGGCTCC+TGG | + | chr3_2:85264459-85264478 | Msa0432940:intron | 40.0% |
| CAAATCAATGGTGCAACACA+AGG | - | chr3_2:85264522-85264541 | None:intergenic | 40.0% | |
| GCAAGCTGTGTTCATTGAAA+TGG | + | chr3_2:85264625-85264644 | Msa0432940:CDS | 40.0% | |
| CCCCTACTGTATGTATTGTT+AGG | + | chr3_2:85264654-85264673 | Msa0432940:intron | 40.0% | |
| CTTTGTTCATTAACTCGGAC+TGG | - | chr3_2:85264876-85264895 | None:intergenic | 40.0% | |
| TAGGCATCTCCGTTATCAAA+AGG | + | chr3_2:85264940-85264959 | Msa0432940:CDS | 40.0% | |
| !! | GATACCTACCTCGGTTTTAT+GGG | + | chr3_2:85264962-85264981 | Msa0432940:CDS | 40.0% |
| !! | ATACCTACCTCGGTTTTATG+GGG | + | chr3_2:85264963-85264982 | Msa0432940:CDS | 40.0% |
| ! | ATGGCAATTGATAGTCTTCC+TGG | + | chr3_2:85264999-85265018 | Msa0432940:CDS | 40.0% |
| ! | TGGCAATTGATAGTCTTCCT+GGG | + | chr3_2:85265000-85265019 | Msa0432940:CDS | 40.0% |
| AGATACACATGCCTCATTTG+TGG | + | chr3_2:85265179-85265198 | Msa0432940:CDS | 40.0% | |
| ! | AATCCAGCTATGGTCTTGAA+TGG | - | chr3_2:85265213-85265232 | None:intergenic | 40.0% |
| TAAGGCTGTAAATCCAGCTA+TGG | - | chr3_2:85265223-85265242 | None:intergenic | 40.0% | |
| TGGATTTACAGCCTTACAGT+TGG | + | chr3_2:85265227-85265246 | Msa0432940:CDS | 40.0% | |
| ATGAGAAGGAAGAATGGTAG+CGG | - | chr3_2:85265309-85265328 | None:intergenic | 40.0% | |
| ! | GCTTGAATATCTTTGGAAGG+AGG | - | chr3_2:85265347-85265366 | None:intergenic | 40.0% |
| ATTCAAGCCTAACCATCTTC+AGG | + | chr3_2:85265359-85265378 | Msa0432940:CDS | 40.0% | |
| TCAAGTTCCTGAAGATGGTT+AGG | - | chr3_2:85265369-85265388 | None:intergenic | 40.0% | |
| AAGCATCAAGTTCCTGAAGA+TGG | - | chr3_2:85265374-85265393 | None:intergenic | 40.0% | |
| ACTTGATGCTTCTGAGTATG+AGG | + | chr3_2:85265383-85265402 | Msa0432940:CDS | 40.0% | |
| AGTACGTAGTATGTCACTCA+GGG | + | chr3_2:85265428-85265447 | Msa0432940:CDS | 40.0% | |
| TACTCCAAGCTTTCCAACTT+AGG | + | chr3_2:85265572-85265591 | Msa0432940:intron | 40.0% | |
| CCATCATTATCACTATCACG+TGG | - | chr3_2:85265627-85265646 | None:intergenic | 40.0% | |
| ! | CCACGTGATAGTGATAATGA+TGG | + | chr3_2:85265624-85265643 | Msa0432940:CDS | 40.0% |
| GATCATTGAAGCTGTTACTG+CGG | - | chr3_2:85265746-85265765 | None:intergenic | 40.0% | |
| GATCATTGAAGCTGTTACTG+TGG | - | chr3_2:85265746-85265765 | None:intergenic | 40.0% | |
| CTTCATTGAAGCTGTTACTG+TGG | - | chr3_2:85265800-85265819 | None:intergenic | 40.0% | |
| TGGTCATTTCCTTCCTAAGT+TGG | + | chr3_2:85266202-85266221 | Msa0432940:three_prime_UTR | 40.0% | |
| AAAGATGGTACGAGAGTGAA+AGG | + | chr3_2:85266263-85266282 | Msa0432940:three_prime_UTR | 40.0% | |
| AGTGACGTTTGTGAATACTC+AGG | - | chr3_2:85266457-85266476 | None:intergenic | 40.0% | |
| GTGTCTCTCTCATCTTTGAC+TGG | + | chr3_2:85262139-85262158 | Msa0432940:five_prime_UTR | 45.0% | |
| !! | TAACATGGGAGCACCATTTG+AGG | + | chr3_2:85262596-85262615 | Msa0432940:exon | 45.0% |
| !! | AACATGGGAGCACCATTTGA+GGG | + | chr3_2:85262597-85262616 | Msa0432940:exon | 45.0% |
| TGTTCTCCGAAAGCAATGAC+CGG | - | chr3_2:85262821-85262840 | None:intergenic | 45.0% | |
| ! | TTGGCATCTACTGCCATTTG+TGG | + | chr3_2:85262884-85262903 | Msa0432940:CDS | 45.0% |
| !! | GTACCAAGCTCTTTCTAGCT+TGG | + | chr3_2:85263020-85263039 | Msa0432940:CDS | 45.0% |
| TGTGTTGCAGGGTTTGTGTT+TGG | + | chr3_2:85263145-85263164 | Msa0432940:intron | 45.0% | |
| TTGCAGGGTTTGTGTTTGGA+CGG | + | chr3_2:85263149-85263168 | Msa0432940:intron | 45.0% | |
| ATTGTTTGAACCACAGGGAC+TGG | + | chr3_2:85263373-85263392 | Msa0432940:intron | 45.0% | |
| ! | CGACGAAGGATTTTCAACCT+TGG | - | chr3_2:85263417-85263436 | None:intergenic | 45.0% |
| AATTGCAATTCCTCCGACGA+AGG | - | chr3_2:85263431-85263450 | None:intergenic | 45.0% | |
| CGGAGGAATTGCAATTCCAA+TGG | + | chr3_2:85263435-85263454 | Msa0432940:CDS | 45.0% | |
| TTCCAATGGCGGTATACCAA+TGG | + | chr3_2:85263449-85263468 | Msa0432940:CDS | 45.0% | |
| ATCCATTGGTATACCGCCAT+TGG | - | chr3_2:85263454-85263473 | None:intergenic | 45.0% | |
| ! | TTCCAGTGATGGTAGTGTTG+TGG | + | chr3_2:85263708-85263727 | Msa0432940:CDS | 45.0% |
| TTCCAAGTGGTGTTCCTAGA+AGG | + | chr3_2:85263762-85263781 | Msa0432940:CDS | 45.0% | |
| AGTGGACAAAACAGCCTTCT+AGG | - | chr3_2:85263779-85263798 | None:intergenic | 45.0% | |
| TAAAGAGATGCAGGTTCCCA+GGG | - | chr3_2:85263803-85263822 | None:intergenic | 45.0% | |
| ATAAAGAGATGCAGGTTCCC+AGG | - | chr3_2:85263804-85263823 | None:intergenic | 45.0% | |
| GTCCAGTGATAAAGAGATGC+AGG | - | chr3_2:85263812-85263831 | None:intergenic | 45.0% | |
| CAAACTGCAGGATATGTGGA+AGG | + | chr3_2:85264070-85264089 | Msa0432940:intron | 45.0% | |
| ACTCTGATATGTGGTCTCCT+TGG | + | chr3_2:85264351-85264370 | Msa0432940:CDS | 45.0% | |
| TGTGGAAGGACTCCATTTGA+AGG | - | chr3_2:85264384-85264403 | None:intergenic | 45.0% | |
| TTTGTATGCATGGGAGACTG+TGG | - | chr3_2:85264402-85264421 | None:intergenic | 45.0% | |
| AGAGTTTGGCAGTTCTTAGG+AGG | + | chr3_2:85264421-85264440 | Msa0432940:CDS | 45.0% | |
| TCGGATCAGCTGCAAATCAA+TGG | - | chr3_2:85264534-85264553 | None:intergenic | 45.0% | |
| ATTTGCAGCTGATCCGAAAG+AGG | + | chr3_2:85264537-85264556 | Msa0432940:intron | 45.0% | |
| TTTGCAGCTGATCCGAAAGA+GGG | + | chr3_2:85264538-85264557 | Msa0432940:intron | 45.0% | |
| ! | CGCTTTTCACAACCCTCTTT+CGG | - | chr3_2:85264553-85264572 | None:intergenic | 45.0% |
| CTGTTGTTCCATGCATTCCT+TGG | - | chr3_2:85264576-85264595 | None:intergenic | 45.0% | |
| TCTTGAACAAGTCTCGTGTC+TGG | - | chr3_2:85264709-85264728 | None:intergenic | 45.0% | |
| TGATACCAAGGGTTGTGCAA+TGG | + | chr3_2:85264812-85264831 | Msa0432940:CDS | 45.0% | |
| ! | GGATACCTACCTCGGTTTTA+TGG | + | chr3_2:85264961-85264980 | Msa0432940:CDS | 45.0% |
| TATCCCCATAAAACCGAGGT+AGG | - | chr3_2:85264969-85264988 | None:intergenic | 45.0% | |
| TCTTCCTGGGAATCAGTTCT+GGG | + | chr3_2:85265013-85265032 | Msa0432940:CDS | 45.0% | |
| !! | ATTACTTGTAACGCCGGCTT+GGG | - | chr3_2:85265064-85265083 | None:intergenic | 45.0% |
| ! | AATTACTTGTAACGCCGGCT+TGG | - | chr3_2:85265065-85265084 | None:intergenic | 45.0% |
| TGGTACTGTCTCCACAAATG+AGG | - | chr3_2:85265193-85265212 | None:intergenic | 45.0% | |
| GTACCATTCAAGACCATAGC+TGG | + | chr3_2:85265207-85265226 | Msa0432940:CDS | 45.0% | |
| GACATACTACGTACTGCAGA+TGG | - | chr3_2:85265423-85265442 | None:intergenic | 45.0% | |
| CAGTACGTAGTATGTCACTC+AGG | + | chr3_2:85265427-85265446 | Msa0432940:CDS | 45.0% | |
| TGGATGAGATGACAACCAAC+AGG | + | chr3_2:85265679-85265698 | Msa0432940:CDS | 45.0% | |
| GGATGAGATGACAACCAACA+GGG | + | chr3_2:85265680-85265699 | Msa0432940:CDS | 45.0% | |
| GATGAGATGACAACCAACAG+GGG | + | chr3_2:85265681-85265700 | Msa0432940:CDS | 45.0% | |
| AAGTTTCAACTCTCCCCTGT+TGG | - | chr3_2:85265697-85265716 | None:intergenic | 45.0% | |
| AATATTCAGACAGCACCTCC+AGG | - | chr3_2:85265940-85265959 | None:intergenic | 45.0% | |
| ACTTCATGGCCAACTTAGGA+AGG | - | chr3_2:85266214-85266233 | None:intergenic | 45.0% | |
| GTGAACTTCATGGCCAACTT+AGG | - | chr3_2:85266218-85266237 | None:intergenic | 45.0% | |
| !! | GTTAGGTTGAGGGGAAAAGA+TGG | + | chr3_2:85266248-85266267 | Msa0432940:three_prime_UTR | 45.0% |
| AAAAAAAAGACGGGGGAGCA+AGG | + | chr3_2:85266294-85266313 | Msa0432940:three_prime_UTR | 45.0% | |
| CGTTTGTGAATACTCAGGTG+TGG | - | chr3_2:85266452-85266471 | None:intergenic | 45.0% | |
| !! | AAAAAATTAATAATCATAAA+AGG | - | chr3_2:85262351-85262370 | None:intergenic | 5.0% |
| TTTCCTCCTTCAGCTGTGAG+AGG | + | chr3_2:85262569-85262588 | Msa0432940:five_prime_UTR | 50.0% | |
| TTTCCTCTCACAGCTGAAGG+AGG | - | chr3_2:85262575-85262594 | None:intergenic | 50.0% | |
| ATTCTTTGCTTCCGCGCTTC+CGG | + | chr3_2:85262799-85262818 | Msa0432940:CDS | 50.0% | |
| AAGAGCTTGGTACCCAGTTG+AGG | - | chr3_2:85263013-85263032 | None:intergenic | 50.0% | |
| AGCCCAAGCTAGAAAGAGCT+TGG | - | chr3_2:85263026-85263045 | None:intergenic | 50.0% | |
| !! | AAGCTCTTTCTAGCTTGGGC+TGG | + | chr3_2:85263025-85263044 | Msa0432940:CDS | 50.0% |
| !! | TCTTTCTAGCTTGGGCTGGT+TGG | + | chr3_2:85263029-85263048 | Msa0432940:CDS | 50.0% |
| ! | TTTGAACCACAGGGACTGGT+AGG | + | chr3_2:85263377-85263396 | Msa0432940:intron | 50.0% |
| GGTTGAAAATCCTTCGTCGG+AGG | + | chr3_2:85263418-85263437 | Msa0432940:CDS | 50.0% | |
| TTCAATTCAGGGAGGCTACG+AGG | + | chr3_2:85263665-85263684 | Msa0432940:intron | 50.0% | |
| GTCCACAACACTACCATCAC+TGG | - | chr3_2:85263713-85263732 | None:intergenic | 50.0% | |
| ! | AGCCTTCTAGGAACACCACT+TGG | - | chr3_2:85263767-85263786 | None:intergenic | 50.0% |
| !! | GCTGTTTTGTCCACTTCCCT+GGG | + | chr3_2:85263784-85263803 | Msa0432940:CDS | 50.0% |
| TCATAGCGTGGCTTCTCAGA+TGG | + | chr3_2:85264160-85264179 | Msa0432940:CDS | 50.0% | |
| ! | GGTAGGCAGATGGCTTTTGA+AGG | - | chr3_2:85264205-85264224 | None:intergenic | 50.0% |
| CATTTGAAGGAGGAAGGCCA+AGG | - | chr3_2:85264371-85264390 | None:intergenic | 50.0% | |
| ! | CTTGGCCTTCCTCCTTCAAA+TGG | + | chr3_2:85264369-85264388 | Msa0432940:CDS | 50.0% |
| GGACTCCATTTGAAGGAGGA+AGG | - | chr3_2:85264377-85264396 | None:intergenic | 50.0% | |
| GGAAGGACTCCATTTGAAGG+AGG | - | chr3_2:85264381-85264400 | None:intergenic | 50.0% | |
| TATGCATGGGAGACTGTGGA+AGG | - | chr3_2:85264398-85264417 | None:intergenic | 50.0% | |
| TTTGGCAGTTCTTAGGAGGC+AGG | + | chr3_2:85264425-85264444 | Msa0432940:CDS | 50.0% | |
| !! | GAAAAGCGCCAAGGAATGCA+TGG | + | chr3_2:85264565-85264584 | Msa0432940:CDS | 50.0% |
| AGGTTCCATTGCACAACCCT+TGG | - | chr3_2:85264820-85264839 | None:intergenic | 50.0% | |
| CAATCAGGAGGGACTGCAAT+AGG | - | chr3_2:85264908-85264927 | None:intergenic | 50.0% | |
| CTATTGCAGTCCCTCCTGAT+TGG | + | chr3_2:85264906-85264925 | Msa0432940:CDS | 50.0% | |
| GTCTTCCTGGGAATCAGTTC+TGG | + | chr3_2:85265012-85265031 | Msa0432940:CDS | 50.0% | |
| ! | CTTTCCCAGAACTGATTCCC+AGG | - | chr3_2:85265020-85265039 | None:intergenic | 50.0% |
| !! | CTGGGAATCAGTTCTGGGAA+AGG | + | chr3_2:85265018-85265037 | Msa0432940:CDS | 50.0% |
| !! | TTACTTGTAACGCCGGCTTG+GGG | - | chr3_2:85265063-85265082 | None:intergenic | 50.0% |
| TGTTCTGTTTCGGGGTCACA+TGG | + | chr3_2:85265259-85265278 | Msa0432940:CDS | 50.0% | |
| GTCACATGGATACCGATAGG+TGG | + | chr3_2:85265273-85265292 | Msa0432940:CDS | 50.0% | |
| GTACTAGGGCAGATTTGACC+TGG | + | chr3_2:85265919-85265938 | Msa0432940:intron | 50.0% | |
| GGTACGAGAGTGAAAGGACA+AGG | + | chr3_2:85266269-85266288 | Msa0432940:three_prime_UTR | 50.0% | |
| TGGGTCTGCGCAATCTGTTC+CGG | + | chr3_2:85262666-85262685 | Msa0432940:CDS | 55.0% | |
| GAAAGCAATGACCGGAAGCG+CGG | - | chr3_2:85262813-85262832 | None:intergenic | 55.0% | |
| GCGCTTCCGGTCATTGCTTT+CGG | + | chr3_2:85262812-85262831 | Msa0432940:CDS | 55.0% | |
| ATGCCTGACGACGTTCCAAG+TGG | + | chr3_2:85263749-85263768 | Msa0432940:CDS | 55.0% | |
| ACACCACTTGGAACGTCGTC+AGG | - | chr3_2:85263755-85263774 | None:intergenic | 55.0% | |
| !! | GGCTGTTTTGTCCACTTCCC+TGG | + | chr3_2:85263783-85263802 | Msa0432940:CDS | 55.0% |
| !! | GAGGGTTGTGAAAAGCGCCA+AGG | + | chr3_2:85264556-85264575 | Msa0432940:CDS | 55.0% |
| CAGGAGGGACTGCAATAGGT+TGG | - | chr3_2:85264904-85264923 | None:intergenic | 55.0% | |
| GGGGTCACATGGATACCGAT+AGG | + | chr3_2:85265270-85265289 | Msa0432940:CDS | 55.0% | |
| CTAGGGCAGATTTGACCTGG+AGG | + | chr3_2:85265922-85265941 | Msa0432940:intron | 55.0% | |
| GTGAGAGCAGTCCTCTTCAG+AGG | - | chr3_2:85266008-85266027 | None:intergenic | 55.0% | |
| GCGCAATCTGTTCCGGCGTT+AGG | + | chr3_2:85262673-85262692 | Msa0432940:CDS | 60.0% | |
| AACTCGCCTACCAGTCCCTG+TGG | - | chr3_2:85263386-85263405 | None:intergenic | 60.0% | |
| AGGCGAGTTCAGCACTCCCA+AGG | + | chr3_2:85263397-85263416 | Msa0432940:CDS | 60.0% | |
| GATGCAGGTTCCCAGGGAAG+TGG | - | chr3_2:85263797-85263816 | None:intergenic | 60.0% | |
| TCCTCTTCGTCACCCCAAGC+CGG | + | chr3_2:85265048-85265067 | Msa0432940:CDS | 60.0% | |
| !! | GCCGGCTTGGGGTGACGAAG+AGG | - | chr3_2:85265052-85265071 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 85262122 | 85266507 | 85262122 | ID=Msa0432940;Name=Msa0432940 |
| chr3_2 | mRNA | 85262122 | 85266507 | 85262122 | ID=Msa0432940-mRNA-1;Parent=Msa0432940;Name=Msa0432940-mRNA-1;_AED=0.11;_eAED=0.11;_QI=478|0.90|0.91|1|1|1|12|459|682 |
| chr3_2 | exon | 85262122 | 85262694 | 85262122 | ID=Msa0432940-mRNA-1:exon:24291;Parent=Msa0432940-mRNA-1 |
| chr3_2 | exon | 85262775 | 85263050 | 85262775 | ID=Msa0432940-mRNA-1:exon:24292;Parent=Msa0432940-mRNA-1 |
| chr3_2 | exon | 85263155 | 85263293 | 85263155 | ID=Msa0432940-mRNA-1:exon:24293;Parent=Msa0432940-mRNA-1 |
| chr3_2 | exon | 85263389 | 85263554 | 85263389 | ID=Msa0432940-mRNA-1:exon:24294;Parent=Msa0432940-mRNA-1 |
| chr3_2 | exon | 85263675 | 85263841 | 85263675 | ID=Msa0432940-mRNA-1:exon:24295;Parent=Msa0432940-mRNA-1 |
| chr3_2 | exon | 85264080 | 85264253 | 85264080 | ID=Msa0432940-mRNA-1:exon:24296;Parent=Msa0432940-mRNA-1 |
| chr3_2 | exon | 85264351 | 85264446 | 85264351 | ID=Msa0432940-mRNA-1:exon:24297;Parent=Msa0432940-mRNA-1 |
| chr3_2 | exon | 85264545 | 85264661 | 85264545 | ID=Msa0432940-mRNA-1:exon:24298;Parent=Msa0432940-mRNA-1 |
| chr3_2 | exon | 85264771 | 85265078 | 85264771 | ID=Msa0432940-mRNA-1:exon:24299;Parent=Msa0432940-mRNA-1 |
| chr3_2 | exon | 85265170 | 85265449 | 85265170 | ID=Msa0432940-mRNA-1:exon:24300;Parent=Msa0432940-mRNA-1 |
| chr3_2 | exon | 85265615 | 85265722 | 85265615 | ID=Msa0432940-mRNA-1:exon:24301;Parent=Msa0432940-mRNA-1 |
| chr3_2 | exon | 85265926 | 85266507 | 85265926 | ID=Msa0432940-mRNA-1:exon:24302;Parent=Msa0432940-mRNA-1 |
| chr3_2 | five_prime_UTR | 85262122 | 85262599 | 85262122 | ID=Msa0432940-mRNA-1:five_prime_utr;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85262600 | 85262694 | 85262600 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85262775 | 85263050 | 85262775 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85263155 | 85263293 | 85263155 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85263389 | 85263554 | 85263389 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85263675 | 85263841 | 85263675 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85264080 | 85264253 | 85264080 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85264351 | 85264446 | 85264351 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85264545 | 85264661 | 85264545 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85264771 | 85265078 | 85264771 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85265170 | 85265449 | 85265170 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85265615 | 85265722 | 85265615 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | CDS | 85265926 | 85266048 | 85265926 | ID=Msa0432940-mRNA-1:cds;Parent=Msa0432940-mRNA-1 |
| chr3_2 | three_prime_UTR | 85266049 | 85266507 | 85266049 | ID=Msa0432940-mRNA-1:three_prime_utr;Parent=Msa0432940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
