AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0950470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0950470 MtrunA17_Chr6g0466691 90.530 264 15 1 1 264 1 254 8.57e-173 476
Msa0950470 MtrunA17_Chr2g0316751 52.217 203 89 3 69 264 70 271 7.01e-64 201
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0950470 AT3G15110.1 49.749 199 87 3 69 262 76 266 4.25e-59 189

Find 53 sgRNAs with CRISPR-Local

Find 615 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTTTGTTGCTTTATTC+TGG 0.170230 6_3:-38809670 Msa0950470:CDS
TCAAAATTTCTCTTATAAAT+AGG 0.184397 6_3:+38809335 None:intergenic
TGGTGGGTTGTTAAGGAAAT+TGG 0.207313 6_3:+38817326 None:intergenic
GAATAGCACAAAAGGACTTA+TGG 0.287634 6_3:-38810901 Msa0950470:CDS
CACTACAGAACGGTAATAAA+TGG 0.290677 6_3:-38809733 Msa0950470:intron
ACCTTATGGTGATTGTTATC+TGG 0.328009 6_3:+38809842 None:intergenic
AAACATTATGCTCATGTATA+AGG 0.330276 6_3:+38809435 None:intergenic
TACTTCATGAGAAGGATTAA+TGG 0.341332 6_3:+38817247 None:intergenic
GGAGGTTTGTGAAGAGAAAT+TGG 0.346245 6_3:+38817348 None:intergenic
AGAAATTGTCTGAAATTGTT+TGG 0.350157 6_3:+38810751 None:intergenic
GTGTATGGAATAAACTCTTT+TGG 0.353719 6_3:-38809688 Msa0950470:CDS
ACTTGATGATCCTTTCTCAT+AGG 0.358962 6_3:+38809630 None:intergenic
TTTGATCCTGCGCTGGATAG+TGG 0.365094 6_3:+38817088 None:intergenic
AACAATTTCAGACAATTTCT+CGG 0.370456 6_3:-38810748 Msa0950470:intron
GCTCCTAACAATGCTTTATC+TGG 0.378868 6_3:+38810843 None:intergenic
TCACCAGATAAAGCATTGTT+AGG 0.382378 6_3:-38810846 Msa0950470:CDS
ATTGTGTTAATATTAAATTA+TGG 0.391333 6_3:+38809370 None:intergenic
AATAGCACAAAAGGACTTAT+GGG 0.391794 6_3:-38810900 Msa0950470:CDS
AGAAAAGTGGTGGGTTGTTA+AGG 0.402804 6_3:+38817319 None:intergenic
TAAATTAACCACTGCAAAAG+TGG 0.411912 6_3:-38817207 Msa0950470:CDS
AGCATTGTTAGGAGCAGTTA+TGG 0.422251 6_3:-38810835 Msa0950470:CDS
TTCCATACACAAATGTAGAT+AGG 0.437409 6_3:+38809701 None:intergenic
GGTGGGTTGTTAAGGAAATT+GGG 0.459882 6_3:+38817327 None:intergenic
GAAAACTGAAAGCAAAATCA+TGG 0.462629 6_3:-38809602 Msa0950470:CDS
GAACAACACTGATAGTTACT+TGG 0.464641 6_3:+38817141 None:intergenic
CATGTAGCAGTAGCAACTAT+TGG 0.465797 6_3:+38809486 None:intergenic
TTATGTTGAAATTTATGAAG+TGG 0.484183 6_3:+38817287 None:intergenic
TCATCATTGAATAGCACAAA+AGG 0.490794 6_3:-38810909 Msa0950470:CDS
GATCAAAAGAGCAAAACAAT+TGG 0.495344 6_3:-38817072 Msa0950470:intron
GTAAGTGAGAGTGCAACATT+TGG 0.501960 6_3:+38817381 None:intergenic
TACCTATCTACATTTGTGTA+TGG 0.525187 6_3:-38809703 Msa0950470:CDS
TTGTTAGGAGCAGTTATGGC+TGG 0.532963 6_3:-38810831 Msa0950470:CDS
ATTTCTCTTATAAATAGGAC+CGG 0.533377 6_3:+38809340 None:intergenic
GCACTCAACACCTATGAGAA+AGG 0.545098 6_3:-38809640 Msa0950470:CDS
TTGATCCTGCGCTGGATAGT+GGG 0.548692 6_3:+38817089 None:intergenic
GCCAGATAACAATCACCATA+AGG 0.551485 6_3:-38809843 Msa0950470:intron
AACAATGCTTTATCTGGTGA+AGG 0.551642 6_3:+38810849 None:intergenic
CTCTTATAAATAGGACCGGA+GGG 0.554392 6_3:+38809344 None:intergenic
TATTAACACAATACTCCCTC+CGG 0.561900 6_3:-38809359 Msa0950470:three_prime_UTR
AATGCTTTATCTGGTGAAGG+TGG 0.571857 6_3:+38810852 None:intergenic
CATAGGTGTTGAGTGCAAGT+TGG 0.575800 6_3:+38809647 None:intergenic
TATTTCCCACTATCCAGCGC+AGG 0.577116 6_3:-38817094 Msa0950470:CDS
GTGGTTAATTTATTTAGCCA+CGG 0.585169 6_3:+38817218 None:intergenic
GGGAAATAAGAAAACAGCAA+TGG 0.587708 6_3:+38817109 None:intergenic
TAAAAGATAAAGCTAAGTGA+AGG 0.594374 6_3:+38817414 None:intergenic
TGAAATTTATGAAGTGGAGA+TGG 0.606676 6_3:+38817293 None:intergenic
TCTCTTATAAATAGGACCGG+AGG 0.614852 6_3:+38809343 None:intergenic
GTGGAGATGGTGAAGAAAAG+TGG 0.619307 6_3:+38817306 None:intergenic
TATGAGAAAGGATCATCAAG+TGG 0.631593 6_3:-38809628 Msa0950470:CDS
AGATGGTGAAGAAAAGTGGT+GGG 0.654585 6_3:+38817310 None:intergenic
TAGTTGCTACTGCTACATGT+TGG 0.654974 6_3:-38809482 Msa0950470:three_prime_UTR
GAGATGGTGAAGAAAAGTGG+TGG 0.667341 6_3:+38817309 None:intergenic
GGGTTGTTAAGGAAATTGGG+AGG 0.688045 6_3:+38817330 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTCATTCAATTTA+TGG - chr6_3:38809747-38809766 Msa0950470:intron 10.0%
!!! TTAAATTTTCTCTATTTTAT+TGG - chr6_3:38809856-38809875 Msa0950470:intron 10.0%
!! AAGTAATTCTATAATTTATT+TGG + chr6_3:38812608-38812627 None:intergenic 10.0%
!! ATATACACATATATATAATT+TGG + chr6_3:38814055-38814074 None:intergenic 10.0%
!! GTAATTTAAATAATATTGAA+TGG - chr6_3:38815398-38815417 Msa0950470:intron 10.0%
!! AAAAATCAATATATAATAAG+TGG + chr6_3:38815738-38815757 None:intergenic 10.0%
!!! TATTTTAAAAGTAATAACAA+CGG + chr6_3:38816737-38816756 None:intergenic 10.0%
!! ATTGTGTTAATATTAAATTA+TGG + chr6_3:38817399-38817418 None:intergenic 10.0%
!!! TTATTGGAATATTTTATTTG+AGG - chr6_3:38809872-38809891 Msa0950470:intron 15.0%
!!! ATAAGATTTAATTGTAGTTT+TGG - chr6_3:38809977-38809996 Msa0950470:intron 15.0%
!!! ATTTTAAAATTTGTCAGTTT+TGG - chr6_3:38810038-38810057 Msa0950470:intron 15.0%
!!! AAACTGTCAATTTTAAAAAT+AGG - chr6_3:38810408-38810427 Msa0950470:intron 15.0%
!!! TTTTATTTGGTAAATTTATG+CGG - chr6_3:38810448-38810467 Msa0950470:intron 15.0%
!!! ATCAATTATTTTGATACAAA+GGG - chr6_3:38810650-38810669 Msa0950470:intron 15.0%
!!! AATTTAAAATATACTAACTC+TGG - chr6_3:38810786-38810805 Msa0950470:CDS 15.0%
!! ATTCTAGATAAATTTAGTAT+GGG + chr6_3:38812524-38812543 None:intergenic 15.0%
!! TATTCTAGATAAATTTAGTA+TGG + chr6_3:38812525-38812544 None:intergenic 15.0%
!!! GAATCTGAAATAAAATAAAA+GGG - chr6_3:38812749-38812768 Msa0950470:intron 15.0%
!!! ATTAAAACATGTTTAAAATG+TGG + chr6_3:38813240-38813259 None:intergenic 15.0%
!! AATTAATTTCAGAATAAAGA+CGG + chr6_3:38813404-38813423 None:intergenic 15.0%
!! AAAATAAGGAACTTTAAATA+TGG + chr6_3:38813541-38813560 None:intergenic 15.0%
!! AATGTACAATAAATATGTAA+TGG - chr6_3:38813629-38813648 Msa0950470:intron 15.0%
!!! TAAAAAAATGTAACCAATTT+TGG - chr6_3:38813856-38813875 Msa0950470:intron 15.0%
!! TAAACATATTCCTAATATAA+AGG - chr6_3:38813982-38814001 Msa0950470:intron 15.0%
!!! TCTAAATTTTCCTTTATATT+AGG + chr6_3:38813995-38814014 None:intergenic 15.0%
!! AAATATTAGAACAAAACAAT+GGG - chr6_3:38814140-38814159 Msa0950470:intron 15.0%
!!! AAAATATGATGAATTCTTTT+TGG + chr6_3:38815531-38815550 None:intergenic 15.0%
!!! CATAATTCTAAAAAATAAAG+TGG + chr6_3:38815712-38815731 None:intergenic 15.0%
!!! CACTTTATTTTTTAGAATTA+TGG - chr6_3:38815710-38815729 Msa0950470:intron 15.0%
!! ATAAGATCACATATATTATA+GGG + chr6_3:38815762-38815781 None:intergenic 15.0%
!! TATAAGATCACATATATTAT+AGG + chr6_3:38815763-38815782 None:intergenic 15.0%
!! TTTCATCAAAGAATATTATA+TGG + chr6_3:38815793-38815812 None:intergenic 15.0%
!! TATTCTTTGATGAAATAAAT+TGG - chr6_3:38815798-38815817 Msa0950470:intron 15.0%
!! TAACTATTCATTCATAAAAA+AGG + chr6_3:38816070-38816089 None:intergenic 15.0%
!! ATAATATTCTTTCATCTTAA+TGG - chr6_3:38816836-38816855 Msa0950470:intron 15.0%
!! CATAAAAAATGAAAACATTA+AGG + chr6_3:38816978-38816997 None:intergenic 15.0%
!! TTATGTTGAAATTTATGAAG+TGG + chr6_3:38809482-38809501 None:intergenic 20.0%
!!! CACATATTTTTACCATTTTA+CGG - chr6_3:38810002-38810021 Msa0950470:intron 20.0%
!! TCCAAAATCATCATTAAAAA+AGG - chr6_3:38810088-38810107 Msa0950470:intron 20.0%
!! CCAAAATCATCATTAAAAAA+GGG - chr6_3:38810089-38810108 Msa0950470:intron 20.0%
!! CAAAATCATCATTAAAAAAG+GGG - chr6_3:38810090-38810109 Msa0950470:intron 20.0%
!! TAAATGACGTGATATATTAT+AGG + chr6_3:38810339-38810358 None:intergenic 20.0%
!! CATGTAAGTTTAAAAATGTT+GGG + chr6_3:38810476-38810495 None:intergenic 20.0%
!! GTGGAAATAATATTAATTAC+AGG - chr6_3:38810567-38810586 Msa0950470:intron 20.0%
!!! GATCAATTATTTTGATACAA+AGG - chr6_3:38810649-38810668 Msa0950470:intron 20.0%
!! CAATTTAATAGAACATGAAT+AGG + chr6_3:38811311-38811330 None:intergenic 20.0%
!! ATTAAATTGATCCAAAAAAG+TGG - chr6_3:38811322-38811341 Msa0950470:intron 20.0%
!!! CTTTTCATTTAATGAAAGAT+TGG + chr6_3:38811511-38811530 None:intergenic 20.0%
!! CAAATTAAATTATTGACCTT+CGG - chr6_3:38811829-38811848 Msa0950470:intron 20.0%
!!! TGATAAGTTTATTTTGAAAG+CGG + chr6_3:38811975-38811994 None:intergenic 20.0%
!!! ATTCATCATATTTTTCCTAT+TGG + chr6_3:38812046-38812065 None:intergenic 20.0%
!!! CGAATCTGAAATAAAATAAA+AGG - chr6_3:38812748-38812767 Msa0950470:intron 20.0%
!! TGAAATAAAATAAAAGGGAT+TGG - chr6_3:38812754-38812773 Msa0950470:intron 20.0%
!! GAAATAAAATAAAAGGGATT+GGG - chr6_3:38812755-38812774 Msa0950470:intron 20.0%
!! AAATAAAATAAAAGGGATTG+GGG - chr6_3:38812756-38812775 Msa0950470:intron 20.0%
!!! TATTATCTGAGTTGATTTTA+CGG - chr6_3:38813032-38813051 Msa0950470:intron 20.0%
!!! TGAATATCTTATAACCTTTT+AGG + chr6_3:38813476-38813495 None:intergenic 20.0%
!! GAACTTTAAATATGGAATTT+CGG + chr6_3:38813533-38813552 None:intergenic 20.0%
!! GAAATATTAGAACAAAACAA+TGG - chr6_3:38814139-38814158 Msa0950470:intron 20.0%
!! TATGAATTACTAGAATATGT+TGG + chr6_3:38814189-38814208 None:intergenic 20.0%
!! ATCACATATTAACATTCTAA+TGG - chr6_3:38814209-38814228 Msa0950470:intron 20.0%
!! GATATAAGTTTCATGTATTT+CGG + chr6_3:38814584-38814603 None:intergenic 20.0%
!! AAACTTATATCCAAATTGAA+GGG - chr6_3:38814593-38814612 Msa0950470:intron 20.0%
!! GGGATTTAAGAAATTATTAT+GGG + chr6_3:38814811-38814830 None:intergenic 20.0%
!! TGGGATTTAAGAAATTATTA+TGG + chr6_3:38814812-38814831 None:intergenic 20.0%
!!! CACTATTAAGTTTGAATTTT+TGG + chr6_3:38814858-38814877 None:intergenic 20.0%
!! TTAGAAGTTAAATGAAGAAT+TGG - chr6_3:38815123-38815142 Msa0950470:intron 20.0%
!! TAGAAAAATGTAGAAAAACA+TGG - chr6_3:38815370-38815389 Msa0950470:intron 20.0%
!!! AGAATTCATCATATTTTCAA+TGG - chr6_3:38815534-38815553 Msa0950470:intron 20.0%
!! ACTCATAACATACTAATAAT+TGG - chr6_3:38815588-38815607 Msa0950470:intron 20.0%
!!! ATTGGTGATTTTAGAAATAT+AGG - chr6_3:38815816-38815835 Msa0950470:intron 20.0%
!!! AATGTGTTTATTTTATCTCT+AGG - chr6_3:38816183-38816202 Msa0950470:intron 20.0%
!!! ATGTGTTTATTTTATCTCTA+GGG - chr6_3:38816184-38816203 Msa0950470:intron 20.0%
!!! ACTTATTTGAGATAAGTTTA+GGG + chr6_3:38816955-38816974 None:intergenic 20.0%
! TAAAAGATAAAGCTAAGTGA+AGG + chr6_3:38809355-38809374 None:intergenic 25.0%
! TCATCTATAGCATCAAAAAT+GGG + chr6_3:38809593-38809612 None:intergenic 25.0%
! TAAACATGTGTGTAGATATA+TGG - chr6_3:38809812-38809831 Msa0950470:intron 25.0%
!! AAATCCTTTTGCAAAGAAAT+TGG - chr6_3:38809943-38809962 Msa0950470:intron 25.0%
! TAAACCAATTTCTTTGCAAA+AGG + chr6_3:38809950-38809969 None:intergenic 25.0%
! CGTAAAATGGTAAAAATATG+TGG + chr6_3:38810004-38810023 None:intergenic 25.0%
!!! CCCTTTTTTAATGATGATTT+TGG + chr6_3:38810092-38810111 None:intergenic 25.0%
! ATCATTAAAAAAGGGGAAAA+GGG - chr6_3:38810097-38810116 Msa0950470:intron 25.0%
! GCATGTAAGTTTAAAAATGT+TGG + chr6_3:38810477-38810496 None:intergenic 25.0%
! GGTAGATATTTAATTGAAAG+TGG - chr6_3:38810545-38810564 Msa0950470:intron 25.0%
! AGATATTTAATTGAAAGTGG+TGG - chr6_3:38810548-38810567 Msa0950470:intron 25.0%
! TTCATAATAATTCATGCATG+AGG + chr6_3:38810703-38810722 None:intergenic 25.0%
! GAATACAAACAACTAAGTTT+CGG - chr6_3:38810720-38810739 Msa0950470:intron 25.0%
! AAATAAGAAAAAGTTGAGTC+AGG - chr6_3:38810817-38810836 Msa0950470:CDS 25.0%
! AGTTACATTAGTATAGATAG+TGG - chr6_3:38810951-38810970 Msa0950470:intron 25.0%
! GTTACATTAGTATAGATAGT+GGG - chr6_3:38810952-38810971 Msa0950470:intron 25.0%
!!! CATTTTGATATCACGAAATT+TGG + chr6_3:38811104-38811123 None:intergenic 25.0%
! CAAATTTCGTGATATCAAAA+TGG - chr6_3:38811102-38811121 Msa0950470:intron 25.0%
! TTTAATGAAAGATTGGAGTT+TGG + chr6_3:38811504-38811523 None:intergenic 25.0%
! CGAAGGTCAATAATTTAATT+TGG + chr6_3:38811831-38811850 None:intergenic 25.0%
!!! TTATTTTATTTCAGATTCGC+AGG + chr6_3:38812747-38812766 None:intergenic 25.0%
!! ACGTCTTTATTATCAGTTTT+AGG + chr6_3:38813374-38813393 None:intergenic 25.0%
! TTTCCAAAGTTTGGAAAATA+AGG + chr6_3:38813555-38813574 None:intergenic 25.0%
!! ATTCATTTTATTCGACTATG+TGG + chr6_3:38813774-38813793 None:intergenic 25.0%
!! AATAGAATTGTCACATGTTT+TGG + chr6_3:38814030-38814049 None:intergenic 25.0%
! GAAACTTATATCCAAATTGA+AGG - chr6_3:38814592-38814611 Msa0950470:intron 25.0%
! CCTGGAATTAAGTAATTATT+GGG + chr6_3:38814641-38814660 None:intergenic 25.0%
! ACCTGGAATTAAGTAATTAT+TGG + chr6_3:38814642-38814661 None:intergenic 25.0%
!!! TTTTTGAGACGTAATTTGAA+TGG + chr6_3:38814703-38814722 None:intergenic 25.0%
! AAGAAATTATTATGGGAAAG+TGG + chr6_3:38814804-38814823 None:intergenic 25.0%
!!! AAGTTTGAATTTTTGGAGAA+TGG + chr6_3:38814851-38814870 None:intergenic 25.0%
! ATTGTTCAATTCTATGCTTT+AGG + chr6_3:38814960-38814979 None:intergenic 25.0%
!!! TTCCTCTTTTTTTCATATGA+GGG + chr6_3:38815023-38815042 None:intergenic 25.0%
!! CATTTAACTTCTAAATCTCA+AGG + chr6_3:38815117-38815136 None:intergenic 25.0%
! CAAATTCATTCAATCTTTCA+TGG + chr6_3:38815263-38815282 None:intergenic 25.0%
! CATGAAAGATTGAATGAATT+TGG - chr6_3:38815261-38815280 Msa0950470:intron 25.0%
!!! AAATGTTGATTTTTAGAGAG+AGG - chr6_3:38815340-38815359 Msa0950470:intron 25.0%
!!! TATGATGAATTCTTTTTGGT+GGG + chr6_3:38815527-38815546 None:intergenic 25.0%
!! ATATGATGAATTCTTTTTGG+TGG + chr6_3:38815528-38815547 None:intergenic 25.0%
!!! TTTTAGAAATATAGGTCTTC+TGG - chr6_3:38815824-38815843 Msa0950470:intron 25.0%
!! AGAAATTGTCTGAAATTGTT+TGG + chr6_3:38816018-38816037 None:intergenic 25.0%
! AACAATTTCAGACAATTTCT+CGG - chr6_3:38816018-38816037 Msa0950470:intron 25.0%
!!! ACATTAAAAGTGTCAACAAA+GGG + chr6_3:38816150-38816169 None:intergenic 25.0%
!!! CACTTTTAATGTCATTTCAT+TGG - chr6_3:38816158-38816177 Msa0950470:intron 25.0%
! TAGTATGAGAATGTATTGAA+TGG - chr6_3:38816378-38816397 Msa0950470:intron 25.0%
! CTATCCTTAGTTGTATAAAT+AGG + chr6_3:38816440-38816459 None:intergenic 25.0%
! CATTGTAGTGCATTTATATT+CGG - chr6_3:38816524-38816543 Msa0950470:intron 25.0%
!! GAAAATTATGTGTTCTAGAT+TGG + chr6_3:38816630-38816649 None:intergenic 25.0%
!! GACTTATTTGAGATAAGTTT+AGG + chr6_3:38816956-38816975 None:intergenic 25.0%
! ATATTTATCTCACTACAGAA+CGG - chr6_3:38817023-38817042 Msa0950470:intron 25.0%
! AAACATTATGCTCATGTATA+AGG + chr6_3:38817334-38817353 None:intergenic 25.0%
! ATTTCTCTTATAAATAGGAC+CGG + chr6_3:38817429-38817448 None:intergenic 25.0%
TGAAATTTATGAAGTGGAGA+TGG + chr6_3:38809476-38809495 None:intergenic 30.0%
TACTTCATGAGAAGGATTAA+TGG + chr6_3:38809522-38809541 None:intergenic 30.0%
GGTAAAAATACTTCATGAGA+AGG + chr6_3:38809530-38809549 None:intergenic 30.0%
GTGGTTAATTTATTTAGCCA+CGG + chr6_3:38809551-38809570 None:intergenic 30.0%
TAAATTAACCACTGCAAAAG+TGG - chr6_3:38809559-38809578 Msa0950470:CDS 30.0%
CATCTATAGCATCAAAAATG+GGG + chr6_3:38809592-38809611 None:intergenic 30.0%
GTCATCTATAGCATCAAAAA+TGG + chr6_3:38809594-38809613 None:intergenic 30.0%
GATCAAAAGAGCAAAACAAT+TGG - chr6_3:38809694-38809713 Msa0950470:CDS 30.0%
CATCATTAAAAAAGGGGAAA+AGG - chr6_3:38810096-38810115 Msa0950470:intron 30.0%
TCATTAAAAAAGGGGAAAAG+GGG - chr6_3:38810098-38810117 Msa0950470:intron 30.0%
ATCGCTCAAAAAAAAAGAAG+AGG - chr6_3:38810139-38810158 Msa0950470:intron 30.0%
TCGCTCAAAAAAAAAGAAGA+GGG - chr6_3:38810140-38810159 Msa0950470:intron 30.0%
TGCACAATTAGCAAAAAGAT+AGG - chr6_3:38810173-38810192 Msa0950470:intron 30.0%
GCACAATTAGCAAAAAGATA+GGG - chr6_3:38810174-38810193 Msa0950470:intron 30.0%
CACAATTAGCAAAAAGATAG+GGG - chr6_3:38810175-38810194 Msa0950470:intron 30.0%
ACAATTAGCAAAAAGATAGG+GGG - chr6_3:38810176-38810195 Msa0950470:intron 30.0%
CAAAATCGCTCAAAAAAAAG+AGG - chr6_3:38810262-38810281 Msa0950470:intron 30.0%
! TACATGCTCTTGTTATCTAT+TGG - chr6_3:38810490-38810509 Msa0950470:intron 30.0%
!! ATATCTACCGACTTGTATTA+TGG + chr6_3:38810534-38810553 None:intergenic 30.0%
GAAAAGTAAGTTAACGTGTT+TGG - chr6_3:38810839-38810858 Msa0950470:CDS 30.0%
AACGTGTTTGGTCTAATAAT+TGG - chr6_3:38810851-38810870 Msa0950470:CDS 30.0%
AGTAAACTCAATCTTTGAGT+TGG - chr6_3:38811034-38811053 Msa0950470:intron 30.0%
! TAAACTTAGTGTTGAAGATC+TGG - chr6_3:38811057-38811076 Msa0950470:intron 30.0%
ATTTCGTGATATCAAAATGG+CGG - chr6_3:38811105-38811124 Msa0950470:intron 30.0%
! AAAAGCACGATCAATAACTT+CGG - chr6_3:38811526-38811545 Msa0950470:intron 30.0%
!!! CTTGACAAAGTTTTAGATTG+CGG - chr6_3:38811567-38811586 Msa0950470:intron 30.0%
! TTAATTTGGAGAATGTGTAG+AGG + chr6_3:38811817-38811836 None:intergenic 30.0%
ATTAAATTATTGACCTTCGG+AGG - chr6_3:38811832-38811851 Msa0950470:intron 30.0%
!! TTTTGAAAGCGGAAAGAAAT+GGG + chr6_3:38811964-38811983 None:intergenic 30.0%
!! ATTTTGAAAGCGGAAAGAAA+TGG + chr6_3:38811965-38811984 None:intergenic 30.0%
AGATTTGACTGCTTTCAATT+TGG + chr6_3:38812406-38812425 None:intergenic 30.0%
TTGTCTATGCACAAGAAATA+TGG + chr6_3:38812444-38812463 None:intergenic 30.0%
! AAATTTAGTATGGGTGTTAC+AGG + chr6_3:38812515-38812534 None:intergenic 30.0%
ATGTGCGTTAAACTTAGTAT+TGG - chr6_3:38812551-38812570 Msa0950470:intron 30.0%
ATGATAGAACAGTATAAACC+CGG + chr6_3:38812876-38812895 None:intergenic 30.0%
ATTCTGATACTAACCTATTC+AGG - chr6_3:38813421-38813440 Msa0950470:intron 30.0%
TGTCATATGTCATTCCTAAA+AGG - chr6_3:38813459-38813478 Msa0950470:intron 30.0%
!!! TAGTCGATGTTAGTTTTATC+AGG + chr6_3:38813504-38813523 None:intergenic 30.0%
!!! GTTCCTTATTTTCCAAACTT+TGG - chr6_3:38813549-38813568 Msa0950470:intron 30.0%
TAGCCATGAAAGTAATTCAT+GGG + chr6_3:38813582-38813601 None:intergenic 30.0%
TTAGCCATGAAAGTAATTCA+TGG + chr6_3:38813583-38813602 None:intergenic 30.0%
ATTATGCAATTCTCCAACTT+AGG + chr6_3:38813657-38813676 None:intergenic 30.0%
TTTATATTCTAGCCAAGCAA+TGG - chr6_3:38813796-38813815 Msa0950470:intron 30.0%
ACATAAATATAGCCATTGCT+TGG + chr6_3:38813811-38813830 None:intergenic 30.0%
TTAGAATTTAACACTTGCCT+TGG + chr6_3:38813885-38813904 None:intergenic 30.0%
TTTATGTTAGTGTAGACGTT+GGG + chr6_3:38813966-38813985 None:intergenic 30.0%
!! AAGTTGTGGTTAAGTTGTTT+TGG + chr6_3:38814356-38814375 None:intergenic 30.0%
AACAACTTAACCACAACTTA+TGG - chr6_3:38814357-38814376 Msa0950470:intron 30.0%
! GTTGAAGTTTGGAATGAATT+CGG + chr6_3:38814395-38814414 None:intergenic 30.0%
AATCTGCAGAAAAAGCTATA+CGG + chr6_3:38814511-38814530 None:intergenic 30.0%
TCAGAAAATGCATTAGAAGT+TGG + chr6_3:38814548-38814567 None:intergenic 30.0%
ATGCTAAATTCCCTTCAATT+TGG + chr6_3:38814606-38814625 None:intergenic 30.0%
CCCAATAATTACTTAATTCC+AGG - chr6_3:38814638-38814657 Msa0950470:intron 30.0%
! TATATGTGATGTTTTCGTCA+CGG + chr6_3:38814678-38814697 None:intergenic 30.0%
GTGGTTATAAGTGACTAAAT+TGG + chr6_3:38814735-38814754 None:intergenic 30.0%
TGGATGGAAATTATAGACTT+GGG + chr6_3:38814831-38814850 None:intergenic 30.0%
ATGGATGGAAATTATAGACT+TGG + chr6_3:38814832-38814851 None:intergenic 30.0%
!! TTGAATTTTTGGAGAATGGA+TGG + chr6_3:38814847-38814866 None:intergenic 30.0%
!! AGTGATTTGTTTGATGCATA+AGG + chr6_3:38814909-38814928 None:intergenic 30.0%
TTAGGAATGCAATTATGTTG+TGG + chr6_3:38814942-38814961 None:intergenic 30.0%
ATTCAACAAAGTGACATTAG+AGG - chr6_3:38814978-38814997 Msa0950470:intron 30.0%
AACCCTCATATGAAAAAAAG+AGG - chr6_3:38815018-38815037 Msa0950470:intron 30.0%
!!! CTTCCTCTTTTTTTCATATG+AGG + chr6_3:38815024-38815043 None:intergenic 30.0%
!! CAATATCTAAGCTTGCTTTT+TGG + chr6_3:38815090-38815109 None:intergenic 30.0%
CAAAAAGCAAGCTTAGATAT+TGG - chr6_3:38815088-38815107 Msa0950470:intron 30.0%
TGAAGAATTGGAAAAATGAG+AGG - chr6_3:38815135-38815154 Msa0950470:intron 30.0%
!!! AAGGTGTGATTTTTGAAACT+TGG - chr6_3:38815185-38815204 Msa0950470:intron 30.0%
AATCATGCATATGAGTTCTT+AGG + chr6_3:38815228-38815247 None:intergenic 30.0%
GAAAGATTGAATGAATTTGG+AGG - chr6_3:38815264-38815283 Msa0950470:intron 30.0%
ATTGAATGAATTTGGAGGTT+GGG - chr6_3:38815269-38815288 Msa0950470:intron 30.0%
!!! TTTTTTAGCAAGGGGTAAAA+GGG + chr6_3:38815432-38815451 None:intergenic 30.0%
!!! TTTTTTTAGCAAGGGGTAAA+AGG + chr6_3:38815433-38815452 None:intergenic 30.0%
!!! CATGAGATTTTTTTAGCAAG+GGG + chr6_3:38815440-38815459 None:intergenic 30.0%
!!! CCATGAGATTTTTTTAGCAA+GGG + chr6_3:38815441-38815460 None:intergenic 30.0%
!!! TCCATGAGATTTTTTTAGCA+AGG + chr6_3:38815442-38815461 None:intergenic 30.0%
! TAAATGACAGTGTTGTTAAG+CGG - chr6_3:38815487-38815506 Msa0950470:intron 30.0%
!! ATGATGAATTCTTTTTGGTG+GGG + chr6_3:38815526-38815545 None:intergenic 30.0%
AATGGTAGAGATGATTGAAT+TGG - chr6_3:38815552-38815571 Msa0950470:intron 30.0%
ATGGTAGAGATGATTGAATT+GGG - chr6_3:38815553-38815572 Msa0950470:intron 30.0%
TTACTACAGTCTACAAAAGA+AGG + chr6_3:38815643-38815662 None:intergenic 30.0%
TCATCATTGAATAGCACAAA+AGG - chr6_3:38815857-38815876 Msa0950470:intron 30.0%
AATAGCACAAAAGGACTTAT+GGG - chr6_3:38815866-38815885 Msa0950470:intron 30.0%
CCTCATATGAACATAAACAA+TGG + chr6_3:38816112-38816131 None:intergenic 30.0%
CCATTGTTTATGTTCATATG+AGG - chr6_3:38816109-38816128 Msa0950470:intron 30.0%
!! GACATTAAAAGTGTCAACAA+AGG + chr6_3:38816151-38816170 None:intergenic 30.0%
! TATCTCTAGGGAGAAAAATT+AGG - chr6_3:38816196-38816215 Msa0950470:intron 30.0%
TTTCTTTGATATGTCTCCAT+AGG - chr6_3:38816224-38816243 Msa0950470:intron 30.0%
! ATGGATTAAAGGGAATCATA+GGG + chr6_3:38816263-38816282 None:intergenic 30.0%
! TATGGATTAAAGGGAATCAT+AGG + chr6_3:38816264-38816283 None:intergenic 30.0%
! CCATGTCATTATGGATTAAA+GGG + chr6_3:38816273-38816292 None:intergenic 30.0%
CCTTTAATCCATAATGACAT+GGG - chr6_3:38816271-38816290 Msa0950470:intron 30.0%
CTTTAATCCATAATGACATG+GGG - chr6_3:38816272-38816291 Msa0950470:intron 30.0%
TAGTTGTATAAATAGGTCCT+AGG + chr6_3:38816433-38816452 None:intergenic 30.0%
AGGACCTATTTATACAACTA+AGG - chr6_3:38816433-38816452 Msa0950470:intron 30.0%
TGTGATAAATCTTCTGTGTT+CGG - chr6_3:38816573-38816592 Msa0950470:intron 30.0%
! TGCATTTTCTTAAGTGCTTT+TGG + chr6_3:38816702-38816721 None:intergenic 30.0%
CACTTAAGAAAATGCACATA+AGG - chr6_3:38816706-38816725 Msa0950470:intron 30.0%
! ATTTGAGATAAGTTTAGGGA+AGG + chr6_3:38816951-38816970 None:intergenic 30.0%
TACCTATCTACATTTGTGTA+TGG - chr6_3:38817063-38817082 Msa0950470:intron 30.0%
TTCCATACACAAATGTAGAT+AGG + chr6_3:38817068-38817087 None:intergenic 30.0%
! GTGTATGGAATAAACTCTTT+TGG - chr6_3:38817078-38817097 Msa0950470:CDS 30.0%
!! TTTGGTTTGTTGCTTTATTC+TGG - chr6_3:38817096-38817115 Msa0950470:CDS 30.0%
GAAAACTGAAAGCAAAATCA+TGG - chr6_3:38817164-38817183 Msa0950470:CDS 30.0%
!!! CTACATGTTGGTTTTCTAAT+AGG - chr6_3:38817296-38817315 Msa0950470:CDS 30.0%
!! CTCATGAAGTATTTTTACCG+TGG - chr6_3:38809531-38809550 Msa0950470:CDS 35.0%
GAACAACACTGATAGTTACT+TGG + chr6_3:38809628-38809647 None:intergenic 35.0%
GGGAAATAAGAAAACAGCAA+TGG + chr6_3:38809660-38809679 None:intergenic 35.0%
AGACGATCAATTCCGTAAAA+TGG + chr6_3:38810017-38810036 None:intergenic 35.0%
! GATTTTGGACAAGACACAAT+TGG + chr6_3:38810077-38810096 None:intergenic 35.0%
CGCTCAAAAAAAAAGAAGAG+GGG - chr6_3:38810141-38810160 Msa0950470:intron 35.0%
GCTCAAAAAAAAAGAAGAGG+GGG - chr6_3:38810142-38810161 Msa0950470:intron 35.0%
AATCGCTCAAAAAAAAGAGG+AGG - chr6_3:38810265-38810284 Msa0950470:intron 35.0%
TCGCACAATTAGCAAAAGAT+AGG - chr6_3:38810295-38810314 Msa0950470:intron 35.0%
CGCACAATTAGCAAAAGATA+GGG - chr6_3:38810296-38810315 Msa0950470:intron 35.0%
GCACAATTAGCAAAAGATAG+GGG - chr6_3:38810297-38810316 Msa0950470:intron 35.0%
CACAATTAGCAAAAGATAGG+GGG - chr6_3:38810298-38810317 Msa0950470:intron 35.0%
! CCAAATAAAAGAGCATGTGT+TGG + chr6_3:38810438-38810457 None:intergenic 35.0%
! CCAACACATGCTCTTTTATT+TGG - chr6_3:38810435-38810454 Msa0950470:intron 35.0%
ACCTTTGCCATAATACAAGT+CGG - chr6_3:38810524-38810543 Msa0950470:intron 35.0%
ACAAACAACTAAGTTTCGGT+TGG - chr6_3:38810724-38810743 Msa0950470:intron 35.0%
CAAACAACTAAGTTTCGGTT+GGG - chr6_3:38810725-38810744 Msa0950470:intron 35.0%
CAGAGTTCAAAGCATGATTA+TGG - chr6_3:38810759-38810778 Msa0950470:CDS 35.0%
!! ATAGTGGGACTAGCTAATAA+TGG - chr6_3:38810967-38810986 Msa0950470:intron 35.0%
!! CTTTATGCTCTAGAATGGTT+GGG + chr6_3:38811197-38811216 None:intergenic 35.0%
TGTCCTATTCCAATTCTAGT+GGG + chr6_3:38811226-38811245 None:intergenic 35.0%
! GCATATGTATCTGATGATGA+AGG + chr6_3:38811289-38811308 None:intergenic 35.0%
ATTGATCCAAAAAAGTGGCA+TGG - chr6_3:38811327-38811346 Msa0950470:intron 35.0%
!!! AAATGTCCATGCCACTTTTT+TGG + chr6_3:38811336-38811355 None:intergenic 35.0%
AACTTTGTTGGCAAAATCCT+CGG + chr6_3:38811376-38811395 None:intergenic 35.0%
AATAACTTCGGCTACTGTTT+CGG - chr6_3:38811538-38811557 Msa0950470:intron 35.0%
AAAAATTTGCAGCTCTCTTG+TGG + chr6_3:38811607-38811626 None:intergenic 35.0%
! ACAAGAGAGCTGCAAATTTT+TGG - chr6_3:38811606-38811625 Msa0950470:intron 35.0%
! CAAGAGAGCTGCAAATTTTT+GGG - chr6_3:38811607-38811626 Msa0950470:intron 35.0%
GTTATTGGGATGGTATATTG+AGG + chr6_3:38811867-38811886 None:intergenic 35.0%
TCTTCGCAAACTAGGTTATT+GGG + chr6_3:38811881-38811900 None:intergenic 35.0%
ATCTTCGCAAACTAGGTTAT+TGG + chr6_3:38811882-38811901 None:intergenic 35.0%
! AATAACCTAGTTTGCGAAGA+TGG - chr6_3:38811881-38811900 Msa0950470:intron 35.0%
! ATAACCTAGTTTGCGAAGAT+GGG - chr6_3:38811882-38811901 Msa0950470:intron 35.0%
AACTTATCATTCTCCACATG+AGG - chr6_3:38811986-38812005 Msa0950470:intron 35.0%
!!! GTATTGCTGATTCCATTTTG+TGG + chr6_3:38812024-38812043 None:intergenic 35.0%
ATGGAATCAGCAATACCAAT+AGG - chr6_3:38812028-38812047 Msa0950470:intron 35.0%
TTGATTCCACTCTTTCGAAA+AGG - chr6_3:38812072-38812091 Msa0950470:intron 35.0%
TGATTCCACTCTTTCGAAAA+GGG - chr6_3:38812073-38812092 Msa0950470:intron 35.0%
AGAATTGATCCAAACATTCC+CGG + chr6_3:38812142-38812161 None:intergenic 35.0%
TGGATCAATTCTTTCTCCAT+TGG - chr6_3:38812150-38812169 Msa0950470:intron 35.0%
AAAGCAAGATTTCTTGTTCG+AGG + chr6_3:38812237-38812256 None:intergenic 35.0%
GAACAAGAAATCTTGCTTTG+AGG - chr6_3:38812238-38812257 Msa0950470:intron 35.0%
AATACATTGCCTCGAAAATG+CGG - chr6_3:38812325-38812344 Msa0950470:intron 35.0%
CTATGCACAAGAAATATGGT+GGG + chr6_3:38812440-38812459 None:intergenic 35.0%
TCTATGCACAAGAAATATGG+TGG + chr6_3:38812441-38812460 None:intergenic 35.0%
!! TTTTATTTCAGATTCGCAGG+TGG + chr6_3:38812744-38812763 None:intergenic 35.0%
TCTCTAAACTTAACCCATTC+CGG - chr6_3:38812854-38812873 Msa0950470:intron 35.0%
! TGATTTTACGGAATAAACCC+AGG - chr6_3:38813044-38813063 Msa0950470:intron 35.0%
! TACTAACCTATTCAGGTTCT+AGG - chr6_3:38813428-38813447 Msa0950470:intron 35.0%
ATGGGTAGATTTCCAAAGTT+TGG + chr6_3:38813564-38813583 None:intergenic 35.0%
CTACCCATGAATTACTTTCA+TGG - chr6_3:38813576-38813595 Msa0950470:intron 35.0%
ATATGTAATGGCACCTAAGT+TGG - chr6_3:38813641-38813660 Msa0950470:intron 35.0%
GTTTATGTTACCATCCATGT+TGG - chr6_3:38813726-38813745 Msa0950470:intron 35.0%
! GAGGATCCTAGAAACAATTT+TGG - chr6_3:38813748-38813767 Msa0950470:intron 35.0%
! ATGTGGCCAAAATTGTTTCT+AGG + chr6_3:38813757-38813776 None:intergenic 35.0%
!! GTAACCAATTTTGGTAACCA+AGG - chr6_3:38813865-38813884 Msa0950470:intron 35.0%
TTATGTTAGTGTAGACGTTG+GGG + chr6_3:38813965-38813984 None:intergenic 35.0%
GTTTATGTTAGTGTAGACGT+TGG + chr6_3:38813967-38813986 None:intergenic 35.0%
AAATTCTATCCTCCAACCTT+AGG - chr6_3:38814088-38814107 Msa0950470:intron 35.0%
TGGTATAGTTTACTACCCAA+AGG - chr6_3:38814229-38814248 Msa0950470:intron 35.0%
TATAGTTTACTACCCAAAGG+TGG - chr6_3:38814232-38814251 Msa0950470:intron 35.0%
ATAGTTTACTACCCAAAGGT+GGG - chr6_3:38814233-38814252 Msa0950470:intron 35.0%
TAGTTAGAAAACCCACCTTT+GGG + chr6_3:38814247-38814266 None:intergenic 35.0%
TTAGTTAGAAAACCCACCTT+TGG + chr6_3:38814248-38814267 None:intergenic 35.0%
!! AAGGTGGGTTTTCTAACTAA+AGG - chr6_3:38814248-38814267 Msa0950470:intron 35.0%
!!! GTTTTGGAGAAAAGTGCTTA+TGG + chr6_3:38814340-38814359 None:intergenic 35.0%
GAAAGTTGTTCATAGGTGTT+TGG + chr6_3:38814426-38814445 None:intergenic 35.0%
AACACCTATGAACAACTTTC+AGG - chr6_3:38814426-38814445 Msa0950470:intron 35.0%
ATGACCTGAAAGTTGTTCAT+AGG + chr6_3:38814433-38814452 None:intergenic 35.0%
AGAAAAAGCTATACGGGTTT+GGG + chr6_3:38814504-38814523 None:intergenic 35.0%
ATCTGCAGAAAAAGCTATAC+GGG + chr6_3:38814510-38814529 None:intergenic 35.0%
! ATATGTGATGTTTTCGTCAC+GGG + chr6_3:38814677-38814696 None:intergenic 35.0%
TCACTTATAACCACATCTAG+CGG - chr6_3:38814741-38814760 Msa0950470:intron 35.0%
GAGCTATGGAATCATATTCA+AGG + chr6_3:38814887-38814906 None:intergenic 35.0%
CAATTATGTTGTGGTGATTG+TGG + chr6_3:38814933-38814952 None:intergenic 35.0%
CCATGTGTGGAATAATAACT+AGG + chr6_3:38815062-38815081 None:intergenic 35.0%
CCTAGTTATTATTCCACACA+TGG - chr6_3:38815059-38815078 Msa0950470:intron 35.0%
AATTGGAAAAATGAGAGGAG+AGG - chr6_3:38815140-38815159 Msa0950470:intron 35.0%
ATTGGAAAAATGAGAGGAGA+GGG - chr6_3:38815141-38815160 Msa0950470:intron 35.0%
GATTGAGCTAAATGGAGAAA+AGG - chr6_3:38815166-38815185 Msa0950470:intron 35.0%
GATTGAATGAATTTGGAGGT+TGG - chr6_3:38815268-38815287 Msa0950470:intron 35.0%
CCCTTGCTAAAAAAATCTCA+TGG - chr6_3:38815438-38815457 Msa0950470:intron 35.0%
! AAATGACAGTGTTGTTAAGC+GGG - chr6_3:38815488-38815507 Msa0950470:intron 35.0%
!! TGATGAATTCTTTTTGGTGG+GGG + chr6_3:38815525-38815544 None:intergenic 35.0%
TAGAGATGATTGAATTGGGT+AGG - chr6_3:38815557-38815576 Msa0950470:intron 35.0%
ACAGTCTACAAAAGAAGGTA+GGG + chr6_3:38815638-38815657 None:intergenic 35.0%
TACAGTCTACAAAAGAAGGT+AGG + chr6_3:38815639-38815658 None:intergenic 35.0%
GAATAGCACAAAAGGACTTA+TGG - chr6_3:38815865-38815884 Msa0950470:intron 35.0%
AACAATGCTTTATCTGGTGA+AGG + chr6_3:38815920-38815939 None:intergenic 35.0%
!! TCACCAGATAAAGCATTGTT+AGG - chr6_3:38815920-38815939 Msa0950470:intron 35.0%
AACAAAGGGTTATGGACTTA+TGG + chr6_3:38816136-38816155 None:intergenic 35.0%
! AAAGTGTCAACAAAGGGTTA+TGG + chr6_3:38816144-38816163 None:intergenic 35.0%
GGGAGTTAAGTTAAAACCTA+TGG + chr6_3:38816243-38816262 None:intergenic 35.0%
CCCTTTAATCCATAATGACA+TGG - chr6_3:38816270-38816289 Msa0950470:intron 35.0%
! CCCATGTCATTATGGATTAA+AGG + chr6_3:38816274-38816293 None:intergenic 35.0%
!! TCTTGATGGAATGTTGATTC+AGG + chr6_3:38816318-38816337 None:intergenic 35.0%
ACAACTAAGGATAGAGTTGT+TGG - chr6_3:38816446-38816465 Msa0950470:intron 35.0%
GTGATAAATCTTCTGTGTTC+GGG - chr6_3:38816574-38816593 Msa0950470:intron 35.0%
! CTTAGCATATAGGGAGTTTT+GGG - chr6_3:38816597-38816616 Msa0950470:intron 35.0%
TGAATGTCTTATGCTTTCTC+AGG - chr6_3:38816897-38816916 Msa0950470:intron 35.0%
ACCTTATGGTGATTGTTATC+TGG + chr6_3:38816927-38816946 None:intergenic 35.0%
CACTACAGAACGGTAATAAA+TGG - chr6_3:38817033-38817052 Msa0950470:intron 35.0%
! ACTTGATGATCCTTTCTCAT+AGG + chr6_3:38817139-38817158 None:intergenic 35.0%
TATGAGAAAGGATCATCAAG+TGG - chr6_3:38817138-38817157 Msa0950470:CDS 35.0%
TATTAACACAATACTCCCTC+CGG - chr6_3:38817407-38817426 Msa0950470:five_prime_UTR 35.0%
! GTAAGTGAGAGTGCAACATT+TGG + chr6_3:38809388-38809407 None:intergenic 40.0%
GGAGGTTTGTGAAGAGAAAT+TGG + chr6_3:38809421-38809440 None:intergenic 40.0%
!! GGTGGGTTGTTAAGGAAATT+GGG + chr6_3:38809442-38809461 None:intergenic 40.0%
!! TGGTGGGTTGTTAAGGAAAT+TGG + chr6_3:38809443-38809462 None:intergenic 40.0%
!! AGAAAAGTGGTGGGTTGTTA+AGG + chr6_3:38809450-38809469 None:intergenic 40.0%
AGATGGTGAAGAAAAGTGGT+GGG + chr6_3:38809459-38809478 None:intergenic 40.0%
!! GCTTAATTCCACTTTTGCAG+TGG + chr6_3:38809570-38809589 None:intergenic 40.0%
GACACAATTGGCAAAAGATG+TGG + chr6_3:38810065-38810084 None:intergenic 40.0%
AGCACAATTGAACACAACGA+TGG - chr6_3:38810203-38810222 Msa0950470:intron 40.0%
GCACAATTGAACACAACGAT+GGG - chr6_3:38810204-38810223 Msa0950470:intron 40.0%
CACAATTGAACACAACGATG+GGG - chr6_3:38810205-38810224 Msa0950470:intron 40.0%
ATGGGGTGCAAAATCAGAAA+GGG - chr6_3:38810222-38810241 Msa0950470:intron 40.0%
!! ACCGACTTGTATTATGGCAA+AGG + chr6_3:38810528-38810547 None:intergenic 40.0%
TAAATGGTGAGCTGCTTCAT+TGG - chr6_3:38811001-38811020 Msa0950470:intron 40.0%
! ACTTAGTGTTGAAGATCTGG+CGG - chr6_3:38811060-38811079 Msa0950470:intron 40.0%
TGATATCACGAAATTTGGCC+AGG + chr6_3:38811099-38811118 None:intergenic 40.0%
CTAGAATGGTTGGGTTACAT+GGG + chr6_3:38811188-38811207 None:intergenic 40.0%
! TCTAGAATGGTTGGGTTACA+TGG + chr6_3:38811189-38811208 None:intergenic 40.0%
!! CCTTTATGCTCTAGAATGGT+TGG + chr6_3:38811198-38811217 None:intergenic 40.0%
!! CCAACCATTCTAGAGCATAA+AGG - chr6_3:38811195-38811214 Msa0950470:intron 40.0%
!! GTAGCCTTTATGCTCTAGAA+TGG + chr6_3:38811202-38811221 None:intergenic 40.0%
TCCTATTCCAATTCTAGTGG+GGG + chr6_3:38811224-38811243 None:intergenic 40.0%
GTCCTATTCCAATTCTAGTG+GGG + chr6_3:38811225-38811244 None:intergenic 40.0%
GTGTCCTATTCCAATTCTAG+TGG + chr6_3:38811227-38811246 None:intergenic 40.0%
AGAATTGGAATAGGACACAC+AGG - chr6_3:38811229-38811248 Msa0950470:intron 40.0%
GAATTGGAATAGGACACACA+GGG - chr6_3:38811230-38811249 Msa0950470:intron 40.0%
AATTGGAATAGGACACACAG+GGG - chr6_3:38811231-38811250 Msa0950470:intron 40.0%
TGCCAACAAAGTTCAGTTGT+AGG - chr6_3:38811383-38811402 Msa0950470:intron 40.0%
CTCCTACAACTGAACTTTGT+TGG + chr6_3:38811388-38811407 None:intergenic 40.0%
ACAAAGTTCAGTTGTAGGAG+AGG - chr6_3:38811388-38811407 Msa0950470:intron 40.0%
! AATTACCTCGCGACAGTTTT+TGG - chr6_3:38811630-38811649 Msa0950470:intron 40.0%
GGACTTGGAGACATCATTAA+TGG + chr6_3:38811704-38811723 None:intergenic 40.0%
! CAGGTGTTCTTTTTCTATGC+AGG + chr6_3:38811741-38811760 None:intergenic 40.0%
GCATAGAAAAAGAACACCTG+TGG - chr6_3:38811741-38811760 Msa0950470:intron 40.0%
TAGAAAAAGAACACCTGTGG+TGG - chr6_3:38811744-38811763 Msa0950470:intron 40.0%
AGAAAAAGAACACCTGTGGT+GGG - chr6_3:38811745-38811764 Msa0950470:intron 40.0%
ATTTCCCATCTTCGCAAACT+AGG + chr6_3:38811889-38811908 None:intergenic 40.0%
CAAAAGAGGAGTCCACAAAA+TGG - chr6_3:38812009-38812028 Msa0950470:intron 40.0%
GATTCCACTCTTTCGAAAAG+GGG - chr6_3:38812074-38812093 Msa0950470:intron 40.0%
GCAATTTCTCGAGAACTTCT+CGG + chr6_3:38812116-38812135 None:intergenic 40.0%
GTTCTCGAGAAATTGCAATC+CGG - chr6_3:38812120-38812139 Msa0950470:intron 40.0%
TTCTCGAGAAATTGCAATCC+GGG - chr6_3:38812121-38812140 Msa0950470:intron 40.0%
AATTGCAATCCGGGAATGTT+TGG - chr6_3:38812130-38812149 Msa0950470:intron 40.0%
ATCTTGTTCTCAATGAACCG+TGG + chr6_3:38812180-38812199 None:intergenic 40.0%
AAGATTTCTTGTTCGAGGTG+GGG + chr6_3:38812232-38812251 None:intergenic 40.0%
CAAGATTTCTTGTTCGAGGT+GGG + chr6_3:38812233-38812252 None:intergenic 40.0%
AACCCAAGTTATGTTTGGAG+GGG + chr6_3:38812267-38812286 None:intergenic 40.0%
CAACCCAAGTTATGTTTGGA+GGG + chr6_3:38812268-38812287 None:intergenic 40.0%
ACAACCCAAGTTATGTTTGG+AGG + chr6_3:38812269-38812288 None:intergenic 40.0%
! TCCAAACATAACTTGGGTTG+TGG - chr6_3:38812268-38812287 Msa0950470:intron 40.0%
! AGTTTTCTTTCAGCCAGTGT+GGG + chr6_3:38812294-38812313 None:intergenic 40.0%
! TAGTTTTCTTTCAGCCAGTG+TGG + chr6_3:38812295-38812314 None:intergenic 40.0%
CTGAAAGAAAACTACGCGTA+GGG - chr6_3:38812301-38812320 Msa0950470:intron 40.0%
ATACATTGCCTCGAAAATGC+GGG - chr6_3:38812326-38812345 Msa0950470:intron 40.0%
TGGAAAATCCTTACGAAACC+GGG + chr6_3:38812363-38812382 None:intergenic 40.0%
CTGGAAAATCCTTACGAAAC+CGG + chr6_3:38812364-38812383 None:intergenic 40.0%
GCTTTCAATTTGGCGATGTT+AGG + chr6_3:38812396-38812415 None:intergenic 40.0%
GGGTTAAGTTTAGAGACAGA+TGG + chr6_3:38812850-38812869 None:intergenic 40.0%
CTCTAAACTTAACCCATTCC+GGG - chr6_3:38812855-38812874 Msa0950470:intron 40.0%
GAACAGTATAAACCCGGAAT+GGG + chr6_3:38812870-38812889 None:intergenic 40.0%
AGAACAGTATAAACCCGGAA+TGG + chr6_3:38812871-38812890 None:intergenic 40.0%
ATCATGCATAACTGAGCGAT+CGG - chr6_3:38812891-38812910 Msa0950470:intron 40.0%
! TTTTACGGAATAAACCCAGG+TGG - chr6_3:38813047-38813066 Msa0950470:intron 40.0%
TCAGAGTGGAATAAATTCCG+GGG + chr6_3:38813078-38813097 None:intergenic 40.0%
GTCAGAGTGGAATAAATTCC+GGG + chr6_3:38813079-38813098 None:intergenic 40.0%
GGTCAGAGTGGAATAAATTC+CGG + chr6_3:38813080-38813099 None:intergenic 40.0%
GGAATTTATTCCACTCTGAC+CGG - chr6_3:38813079-38813098 Msa0950470:intron 40.0%
GAAATTAATACCGGTCAGAG+TGG + chr6_3:38813092-38813111 None:intergenic 40.0%
GACCGGTATTAATTTCCAAC+TGG - chr6_3:38813096-38813115 Msa0950470:intron 40.0%
CGCCAGTTGGAAATTAATAC+CGG + chr6_3:38813101-38813120 None:intergenic 40.0%
GATATGCCTAGAACCTGAAT+AGG + chr6_3:38813437-38813456 None:intergenic 40.0%
TATGTTACCATCCATGTTGG+AGG - chr6_3:38813729-38813748 Msa0950470:intron 40.0%
CTTGCCTTGGTTACCAAAAT+TGG + chr6_3:38813872-38813891 None:intergenic 40.0%
TATGTTAGTGTAGACGTTGG+GGG + chr6_3:38813964-38813983 None:intergenic 40.0%
TACCACTTTAGTCCTAAGGT+TGG + chr6_3:38814103-38814122 None:intergenic 40.0%
GCAATACCACTTTAGTCCTA+AGG + chr6_3:38814107-38814126 None:intergenic 40.0%
TCATAGGTGTTTGGTTGTGT+CGG + chr6_3:38814417-38814436 None:intergenic 40.0%
CAGAAAAAGCTATACGGGTT+TGG + chr6_3:38814505-38814524 None:intergenic 40.0%
TGTGAATTAACCGCTAGATG+TGG + chr6_3:38814754-38814773 None:intergenic 40.0%
GTTTGATGCATAAGGAGCTA+TGG + chr6_3:38814901-38814920 None:intergenic 40.0%
CAAAGTGACATTAGAGGTGA+TGG - chr6_3:38814984-38815003 Msa0950470:intron 40.0%
TTGGAAAAATGAGAGGAGAG+GGG - chr6_3:38815142-38815161 Msa0950470:intron 40.0%
TGCATATGAGTTCTTAGGAG+TGG + chr6_3:38815223-38815242 None:intergenic 40.0%
AATTTGGAGGTTGGGATTCA+TGG - chr6_3:38815277-38815296 Msa0950470:intron 40.0%
AATGCTTTATCTGGTGAAGG+TGG + chr6_3:38815917-38815936 None:intergenic 40.0%
GCTCCTAACAATGCTTTATC+TGG + chr6_3:38815926-38815945 None:intergenic 40.0%
AGCATTGTTAGGAGCAGTTA+TGG - chr6_3:38815931-38815950 Msa0950470:intron 40.0%
ATGATCACCCCATGTCATTA+TGG + chr6_3:38816282-38816301 None:intergenic 40.0%
ATTCCATCAAGATGCGAGTT+GGG - chr6_3:38816326-38816345 Msa0950470:intron 40.0%
AGTTGTGTACCTTTGTGTTG+TGG - chr6_3:38816406-38816425 Msa0950470:intron 40.0%
GATTTCGACATTGATACCCA+CGG + chr6_3:38816498-38816517 None:intergenic 40.0%
GTGGGTATCAATGTCGAAAT+CGG - chr6_3:38816497-38816516 Msa0950470:intron 40.0%
AAGCAAAAGCTTGACACGAT+TGG - chr6_3:38816547-38816566 Msa0950470:intron 40.0%
! GCTTAGCATATAGGGAGTTT+TGG - chr6_3:38816596-38816615 Msa0950470:intron 40.0%
!!! TATAGGGAGTTTTGGGTCTT+AGG - chr6_3:38816604-38816623 Msa0950470:intron 40.0%
GCCAGATAACAATCACCATA+AGG - chr6_3:38816923-38816942 Msa0950470:intron 40.0%
!! AGTTTAGGGAAGGTACCTTA+TGG + chr6_3:38816941-38816960 None:intergenic 40.0%
CATGTAGCAGTAGCAACTAT+TGG + chr6_3:38817283-38817302 None:intergenic 40.0%
TAGTTGCTACTGCTACATGT+TGG - chr6_3:38817284-38817303 Msa0950470:CDS 40.0%
CTCTTATAAATAGGACCGGA+GGG + chr6_3:38817425-38817444 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG + chr6_3:38817426-38817445 None:intergenic 40.0%
GGGTTGTTAAGGAAATTGGG+AGG + chr6_3:38809439-38809458 None:intergenic 45.0%
GAGATGGTGAAGAAAAGTGG+TGG + chr6_3:38809460-38809479 None:intergenic 45.0%
GTGGAGATGGTGAAGAAAAG+TGG + chr6_3:38809463-38809482 None:intergenic 45.0%
GATGGGGTGCAAAATCAGAA+AGG - chr6_3:38810221-38810240 Msa0950470:intron 45.0%
TGGGGTGCAAAATCAGAAAG+GGG - chr6_3:38810223-38810242 Msa0950470:intron 45.0%
TCAGAAAGGGGGCAAAAAGA+TGG - chr6_3:38810235-38810254 Msa0950470:intron 45.0%
CAGAAAGGGGGCAAAAAGAT+GGG - chr6_3:38810236-38810255 Msa0950470:intron 45.0%
AGAAAGGGGGCAAAAAGATG+GGG - chr6_3:38810237-38810256 Msa0950470:intron 45.0%
AATGGAGCAACCTCGCTAAA+TGG - chr6_3:38810985-38811004 Msa0950470:intron 45.0%
ACCCCCACTAGAATTGGAAT+AGG - chr6_3:38811220-38811239 Msa0950470:intron 45.0%
! GTGTCTCTGTGCTTGCTAAA+GGG + chr6_3:38811267-38811286 None:intergenic 45.0%
! CATTTAAAATGACCCTGCCG+AGG - chr6_3:38811356-38811375 Msa0950470:intron 45.0%
TCTTCTTCGAGTGAAGCTAG+TGG + chr6_3:38811419-38811438 None:intergenic 45.0%
! GAAGCAGCAAGAGTATGTTG+TGG - chr6_3:38811437-38811456 Msa0950470:intron 45.0%
! GTGTGACAAAGAAGTGGACT+TGG + chr6_3:38811719-38811738 None:intergenic 45.0%
ATGCAGGTGTGACAAAGAAG+TGG + chr6_3:38811725-38811744 None:intergenic 45.0%
GAAAAAGAACACCTGTGGTG+GGG - chr6_3:38811746-38811765 Msa0950470:intron 45.0%
CACGTTAGACTCCAAGACAA+AGG + chr6_3:38811781-38811800 None:intergenic 45.0%
TCTTGGAGTCTAACGTGTGT+TGG - chr6_3:38811784-38811803 Msa0950470:intron 45.0%
CGCAAACTAGGTTATTGGGA+TGG + chr6_3:38811877-38811896 None:intergenic 45.0%
TTCTCCACATGAGGCAAAAG+AGG - chr6_3:38811995-38812014 Msa0950470:intron 45.0%
! TTCACCCCTTTTCGAAAGAG+TGG + chr6_3:38812081-38812100 None:intergenic 45.0%
GCAAGATTTCTTGTTCGAGG+TGG + chr6_3:38812234-38812253 None:intergenic 45.0%
ATGCCCCTCCAAACATAACT+TGG - chr6_3:38812261-38812280 Msa0950470:intron 45.0%
TGCCCCTCCAAACATAACTT+GGG - chr6_3:38812262-38812281 Msa0950470:intron 45.0%
GCCACAACCCAAGTTATGTT+TGG + chr6_3:38812272-38812291 None:intergenic 45.0%
GCTGAAAGAAAACTACGCGT+AGG - chr6_3:38812300-38812319 Msa0950470:intron 45.0%
TTGGCGATGTTAGGTAAGCA+AGG + chr6_3:38812387-38812406 None:intergenic 45.0%
CTAATTCTCGTGGTATCCAC+TGG + chr6_3:38812482-38812501 None:intergenic 45.0%
CAGTGGATACCACGAGAATT+AGG - chr6_3:38812480-38812499 Msa0950470:intron 45.0%
GATGAAGTAGCAGAAGAAGC+TGG + chr6_3:38812700-38812719 None:intergenic 45.0%
TTCCACCTATCCTAGGTTGT+AGG - chr6_3:38812801-38812820 Msa0950470:intron 45.0%
GATTGCCTACAACCTAGGAT+AGG + chr6_3:38812809-38812828 None:intergenic 45.0%
CTAGGTTGTAGGCAATCACA+GGG - chr6_3:38812812-38812831 Msa0950470:intron 45.0%
TCATGCATAACTGAGCGATC+GGG - chr6_3:38812892-38812911 Msa0950470:intron 45.0%
CCACAATAATCAGAGGAGTC+CGG + chr6_3:38813145-38813164 None:intergenic 45.0%
CGGACTCCTCTGATTATTGT+GGG - chr6_3:38813143-38813162 Msa0950470:intron 45.0%
GGACTCCTCTGATTATTGTG+GGG - chr6_3:38813144-38813163 Msa0950470:intron 45.0%
GATGACCCCACAATAATCAG+AGG + chr6_3:38813152-38813171 None:intergenic 45.0%
TTATTGTGGGGTCATCCTCA+CGG - chr6_3:38813156-38813175 Msa0950470:intron 45.0%
AACCTTTCGTATCCAACTGG+CGG - chr6_3:38813203-38813222 Msa0950470:intron 45.0%
ATCCTCAACTCCACTACTGA+CGG - chr6_3:38813296-38813315 Msa0950470:intron 45.0%
!! GTTTCTAGGATCCTCCAACA+TGG + chr6_3:38813743-38813762 None:intergenic 45.0%
TTGGGGGAAATTGGTAGACA+AGG + chr6_3:38813948-38813967 None:intergenic 45.0%
CACTTTAGTCCTAAGGTTGG+AGG + chr6_3:38814100-38814119 None:intergenic 45.0%
CTCCAACCTTAGGACTAAAG+TGG - chr6_3:38814098-38814117 Msa0950470:intron 45.0%
! CTCACCTTGACATTTTTCCG+AGG - chr6_3:38814273-38814292 Msa0950470:intron 45.0%
GAGACCTCGGAAAAATGTCA+AGG + chr6_3:38814280-38814299 None:intergenic 45.0%
AATGAATTCGGAACACGCAG+AGG + chr6_3:38814383-38814402 None:intergenic 45.0%
!! TGGTTGTGTCGGTTGAAGTT+TGG + chr6_3:38814406-38814425 None:intergenic 45.0%
ACGGGTTTGAATGTGTAACC+TGG + chr6_3:38814659-38814678 None:intergenic 45.0%
! AGTGACATTAGAGGTGATGG+TGG - chr6_3:38814987-38815006 Msa0950470:intron 45.0%
!! ACATTAGAGGTGATGGTGGT+GGG - chr6_3:38814991-38815010 Msa0950470:intron 45.0%
!!! CTTTTTGGAGCAACCATGTG+TGG + chr6_3:38815075-38815094 None:intergenic 45.0%
! TTGGGATTCATGGTGGTGAA+GGG - chr6_3:38815287-38815306 Msa0950470:intron 45.0%
TTGTTAGGAGCAGTTATGGC+TGG - chr6_3:38815935-38815954 Msa0950470:intron 45.0%
ACATGGGGTGATCATTGATG+TGG - chr6_3:38816287-38816306 Msa0950470:intron 45.0%
CATGGGGTGATCATTGATGT+GGG - chr6_3:38816288-38816307 Msa0950470:intron 45.0%
!! GATGGAATGTTGATTCAGGC+AGG + chr6_3:38816314-38816333 None:intergenic 45.0%
CATTCCATCAAGATGCGAGT+TGG - chr6_3:38816325-38816344 Msa0950470:intron 45.0%
ATTCCCAACTCGCATCTTGA+TGG + chr6_3:38816332-38816351 None:intergenic 45.0%
! TTAAGCGTCAGAGTGTTTGC+TGG + chr6_3:38816356-38816375 None:intergenic 45.0%
TACCTTTGTGTTGTGGTCCT+AGG - chr6_3:38816413-38816432 Msa0950470:intron 45.0%
TGATACCCACGGTTTGTAAC+CGG + chr6_3:38816487-38816506 None:intergenic 45.0%
TGTGTTCGGGCTTAGCATAT+AGG - chr6_3:38816587-38816606 Msa0950470:intron 45.0%
GTGTTCGGGCTTAGCATATA+GGG - chr6_3:38816588-38816607 Msa0950470:intron 45.0%
!! CATAGGTGTTGAGTGCAAGT+TGG + chr6_3:38817122-38817141 None:intergenic 45.0%
GCACTCAACACCTATGAGAA+AGG - chr6_3:38817126-38817145 Msa0950470:CDS 45.0%
TATTTCCCACTATCCAGCGC+AGG - chr6_3:38809672-38809691 Msa0950470:CDS 50.0%
TTGATCCTGCGCTGGATAGT+GGG + chr6_3:38809680-38809699 None:intergenic 50.0%
TTTGATCCTGCGCTGGATAG+TGG + chr6_3:38809681-38809700 None:intergenic 50.0%
! TTGCTCTTTTGATCCTGCGC+TGG + chr6_3:38809688-38809707 None:intergenic 50.0%
AGGGGAAAAGGGGCAAAAGA+TGG - chr6_3:38810108-38810127 Msa0950470:intron 50.0%
GGGGAAAAGGGGCAAAAGAT+GGG - chr6_3:38810109-38810128 Msa0950470:intron 50.0%
GGGAAAAGGGGCAAAAGATG+GGG - chr6_3:38810110-38810129 Msa0950470:intron 50.0%
GGGGTGCAAAATCAGAAAGG+GGG - chr6_3:38810224-38810243 Msa0950470:intron 50.0%
AAGCAGCTCACCATTTAGCG+AGG + chr6_3:38810998-38811017 None:intergenic 50.0%
AAGGCTACCCCCACTAGAAT+TGG - chr6_3:38811214-38811233 Msa0950470:intron 50.0%
ATAGGACACACAGGGGTAAC+TGG - chr6_3:38811238-38811257 Msa0950470:intron 50.0%
TAGGACACACAGGGGTAACT+GGG - chr6_3:38811239-38811258 Msa0950470:intron 50.0%
! GGTGTCTCTGTGCTTGCTAA+AGG + chr6_3:38811268-38811287 None:intergenic 50.0%
TGTTGGCAAAATCCTCGGCA+GGG + chr6_3:38811371-38811390 None:intergenic 50.0%
TTGTTGGCAAAATCCTCGGC+AGG + chr6_3:38811372-38811391 None:intergenic 50.0%
TTTGGCCAACACCCCTCATA+TGG + chr6_3:38811486-38811505 None:intergenic 50.0%
CAGCTCTCTTGTGGAGTTTG+CGG + chr6_3:38811598-38811617 None:intergenic 50.0%
GTTCTCCAAAAACTGTCGCG+AGG + chr6_3:38811638-38811657 None:intergenic 50.0%
GGCACTACACTCCTTTGTCT+TGG - chr6_3:38811767-38811786 Msa0950470:intron 50.0%
! GACTCCTCTTTTGCCTCATG+TGG + chr6_3:38812002-38812021 None:intergenic 50.0%
TGTTCTCAATGAACCGTGGC+TGG + chr6_3:38812176-38812195 None:intergenic 50.0%
!! TCTGGTTTCCCGCATTTTCG+AGG + chr6_3:38812337-38812356 None:intergenic 50.0%
CGATGTTAGGTAAGCAAGGC+TGG + chr6_3:38812383-38812402 None:intergenic 50.0%
TGGTATCCACTGGATGTCGT+GGG + chr6_3:38812472-38812491 None:intergenic 50.0%
CACGATGGTCCTAATTCTCG+TGG + chr6_3:38812492-38812511 None:intergenic 50.0%
! TATGGGTGTTACAGGCACGA+TGG + chr6_3:38812507-38812526 None:intergenic 50.0%
AAAAGGGATTGGGGTGAGAC+AGG - chr6_3:38812765-38812784 Msa0950470:intron 50.0%
CAGTGAGTTCCACCTATCCT+AGG - chr6_3:38812794-38812813 Msa0950470:intron 50.0%
TGCCTACAACCTAGGATAGG+TGG + chr6_3:38812806-38812825 None:intergenic 50.0%
CCTGTGATTGCCTACAACCT+AGG + chr6_3:38812814-38812833 None:intergenic 50.0%
CCTAGGTTGTAGGCAATCAC+AGG - chr6_3:38812811-38812830 Msa0950470:intron 50.0%
TAGGCAATCACAGGGAACCT+AGG - chr6_3:38812820-38812839 Msa0950470:intron 50.0%
TAGAGACAGATGGCGATCCT+AGG + chr6_3:38812840-38812859 None:intergenic 50.0%
CATGCATAACTGAGCGATCG+GGG - chr6_3:38812893-38812912 Msa0950470:intron 50.0%
ATGCATAACTGAGCGATCGG+GGG - chr6_3:38812894-38812913 Msa0950470:intron 50.0%
CCGGACTCCTCTGATTATTG+TGG - chr6_3:38813142-38813161 Msa0950470:intron 50.0%
GGGAACCTTTCGTATCCAAC+TGG - chr6_3:38813200-38813219 Msa0950470:intron 50.0%
ACCTTTCGTATCCAACTGGC+GGG - chr6_3:38813204-38813223 Msa0950470:intron 50.0%
TCCTCAACTCCACTACTGAC+GGG - chr6_3:38813297-38813316 Msa0950470:intron 50.0%
CTAGGATCCTCCAACATGGA+TGG + chr6_3:38813739-38813758 None:intergenic 50.0%
GTGTAGACGTTGGGGGAAAT+TGG + chr6_3:38813957-38813976 None:intergenic 50.0%
TAATTGGGACCCAAGCAGCA+TGG + chr6_3:38814302-38814321 None:intergenic 50.0%
AAGCTATACGGGTTTGGGCA+TGG + chr6_3:38814499-38814518 None:intergenic 50.0%
!! GACATTAGAGGTGATGGTGG+TGG - chr6_3:38814990-38815009 Msa0950470:intron 50.0%
!! CATTAGAGGTGATGGTGGTG+GGG - chr6_3:38814992-38815011 Msa0950470:intron 50.0%
AGAGGGGCGATTGAGCTAAA+TGG - chr6_3:38815158-38815177 Msa0950470:intron 50.0%
TTGGAGGTTGGGATTCATGG+TGG - chr6_3:38815280-38815299 Msa0950470:intron 50.0%
! GTTGGGATTCATGGTGGTGA+AGG - chr6_3:38815286-38815305 Msa0950470:intron 50.0%
! GATTCATGGTGGTGAAGGGT+CGG - chr6_3:38815291-38815310 Msa0950470:intron 50.0%
AAGGGTCGGTTATGGCTAGA+GGG - chr6_3:38815305-38815324 Msa0950470:intron 50.0%
GTCCTAGGACCACAACACAA+AGG + chr6_3:38816418-38816437 None:intergenic 50.0%
AGTTGTTGGAGTAGTCGCTG+AGG - chr6_3:38816460-38816479 Msa0950470:intron 50.0%
GTTGTTGGAGTAGTCGCTGA+GGG - chr6_3:38816461-38816480 Msa0950470:intron 50.0%
CCCTCATATGGCAGCTAGGA+CGG + chr6_3:38811474-38811493 None:intergenic 55.0%
CCGTCCTAGCTGCCATATGA+GGG - chr6_3:38811471-38811490 Msa0950470:intron 55.0%
CGTCCTAGCTGCCATATGAG+GGG - chr6_3:38811472-38811491 Msa0950470:intron 55.0%
ACACCCCTCATATGGCAGCT+AGG + chr6_3:38811478-38811497 None:intergenic 55.0%
! AGCTGCCATATGAGGGGTGT+TGG - chr6_3:38811478-38811497 Msa0950470:intron 55.0%
CTTCGGCTACTGTTTCGGTG+AGG - chr6_3:38811543-38811562 Msa0950470:intron 55.0%
CTTTCTCCATTGGCCAGCCA+CGG - chr6_3:38812160-38812179 Msa0950470:intron 55.0%
! AATGAACCGTGGCTGGCCAA+TGG + chr6_3:38812169-38812188 None:intergenic 55.0%
TTGTTCGAGGTGGGGATCGT+TGG + chr6_3:38812224-38812243 None:intergenic 55.0%
ATGCGGGAAACCAGATAGCC+CGG - chr6_3:38812342-38812361 Msa0950470:intron 55.0%
CCTTACGAAACCGGGCTATC+TGG + chr6_3:38812355-38812374 None:intergenic 55.0%
CCAGATAGCCCGGTTTCGTA+AGG - chr6_3:38812352-38812371 Msa0950470:intron 55.0%
ACTTCTCCCACGACATCCAG+TGG - chr6_3:38812463-38812482 Msa0950470:intron 55.0%
GTGGTATCCACTGGATGTCG+TGG + chr6_3:38812473-38812492 None:intergenic 55.0%
TGGTGCGCACGCTGAACATT+TGG + chr6_3:38812724-38812743 None:intergenic 55.0%
TGAGCGATCGGGGGATAACT+AGG - chr6_3:38812903-38812922 Msa0950470:intron 55.0%
AAACCCAGGTGGAGTAACCC+CGG - chr6_3:38813058-38813077 Msa0950470:intron 55.0%
ATTCCGGGGTTACTCCACCT+GGG + chr6_3:38813064-38813083 None:intergenic 55.0%
AATTCCGGGGTTACTCCACC+TGG + chr6_3:38813065-38813084 None:intergenic 55.0%
TCAGTTGGGTTCTCGCCAGT+TGG + chr6_3:38813114-38813133 None:intergenic 55.0%
ACTGGCGAGAACCCAACTGA+CGG - chr6_3:38813114-38813133 Msa0950470:intron 55.0%
AACCCAACTGACGGGGATAC+CGG - chr6_3:38813123-38813142 Msa0950470:intron 55.0%
ATAGTGCCCGTTCCAACTGG+CGG - chr6_3:38813179-38813198 Msa0950470:intron 55.0%
AAGGTTCCCGCCAGTTGGAA+CGG + chr6_3:38813189-38813208 None:intergenic 55.0%
TACGAAAGGTTCCCGCCAGT+TGG + chr6_3:38813194-38813213 None:intergenic 55.0%
TCCCGCCAGTTGGATACGAA+AGG + chr6_3:38813208-38813227 None:intergenic 55.0%
CCTCAACTCCACTACTGACG+GGG - chr6_3:38813298-38813317 Msa0950470:intron 55.0%
CTCTATCTCCCCGTCAGTAG+TGG + chr6_3:38813309-38813328 None:intergenic 55.0%
CTACTGACGGGGAGATAGAG+AGG - chr6_3:38813309-38813328 Msa0950470:intron 55.0%
CACGCAGAGGCCATAAGTTG+TGG + chr6_3:38814370-38814389 None:intergenic 55.0%
! TGGTGGTGAAGGGTCGGTTA+TGG - chr6_3:38815297-38815316 Msa0950470:intron 55.0%
GAAGGGTCGGTTATGGCTAG+AGG - chr6_3:38815304-38815323 Msa0950470:intron 55.0%
GTCGGTTATGGCTAGAGGGA+AGG - chr6_3:38815309-38815328 Msa0950470:intron 55.0%
GGTTATGGCTAGAGGGAAGG+AGG - chr6_3:38815312-38815331 Msa0950470:intron 55.0%
GGCGGCATGTAGAGAGAACC+TGG - chr6_3:38811078-38811097 Msa0950470:intron 60.0%
TATGGCAGCTAGGACGGCAC+AGG + chr6_3:38811468-38811487 None:intergenic 60.0%
GCCGTCCTAGCTGCCATATG+AGG - chr6_3:38811470-38811489 Msa0950470:intron 60.0%
GGTGGGGATCGTTGGTGCAT+TGG + chr6_3:38812216-38812235 None:intergenic 60.0%
! ACTTGGGTTGTGGCCCACAC+TGG - chr6_3:38812278-38812297 Msa0950470:intron 60.0%
CTGGCGAGAACCCAACTGAC+GGG - chr6_3:38813115-38813134 Msa0950470:intron 60.0%
TGGCGAGAACCCAACTGACG+GGG - chr6_3:38813116-38813135 Msa0950470:intron 60.0%
GTCCGGTATCCCCGTCAGTT+GGG + chr6_3:38813128-38813147 None:intergenic 60.0%
AGTCCGGTATCCCCGTCAGT+TGG + chr6_3:38813129-38813148 None:intergenic 60.0%
TGGAACGGGCACTATCCGTG+AGG + chr6_3:38813174-38813193 None:intergenic 60.0%
CGGATAGTGCCCGTTCCAAC+TGG - chr6_3:38813176-38813195 Msa0950470:intron 60.0%
TAGTGCCCGTTCCAACTGGC+GGG - chr6_3:38813180-38813199 Msa0950470:intron 60.0%
AGGTTCCCGCCAGTTGGAAC+GGG + chr6_3:38813188-38813207 None:intergenic 60.0%
GCTTTCGCTATCCCGCCAGT+TGG + chr6_3:38813218-38813237 None:intergenic 60.0%
! CCCCGTCAGTAGTGGAGTTG+AGG + chr6_3:38813301-38813320 None:intergenic 60.0%
TCCGAGGTCTCCATGCTGCT+TGG - chr6_3:38814289-38814308 Msa0950470:intron 60.0%
CCCAAGCAGCATGGAGACCT+CGG + chr6_3:38814293-38814312 None:intergenic 60.0%
! CCGAGGTCTCCATGCTGCTT+GGG - chr6_3:38814290-38814309 Msa0950470:intron 60.0%
TTGGAGTAGTCGCTGAGGGC+CGG - chr6_3:38816465-38816484 Msa0950470:intron 60.0%
TGAGGGCCGGTTACAAACCG+TGG - chr6_3:38816478-38816497 Msa0950470:intron 60.0%
GAGGGCCGGTTACAAACCGT+GGG - chr6_3:38816479-38816498 Msa0950470:intron 60.0%
GGAGTGTAGTGCCCCACCAC+AGG + chr6_3:38811760-38811779 None:intergenic 65.0%
GAGGCTGCGAGTTCCTCCGA+AGG + chr6_3:38811848-38811867 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 38809336 38817452 38809336 ID=Msa0950470;Name=Msa0950470
chr6_3 mRNA 38809336 38817452 38809336 ID=Msa0950470-mRNA-1;Parent=Msa0950470;Name=Msa0950470-mRNA-1;_AED=0.01;_eAED=0.01;_QI=53|1|1|1|0.66|0.75|4|180|264
chr6_3 exon 38809336 38809747 38809336 ID=Msa0950470-mRNA-1:exon:9435;Parent=Msa0950470-mRNA-1
chr6_3 exon 38809844 38809869 38809844 ID=Msa0950470-mRNA-1:exon:9434;Parent=Msa0950470-mRNA-1
chr6_3 exon 38810749 38810958 38810749 ID=Msa0950470-mRNA-1:exon:9433;Parent=Msa0950470-mRNA-1
chr6_3 exon 38817073 38817452 38817073 ID=Msa0950470-mRNA-1:exon:9432;Parent=Msa0950470-mRNA-1
chr6_3 five_prime_UTR 38817400 38817452 38817400 ID=Msa0950470-mRNA-1:five_prime_utr;Parent=Msa0950470-mRNA-1
chr6_3 CDS 38817073 38817399 38817073 ID=Msa0950470-mRNA-1:cds;Parent=Msa0950470-mRNA-1
chr6_3 CDS 38810749 38810958 38810749 ID=Msa0950470-mRNA-1:cds;Parent=Msa0950470-mRNA-1
chr6_3 CDS 38809844 38809869 38809844 ID=Msa0950470-mRNA-1:cds;Parent=Msa0950470-mRNA-1
chr6_3 CDS 38809516 38809747 38809516 ID=Msa0950470-mRNA-1:cds;Parent=Msa0950470-mRNA-1
chr6_3 three_prime_UTR 38809336 38809515 38809336 ID=Msa0950470-mRNA-1:three_prime_utr;Parent=Msa0950470-mRNA-1
Gene Sequence

>Msa0950470

ATGTTGCACTCTCACTTACACAATCATCACCAATTTCTCTTCACAAACCTCCCAATTTCCTTAACAACCCACCACTTTTCTTCACCATCTCCACTTCATAAATTTCAACATAATTTTCACTCTATTTCTGCCATTAATCCTTCTCATGAAGTATTTTTACCGTGGCTAAATAAATTAACCACTGCAAAAGTGGAATTAAGCCCCATTTTTGATGCTATAGATGACTCTTCTTCAAACCAAGTAACTATCAGTGTTGTTCTCTCTGTAGCCATTGCTGTTTTCTTATTTCCCACTATCCAGCGCAGGATCAAAAGAGCAAAACAATTGAAATATAGGTCTTCTGGAGTGAAGAAGTCATCATTGAATAGCACAAAAGGACTTATGGGATCAACTAAAAAGAAATCTAAGAATCCACCTTCACCAGATAAAGCATTGTTAGGAGCAGTTATGGCTGGTGTTATTGCTGTTATTCTCTATAAATTCACAACAACTATAGAAGCGTCTCTATATCGCCAAACAATTTCAGACAATTTCTCGGTTCGCCAGATAACAATCACCATAAGAACGGTAATAAATGGCTTATGCTACCTATCTACATTTGTGTATGGAATAAACTCTTTTGGTTTGTTGCTTTATTCTGGCCAACTTGCACTCAACACCTATGAGAAAGGATCATCAAGTGGAAAGAAAACTGAAAGCAAAATCATGGAGAATTCATACTTGTCAAATTCATCTAATGAGAATCACACAAATAGCAACAAAAATGAAGATCAAAGTTCAAATAATTCACAATAA

Protein sequence

>Msa0950470

MLHSHLHNHHQFLFTNLPISLTTHHFSSPSPLHKFQHNFHSISAINPSHEVFLPWLNKLTTAKVELSPIFDAIDDSSSNQVTISVVLSVAIAVFLFPTIQRRIKRAKQLKYRSSGVKKSSLNSTKGLMGSTKKKSKNPPSPDKALLGAVMAGVIAVILYKFTTTIEASLYRQTISDNFSVRQITITIRTVINGLCYLSTFVYGINSFGLLLYSGQLALNTYEKGSSSGKKTESKIMENSYLSNSSNENHTNSNKNEDQSSNNSQ*