Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432970 | XP_024633382.1 | 94.690 | 678 | 35 | 1 | 1 | 677 | 1 | 678 | 0.0 | 1312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432970 | sp|Q9SUU1|BOR7_ARATH | 68.203 | 651 | 194 | 4 | 4 | 642 | 7 | 656 | 0.0 | 927 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432970 | G7JBM4 | 94.690 | 678 | 35 | 1 | 1 | 677 | 1 | 678 | 0.0 | 1312 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037180 | Msa0432970 | 0.806230 | 9.100398e-50 | -8.615850e-47 |
| Msa0143280 | Msa0432970 | -0.814117 | 1.814341e-51 | -8.615850e-47 |
| Msa0163960 | Msa0432970 | -0.801246 | 9.859150e-49 | -8.615850e-47 |
| Msa0180100 | Msa0432970 | -0.841713 | 4.022496e-58 | -8.615850e-47 |
| Msa0183200 | Msa0432970 | -0.803592 | 3.238146e-49 | -8.615850e-47 |
| Msa0184510 | Msa0432970 | -0.859088 | 5.267246e-63 | -8.615850e-47 |
| Msa0207680 | Msa0432970 | 0.839255 | 1.767352e-57 | -8.615850e-47 |
| Msa0209360 | Msa0432970 | 0.816158 | 6.387409e-52 | -8.615850e-47 |
| Msa0226450 | Msa0432970 | -0.802808 | 4.706340e-49 | -8.615850e-47 |
| Msa0236940 | Msa0432970 | 0.816413 | 5.603120e-52 | -8.615850e-47 |
| Msa0378310 | Msa0432970 | -0.818476 | 1.922152e-52 | -8.615850e-47 |
| Msa0382860 | Msa0432970 | 0.991803 | 1.247642e-189 | -8.615850e-47 |
| Msa0414250 | Msa0432970 | -0.809513 | 1.823128e-50 | -8.615850e-47 |
| Msa0432940 | Msa0432970 | 0.998426 | 1.018936e-264 | -8.615850e-47 |
| Msa0432970 | Msa0436840 | 0.802464 | 5.541293e-49 | -8.615850e-47 |
| Msa0432970 | Msa0474570 | 0.810123 | 1.348007e-50 | -8.615850e-47 |
| Msa0432970 | Msa0477030 | 0.985797 | 1.070047e-164 | -8.615850e-47 |
| Msa0432970 | Msa0647320 | 0.827540 | 1.478737e-54 | -8.615850e-47 |
| Msa0432970 | Msa0749150 | -0.820723 | 5.898708e-53 | -8.615850e-47 |
| Msa0432970 | Msa0792880 | -0.812037 | 5.185532e-51 | -8.615850e-47 |
| Msa0432970 | Msa0803530 | -0.820274 | 7.478403e-53 | -8.615850e-47 |
| Msa0432970 | Msa0828900 | -0.818404 | 1.995518e-52 | -8.615850e-47 |
| Msa0432970 | Msa0930210 | 0.800155 | 1.645302e-48 | -8.615850e-47 |
| Msa0432970 | Msa0931550 | -0.823381 | 1.428177e-53 | -8.615850e-47 |
| Msa0432970 | Msa0950470 | -0.821772 | 3.379663e-53 | -8.615850e-47 |
| Msa0432970 | Msa0950570 | -0.825351 | 4.913928e-54 | -8.615850e-47 |
| Msa0432970 | Msa0976490 | 0.800609 | 1.330128e-48 | -8.615850e-47 |
| Msa0432970 | Msa1024570 | 0.820178 | 7.866831e-53 | -8.615850e-47 |
| Msa0432970 | Msa1031180 | 0.829970 | 3.820140e-55 | -8.615850e-47 |
| Msa0432970 | Msa1031530 | -0.807215 | 5.636631e-50 | -8.615850e-47 |
| Msa0432970 | Msa1070360 | 0.860879 | 1.517727e-63 | -8.615850e-47 |
| Msa0432970 | Msa1117510 | -0.831968 | 1.235429e-55 | -8.615850e-47 |
| Msa0432970 | Msa1119430 | 0.834769 | 2.474505e-56 | -8.615850e-47 |
| Msa0432970 | Msa1125450 | -0.810594 | 1.066703e-50 | -8.615850e-47 |
| Msa0432970 | Msa1127910 | 0.805048 | 1.610746e-49 | -8.615850e-47 |
| Msa0432970 | Msa1161210 | -0.810395 | 1.177662e-50 | -8.615850e-47 |
| Msa0432970 | Msa1164570 | -0.810167 | 1.318839e-50 | -8.615850e-47 |
| Msa0432970 | Msa1205270 | -0.800566 | 1.357193e-48 | -8.615850e-47 |
| Msa0432970 | Msa1236860 | -0.810730 | 9.968861e-51 | -8.615850e-47 |
| Msa0432970 | Msa1297220 | -0.802284 | 6.035427e-49 | -8.615850e-47 |
| Msa0432970 | Msa1323260 | -0.813264 | 2.795273e-51 | -8.615850e-47 |
| Msa0432970 | Msa1333210 | 0.845181 | 4.766191e-59 | -8.615850e-47 |
| Msa0432970 | Msa1343450 | -0.815882 | 7.360514e-52 | -8.615850e-47 |
| Msa0432970 | Msa1363070 | -0.803768 | 2.977558e-49 | -8.615850e-47 |
| Msa0432970 | Msa1371300 | 0.990132 | 3.316188e-181 | -8.615850e-47 |
| Msa0432970 | Msa1386250 | -0.808154 | 3.559954e-50 | -8.615850e-47 |
| Msa0432970 | Msa1460530 | -0.832744 | 7.937668e-56 | -8.615850e-47 |
| Msa0275560 | Msa0432970 | 0.833590 | 4.886721e-56 | -8.615850e-47 |
| Msa0295680 | Msa0432970 | 0.840229 | 9.857788e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432970 | MtrunA17_Chr3g0138161 | 94.690 | 678 | 35 | 1 | 1 | 677 | 1 | 678 | 0.0 | 1312 |
| Msa0432970 | MtrunA17_Chr1g0148971 | 76.006 | 646 | 146 | 3 | 3 | 642 | 19 | 661 | 0.0 | 1004 |
| Msa0432970 | MtrunA17_Chr2g0332331 | 68.037 | 657 | 200 | 5 | 4 | 654 | 11 | 663 | 0.0 | 901 |
| Msa0432970 | MtrunA17_Chr2g0332351 | 68.664 | 651 | 194 | 5 | 4 | 648 | 11 | 657 | 0.0 | 900 |
| Msa0432970 | MtrunA17_Chr2g0332471 | 69.147 | 645 | 189 | 5 | 4 | 642 | 11 | 651 | 0.0 | 897 |
| Msa0432970 | MtrunA17_Chr2g0332441 | 70.537 | 577 | 164 | 3 | 39 | 609 | 2 | 578 | 0.0 | 830 |
| Msa0432970 | MtrunA17_Chr2g0332491 | 62.128 | 639 | 159 | 4 | 4 | 642 | 11 | 566 | 0.0 | 773 |
| Msa0432970 | MtrunA17_Chr7g0270341 | 59.480 | 654 | 242 | 5 | 4 | 643 | 7 | 651 | 0.0 | 765 |
| Msa0432970 | MtrunA17_Chr2g0293661 | 57.562 | 648 | 254 | 4 | 4 | 639 | 7 | 645 | 0.0 | 763 |
| Msa0432970 | MtrunA17_Chr3g0117521 | 58.923 | 650 | 245 | 7 | 4 | 639 | 7 | 648 | 0.0 | 749 |
| Msa0432970 | MtrunA17_Chr2g0332391 | 65.805 | 348 | 113 | 3 | 172 | 513 | 1 | 348 | 5.18e-166 | 479 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0432970 | AT4G32510.1 | 68.203 | 651 | 194 | 4 | 4 | 642 | 7 | 656 | 0.0 | 927 |
| Msa0432970 | AT4G32510.2 | 68.203 | 651 | 194 | 4 | 4 | 642 | 7 | 656 | 0.0 | 927 |
| Msa0432970 | AT5G25430.1 | 66.410 | 649 | 212 | 2 | 3 | 646 | 8 | 655 | 0.0 | 917 |
| Msa0432970 | AT1G15460.2 | 66.667 | 648 | 200 | 3 | 5 | 642 | 13 | 654 | 0.0 | 906 |
| Msa0432970 | AT1G15460.1 | 66.667 | 648 | 200 | 3 | 5 | 642 | 13 | 654 | 0.0 | 906 |
| Msa0432970 | AT1G74810.7 | 65.794 | 649 | 206 | 4 | 4 | 642 | 12 | 654 | 0.0 | 881 |
| Msa0432970 | AT1G74810.4 | 65.794 | 649 | 206 | 4 | 4 | 642 | 12 | 654 | 0.0 | 881 |
| Msa0432970 | AT1G74810.1 | 65.794 | 649 | 206 | 4 | 4 | 642 | 12 | 654 | 0.0 | 881 |
| Msa0432970 | AT1G15460.3 | 67.810 | 612 | 187 | 2 | 5 | 606 | 13 | 624 | 0.0 | 872 |
| Msa0432970 | AT1G74810.6 | 65.968 | 620 | 195 | 4 | 33 | 642 | 9 | 622 | 0.0 | 838 |
| Msa0432970 | AT1G74810.3 | 65.968 | 620 | 195 | 4 | 33 | 642 | 9 | 622 | 0.0 | 838 |
| Msa0432970 | AT3G62270.1 | 59.660 | 647 | 241 | 6 | 4 | 639 | 7 | 644 | 0.0 | 784 |
| Msa0432970 | AT2G47160.1 | 60.278 | 647 | 236 | 6 | 4 | 639 | 7 | 643 | 0.0 | 781 |
| Msa0432970 | AT2G47160.2 | 58.036 | 672 | 236 | 7 | 4 | 639 | 7 | 668 | 0.0 | 768 |
| Msa0432970 | AT3G06450.3 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 754 |
| Msa0432970 | AT3G06450.1 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 754 |
| Msa0432970 | AT3G06450.2 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 754 |
| Msa0432970 | AT3G06450.4 | 56.522 | 644 | 263 | 8 | 4 | 639 | 9 | 643 | 0.0 | 754 |
| Msa0432970 | AT1G15460.4 | 64.801 | 554 | 179 | 3 | 99 | 642 | 1 | 548 | 0.0 | 752 |
| Msa0432970 | AT1G74810.5 | 63.718 | 554 | 185 | 4 | 99 | 642 | 1 | 548 | 0.0 | 725 |
| Msa0432970 | AT1G74810.2 | 63.636 | 517 | 172 | 4 | 136 | 642 | 1 | 511 | 0.0 | 671 |
Find 209 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACCCGTGATTTATATATT+TGG | 0.189461 | 3_2:+85293555 | Msa0432970:CDS |
| AATTAAAATATAGGAAATAT+TGG | 0.193606 | 3_2:-85291667 | None:intergenic |
| CGAGGCTTTATTGCAGATTA+TGG | 0.224792 | 3_2:+85293133 | Msa0432970:CDS |
| TACCCGTGATTTATATATTT+GGG | 0.228711 | 3_2:+85293556 | Msa0432970:CDS |
| AGAATTGCAGGGGAGTTATT+TGG | 0.243689 | 3_2:+85292681 | Msa0432970:CDS |
| GGAATTATTCACTCAATTAT+AGG | 0.251240 | 3_2:+85292355 | Msa0432970:CDS |
| TAAAATTAAAATTAAAATAT+AGG | 0.263051 | 3_2:-85291676 | None:intergenic |
| CTGATTGGTTTATCGATAAT+AGG | 0.284857 | 3_2:+85294384 | Msa0432970:CDS |
| ATTATAACAGGTTAAAGAAT+TGG | 0.285654 | 3_2:+85294224 | Msa0432970:intron |
| ATGGCAATTGATAGTCTTCC+TGG | 0.286687 | 3_2:+85294462 | Msa0432970:CDS |
| CAAAGAGTTTGGCAGTTCTT+AGG | 0.288036 | 3_2:+85293881 | Msa0432970:CDS |
| GTCTTCCTGGGAATCAGTTC+TGG | 0.288459 | 3_2:+85294475 | Msa0432970:CDS |
| TTTCTTTCAAGAGGCTATAA+AGG | 0.293379 | 3_2:+85292722 | Msa0432970:CDS |
| AGCTTGAAGATGATCTTCTT+TGG | 0.301502 | 3_2:+85295523 | Msa0432970:exon |
| TGGTTAGGCTTGAATATCTT+TGG | 0.316056 | 3_2:-85294814 | None:intergenic |
| ATTACTTGTAACGCCGGCTT+GGG | 0.319641 | 3_2:-85294524 | None:intergenic |
| ATTCTTTGCTTCCGCGCTTC+CGG | 0.321126 | 3_2:+85292249 | Msa0432970:CDS |
| TTATTGTATGGAACAAATCT+AGG | 0.322748 | 3_2:-85291625 | None:intergenic |
| AATTCATTTGAACTTTGAAA+TGG | 0.326120 | 3_2:+85295607 | Msa0432970:three_prime_UTR |
| GCGCTTCCGGTCATTGCTTT+CGG | 0.332914 | 3_2:+85292262 | Msa0432970:CDS |
| TTACTATGATGCAGAGATAT+TGG | 0.337001 | 3_2:+85295134 | Msa0432970:CDS |
| CTTTCGGAGAACAACTTAGT+AGG | 0.339784 | 3_2:+85292278 | Msa0432970:CDS |
| GAAAGAGAATAATGGCAAAA+AGG | 0.355095 | 3_2:+85295568 | Msa0432970:three_prime_UTR |
| ATGAATGAAAACGCGTTTGA+TGG | 0.362058 | 3_2:-85291843 | None:intergenic |
| CTTGGCCTTCCTCCTTCAAA+TGG | 0.362198 | 3_2:+85293832 | Msa0432970:CDS |
| TACCAAGCTCTTTCTAGCTT+GGG | 0.365109 | 3_2:+85292471 | Msa0432970:CDS |
| CTGTTGTTCCATGCATTCCT+TGG | 0.365305 | 3_2:-85294036 | None:intergenic |
| AGTGGACAAAACAGCCTTCT+AGG | 0.365772 | 3_2:-85293226 | None:intergenic |
| AGTACCAGCTCTGAATTATA+TGG | 0.368865 | 3_2:+85294059 | Msa0432970:CDS |
| GGAACAAGAAAGGATTCAAT+TGG | 0.383575 | 3_2:+85295544 | Msa0432970:three_prime_UTR |
| ACTAGATTTACAAGAATTGC+AGG | 0.384496 | 3_2:+85292669 | Msa0432970:CDS |
| TCCCATGCATACAAAGAGTT+TGG | 0.386041 | 3_2:+85293870 | Msa0432970:CDS |
| GCAAGCTGTGTTCATTGAAA+TGG | 0.395458 | 3_2:+85294088 | Msa0432970:CDS |
| TGGGTCTGCGCAATCTGTTC+CGG | 0.400996 | 3_2:+85292118 | Msa0432970:CDS |
| ATTCAAGCCTAACCATCTTC+AGG | 0.402816 | 3_2:+85294822 | Msa0432970:CDS |
| GTACCAAGCTCTTTCTAGCT+TGG | 0.404814 | 3_2:+85292470 | Msa0432970:CDS |
| CAATCAGGAGGGACTGCAAT+AGG | 0.410300 | 3_2:-85294368 | None:intergenic |
| TAATAATAATGACAGCATAT+TGG | 0.412439 | 3_2:+85292210 | Msa0432970:intron |
| ATTAAAATATAGGAAATATT+GGG | 0.413687 | 3_2:-85291666 | None:intergenic |
| CTATTGCAGTCCCTCCTGAT+TGG | 0.417106 | 3_2:+85294369 | Msa0432970:CDS |
| TTCCAAGTGGTGTTCCTAGA+AGG | 0.420451 | 3_2:+85293212 | Msa0432970:CDS |
| GATCTTCTTTGGAACAAGAA+AGG | 0.422212 | 3_2:+85295534 | Msa0432970:three_prime_UTR |
| TTAAATGCTATAAACAAGAT+TGG | 0.422231 | 3_2:+85292098 | Msa0432970:CDS |
| ATTCATTTGAACTTTGAAAT+GGG | 0.423981 | 3_2:+85295608 | Msa0432970:three_prime_UTR |
| TGTGTTGCAGGGTTTGTGTT+TGG | 0.424941 | 3_2:+85292595 | Msa0432970:intron |
| TGGGTTTCAAATATATTAGT+AGG | 0.427061 | 3_2:+85295627 | Msa0432970:three_prime_UTR |
| AAAGCAAGATCATGGCGATA+TGG | 0.432577 | 3_2:+85292977 | Msa0432970:CDS |
| GATTGACACTTTAAAACAGT+TGG | 0.433116 | 3_2:-85291773 | None:intergenic |
| GCGCAATCTGTTCCGGCGTT+AGG | 0.439948 | 3_2:+85292125 | Msa0432970:CDS |
| TTTGGCAGTTCTTAGGAGGC+AGG | 0.441887 | 3_2:+85293888 | Msa0432970:CDS |
| CATTGAAATATTGAGATCAA+TGG | 0.443791 | 3_2:+85295657 | Msa0432970:three_prime_UTR |
| TGTAATGAAATCTGATACCA+AGG | 0.445347 | 3_2:+85294263 | Msa0432970:CDS |
| TGGATGAGATGACAACCAAC+AGG | 0.447214 | 3_2:+85295154 | Msa0432970:CDS |
| ACACCACTTGGAACGTCGTC+AGG | 0.447750 | 3_2:-85293202 | None:intergenic |
| ACTCTGATATGTGGTCTCCT+TGG | 0.450753 | 3_2:+85293814 | Msa0432970:CDS |
| TTGGCATCTACTGCCATTTG+TGG | 0.452678 | 3_2:+85292334 | Msa0432970:CDS |
| GTGTCTCTCTCATCTTTGAC+TGG | 0.455600 | 3_2:+85291591 | Msa0432970:five_prime_UTR |
| TGGTCATTTCCTTCCTAAGT+TGG | 0.457818 | 3_2:+85295677 | Msa0432970:three_prime_UTR |
| CTTTGTTCATTAACTCGGAC+TGG | 0.459027 | 3_2:-85294336 | None:intergenic |
| GTGAACTTCATGGCCAACTT+AGG | 0.459958 | 3_2:-85295690 | None:intergenic |
| GCAAAGAATATGTAGAAAGT+TGG | 0.461025 | 3_2:-85292235 | None:intergenic |
| AATTACTTGTAACGCCGGCT+TGG | 0.462717 | 3_2:-85294525 | None:intergenic |
| TGAGTGAATAATTCCACAAA+TGG | 0.463157 | 3_2:-85292347 | None:intergenic |
| AGATACACATGCCTCATTTG+TGG | 0.466869 | 3_2:+85294642 | Msa0432970:CDS |
| TCTGAGTATGAGGAAATTAT+CGG | 0.467463 | 3_2:+85294856 | Msa0432970:CDS |
| ACTTGATGCTTCTGAGTATG+AGG | 0.470967 | 3_2:+85294846 | Msa0432970:CDS |
| TAAGTATCTATGTATTTCTC+AGG | 0.471983 | 3_2:-85294309 | None:intergenic |
| TGCCAAACTCTTTGTATGCA+TGG | 0.474151 | 3_2:-85293872 | None:intergenic |
| AGAATTATGAGAAGGAAGAA+TGG | 0.475173 | 3_2:-85294775 | None:intergenic |
| AAGCTCTTTCTAGCTTGGGC+TGG | 0.476446 | 3_2:+85292475 | Msa0432970:CDS |
| TCTTTCTAGCTTGGGCTGGT+TGG | 0.476758 | 3_2:+85292479 | Msa0432970:CDS |
| ATCCATTGGTATACCGCCAT+TGG | 0.477208 | 3_2:-85292901 | None:intergenic |
| ATTCCAGCTTTGATGATAGC+AGG | 0.478040 | 3_2:+85293585 | Msa0432970:CDS |
| ATGTATTTCTCAGGATCAAA+AGG | 0.479705 | 3_2:-85294300 | None:intergenic |
| TAAATGCTATAAACAAGATT+GGG | 0.483293 | 3_2:+85292099 | Msa0432970:CDS |
| ATAAAGAGATGCAGGTTCCC+AGG | 0.487430 | 3_2:-85293251 | None:intergenic |
| CAGAAAATATGCCAACTGTA+AGG | 0.487488 | 3_2:-85294701 | None:intergenic |
| TCTTGAATGATTCCCTCAAA+TGG | 0.488582 | 3_2:-85292061 | None:intergenic |
| CAAGTAGGAAAACATCATAA+TGG | 0.491729 | 3_2:-85293686 | None:intergenic |
| AATCCAGCTATGGTCTTGAA+TGG | 0.492132 | 3_2:-85294673 | None:intergenic |
| AGGTTTATATTATTAGAGAT+AGG | 0.494556 | 3_2:-85295977 | None:intergenic |
| CTCCTAAAATCAACAAAGGT+TGG | 0.498920 | 3_2:-85292381 | None:intergenic |
| TCTTCCTGGGAATCAGTTCT+GGG | 0.500146 | 3_2:+85294476 | Msa0432970:CDS |
| GGAACAAATCTAGGAAAATG+AGG | 0.503426 | 3_2:-85291616 | None:intergenic |
| TAGGCATCTCCGTTATCAAA+AGG | 0.509147 | 3_2:+85294403 | Msa0432970:CDS |
| GTCCAGTGATAAAGAGATGC+AGG | 0.510174 | 3_2:-85293259 | None:intergenic |
| TAACATGGGAGCACCATTTG+AGG | 0.510206 | 3_2:+85292048 | Msa0432970:exon |
| GTTAGGTTGAGGGGAAAAGA+TGG | 0.511735 | 3_2:+85295723 | Msa0432970:three_prime_UTR |
| AACATGGGAGCACCATTTGA+GGG | 0.512969 | 3_2:+85292049 | Msa0432970:exon |
| TGTTCTGTTTCGGGGTCACA+TGG | 0.513903 | 3_2:+85294722 | Msa0432970:CDS |
| GATGCAGGTTCCCAGGGAAG+TGG | 0.514690 | 3_2:-85293244 | None:intergenic |
| TCATTCTTTGTTCATTAACT+CGG | 0.516096 | 3_2:-85294341 | None:intergenic |
| AAACCTGCTATCATCAAAGC+TGG | 0.519396 | 3_2:-85293588 | None:intergenic |
| TTTCGGAGAACAACTTAGTA+GGG | 0.520810 | 3_2:+85292279 | Msa0432970:CDS |
| AAGCATCAAGTTCCTGAAGA+TGG | 0.521659 | 3_2:-85294834 | None:intergenic |
| TAATTTCCTCTCACAGCTGA+AGG | 0.523428 | 3_2:-85292027 | None:intergenic |
| CAATTGGTGAAAGAGAATAA+TGG | 0.525184 | 3_2:+85295560 | Msa0432970:three_prime_UTR |
| GTACCATTCAAGACCATAGC+TGG | 0.525744 | 3_2:+85294670 | Msa0432970:CDS |
| CAGTACGTAGTATGTCACTC+AGG | 0.526268 | 3_2:+85294890 | Msa0432970:CDS |
| TCTACAAACTGCAGGATATG+TGG | 0.526801 | 3_2:+85293529 | Msa0432970:intron |
| AACCTGCATCTCTTTATCAC+TGG | 0.527373 | 3_2:+85293257 | Msa0432970:CDS |
| GTCCACAACACTACCATCAC+TGG | 0.527804 | 3_2:-85293160 | None:intergenic |
| AGGTTCCATTGCACAACCCT+TGG | 0.529505 | 3_2:-85294280 | None:intergenic |
| TCAAGTTCCTGAAGATGGTT+AGG | 0.529736 | 3_2:-85294829 | None:intergenic |
| CTATTATCGATAAACCAATC+AGG | 0.530355 | 3_2:-85294383 | None:intergenic |
| TGCCCCAAATATATAAATCA+CGG | 0.532143 | 3_2:-85293559 | None:intergenic |
| GCCAAACTCTTTGTATGCAT+GGG | 0.535179 | 3_2:-85293871 | None:intergenic |
| AAGTTTCAACTCTCCCCTGT+TGG | 0.535774 | 3_2:-85295169 | None:intergenic |
| ATTTGCAGCTGATCCGAAAG+AGG | 0.538031 | 3_2:+85294000 | Msa0432970:intron |
| CTTTCCCAGAACTGATTCCC+AGG | 0.538850 | 3_2:-85294480 | None:intergenic |
| GTGTATACAGCAAAAGAAAA+CGG | 0.540706 | 3_2:-85291714 | None:intergenic |
| GTACTAGGGCAGATTTGACC+TGG | 0.541341 | 3_2:+85295394 | Msa0432970:intron |
| TGTGGAAGGACTCCATTTGA+AGG | 0.542425 | 3_2:-85293844 | None:intergenic |
| AGCCCAAGCTAGAAAGAGCT+TGG | 0.543809 | 3_2:-85292473 | None:intergenic |
| AATTGTATCATCCTCTGAAG+AGG | 0.544738 | 3_2:+85295469 | Msa0432970:CDS |
| TTCCAGTGATGGTAGTGTTG+TGG | 0.547605 | 3_2:+85293158 | Msa0432970:CDS |
| TAAGTGTACATTATAACAGT+TGG | 0.548681 | 3_2:-85292412 | None:intergenic |
| TTGCAGGGTTTGTGTTTGGA+CGG | 0.549975 | 3_2:+85292599 | Msa0432970:intron |
| TCCTCTTCGTCACCCCAAGC+CGG | 0.550263 | 3_2:+85294511 | Msa0432970:CDS |
| GCCCCAAATATATAAATCAC+GGG | 0.551841 | 3_2:-85293558 | None:intergenic |
| ACCCGTGATTTATATATTTG+GGG | 0.552067 | 3_2:+85293557 | Msa0432970:CDS |
| TTCCAATGGCGGTATACCAA+TGG | 0.553783 | 3_2:+85292899 | Msa0432970:CDS |
| TCATAGCGTGGCTTCTCAGA+TGG | 0.555026 | 3_2:+85293623 | Msa0432970:CDS |
| TAGGAAAACATCATAATGGT+AGG | 0.556385 | 3_2:-85293682 | None:intergenic |
| AGAGTTTGGCAGTTCTTAGG+AGG | 0.556567 | 3_2:+85293884 | Msa0432970:CDS |
| AGCCTTCTAGGAACACCACT+TGG | 0.556893 | 3_2:-85293214 | None:intergenic |
| TAGGCTTGAATATCTTTGGA+AGG | 0.557117 | 3_2:-85294810 | None:intergenic |
| AAAGCAGAAAAGCAAGATCA+TGG | 0.557963 | 3_2:+85292969 | Msa0432970:CDS |
| GACATACTACGTACTGCAGA+TGG | 0.563507 | 3_2:-85294883 | None:intergenic |
| TGGATTTACAGCCTTACAGT+TGG | 0.564075 | 3_2:+85294690 | Msa0432970:CDS |
| CCACGTGATAGTGATAATGA+TGG | 0.565884 | 3_2:+85295099 | Msa0432970:CDS |
| ATGAGAAGGAAGAATGGTAG+CGG | 0.566015 | 3_2:-85294769 | None:intergenic |
| AATTGCAATTCCTCCGACGA+AGG | 0.567377 | 3_2:-85292878 | None:intergenic |
| CTGGGAATCAGTTCTGGGAA+AGG | 0.571040 | 3_2:+85294481 | Msa0432970:CDS |
| CTTGAGCACTGTAGAAACAT+TGG | 0.571302 | 3_2:+85292315 | Msa0432970:CDS |
| AATGACTGCGAGTAATCCAT+TGG | 0.572971 | 3_2:-85292915 | None:intergenic |
| GAACAAATCTAGGAAAATGA+GGG | 0.575461 | 3_2:-85291615 | None:intergenic |
| TGATACCAAGGGTTGTGCAA+TGG | 0.575807 | 3_2:+85294275 | Msa0432970:CDS |
| TGGTACTGTCTCCACAAATG+AGG | 0.576656 | 3_2:-85294653 | None:intergenic |
| CAGGAGGGACTGCAATAGGT+TGG | 0.576763 | 3_2:-85294364 | None:intergenic |
| CTAATATAGTAACAATGAAG+TGG | 0.577191 | 3_2:-85291907 | None:intergenic |
| TTTCCTCCTTCAGCTGTGAG+AGG | 0.577820 | 3_2:+85292021 | Msa0432970:five_prime_UTR |
| AATATTCAGACAGCACCTCC+AGG | 0.578164 | 3_2:-85295412 | None:intergenic |
| AAAGATGGTACGAGAGTGAA+AGG | 0.579697 | 3_2:+85295738 | Msa0432970:three_prime_UTR |
| GGAATCATTCAAGATGTCAA+AGG | 0.583983 | 3_2:+85292070 | Msa0432970:CDS |
| TATCCCCATAAAACCGAGGT+AGG | 0.584080 | 3_2:-85294429 | None:intergenic |
| AGATTATGGTGTTCCAGTGA+TGG | 0.584710 | 3_2:+85293147 | Msa0432970:CDS |
| CGGAGGAATTGCAATTCCAA+TGG | 0.585619 | 3_2:+85292885 | Msa0432970:CDS |
| ACATCATAATGGTAGGCAGA+TGG | 0.586423 | 3_2:-85293675 | None:intergenic |
| GCCGGCTTGGGGTGACGAAG+AGG | 0.586471 | 3_2:-85294512 | None:intergenic |
| GGACTCCATTTGAAGGAGGA+AGG | 0.587102 | 3_2:-85293837 | None:intergenic |
| ATGTAATAATGTGTAAAGAG+AGG | 0.587989 | 3_2:-85291932 | None:intergenic |
| CTAGATTTACAAGAATTGCA+GGG | 0.588173 | 3_2:+85292670 | Msa0432970:CDS |
| AGTCTTTAGACTCTGATATG+TGG | 0.592532 | 3_2:+85293805 | Msa0432970:intron |
| ACTTCATGGCCAACTTAGGA+AGG | 0.593342 | 3_2:-85295686 | None:intergenic |
| TGGCAATTGATAGTCTTCCT+GGG | 0.593727 | 3_2:+85294463 | Msa0432970:CDS |
| GAAAAGCGCCAAGGAATGCA+TGG | 0.594390 | 3_2:+85294028 | Msa0432970:CDS |
| TTTGCAGCTGATCCGAAAGA+GGG | 0.595342 | 3_2:+85294001 | Msa0432970:intron |
| TAAGGCTGTAAATCCAGCTA+TGG | 0.595564 | 3_2:-85294683 | None:intergenic |
| TAGTGATAATGATGGAAGCT+CGG | 0.596596 | 3_2:+85295107 | Msa0432970:CDS |
| TGTTCTCCGAAAGCAATGAC+CGG | 0.597888 | 3_2:-85292268 | None:intergenic |
| TACTCAATTACTTGTAACGC+CGG | 0.600590 | 3_2:-85294530 | None:intergenic |
| TTTCCTCTCACAGCTGAAGG+AGG | 0.600917 | 3_2:-85292024 | None:intergenic |
| GCTTGAATATCTTTGGAAGG+AGG | 0.601711 | 3_2:-85294807 | None:intergenic |
| AAGAGCTTGGTACCCAGTTG+AGG | 0.604187 | 3_2:-85292460 | None:intergenic |
| AGGCGAGTTCAGCACTCCCA+AGG | 0.604329 | 3_2:+85292847 | Msa0432970:CDS |
| TTTGAACCACAGGGACTGGT+AGG | 0.604416 | 3_2:+85292827 | Msa0432970:intron |
| GGAAACAATATTCCACCTAT+CGG | 0.607030 | 3_2:-85294748 | None:intergenic |
| ATTATTCACTCAATTATAGG+TGG | 0.609337 | 3_2:+85292358 | Msa0432970:CDS |
| CAAGGTTGAAAATCCTTCGT+CGG | 0.611167 | 3_2:+85292865 | Msa0432970:CDS |
| TGAATTAAATTACCTAACGC+CGG | 0.611783 | 3_2:-85292137 | None:intergenic |
| GGATGAGATGACAACCAACA+GGG | 0.624263 | 3_2:+85295155 | Msa0432970:CDS |
| TAAAGAGATGCAGGTTCCCA+GGG | 0.625123 | 3_2:-85293250 | None:intergenic |
| GTTCTCTGAGAATTATGAGA+AGG | 0.627074 | 3_2:-85294783 | None:intergenic |
| TTATCACTGGACAGTAGTGA+AGG | 0.627297 | 3_2:+85293270 | Msa0432970:CDS |
| GCTGTGAGAGGAAATTAACA+TGG | 0.632114 | 3_2:+85292033 | Msa0432970:exon |
| CAACTTAGTAGGGATACAGA+TGG | 0.633505 | 3_2:+85292289 | Msa0432970:CDS |
| TAGATTTACAAGAATTGCAG+GGG | 0.635506 | 3_2:+85292671 | Msa0432970:CDS |
| GTGAGAGCAGTCCTCTTCAG+AGG | 0.639145 | 3_2:-85295480 | None:intergenic |
| GGTTGAAAATCCTTCGTCGG+AGG | 0.639194 | 3_2:+85292868 | Msa0432970:CDS |
| GGGGTCACATGGATACCGAT+AGG | 0.640094 | 3_2:+85294733 | Msa0432970:CDS |
| TTTGTATGCATGGGAGACTG+TGG | 0.640494 | 3_2:-85293862 | None:intergenic |
| TTCAATTCAGGGAGGCTACG+AGG | 0.640834 | 3_2:+85293115 | Msa0432970:intron |
| TATCAAAAGGATACCTACCT+CGG | 0.648218 | 3_2:+85294416 | Msa0432970:CDS |
| TTATCGATAAACCAATCAGG+AGG | 0.649930 | 3_2:-85294380 | None:intergenic |
| TTACTTGTAACGCCGGCTTG+GGG | 0.651277 | 3_2:-85294523 | None:intergenic |
| CAAACTGCAGGATATGTGGA+AGG | 0.653071 | 3_2:+85293533 | Msa0432970:intron |
| GCAACTCCTAAAATCAACAA+AGG | 0.653603 | 3_2:-85292385 | None:intergenic |
| GAAAGCAATGACCGGAAGCG+CGG | 0.656263 | 3_2:-85292260 | None:intergenic |
| CATTTGAAGGAGGAAGGCCA+AGG | 0.657670 | 3_2:-85293831 | None:intergenic |
| GTCACATGGATACCGATAGG+TGG | 0.659868 | 3_2:+85294736 | Msa0432970:CDS |
| AACAGACCATTATTCCAAGT+AGG | 0.662683 | 3_2:-85293701 | None:intergenic |
| TATCGATAAACCAATCAGGA+GGG | 0.666981 | 3_2:-85294379 | None:intergenic |
| ATGCCTGACGACGTTCCAAG+TGG | 0.671559 | 3_2:+85293199 | Msa0432970:CDS |
| AGGAATTGCAATTCCAATGG+CGG | 0.673504 | 3_2:+85292888 | Msa0432970:CDS |
| AGTACGTAGTATGTCACTCA+GGG | 0.676575 | 3_2:+85294891 | Msa0432970:CDS |
| GGAAGGACTCCATTTGAAGG+AGG | 0.676893 | 3_2:-85293841 | None:intergenic |
| TATGCATGGGAGACTGTGGA+AGG | 0.677272 | 3_2:-85293858 | None:intergenic |
| GTAATGAAATCTGATACCAA+GGG | 0.682765 | 3_2:+85294264 | Msa0432970:CDS |
| CTGTGAGAGGAAATTAACAT+GGG | 0.686817 | 3_2:+85292034 | Msa0432970:exon |
| CTAGGGCAGATTTGACCTGG+AGG | 0.687491 | 3_2:+85295397 | Msa0432970:intron |
| AAAATATCCCCATAAAACCG+AGG | 0.688473 | 3_2:-85294433 | None:intergenic |
| GAGGGTTGTGAAAAGCGCCA+AGG | 0.688617 | 3_2:+85294019 | Msa0432970:CDS |
| CCTAACAATACATACAGTAG+GGG | 0.689459 | 3_2:-85294117 | None:intergenic |
| GGTACGAGAGTGAAAGGACA+AGG | 0.690185 | 3_2:+85295744 | Msa0432970:three_prime_UTR |
| CCATCATTATCACTATCACG+TGG | 0.692316 | 3_2:-85295099 | None:intergenic |
| AGTGACGTTTGTGAATACTC+AGG | 0.702970 | 3_2:-85295933 | None:intergenic |
| CGTTTGTGAATACTCAGGTG+TGG | 0.711020 | 3_2:-85295928 | None:intergenic |
| GATGAGATGACAACCAACAG+GGG | 0.715278 | 3_2:+85295156 | Msa0432970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATTAAAATTAAAATAT+AGG | - | chr3_2:85291679-85291698 | None:intergenic | 0.0% |
| !! | ATTAAAATATAGGAAATATT+GGG | - | chr3_2:85291669-85291688 | None:intergenic | 10.0% |
| !! | AATTAAAATATAGGAAATAT+TGG | - | chr3_2:85291670-85291689 | None:intergenic | 10.0% |
| !!! | TAAATGCTTAAATATATTTT+TGG | - | chr3_2:85295004-85295023 | None:intergenic | 10.0% |
| !!! | AATAATTGTGTTTTATTGTA+TGG | - | chr3_2:85291640-85291659 | None:intergenic | 15.0% |
| !! | ATTCTTTAAATTTCTGTTTA+AGG | + | chr3_2:85292521-85292540 | Msa0432970:intron | 15.0% |
| !! | TTCTTTAAATTTCTGTTTAA+GGG | + | chr3_2:85292522-85292541 | Msa0432970:intron | 15.0% |
| !! | AAATACATTGTGTATTTAAT+TGG | + | chr3_2:85292783-85292802 | Msa0432970:intron | 15.0% |
| !!! | TCTGAATATTACAATTTTTT+AGG | + | chr3_2:85295425-85295444 | Msa0432970:CDS | 15.0% |
| !! | AAAAAACTTTATTGGTATTA+TGG | - | chr3_2:85295868-85295887 | None:intergenic | 15.0% |
| !! | TTAAATGCTATAAACAAGAT+TGG | + | chr3_2:85292098-85292117 | Msa0432970:CDS | 20.0% |
| !! | TAAATGCTATAAACAAGATT+GGG | + | chr3_2:85292099-85292118 | Msa0432970:CDS | 20.0% |
| !! | TAATAATAATGACAGCATAT+TGG | + | chr3_2:85292210-85292229 | Msa0432970:intron | 20.0% |
| !!! | TTCTTATTTTTGTTAGAAAG+AGG | - | chr3_2:85292764-85292783 | None:intergenic | 20.0% |
| !! | CCAAAAAAAAAAATTGCTTA+AGG | - | chr3_2:85293042-85293061 | None:intergenic | 20.0% |
| !!! | CCTTAAGCAATTTTTTTTTT+TGG | + | chr3_2:85293039-85293058 | Msa0432970:intron | 20.0% |
| !!! | TGTATAAAAAGAAAGCATTT+TGG | - | chr3_2:85293333-85293352 | None:intergenic | 20.0% |
| !! | ATAACATAAATCCAAATTCT+AGG | - | chr3_2:85293740-85293759 | None:intergenic | 20.0% |
| !!! | GTTGGTTTTTAAATTATAAC+AGG | + | chr3_2:85294212-85294231 | Msa0432970:intron | 20.0% |
| !! | ATTATAACAGGTTAAAGAAT+TGG | + | chr3_2:85294224-85294243 | Msa0432970:intron | 20.0% |
| !! | CTACATTGAAAAAAAAGTTT+AGG | - | chr3_2:85294564-85294583 | None:intergenic | 20.0% |
| !! | ATGAATCTTAAAACTTAAGA+GGG | - | chr3_2:85295330-85295349 | None:intergenic | 20.0% |
| !! | AATGAATCTTAAAACTTAAG+AGG | - | chr3_2:85295331-85295350 | None:intergenic | 20.0% |
| !!! | AATTCATTTGAACTTTGAAA+TGG | + | chr3_2:85295607-85295626 | Msa0432970:three_prime_UTR | 20.0% |
| !!! | ATTCATTTGAACTTTGAAAT+GGG | + | chr3_2:85295608-85295627 | Msa0432970:three_prime_UTR | 20.0% |
| !!! | GTTAAGAATTTTTTTTCTGT+TGG | + | chr3_2:85295835-85295854 | Msa0432970:three_prime_UTR | 20.0% |
| ! | TTATTGTATGGAACAAATCT+AGG | - | chr3_2:85291628-85291647 | None:intergenic | 25.0% |
| ! | CTAATATAGTAACAATGAAG+TGG | - | chr3_2:85291910-85291929 | None:intergenic | 25.0% |
| ! | ATGTAATAATGTGTAAAGAG+AGG | - | chr3_2:85291935-85291954 | None:intergenic | 25.0% |
| ! | GGAATTATTCACTCAATTAT+AGG | + | chr3_2:85292355-85292374 | Msa0432970:CDS | 25.0% |
| ! | ATTATTCACTCAATTATAGG+TGG | + | chr3_2:85292358-85292377 | Msa0432970:CDS | 25.0% |
| ! | TAAGTGTACATTATAACAGT+TGG | - | chr3_2:85292415-85292434 | None:intergenic | 25.0% |
| ! | AATGCAAGAATAAAGATCAT+TGG | - | chr3_2:85293096-85293115 | None:intergenic | 25.0% |
| ! | TTATTCTTGCATTTCAATTC+AGG | + | chr3_2:85293103-85293122 | Msa0432970:intron | 25.0% |
| ! | TATTCTTGCATTTCAATTCA+GGG | + | chr3_2:85293104-85293123 | Msa0432970:intron | 25.0% |
| ! | ACACCTTGAATATTAAGTAT+TGG | - | chr3_2:85293410-85293429 | None:intergenic | 25.0% |
| !!! | AGTCGTGATCATTTTAATTT+AGG | + | chr3_2:85293474-85293493 | Msa0432970:intron | 25.0% |
| ! | GTTAGACTTATATGGATATT+AGG | - | chr3_2:85293505-85293524 | None:intergenic | 25.0% |
| ! | TACCCGTGATTTATATATTT+GGG | + | chr3_2:85293556-85293575 | Msa0432970:CDS | 25.0% |
| !!! | TTTGTTTTCTTCCTAGAATT+TGG | + | chr3_2:85293726-85293745 | Msa0432970:intron | 25.0% |
| ! | GATTGACATAATTATCTCTA+TGG | + | chr3_2:85293780-85293799 | Msa0432970:intron | 25.0% |
| ! | TAAGTATCTATGTATTTCTC+AGG | - | chr3_2:85294312-85294331 | None:intergenic | 25.0% |
| ! | TCATTCTTTGTTCATTAACT+CGG | - | chr3_2:85294344-85294363 | None:intergenic | 25.0% |
| !!! | AATTTTTTAGGATGCAGAAA+AGG | + | chr3_2:85295437-85295456 | Msa0432970:CDS | 25.0% |
| ! | TGGGTTTCAAATATATTAGT+AGG | + | chr3_2:85295627-85295646 | Msa0432970:three_prime_UTR | 25.0% |
| ! | CATTGAAATATTGAGATCAA+TGG | + | chr3_2:85295657-85295676 | Msa0432970:three_prime_UTR | 25.0% |
| ! | GACAAGGAAAAAAAAAAAGA+CGG | + | chr3_2:85295760-85295779 | Msa0432970:three_prime_UTR | 25.0% |
| ! | ACAAGGAAAAAAAAAAAGAC+GGG | + | chr3_2:85295761-85295780 | Msa0432970:three_prime_UTR | 25.0% |
| !!! | TACCAATAAAGTTTTTTGAG+AGG | + | chr3_2:85295871-85295890 | Msa0432970:three_prime_UTR | 25.0% |
| ! | ATCCTCTCAAAAAACTTTAT+TGG | - | chr3_2:85295876-85295895 | None:intergenic | 25.0% |
| GAACAAATCTAGGAAAATGA+GGG | - | chr3_2:85291618-85291637 | None:intergenic | 30.0% | |
| GTGTATACAGCAAAAGAAAA+CGG | - | chr3_2:85291717-85291736 | None:intergenic | 30.0% | |
| !! | GATTGACACTTTAAAACAGT+TGG | - | chr3_2:85291776-85291795 | None:intergenic | 30.0% |
| ATGGAGAATTGACAGAAAAA+AGG | - | chr3_2:85291827-85291846 | None:intergenic | 30.0% | |
| TGAATTAAATTACCTAACGC+CGG | - | chr3_2:85292140-85292159 | None:intergenic | 30.0% | |
| GCAAAGAATATGTAGAAAGT+TGG | - | chr3_2:85292238-85292257 | None:intergenic | 30.0% | |
| TGAGTGAATAATTCCACAAA+TGG | - | chr3_2:85292350-85292369 | None:intergenic | 30.0% | |
| ! | ACGAACATTTTAGATCGATA+CGG | - | chr3_2:85292572-85292591 | None:intergenic | 30.0% |
| ACTAGATTTACAAGAATTGC+AGG | + | chr3_2:85292669-85292688 | Msa0432970:CDS | 30.0% | |
| CTAGATTTACAAGAATTGCA+GGG | + | chr3_2:85292670-85292689 | Msa0432970:CDS | 30.0% | |
| TAGATTTACAAGAATTGCAG+GGG | + | chr3_2:85292671-85292690 | Msa0432970:CDS | 30.0% | |
| TTTCTTTCAAGAGGCTATAA+AGG | + | chr3_2:85292722-85292741 | Msa0432970:CDS | 30.0% | |
| ACAAAAATTGTTTGAACCAC+AGG | + | chr3_2:85292817-85292836 | Msa0432970:intron | 30.0% | |
| CAAAAATTGTTTGAACCACA+GGG | + | chr3_2:85292818-85292837 | Msa0432970:intron | 30.0% | |
| !! | CTAATGTGGTATTGGATTTT+TGG | - | chr3_2:85293018-85293037 | None:intergenic | 30.0% |
| AAATTGCTTAAGGTCTAATG+TGG | - | chr3_2:85293032-85293051 | None:intergenic | 30.0% | |
| TAAAGATCATTGGAGTGATA+AGG | - | chr3_2:85293086-85293105 | None:intergenic | 30.0% | |
| GCACCAATACTTAATATTCA+AGG | + | chr3_2:85293404-85293423 | Msa0432970:intron | 30.0% | |
| TAGAAGCTGTTAGACTTATA+TGG | - | chr3_2:85293513-85293532 | None:intergenic | 30.0% | |
| GTACCCGTGATTTATATATT+TGG | + | chr3_2:85293555-85293574 | Msa0432970:CDS | 30.0% | |
| ACCCGTGATTTATATATTTG+GGG | + | chr3_2:85293557-85293576 | Msa0432970:CDS | 30.0% | |
| TGCCCCAAATATATAAATCA+CGG | - | chr3_2:85293562-85293581 | None:intergenic | 30.0% | |
| TAGGAAAACATCATAATGGT+AGG | - | chr3_2:85293685-85293704 | None:intergenic | 30.0% | |
| CAAGTAGGAAAACATCATAA+TGG | - | chr3_2:85293689-85293708 | None:intergenic | 30.0% | |
| ! | CATTATGATGTTTTCCTACT+TGG | + | chr3_2:85293687-85293706 | Msa0432970:CDS | 30.0% |
| ! | TGTTTTCCTACTTGGAATAA+TGG | + | chr3_2:85293695-85293714 | Msa0432970:CDS | 30.0% |
| ! | CATCGATATATTTTGCATCA+AGG | + | chr3_2:85293915-85293934 | Msa0432970:intron | 30.0% |
| TTGAGAAGAAATTAAGAACC+AGG | - | chr3_2:85293943-85293962 | None:intergenic | 30.0% | |
| ! | TTTTCCATATAATTCAGAGC+TGG | - | chr3_2:85294066-85294085 | None:intergenic | 30.0% |
| ACCTAACAATACATACAGTA+GGG | - | chr3_2:85294121-85294140 | None:intergenic | 30.0% | |
| AACCTAACAATACATACAGT+AGG | - | chr3_2:85294122-85294141 | None:intergenic | 30.0% | |
| GATACTAATACACATAGTGT+TGG | + | chr3_2:85294194-85294213 | Msa0432970:intron | 30.0% | |
| TGTAATGAAATCTGATACCA+AGG | + | chr3_2:85294263-85294282 | Msa0432970:CDS | 30.0% | |
| GTAATGAAATCTGATACCAA+GGG | + | chr3_2:85294264-85294283 | Msa0432970:CDS | 30.0% | |
| ATGTATTTCTCAGGATCAAA+AGG | - | chr3_2:85294303-85294322 | None:intergenic | 30.0% | |
| CTATTATCGATAAACCAATC+AGG | - | chr3_2:85294386-85294405 | None:intergenic | 30.0% | |
| !! | CTGATTGGTTTATCGATAAT+AGG | + | chr3_2:85294384-85294403 | Msa0432970:CDS | 30.0% |
| GAAAAAAAAGTTTAGGCACA+AGG | - | chr3_2:85294557-85294576 | None:intergenic | 30.0% | |
| ! | TGTCATTGTCTTGTATGTTT+TGG | + | chr3_2:85294606-85294625 | Msa0432970:intron | 30.0% |
| ! | GTCATTGTCTTGTATGTTTT+GGG | + | chr3_2:85294607-85294626 | Msa0432970:intron | 30.0% |
| ! | GCATATTTTCTGTTCTGTTT+CGG | + | chr3_2:85294712-85294731 | Msa0432970:CDS | 30.0% |
| ! | CATATTTTCTGTTCTGTTTC+GGG | + | chr3_2:85294713-85294732 | Msa0432970:CDS | 30.0% |
| ! | ATATTTTCTGTTCTGTTTCG+GGG | + | chr3_2:85294714-85294733 | Msa0432970:CDS | 30.0% |
| AGAATTATGAGAAGGAAGAA+TGG | - | chr3_2:85294778-85294797 | None:intergenic | 30.0% | |
| TCTGAGTATGAGGAAATTAT+CGG | + | chr3_2:85294856-85294875 | Msa0432970:CDS | 30.0% | |
| TCCAACTTAGGATTTGAATT+TGG | + | chr3_2:85295059-85295078 | Msa0432970:intron | 30.0% | |
| ACCAAATTCAAATCCTAAGT+TGG | - | chr3_2:85295063-85295082 | None:intergenic | 30.0% | |
| TTACTATGATGCAGAGATAT+TGG | + | chr3_2:85295134-85295153 | Msa0432970:CDS | 30.0% | |
| ! | TTATGCTTGTGTTTTGTACT+AGG | + | chr3_2:85295379-85295398 | Msa0432970:intron | 30.0% |
| ! | TATGCTTGTGTTTTGTACTA+GGG | + | chr3_2:85295380-85295399 | Msa0432970:intron | 30.0% |
| CAATTGGTGAAAGAGAATAA+TGG | + | chr3_2:85295560-85295579 | Msa0432970:three_prime_UTR | 30.0% | |
| GAAAGAGAATAATGGCAAAA+AGG | + | chr3_2:85295568-85295587 | Msa0432970:three_prime_UTR | 30.0% | |
| !!! | TCCTTTTTTTGTGAACTTCA+TGG | - | chr3_2:85295703-85295722 | None:intergenic | 30.0% |
| AGTTCACAAAAAAAGGAGTT+AGG | + | chr3_2:85295706-85295725 | Msa0432970:three_prime_UTR | 30.0% | |
| !! | AAAAAAAGGAGTTAGGTTGA+GGG | + | chr3_2:85295713-85295732 | Msa0432970:three_prime_UTR | 30.0% |
| CAAGGAAAAAAAAAAAGACG+GGG | + | chr3_2:85295762-85295781 | Msa0432970:three_prime_UTR | 30.0% | |
| AAGGAAAAAAAAAAAGACGG+GGG | + | chr3_2:85295763-85295782 | Msa0432970:three_prime_UTR | 30.0% | |
| GGAACAAATCTAGGAAAATG+AGG | - | chr3_2:85291619-85291638 | None:intergenic | 35.0% | |
| ATGAATGAAAACGCGTTTGA+TGG | - | chr3_2:85291846-85291865 | None:intergenic | 35.0% | |
| CTGTGAGAGGAAATTAACAT+GGG | + | chr3_2:85292034-85292053 | Msa0432970:exon | 35.0% | |
| TCTTGAATGATTCCCTCAAA+TGG | - | chr3_2:85292064-85292083 | None:intergenic | 35.0% | |
| GGAATCATTCAAGATGTCAA+AGG | + | chr3_2:85292070-85292089 | Msa0432970:CDS | 35.0% | |
| TTTCGGAGAACAACTTAGTA+GGG | + | chr3_2:85292279-85292298 | Msa0432970:CDS | 35.0% | |
| CTCCTAAAATCAACAAAGGT+TGG | - | chr3_2:85292384-85292403 | None:intergenic | 35.0% | |
| GCAACTCCTAAAATCAACAA+AGG | - | chr3_2:85292388-85292407 | None:intergenic | 35.0% | |
| TGCAAAAATACACCTCAACT+GGG | + | chr3_2:85292448-85292467 | Msa0432970:CDS | 35.0% | |
| AATGTTCGTATTTGTGTTGC+AGG | + | chr3_2:85292583-85292602 | Msa0432970:intron | 35.0% | |
| ATGTTCGTATTTGTGTTGCA+GGG | + | chr3_2:85292584-85292603 | Msa0432970:intron | 35.0% | |
| ! | CACTGTTCTTTTCTTTCAAG+AGG | + | chr3_2:85292713-85292732 | Msa0432970:CDS | 35.0% |
| !! | TCGCAGTCATTTTCTCTTTT+GGG | + | chr3_2:85292927-85292946 | Msa0432970:CDS | 35.0% |
| AAAGCAGAAAAGCAAGATCA+TGG | + | chr3_2:85292969-85292988 | Msa0432970:CDS | 35.0% | |
| CTTAAGGTCTAATGTGGTAT+TGG | - | chr3_2:85293026-85293045 | None:intergenic | 35.0% | |
| CTCTACAGACATACATTACA+TGG | - | chr3_2:85293385-85293404 | None:intergenic | 35.0% | |
| GCCCCAAATATATAAATCAC+GGG | - | chr3_2:85293561-85293580 | None:intergenic | 35.0% | |
| !!! | ATACTTTTTCGATCATAGCG+TGG | + | chr3_2:85293611-85293630 | Msa0432970:CDS | 35.0% |
| AACAGACCATTATTCCAAGT+AGG | - | chr3_2:85293704-85293723 | None:intergenic | 35.0% | |
| AGTCTTTAGACTCTGATATG+TGG | + | chr3_2:85293805-85293824 | Msa0432970:intron | 35.0% | |
| !! | AGTACCAGCTCTGAATTATA+TGG | + | chr3_2:85294059-85294078 | Msa0432970:CDS | 35.0% |
| CCTAACAATACATACAGTAG+GGG | - | chr3_2:85294120-85294139 | None:intergenic | 35.0% | |
| TATCGATAAACCAATCAGGA+GGG | - | chr3_2:85294382-85294401 | None:intergenic | 35.0% | |
| TTATCGATAAACCAATCAGG+AGG | - | chr3_2:85294383-85294402 | None:intergenic | 35.0% | |
| ! | GGTAGGTATCCTTTTGATAA+CGG | - | chr3_2:85294415-85294434 | None:intergenic | 35.0% |
| TATCAAAAGGATACCTACCT+CGG | + | chr3_2:85294416-85294435 | Msa0432970:CDS | 35.0% | |
| AAAATATCCCCATAAAACCG+AGG | - | chr3_2:85294436-85294455 | None:intergenic | 35.0% | |
| ! | ATGGGGATATTTTGCTTACA+TGG | + | chr3_2:85294443-85294462 | Msa0432970:CDS | 35.0% |
| TACTCAATTACTTGTAACGC+CGG | - | chr3_2:85294533-85294552 | None:intergenic | 35.0% | |
| CAGAAAATATGCCAACTGTA+AGG | - | chr3_2:85294704-85294723 | None:intergenic | 35.0% | |
| GGAAACAATATTCCACCTAT+CGG | - | chr3_2:85294751-85294770 | None:intergenic | 35.0% | |
| ! | GTTCTCTGAGAATTATGAGA+AGG | - | chr3_2:85294786-85294805 | None:intergenic | 35.0% |
| TAGGCTTGAATATCTTTGGA+AGG | - | chr3_2:85294813-85294832 | None:intergenic | 35.0% | |
| TGGTTAGGCTTGAATATCTT+TGG | - | chr3_2:85294817-85294836 | None:intergenic | 35.0% | |
| ! | AAATCCTAAGTTGGAAAGCT+TGG | - | chr3_2:85295054-85295073 | None:intergenic | 35.0% |
| GGATTTGAATTTGGTTGATC+AGG | + | chr3_2:85295068-85295087 | Msa0432970:intron | 35.0% | |
| TGAATTTGGTTGATCAGGAT+AGG | + | chr3_2:85295073-85295092 | Msa0432970:intron | 35.0% | |
| GAATTTGGTTGATCAGGATA+GGG | + | chr3_2:85295074-85295093 | Msa0432970:intron | 35.0% | |
| ! | TAGTGATAATGATGGAAGCT+CGG | + | chr3_2:85295107-85295126 | Msa0432970:CDS | 35.0% |
| ! | AATTGTATCATCCTCTGAAG+AGG | + | chr3_2:85295469-85295488 | Msa0432970:CDS | 35.0% |
| AGCTTGAAGATGATCTTCTT+TGG | + | chr3_2:85295523-85295542 | Msa0432970:exon | 35.0% | |
| !! | GATCTTCTTTGGAACAAGAA+AGG | + | chr3_2:85295534-85295553 | Msa0432970:three_prime_UTR | 35.0% |
| GGAACAAGAAAGGATTCAAT+TGG | + | chr3_2:85295544-85295563 | Msa0432970:three_prime_UTR | 35.0% | |
| GGCAAAAAGGAACAAAGATA+TGG | + | chr3_2:85295581-85295600 | Msa0432970:three_prime_UTR | 35.0% | |
| GCCATGAAGTTCACAAAAAA+AGG | + | chr3_2:85295699-85295718 | Msa0432970:three_prime_UTR | 35.0% | |
| ! | CAAAAAAAGGAGTTAGGTTG+AGG | + | chr3_2:85295712-85295731 | Msa0432970:three_prime_UTR | 35.0% |
| !! | AAAAAAGGAGTTAGGTTGAG+GGG | + | chr3_2:85295714-85295733 | Msa0432970:three_prime_UTR | 35.0% |
| TAATTTCCTCTCACAGCTGA+AGG | - | chr3_2:85292030-85292049 | None:intergenic | 40.0% | |
| GCTGTGAGAGGAAATTAACA+TGG | + | chr3_2:85292033-85292052 | Msa0432970:exon | 40.0% | |
| CTTTCGGAGAACAACTTAGT+AGG | + | chr3_2:85292278-85292297 | Msa0432970:CDS | 40.0% | |
| CAACTTAGTAGGGATACAGA+TGG | + | chr3_2:85292289-85292308 | Msa0432970:CDS | 40.0% | |
| ! | CTTGAGCACTGTAGAAACAT+TGG | + | chr3_2:85292315-85292334 | Msa0432970:CDS | 40.0% |
| !!! | GGCCAACCTTTGTTGATTTT+AGG | + | chr3_2:85292379-85292398 | Msa0432970:CDS | 40.0% |
| CTGCAAAAATACACCTCAAC+TGG | + | chr3_2:85292447-85292466 | Msa0432970:CDS | 40.0% | |
| !! | TACCAAGCTCTTTCTAGCTT+GGG | + | chr3_2:85292471-85292490 | Msa0432970:CDS | 40.0% |
| AGAATTGCAGGGGAGTTATT+TGG | + | chr3_2:85292681-85292700 | Msa0432970:CDS | 40.0% | |
| ! | GACGAAGGATTTTCAACCTT+GGG | - | chr3_2:85292866-85292885 | None:intergenic | 40.0% |
| CAAGGTTGAAAATCCTTCGT+CGG | + | chr3_2:85292865-85292884 | Msa0432970:CDS | 40.0% | |
| AGGAATTGCAATTCCAATGG+CGG | + | chr3_2:85292888-85292907 | Msa0432970:CDS | 40.0% | |
| AATGACTGCGAGTAATCCAT+TGG | - | chr3_2:85292918-85292937 | None:intergenic | 40.0% | |
| !! | CTCGCAGTCATTTTCTCTTT+TGG | + | chr3_2:85292926-85292945 | Msa0432970:CDS | 40.0% |
| AAAGCAAGATCATGGCGATA+TGG | + | chr3_2:85292977-85292996 | Msa0432970:CDS | 40.0% | |
| TCTTGCATTTCAATTCAGGG+AGG | + | chr3_2:85293107-85293126 | Msa0432970:intron | 40.0% | |
| !! | CGAGGCTTTATTGCAGATTA+TGG | + | chr3_2:85293133-85293152 | Msa0432970:CDS | 40.0% |
| AGATTATGGTGTTCCAGTGA+TGG | + | chr3_2:85293147-85293166 | Msa0432970:CDS | 40.0% | |
| AACCTGCATCTCTTTATCAC+TGG | + | chr3_2:85293257-85293276 | Msa0432970:CDS | 40.0% | |
| TTATCACTGGACAGTAGTGA+AGG | + | chr3_2:85293270-85293289 | Msa0432970:CDS | 40.0% | |
| CACTAACACGTGTCATACAT+CGG | - | chr3_2:85293435-85293454 | None:intergenic | 40.0% | |
| TAACAGCTTCTACAAACTGC+AGG | + | chr3_2:85293521-85293540 | Msa0432970:intron | 40.0% | |
| TCTACAAACTGCAGGATATG+TGG | + | chr3_2:85293529-85293548 | Msa0432970:intron | 40.0% | |
| ! | ATTCCAGCTTTGATGATAGC+AGG | + | chr3_2:85293585-85293604 | Msa0432970:CDS | 40.0% |
| AAACCTGCTATCATCAAAGC+TGG | - | chr3_2:85293591-85293610 | None:intergenic | 40.0% | |
| ACATCATAATGGTAGGCAGA+TGG | - | chr3_2:85293678-85293697 | None:intergenic | 40.0% | |
| TCCCATGCATACAAAGAGTT+TGG | + | chr3_2:85293870-85293889 | Msa0432970:CDS | 40.0% | |
| GCCAAACTCTTTGTATGCAT+GGG | - | chr3_2:85293874-85293893 | None:intergenic | 40.0% | |
| TGCCAAACTCTTTGTATGCA+TGG | - | chr3_2:85293875-85293894 | None:intergenic | 40.0% | |
| CAAAGAGTTTGGCAGTTCTT+AGG | + | chr3_2:85293881-85293900 | Msa0432970:CDS | 40.0% | |
| ! | ATATTTTGCATCAAGGCTCC+TGG | + | chr3_2:85293922-85293941 | Msa0432970:intron | 40.0% |
| CAAATCAATGGTGCAACACA+AGG | - | chr3_2:85293985-85294004 | None:intergenic | 40.0% | |
| GCAAGCTGTGTTCATTGAAA+TGG | + | chr3_2:85294088-85294107 | Msa0432970:CDS | 40.0% | |
| CCCCTACTGTATGTATTGTT+AGG | + | chr3_2:85294117-85294136 | Msa0432970:intron | 40.0% | |
| CTTTGTTCATTAACTCGGAC+TGG | - | chr3_2:85294339-85294358 | None:intergenic | 40.0% | |
| TAGGCATCTCCGTTATCAAA+AGG | + | chr3_2:85294403-85294422 | Msa0432970:CDS | 40.0% | |
| !! | GATACCTACCTCGGTTTTAT+GGG | + | chr3_2:85294425-85294444 | Msa0432970:CDS | 40.0% |
| !! | ATACCTACCTCGGTTTTATG+GGG | + | chr3_2:85294426-85294445 | Msa0432970:CDS | 40.0% |
| ! | ATGGCAATTGATAGTCTTCC+TGG | + | chr3_2:85294462-85294481 | Msa0432970:CDS | 40.0% |
| ! | TGGCAATTGATAGTCTTCCT+GGG | + | chr3_2:85294463-85294482 | Msa0432970:CDS | 40.0% |
| AGATACACATGCCTCATTTG+TGG | + | chr3_2:85294642-85294661 | Msa0432970:CDS | 40.0% | |
| ! | AATCCAGCTATGGTCTTGAA+TGG | - | chr3_2:85294676-85294695 | None:intergenic | 40.0% |
| TAAGGCTGTAAATCCAGCTA+TGG | - | chr3_2:85294686-85294705 | None:intergenic | 40.0% | |
| TGGATTTACAGCCTTACAGT+TGG | + | chr3_2:85294690-85294709 | Msa0432970:CDS | 40.0% | |
| ATGAGAAGGAAGAATGGTAG+CGG | - | chr3_2:85294772-85294791 | None:intergenic | 40.0% | |
| ! | GCTTGAATATCTTTGGAAGG+AGG | - | chr3_2:85294810-85294829 | None:intergenic | 40.0% |
| ATTCAAGCCTAACCATCTTC+AGG | + | chr3_2:85294822-85294841 | Msa0432970:CDS | 40.0% | |
| TCAAGTTCCTGAAGATGGTT+AGG | - | chr3_2:85294832-85294851 | None:intergenic | 40.0% | |
| AAGCATCAAGTTCCTGAAGA+TGG | - | chr3_2:85294837-85294856 | None:intergenic | 40.0% | |
| ACTTGATGCTTCTGAGTATG+AGG | + | chr3_2:85294846-85294865 | Msa0432970:CDS | 40.0% | |
| AGTACGTAGTATGTCACTCA+GGG | + | chr3_2:85294891-85294910 | Msa0432970:CDS | 40.0% | |
| TACTCCAAGCTTTCCAACTT+AGG | + | chr3_2:85295047-85295066 | Msa0432970:intron | 40.0% | |
| CCATCATTATCACTATCACG+TGG | - | chr3_2:85295102-85295121 | None:intergenic | 40.0% | |
| ! | CCACGTGATAGTGATAATGA+TGG | + | chr3_2:85295099-85295118 | Msa0432970:CDS | 40.0% |
| GATCATTGAAGCTGTTACTG+CGG | - | chr3_2:85295221-85295240 | None:intergenic | 40.0% | |
| GATCATTGAAGCTGTTACTG+TGG | - | chr3_2:85295221-85295240 | None:intergenic | 40.0% | |
| CTTCATTGAAGCTGTTACTG+TGG | - | chr3_2:85295275-85295294 | None:intergenic | 40.0% | |
| TGGTCATTTCCTTCCTAAGT+TGG | + | chr3_2:85295677-85295696 | Msa0432970:three_prime_UTR | 40.0% | |
| AAAGATGGTACGAGAGTGAA+AGG | + | chr3_2:85295738-85295757 | Msa0432970:three_prime_UTR | 40.0% | |
| AGTGACGTTTGTGAATACTC+AGG | - | chr3_2:85295936-85295955 | None:intergenic | 40.0% | |
| GTGTCTCTCTCATCTTTGAC+TGG | + | chr3_2:85291591-85291610 | Msa0432970:five_prime_UTR | 45.0% | |
| !! | TAACATGGGAGCACCATTTG+AGG | + | chr3_2:85292048-85292067 | Msa0432970:exon | 45.0% |
| !! | AACATGGGAGCACCATTTGA+GGG | + | chr3_2:85292049-85292068 | Msa0432970:exon | 45.0% |
| TGTTCTCCGAAAGCAATGAC+CGG | - | chr3_2:85292271-85292290 | None:intergenic | 45.0% | |
| ! | TTGGCATCTACTGCCATTTG+TGG | + | chr3_2:85292334-85292353 | Msa0432970:CDS | 45.0% |
| !! | GTACCAAGCTCTTTCTAGCT+TGG | + | chr3_2:85292470-85292489 | Msa0432970:CDS | 45.0% |
| TGTGTTGCAGGGTTTGTGTT+TGG | + | chr3_2:85292595-85292614 | Msa0432970:intron | 45.0% | |
| TTGCAGGGTTTGTGTTTGGA+CGG | + | chr3_2:85292599-85292618 | Msa0432970:intron | 45.0% | |
| ATTGTTTGAACCACAGGGAC+TGG | + | chr3_2:85292823-85292842 | Msa0432970:intron | 45.0% | |
| ! | CGACGAAGGATTTTCAACCT+TGG | - | chr3_2:85292867-85292886 | None:intergenic | 45.0% |
| AATTGCAATTCCTCCGACGA+AGG | - | chr3_2:85292881-85292900 | None:intergenic | 45.0% | |
| CGGAGGAATTGCAATTCCAA+TGG | + | chr3_2:85292885-85292904 | Msa0432970:CDS | 45.0% | |
| TTCCAATGGCGGTATACCAA+TGG | + | chr3_2:85292899-85292918 | Msa0432970:CDS | 45.0% | |
| ATCCATTGGTATACCGCCAT+TGG | - | chr3_2:85292904-85292923 | None:intergenic | 45.0% | |
| ! | TTCCAGTGATGGTAGTGTTG+TGG | + | chr3_2:85293158-85293177 | Msa0432970:CDS | 45.0% |
| TTCCAAGTGGTGTTCCTAGA+AGG | + | chr3_2:85293212-85293231 | Msa0432970:CDS | 45.0% | |
| AGTGGACAAAACAGCCTTCT+AGG | - | chr3_2:85293229-85293248 | None:intergenic | 45.0% | |
| TAAAGAGATGCAGGTTCCCA+GGG | - | chr3_2:85293253-85293272 | None:intergenic | 45.0% | |
| ATAAAGAGATGCAGGTTCCC+AGG | - | chr3_2:85293254-85293273 | None:intergenic | 45.0% | |
| GTCCAGTGATAAAGAGATGC+AGG | - | chr3_2:85293262-85293281 | None:intergenic | 45.0% | |
| CAAACTGCAGGATATGTGGA+AGG | + | chr3_2:85293533-85293552 | Msa0432970:intron | 45.0% | |
| ACTCTGATATGTGGTCTCCT+TGG | + | chr3_2:85293814-85293833 | Msa0432970:CDS | 45.0% | |
| TGTGGAAGGACTCCATTTGA+AGG | - | chr3_2:85293847-85293866 | None:intergenic | 45.0% | |
| TTTGTATGCATGGGAGACTG+TGG | - | chr3_2:85293865-85293884 | None:intergenic | 45.0% | |
| AGAGTTTGGCAGTTCTTAGG+AGG | + | chr3_2:85293884-85293903 | Msa0432970:CDS | 45.0% | |
| TCGGATCAGCTGCAAATCAA+TGG | - | chr3_2:85293997-85294016 | None:intergenic | 45.0% | |
| ATTTGCAGCTGATCCGAAAG+AGG | + | chr3_2:85294000-85294019 | Msa0432970:intron | 45.0% | |
| TTTGCAGCTGATCCGAAAGA+GGG | + | chr3_2:85294001-85294020 | Msa0432970:intron | 45.0% | |
| ! | CGCTTTTCACAACCCTCTTT+CGG | - | chr3_2:85294016-85294035 | None:intergenic | 45.0% |
| CTGTTGTTCCATGCATTCCT+TGG | - | chr3_2:85294039-85294058 | None:intergenic | 45.0% | |
| TCTTGAACAAGTCTCGTGTC+TGG | - | chr3_2:85294172-85294191 | None:intergenic | 45.0% | |
| TGATACCAAGGGTTGTGCAA+TGG | + | chr3_2:85294275-85294294 | Msa0432970:CDS | 45.0% | |
| ! | GGATACCTACCTCGGTTTTA+TGG | + | chr3_2:85294424-85294443 | Msa0432970:CDS | 45.0% |
| TATCCCCATAAAACCGAGGT+AGG | - | chr3_2:85294432-85294451 | None:intergenic | 45.0% | |
| TCTTCCTGGGAATCAGTTCT+GGG | + | chr3_2:85294476-85294495 | Msa0432970:CDS | 45.0% | |
| !! | ATTACTTGTAACGCCGGCTT+GGG | - | chr3_2:85294527-85294546 | None:intergenic | 45.0% |
| ! | AATTACTTGTAACGCCGGCT+TGG | - | chr3_2:85294528-85294547 | None:intergenic | 45.0% |
| TGGTACTGTCTCCACAAATG+AGG | - | chr3_2:85294656-85294675 | None:intergenic | 45.0% | |
| GTACCATTCAAGACCATAGC+TGG | + | chr3_2:85294670-85294689 | Msa0432970:CDS | 45.0% | |
| GACATACTACGTACTGCAGA+TGG | - | chr3_2:85294886-85294905 | None:intergenic | 45.0% | |
| CAGTACGTAGTATGTCACTC+AGG | + | chr3_2:85294890-85294909 | Msa0432970:CDS | 45.0% | |
| TGGATGAGATGACAACCAAC+AGG | + | chr3_2:85295154-85295173 | Msa0432970:CDS | 45.0% | |
| GGATGAGATGACAACCAACA+GGG | + | chr3_2:85295155-85295174 | Msa0432970:CDS | 45.0% | |
| GATGAGATGACAACCAACAG+GGG | + | chr3_2:85295156-85295175 | Msa0432970:CDS | 45.0% | |
| AAGTTTCAACTCTCCCCTGT+TGG | - | chr3_2:85295172-85295191 | None:intergenic | 45.0% | |
| AATATTCAGACAGCACCTCC+AGG | - | chr3_2:85295415-85295434 | None:intergenic | 45.0% | |
| ACTTCATGGCCAACTTAGGA+AGG | - | chr3_2:85295689-85295708 | None:intergenic | 45.0% | |
| GTGAACTTCATGGCCAACTT+AGG | - | chr3_2:85295693-85295712 | None:intergenic | 45.0% | |
| !! | GTTAGGTTGAGGGGAAAAGA+TGG | + | chr3_2:85295723-85295742 | Msa0432970:three_prime_UTR | 45.0% |
| AAAAAAAAGACGGGGGAGCA+AGG | + | chr3_2:85295770-85295789 | Msa0432970:three_prime_UTR | 45.0% | |
| CGTTTGTGAATACTCAGGTG+TGG | - | chr3_2:85295931-85295950 | None:intergenic | 45.0% | |
| !! | AAAAAATTAATAATCATAAA+AGG | - | chr3_2:85291803-85291822 | None:intergenic | 5.0% |
| TTTCCTCCTTCAGCTGTGAG+AGG | + | chr3_2:85292021-85292040 | Msa0432970:five_prime_UTR | 50.0% | |
| TTTCCTCTCACAGCTGAAGG+AGG | - | chr3_2:85292027-85292046 | None:intergenic | 50.0% | |
| ATTCTTTGCTTCCGCGCTTC+CGG | + | chr3_2:85292249-85292268 | Msa0432970:CDS | 50.0% | |
| AAGAGCTTGGTACCCAGTTG+AGG | - | chr3_2:85292463-85292482 | None:intergenic | 50.0% | |
| AGCCCAAGCTAGAAAGAGCT+TGG | - | chr3_2:85292476-85292495 | None:intergenic | 50.0% | |
| !! | AAGCTCTTTCTAGCTTGGGC+TGG | + | chr3_2:85292475-85292494 | Msa0432970:CDS | 50.0% |
| !! | TCTTTCTAGCTTGGGCTGGT+TGG | + | chr3_2:85292479-85292498 | Msa0432970:CDS | 50.0% |
| ! | TTTGAACCACAGGGACTGGT+AGG | + | chr3_2:85292827-85292846 | Msa0432970:intron | 50.0% |
| GGTTGAAAATCCTTCGTCGG+AGG | + | chr3_2:85292868-85292887 | Msa0432970:CDS | 50.0% | |
| TTCAATTCAGGGAGGCTACG+AGG | + | chr3_2:85293115-85293134 | Msa0432970:intron | 50.0% | |
| GTCCACAACACTACCATCAC+TGG | - | chr3_2:85293163-85293182 | None:intergenic | 50.0% | |
| ! | AGCCTTCTAGGAACACCACT+TGG | - | chr3_2:85293217-85293236 | None:intergenic | 50.0% |
| !! | GCTGTTTTGTCCACTTCCCT+GGG | + | chr3_2:85293234-85293253 | Msa0432970:CDS | 50.0% |
| TCATAGCGTGGCTTCTCAGA+TGG | + | chr3_2:85293623-85293642 | Msa0432970:CDS | 50.0% | |
| ! | GGTAGGCAGATGGCTTTTGA+AGG | - | chr3_2:85293668-85293687 | None:intergenic | 50.0% |
| CATTTGAAGGAGGAAGGCCA+AGG | - | chr3_2:85293834-85293853 | None:intergenic | 50.0% | |
| ! | CTTGGCCTTCCTCCTTCAAA+TGG | + | chr3_2:85293832-85293851 | Msa0432970:CDS | 50.0% |
| GGACTCCATTTGAAGGAGGA+AGG | - | chr3_2:85293840-85293859 | None:intergenic | 50.0% | |
| GGAAGGACTCCATTTGAAGG+AGG | - | chr3_2:85293844-85293863 | None:intergenic | 50.0% | |
| TATGCATGGGAGACTGTGGA+AGG | - | chr3_2:85293861-85293880 | None:intergenic | 50.0% | |
| TTTGGCAGTTCTTAGGAGGC+AGG | + | chr3_2:85293888-85293907 | Msa0432970:CDS | 50.0% | |
| !! | GAAAAGCGCCAAGGAATGCA+TGG | + | chr3_2:85294028-85294047 | Msa0432970:CDS | 50.0% |
| AGGTTCCATTGCACAACCCT+TGG | - | chr3_2:85294283-85294302 | None:intergenic | 50.0% | |
| CAATCAGGAGGGACTGCAAT+AGG | - | chr3_2:85294371-85294390 | None:intergenic | 50.0% | |
| CTATTGCAGTCCCTCCTGAT+TGG | + | chr3_2:85294369-85294388 | Msa0432970:CDS | 50.0% | |
| GTCTTCCTGGGAATCAGTTC+TGG | + | chr3_2:85294475-85294494 | Msa0432970:CDS | 50.0% | |
| ! | CTTTCCCAGAACTGATTCCC+AGG | - | chr3_2:85294483-85294502 | None:intergenic | 50.0% |
| !! | CTGGGAATCAGTTCTGGGAA+AGG | + | chr3_2:85294481-85294500 | Msa0432970:CDS | 50.0% |
| !! | TTACTTGTAACGCCGGCTTG+GGG | - | chr3_2:85294526-85294545 | None:intergenic | 50.0% |
| TGTTCTGTTTCGGGGTCACA+TGG | + | chr3_2:85294722-85294741 | Msa0432970:CDS | 50.0% | |
| GTCACATGGATACCGATAGG+TGG | + | chr3_2:85294736-85294755 | Msa0432970:CDS | 50.0% | |
| GTACTAGGGCAGATTTGACC+TGG | + | chr3_2:85295394-85295413 | Msa0432970:intron | 50.0% | |
| GGTACGAGAGTGAAAGGACA+AGG | + | chr3_2:85295744-85295763 | Msa0432970:three_prime_UTR | 50.0% | |
| TGGGTCTGCGCAATCTGTTC+CGG | + | chr3_2:85292118-85292137 | Msa0432970:CDS | 55.0% | |
| GAAAGCAATGACCGGAAGCG+CGG | - | chr3_2:85292263-85292282 | None:intergenic | 55.0% | |
| GCGCTTCCGGTCATTGCTTT+CGG | + | chr3_2:85292262-85292281 | Msa0432970:CDS | 55.0% | |
| ATGCCTGACGACGTTCCAAG+TGG | + | chr3_2:85293199-85293218 | Msa0432970:CDS | 55.0% | |
| ACACCACTTGGAACGTCGTC+AGG | - | chr3_2:85293205-85293224 | None:intergenic | 55.0% | |
| !! | GGCTGTTTTGTCCACTTCCC+TGG | + | chr3_2:85293233-85293252 | Msa0432970:CDS | 55.0% |
| !! | GAGGGTTGTGAAAAGCGCCA+AGG | + | chr3_2:85294019-85294038 | Msa0432970:CDS | 55.0% |
| CAGGAGGGACTGCAATAGGT+TGG | - | chr3_2:85294367-85294386 | None:intergenic | 55.0% | |
| GGGGTCACATGGATACCGAT+AGG | + | chr3_2:85294733-85294752 | Msa0432970:CDS | 55.0% | |
| CTAGGGCAGATTTGACCTGG+AGG | + | chr3_2:85295397-85295416 | Msa0432970:intron | 55.0% | |
| GTGAGAGCAGTCCTCTTCAG+AGG | - | chr3_2:85295483-85295502 | None:intergenic | 55.0% | |
| GCGCAATCTGTTCCGGCGTT+AGG | + | chr3_2:85292125-85292144 | Msa0432970:CDS | 60.0% | |
| AACTCGCCTACCAGTCCCTG+TGG | - | chr3_2:85292836-85292855 | None:intergenic | 60.0% | |
| AGGCGAGTTCAGCACTCCCA+AGG | + | chr3_2:85292847-85292866 | Msa0432970:CDS | 60.0% | |
| GATGCAGGTTCCCAGGGAAG+TGG | - | chr3_2:85293247-85293266 | None:intergenic | 60.0% | |
| TCCTCTTCGTCACCCCAAGC+CGG | + | chr3_2:85294511-85294530 | Msa0432970:CDS | 60.0% | |
| !! | GCCGGCTTGGGGTGACGAAG+AGG | - | chr3_2:85294515-85294534 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 85291574 | 85295986 | 85291574 | ID=Msa0432970;Name=Msa0432970 |
| chr3_2 | mRNA | 85291574 | 85295986 | 85291574 | ID=Msa0432970-mRNA-1;Parent=Msa0432970;Name=Msa0432970-mRNA-1;_AED=0.11;_eAED=0.11;_QI=478|0.90|0.91|1|1|1|12|463|682 |
| chr3_2 | exon | 85291574 | 85292146 | 85291574 | ID=Msa0432970-mRNA-1:exon:24358;Parent=Msa0432970-mRNA-1 |
| chr3_2 | exon | 85292225 | 85292500 | 85292225 | ID=Msa0432970-mRNA-1:exon:24359;Parent=Msa0432970-mRNA-1 |
| chr3_2 | exon | 85292605 | 85292743 | 85292605 | ID=Msa0432970-mRNA-1:exon:24360;Parent=Msa0432970-mRNA-1 |
| chr3_2 | exon | 85292839 | 85293004 | 85292839 | ID=Msa0432970-mRNA-1:exon:24361;Parent=Msa0432970-mRNA-1 |
| chr3_2 | exon | 85293125 | 85293291 | 85293125 | ID=Msa0432970-mRNA-1:exon:24362;Parent=Msa0432970-mRNA-1 |
| chr3_2 | exon | 85293543 | 85293716 | 85293543 | ID=Msa0432970-mRNA-1:exon:24363;Parent=Msa0432970-mRNA-1 |
| chr3_2 | exon | 85293814 | 85293909 | 85293814 | ID=Msa0432970-mRNA-1:exon:24364;Parent=Msa0432970-mRNA-1 |
| chr3_2 | exon | 85294008 | 85294124 | 85294008 | ID=Msa0432970-mRNA-1:exon:24365;Parent=Msa0432970-mRNA-1 |
| chr3_2 | exon | 85294234 | 85294541 | 85294234 | ID=Msa0432970-mRNA-1:exon:24366;Parent=Msa0432970-mRNA-1 |
| chr3_2 | exon | 85294633 | 85294912 | 85294633 | ID=Msa0432970-mRNA-1:exon:24367;Parent=Msa0432970-mRNA-1 |
| chr3_2 | exon | 85295090 | 85295197 | 85295090 | ID=Msa0432970-mRNA-1:exon:24368;Parent=Msa0432970-mRNA-1 |
| chr3_2 | exon | 85295401 | 85295986 | 85295401 | ID=Msa0432970-mRNA-1:exon:24369;Parent=Msa0432970-mRNA-1 |
| chr3_2 | five_prime_UTR | 85291574 | 85292051 | 85291574 | ID=Msa0432970-mRNA-1:five_prime_utr;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85292052 | 85292146 | 85292052 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85292225 | 85292500 | 85292225 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85292605 | 85292743 | 85292605 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85292839 | 85293004 | 85292839 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85293125 | 85293291 | 85293125 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85293543 | 85293716 | 85293543 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85293814 | 85293909 | 85293814 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85294008 | 85294124 | 85294008 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85294234 | 85294541 | 85294234 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85294633 | 85294912 | 85294633 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85295090 | 85295197 | 85295090 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | CDS | 85295401 | 85295523 | 85295401 | ID=Msa0432970-mRNA-1:cds;Parent=Msa0432970-mRNA-1 |
| chr3_2 | three_prime_UTR | 85295524 | 85295986 | 85295524 | ID=Msa0432970-mRNA-1:three_prime_utr;Parent=Msa0432970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
