AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0950570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0950570 MtrunA17_Chr6g0466691 90.530 264 15 1 1 264 1 254 8.57e-173 476
Msa0950570 MtrunA17_Chr2g0316751 52.217 203 89 3 69 264 70 271 7.01e-64 201
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0950570 AT3G15110.1 49.749 199 87 3 69 262 76 266 4.25e-59 189

Find 53 sgRNAs with CRISPR-Local

Find 615 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTTTGTTGCTTTATTC+TGG 0.170230 6_3:+39198692 Msa0950570:CDS
TCAAAATTTCTCTTATAAAT+AGG 0.184397 6_3:-39199027 None:intergenic
TGGTGGGTTGTTAAGGAAAT+TGG 0.207313 6_3:-39191036 None:intergenic
GAATAGCACAAAAGGACTTA+TGG 0.287634 6_3:+39197461 Msa0950570:CDS
CACTACAGAACGGTAATAAA+TGG 0.290677 6_3:+39198629 Msa0950570:intron
ACCTTATGGTGATTGTTATC+TGG 0.328009 6_3:-39198520 None:intergenic
AAACATTATGCTCATGTATA+AGG 0.330276 6_3:-39198927 None:intergenic
TACTTCATGAGAAGGATTAA+TGG 0.341332 6_3:-39191115 None:intergenic
GGAGGTTTGTGAAGAGAAAT+TGG 0.346245 6_3:-39191014 None:intergenic
AGAAATTGTCTGAAATTGTT+TGG 0.350157 6_3:-39197611 None:intergenic
GTGTATGGAATAAACTCTTT+TGG 0.353719 6_3:+39198674 Msa0950570:CDS
ACTTGATGATCCTTTCTCAT+AGG 0.358962 6_3:-39198732 None:intergenic
TTTGATCCTGCGCTGGATAG+TGG 0.365094 6_3:-39191274 None:intergenic
AACAATTTCAGACAATTTCT+CGG 0.370456 6_3:+39197614 Msa0950570:CDS
GCTCCTAACAATGCTTTATC+TGG 0.378868 6_3:-39197519 None:intergenic
TCACCAGATAAAGCATTGTT+AGG 0.382378 6_3:+39197516 Msa0950570:CDS
ATTGTGTTAATATTAAATTA+TGG 0.391333 6_3:-39198992 None:intergenic
AATAGCACAAAAGGACTTAT+GGG 0.391794 6_3:+39197462 Msa0950570:CDS
AGAAAAGTGGTGGGTTGTTA+AGG 0.402804 6_3:-39191043 None:intergenic
TAAATTAACCACTGCAAAAG+TGG 0.411912 6_3:+39191155 Msa0950570:CDS
AGCATTGTTAGGAGCAGTTA+TGG 0.422251 6_3:+39197527 Msa0950570:CDS
TTCCATACACAAATGTAGAT+AGG 0.437409 6_3:-39198661 None:intergenic
GGTGGGTTGTTAAGGAAATT+GGG 0.459882 6_3:-39191035 None:intergenic
GAAAACTGAAAGCAAAATCA+TGG 0.462629 6_3:+39198760 Msa0950570:CDS
GAACAACACTGATAGTTACT+TGG 0.464641 6_3:-39191221 None:intergenic
CATGTAGCAGTAGCAACTAT+TGG 0.465797 6_3:-39198876 None:intergenic
TTATGTTGAAATTTATGAAG+TGG 0.484183 6_3:-39191075 None:intergenic
TCATCATTGAATAGCACAAA+AGG 0.490794 6_3:+39197453 Msa0950570:CDS
GATCAAAAGAGCAAAACAAT+TGG 0.495344 6_3:+39191290 Msa0950570:CDS
GTAAGTGAGAGTGCAACATT+TGG 0.501960 6_3:-39190981 None:intergenic
TACCTATCTACATTTGTGTA+TGG 0.525187 6_3:+39198659 Msa0950570:CDS
TTGTTAGGAGCAGTTATGGC+TGG 0.532963 6_3:+39197531 Msa0950570:CDS
ATTTCTCTTATAAATAGGAC+CGG 0.533377 6_3:-39199022 None:intergenic
GCACTCAACACCTATGAGAA+AGG 0.545098 6_3:+39198722 Msa0950570:CDS
TTGATCCTGCGCTGGATAGT+GGG 0.548692 6_3:-39191273 None:intergenic
GCCAGATAACAATCACCATA+AGG 0.551485 6_3:+39198519 Msa0950570:CDS
AACAATGCTTTATCTGGTGA+AGG 0.551642 6_3:-39197513 None:intergenic
CTCTTATAAATAGGACCGGA+GGG 0.554392 6_3:-39199018 None:intergenic
TATTAACACAATACTCCCTC+CGG 0.561900 6_3:+39199003 Msa0950570:three_prime_UTR
AATGCTTTATCTGGTGAAGG+TGG 0.571857 6_3:-39197510 None:intergenic
CATAGGTGTTGAGTGCAAGT+TGG 0.575800 6_3:-39198715 None:intergenic
TATTTCCCACTATCCAGCGC+AGG 0.577116 6_3:+39191268 Msa0950570:CDS
GTGGTTAATTTATTTAGCCA+CGG 0.585169 6_3:-39191144 None:intergenic
GGGAAATAAGAAAACAGCAA+TGG 0.587708 6_3:-39191253 None:intergenic
TAAAAGATAAAGCTAAGTGA+AGG 0.594374 6_3:-39190948 None:intergenic
TGAAATTTATGAAGTGGAGA+TGG 0.606676 6_3:-39191069 None:intergenic
TCTCTTATAAATAGGACCGG+AGG 0.614852 6_3:-39199019 None:intergenic
GTGGAGATGGTGAAGAAAAG+TGG 0.619307 6_3:-39191056 None:intergenic
TATGAGAAAGGATCATCAAG+TGG 0.631593 6_3:+39198734 Msa0950570:CDS
AGATGGTGAAGAAAAGTGGT+GGG 0.654585 6_3:-39191052 None:intergenic
TAGTTGCTACTGCTACATGT+TGG 0.654974 6_3:+39198880 Msa0950570:three_prime_UTR
GAGATGGTGAAGAAAAGTGG+TGG 0.667341 6_3:-39191053 None:intergenic
GGGTTGTTAAGGAAATTGGG+AGG 0.688045 6_3:-39191032 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTCATTCAATTTA+TGG + chr6_3:39191343-39191362 Msa0950570:intron 10.0%
!!! TTAAATTTTCTCTATTTTAT+TGG + chr6_3:39191452-39191471 Msa0950570:intron 10.0%
!! AAGTAATTCTATAATTTATT+TGG - chr6_3:39194204-39194223 None:intergenic 10.0%
!! ATATACACATATATATAATT+TGG - chr6_3:39195651-39195670 None:intergenic 10.0%
!! GTAATTTAAATAATATTGAA+TGG + chr6_3:39196994-39197013 Msa0950570:intron 10.0%
!! AAAAATCAATATATAATAAG+TGG - chr6_3:39197334-39197353 None:intergenic 10.0%
!!! TATTTTAAAAGTAATAACAA+CGG - chr6_3:39198333-39198352 None:intergenic 10.0%
!! ATTGTGTTAATATTAAATTA+TGG - chr6_3:39198995-39199014 None:intergenic 10.0%
!!! TTATTGGAATATTTTATTTG+AGG + chr6_3:39191468-39191487 Msa0950570:intron 15.0%
!!! ATAAGATTTAATTGTAGTTT+TGG + chr6_3:39191573-39191592 Msa0950570:intron 15.0%
!!! ATTTTAAAATTTGTCAGTTT+TGG + chr6_3:39191634-39191653 Msa0950570:intron 15.0%
!!! AAACTGTCAATTTTAAAAAT+AGG + chr6_3:39192004-39192023 Msa0950570:intron 15.0%
!!! TTTTATTTGGTAAATTTATG+CGG + chr6_3:39192044-39192063 Msa0950570:intron 15.0%
!!! ATCAATTATTTTGATACAAA+GGG + chr6_3:39192246-39192265 Msa0950570:intron 15.0%
!!! AATTTAAAATATACTAACTC+TGG + chr6_3:39192382-39192401 Msa0950570:intron 15.0%
!! ATTCTAGATAAATTTAGTAT+GGG - chr6_3:39194120-39194139 None:intergenic 15.0%
!! TATTCTAGATAAATTTAGTA+TGG - chr6_3:39194121-39194140 None:intergenic 15.0%
!!! GAATCTGAAATAAAATAAAA+GGG + chr6_3:39194345-39194364 Msa0950570:intron 15.0%
!!! ATTAAAACATGTTTAAAATG+TGG - chr6_3:39194836-39194855 None:intergenic 15.0%
!! AATTAATTTCAGAATAAAGA+CGG - chr6_3:39195000-39195019 None:intergenic 15.0%
!! AAAATAAGGAACTTTAAATA+TGG - chr6_3:39195137-39195156 None:intergenic 15.0%
!! AATGTACAATAAATATGTAA+TGG + chr6_3:39195225-39195244 Msa0950570:intron 15.0%
!!! TAAAAAAATGTAACCAATTT+TGG + chr6_3:39195452-39195471 Msa0950570:intron 15.0%
!! TAAACATATTCCTAATATAA+AGG + chr6_3:39195578-39195597 Msa0950570:intron 15.0%
!!! TCTAAATTTTCCTTTATATT+AGG - chr6_3:39195591-39195610 None:intergenic 15.0%
!! AAATATTAGAACAAAACAAT+GGG + chr6_3:39195736-39195755 Msa0950570:intron 15.0%
!!! AAAATATGATGAATTCTTTT+TGG - chr6_3:39197127-39197146 None:intergenic 15.0%
!!! CATAATTCTAAAAAATAAAG+TGG - chr6_3:39197308-39197327 None:intergenic 15.0%
!!! CACTTTATTTTTTAGAATTA+TGG + chr6_3:39197306-39197325 Msa0950570:intron 15.0%
!! ATAAGATCACATATATTATA+GGG - chr6_3:39197358-39197377 None:intergenic 15.0%
!! TATAAGATCACATATATTAT+AGG - chr6_3:39197359-39197378 None:intergenic 15.0%
!! TTTCATCAAAGAATATTATA+TGG - chr6_3:39197389-39197408 None:intergenic 15.0%
!! TATTCTTTGATGAAATAAAT+TGG + chr6_3:39197394-39197413 Msa0950570:intron 15.0%
!! TAACTATTCATTCATAAAAA+AGG - chr6_3:39197666-39197685 None:intergenic 15.0%
!! ATAATATTCTTTCATCTTAA+TGG + chr6_3:39198432-39198451 Msa0950570:intron 15.0%
!! CATAAAAAATGAAAACATTA+AGG - chr6_3:39198574-39198593 None:intergenic 15.0%
!! TTATGTTGAAATTTATGAAG+TGG - chr6_3:39191078-39191097 None:intergenic 20.0%
!!! CACATATTTTTACCATTTTA+CGG + chr6_3:39191598-39191617 Msa0950570:intron 20.0%
!! TCCAAAATCATCATTAAAAA+AGG + chr6_3:39191684-39191703 Msa0950570:intron 20.0%
!! CCAAAATCATCATTAAAAAA+GGG + chr6_3:39191685-39191704 Msa0950570:intron 20.0%
!! CAAAATCATCATTAAAAAAG+GGG + chr6_3:39191686-39191705 Msa0950570:intron 20.0%
!! TAAATGACGTGATATATTAT+AGG - chr6_3:39191935-39191954 None:intergenic 20.0%
!! CATGTAAGTTTAAAAATGTT+GGG - chr6_3:39192072-39192091 None:intergenic 20.0%
!! GTGGAAATAATATTAATTAC+AGG + chr6_3:39192163-39192182 Msa0950570:intron 20.0%
!!! GATCAATTATTTTGATACAA+AGG + chr6_3:39192245-39192264 Msa0950570:intron 20.0%
!! CAATTTAATAGAACATGAAT+AGG - chr6_3:39192907-39192926 None:intergenic 20.0%
!! ATTAAATTGATCCAAAAAAG+TGG + chr6_3:39192918-39192937 Msa0950570:intron 20.0%
!!! CTTTTCATTTAATGAAAGAT+TGG - chr6_3:39193107-39193126 None:intergenic 20.0%
!! CAAATTAAATTATTGACCTT+CGG + chr6_3:39193425-39193444 Msa0950570:intron 20.0%
!!! TGATAAGTTTATTTTGAAAG+CGG - chr6_3:39193571-39193590 None:intergenic 20.0%
!!! ATTCATCATATTTTTCCTAT+TGG - chr6_3:39193642-39193661 None:intergenic 20.0%
!!! CGAATCTGAAATAAAATAAA+AGG + chr6_3:39194344-39194363 Msa0950570:intron 20.0%
!! TGAAATAAAATAAAAGGGAT+TGG + chr6_3:39194350-39194369 Msa0950570:intron 20.0%
!! GAAATAAAATAAAAGGGATT+GGG + chr6_3:39194351-39194370 Msa0950570:intron 20.0%
!! AAATAAAATAAAAGGGATTG+GGG + chr6_3:39194352-39194371 Msa0950570:intron 20.0%
!!! TATTATCTGAGTTGATTTTA+CGG + chr6_3:39194628-39194647 Msa0950570:intron 20.0%
!!! TGAATATCTTATAACCTTTT+AGG - chr6_3:39195072-39195091 None:intergenic 20.0%
!! GAACTTTAAATATGGAATTT+CGG - chr6_3:39195129-39195148 None:intergenic 20.0%
!! GAAATATTAGAACAAAACAA+TGG + chr6_3:39195735-39195754 Msa0950570:intron 20.0%
!! TATGAATTACTAGAATATGT+TGG - chr6_3:39195785-39195804 None:intergenic 20.0%
!! ATCACATATTAACATTCTAA+TGG + chr6_3:39195805-39195824 Msa0950570:intron 20.0%
!! GATATAAGTTTCATGTATTT+CGG - chr6_3:39196180-39196199 None:intergenic 20.0%
!! AAACTTATATCCAAATTGAA+GGG + chr6_3:39196189-39196208 Msa0950570:intron 20.0%
!! GGGATTTAAGAAATTATTAT+GGG - chr6_3:39196407-39196426 None:intergenic 20.0%
!! TGGGATTTAAGAAATTATTA+TGG - chr6_3:39196408-39196427 None:intergenic 20.0%
!!! CACTATTAAGTTTGAATTTT+TGG - chr6_3:39196454-39196473 None:intergenic 20.0%
!! TTAGAAGTTAAATGAAGAAT+TGG + chr6_3:39196719-39196738 Msa0950570:intron 20.0%
!! TAGAAAAATGTAGAAAAACA+TGG + chr6_3:39196966-39196985 Msa0950570:intron 20.0%
!!! AGAATTCATCATATTTTCAA+TGG + chr6_3:39197130-39197149 Msa0950570:intron 20.0%
!! ACTCATAACATACTAATAAT+TGG + chr6_3:39197184-39197203 Msa0950570:intron 20.0%
!!! ATTGGTGATTTTAGAAATAT+AGG + chr6_3:39197412-39197431 Msa0950570:intron 20.0%
!!! AATGTGTTTATTTTATCTCT+AGG + chr6_3:39197779-39197798 Msa0950570:intron 20.0%
!!! ATGTGTTTATTTTATCTCTA+GGG + chr6_3:39197780-39197799 Msa0950570:intron 20.0%
!!! ACTTATTTGAGATAAGTTTA+GGG - chr6_3:39198551-39198570 None:intergenic 20.0%
! TAAAAGATAAAGCTAAGTGA+AGG - chr6_3:39190951-39190970 None:intergenic 25.0%
! TCATCTATAGCATCAAAAAT+GGG - chr6_3:39191189-39191208 None:intergenic 25.0%
! TAAACATGTGTGTAGATATA+TGG + chr6_3:39191408-39191427 Msa0950570:intron 25.0%
!! AAATCCTTTTGCAAAGAAAT+TGG + chr6_3:39191539-39191558 Msa0950570:intron 25.0%
! TAAACCAATTTCTTTGCAAA+AGG - chr6_3:39191546-39191565 None:intergenic 25.0%
! CGTAAAATGGTAAAAATATG+TGG - chr6_3:39191600-39191619 None:intergenic 25.0%
!!! CCCTTTTTTAATGATGATTT+TGG - chr6_3:39191688-39191707 None:intergenic 25.0%
! ATCATTAAAAAAGGGGAAAA+GGG + chr6_3:39191693-39191712 Msa0950570:intron 25.0%
! GCATGTAAGTTTAAAAATGT+TGG - chr6_3:39192073-39192092 None:intergenic 25.0%
! GGTAGATATTTAATTGAAAG+TGG + chr6_3:39192141-39192160 Msa0950570:intron 25.0%
! AGATATTTAATTGAAAGTGG+TGG + chr6_3:39192144-39192163 Msa0950570:intron 25.0%
! TTCATAATAATTCATGCATG+AGG - chr6_3:39192299-39192318 None:intergenic 25.0%
! GAATACAAACAACTAAGTTT+CGG + chr6_3:39192316-39192335 Msa0950570:intron 25.0%
! AAATAAGAAAAAGTTGAGTC+AGG + chr6_3:39192413-39192432 Msa0950570:intron 25.0%
! AGTTACATTAGTATAGATAG+TGG + chr6_3:39192547-39192566 Msa0950570:intron 25.0%
! GTTACATTAGTATAGATAGT+GGG + chr6_3:39192548-39192567 Msa0950570:intron 25.0%
!!! CATTTTGATATCACGAAATT+TGG - chr6_3:39192700-39192719 None:intergenic 25.0%
! CAAATTTCGTGATATCAAAA+TGG + chr6_3:39192698-39192717 Msa0950570:intron 25.0%
! TTTAATGAAAGATTGGAGTT+TGG - chr6_3:39193100-39193119 None:intergenic 25.0%
! CGAAGGTCAATAATTTAATT+TGG - chr6_3:39193427-39193446 None:intergenic 25.0%
!!! TTATTTTATTTCAGATTCGC+AGG - chr6_3:39194343-39194362 None:intergenic 25.0%
!! ACGTCTTTATTATCAGTTTT+AGG - chr6_3:39194970-39194989 None:intergenic 25.0%
! TTTCCAAAGTTTGGAAAATA+AGG - chr6_3:39195151-39195170 None:intergenic 25.0%
!! ATTCATTTTATTCGACTATG+TGG - chr6_3:39195370-39195389 None:intergenic 25.0%
!! AATAGAATTGTCACATGTTT+TGG - chr6_3:39195626-39195645 None:intergenic 25.0%
! GAAACTTATATCCAAATTGA+AGG + chr6_3:39196188-39196207 Msa0950570:intron 25.0%
! CCTGGAATTAAGTAATTATT+GGG - chr6_3:39196237-39196256 None:intergenic 25.0%
! ACCTGGAATTAAGTAATTAT+TGG - chr6_3:39196238-39196257 None:intergenic 25.0%
!!! TTTTTGAGACGTAATTTGAA+TGG - chr6_3:39196299-39196318 None:intergenic 25.0%
! AAGAAATTATTATGGGAAAG+TGG - chr6_3:39196400-39196419 None:intergenic 25.0%
!!! AAGTTTGAATTTTTGGAGAA+TGG - chr6_3:39196447-39196466 None:intergenic 25.0%
! ATTGTTCAATTCTATGCTTT+AGG - chr6_3:39196556-39196575 None:intergenic 25.0%
!!! TTCCTCTTTTTTTCATATGA+GGG - chr6_3:39196619-39196638 None:intergenic 25.0%
!! CATTTAACTTCTAAATCTCA+AGG - chr6_3:39196713-39196732 None:intergenic 25.0%
! CAAATTCATTCAATCTTTCA+TGG - chr6_3:39196859-39196878 None:intergenic 25.0%
! CATGAAAGATTGAATGAATT+TGG + chr6_3:39196857-39196876 Msa0950570:intron 25.0%
!!! AAATGTTGATTTTTAGAGAG+AGG + chr6_3:39196936-39196955 Msa0950570:intron 25.0%
!!! TATGATGAATTCTTTTTGGT+GGG - chr6_3:39197123-39197142 None:intergenic 25.0%
!! ATATGATGAATTCTTTTTGG+TGG - chr6_3:39197124-39197143 None:intergenic 25.0%
!!! TTTTAGAAATATAGGTCTTC+TGG + chr6_3:39197420-39197439 Msa0950570:intron 25.0%
!! AGAAATTGTCTGAAATTGTT+TGG - chr6_3:39197614-39197633 None:intergenic 25.0%
! AACAATTTCAGACAATTTCT+CGG + chr6_3:39197614-39197633 Msa0950570:CDS 25.0%
!!! ACATTAAAAGTGTCAACAAA+GGG - chr6_3:39197746-39197765 None:intergenic 25.0%
!!! CACTTTTAATGTCATTTCAT+TGG + chr6_3:39197754-39197773 Msa0950570:intron 25.0%
! TAGTATGAGAATGTATTGAA+TGG + chr6_3:39197974-39197993 Msa0950570:intron 25.0%
! CTATCCTTAGTTGTATAAAT+AGG - chr6_3:39198036-39198055 None:intergenic 25.0%
! CATTGTAGTGCATTTATATT+CGG + chr6_3:39198120-39198139 Msa0950570:intron 25.0%
!! GAAAATTATGTGTTCTAGAT+TGG - chr6_3:39198226-39198245 None:intergenic 25.0%
!! GACTTATTTGAGATAAGTTT+AGG - chr6_3:39198552-39198571 None:intergenic 25.0%
! ATATTTATCTCACTACAGAA+CGG + chr6_3:39198619-39198638 Msa0950570:intron 25.0%
! AAACATTATGCTCATGTATA+AGG - chr6_3:39198930-39198949 None:intergenic 25.0%
! ATTTCTCTTATAAATAGGAC+CGG - chr6_3:39199025-39199044 None:intergenic 25.0%
TGAAATTTATGAAGTGGAGA+TGG - chr6_3:39191072-39191091 None:intergenic 30.0%
TACTTCATGAGAAGGATTAA+TGG - chr6_3:39191118-39191137 None:intergenic 30.0%
GGTAAAAATACTTCATGAGA+AGG - chr6_3:39191126-39191145 None:intergenic 30.0%
GTGGTTAATTTATTTAGCCA+CGG - chr6_3:39191147-39191166 None:intergenic 30.0%
TAAATTAACCACTGCAAAAG+TGG + chr6_3:39191155-39191174 Msa0950570:CDS 30.0%
CATCTATAGCATCAAAAATG+GGG - chr6_3:39191188-39191207 None:intergenic 30.0%
GTCATCTATAGCATCAAAAA+TGG - chr6_3:39191190-39191209 None:intergenic 30.0%
GATCAAAAGAGCAAAACAAT+TGG + chr6_3:39191290-39191309 Msa0950570:CDS 30.0%
CATCATTAAAAAAGGGGAAA+AGG + chr6_3:39191692-39191711 Msa0950570:intron 30.0%
TCATTAAAAAAGGGGAAAAG+GGG + chr6_3:39191694-39191713 Msa0950570:intron 30.0%
ATCGCTCAAAAAAAAAGAAG+AGG + chr6_3:39191735-39191754 Msa0950570:intron 30.0%
TCGCTCAAAAAAAAAGAAGA+GGG + chr6_3:39191736-39191755 Msa0950570:intron 30.0%
TGCACAATTAGCAAAAAGAT+AGG + chr6_3:39191769-39191788 Msa0950570:intron 30.0%
GCACAATTAGCAAAAAGATA+GGG + chr6_3:39191770-39191789 Msa0950570:intron 30.0%
CACAATTAGCAAAAAGATAG+GGG + chr6_3:39191771-39191790 Msa0950570:intron 30.0%
ACAATTAGCAAAAAGATAGG+GGG + chr6_3:39191772-39191791 Msa0950570:intron 30.0%
CAAAATCGCTCAAAAAAAAG+AGG + chr6_3:39191858-39191877 Msa0950570:intron 30.0%
! TACATGCTCTTGTTATCTAT+TGG + chr6_3:39192086-39192105 Msa0950570:intron 30.0%
!! ATATCTACCGACTTGTATTA+TGG - chr6_3:39192130-39192149 None:intergenic 30.0%
GAAAAGTAAGTTAACGTGTT+TGG + chr6_3:39192435-39192454 Msa0950570:intron 30.0%
AACGTGTTTGGTCTAATAAT+TGG + chr6_3:39192447-39192466 Msa0950570:intron 30.0%
AGTAAACTCAATCTTTGAGT+TGG + chr6_3:39192630-39192649 Msa0950570:intron 30.0%
! TAAACTTAGTGTTGAAGATC+TGG + chr6_3:39192653-39192672 Msa0950570:intron 30.0%
ATTTCGTGATATCAAAATGG+CGG + chr6_3:39192701-39192720 Msa0950570:intron 30.0%
! AAAAGCACGATCAATAACTT+CGG + chr6_3:39193122-39193141 Msa0950570:intron 30.0%
!!! CTTGACAAAGTTTTAGATTG+CGG + chr6_3:39193163-39193182 Msa0950570:intron 30.0%
! TTAATTTGGAGAATGTGTAG+AGG - chr6_3:39193413-39193432 None:intergenic 30.0%
ATTAAATTATTGACCTTCGG+AGG + chr6_3:39193428-39193447 Msa0950570:intron 30.0%
!! TTTTGAAAGCGGAAAGAAAT+GGG - chr6_3:39193560-39193579 None:intergenic 30.0%
!! ATTTTGAAAGCGGAAAGAAA+TGG - chr6_3:39193561-39193580 None:intergenic 30.0%
AGATTTGACTGCTTTCAATT+TGG - chr6_3:39194002-39194021 None:intergenic 30.0%
TTGTCTATGCACAAGAAATA+TGG - chr6_3:39194040-39194059 None:intergenic 30.0%
! AAATTTAGTATGGGTGTTAC+AGG - chr6_3:39194111-39194130 None:intergenic 30.0%
ATGTGCGTTAAACTTAGTAT+TGG + chr6_3:39194147-39194166 Msa0950570:intron 30.0%
ATGATAGAACAGTATAAACC+CGG - chr6_3:39194472-39194491 None:intergenic 30.0%
ATTCTGATACTAACCTATTC+AGG + chr6_3:39195017-39195036 Msa0950570:intron 30.0%
TGTCATATGTCATTCCTAAA+AGG + chr6_3:39195055-39195074 Msa0950570:intron 30.0%
!!! TAGTCGATGTTAGTTTTATC+AGG - chr6_3:39195100-39195119 None:intergenic 30.0%
!!! GTTCCTTATTTTCCAAACTT+TGG + chr6_3:39195145-39195164 Msa0950570:intron 30.0%
TAGCCATGAAAGTAATTCAT+GGG - chr6_3:39195178-39195197 None:intergenic 30.0%
TTAGCCATGAAAGTAATTCA+TGG - chr6_3:39195179-39195198 None:intergenic 30.0%
ATTATGCAATTCTCCAACTT+AGG - chr6_3:39195253-39195272 None:intergenic 30.0%
TTTATATTCTAGCCAAGCAA+TGG + chr6_3:39195392-39195411 Msa0950570:intron 30.0%
ACATAAATATAGCCATTGCT+TGG - chr6_3:39195407-39195426 None:intergenic 30.0%
TTAGAATTTAACACTTGCCT+TGG - chr6_3:39195481-39195500 None:intergenic 30.0%
TTTATGTTAGTGTAGACGTT+GGG - chr6_3:39195562-39195581 None:intergenic 30.0%
!! AAGTTGTGGTTAAGTTGTTT+TGG - chr6_3:39195952-39195971 None:intergenic 30.0%
AACAACTTAACCACAACTTA+TGG + chr6_3:39195953-39195972 Msa0950570:intron 30.0%
! GTTGAAGTTTGGAATGAATT+CGG - chr6_3:39195991-39196010 None:intergenic 30.0%
AATCTGCAGAAAAAGCTATA+CGG - chr6_3:39196107-39196126 None:intergenic 30.0%
TCAGAAAATGCATTAGAAGT+TGG - chr6_3:39196144-39196163 None:intergenic 30.0%
ATGCTAAATTCCCTTCAATT+TGG - chr6_3:39196202-39196221 None:intergenic 30.0%
CCCAATAATTACTTAATTCC+AGG + chr6_3:39196234-39196253 Msa0950570:intron 30.0%
! TATATGTGATGTTTTCGTCA+CGG - chr6_3:39196274-39196293 None:intergenic 30.0%
GTGGTTATAAGTGACTAAAT+TGG - chr6_3:39196331-39196350 None:intergenic 30.0%
TGGATGGAAATTATAGACTT+GGG - chr6_3:39196427-39196446 None:intergenic 30.0%
ATGGATGGAAATTATAGACT+TGG - chr6_3:39196428-39196447 None:intergenic 30.0%
!! TTGAATTTTTGGAGAATGGA+TGG - chr6_3:39196443-39196462 None:intergenic 30.0%
!! AGTGATTTGTTTGATGCATA+AGG - chr6_3:39196505-39196524 None:intergenic 30.0%
TTAGGAATGCAATTATGTTG+TGG - chr6_3:39196538-39196557 None:intergenic 30.0%
ATTCAACAAAGTGACATTAG+AGG + chr6_3:39196574-39196593 Msa0950570:intron 30.0%
AACCCTCATATGAAAAAAAG+AGG + chr6_3:39196614-39196633 Msa0950570:intron 30.0%
!!! CTTCCTCTTTTTTTCATATG+AGG - chr6_3:39196620-39196639 None:intergenic 30.0%
!! CAATATCTAAGCTTGCTTTT+TGG - chr6_3:39196686-39196705 None:intergenic 30.0%
CAAAAAGCAAGCTTAGATAT+TGG + chr6_3:39196684-39196703 Msa0950570:intron 30.0%
TGAAGAATTGGAAAAATGAG+AGG + chr6_3:39196731-39196750 Msa0950570:intron 30.0%
!!! AAGGTGTGATTTTTGAAACT+TGG + chr6_3:39196781-39196800 Msa0950570:intron 30.0%
AATCATGCATATGAGTTCTT+AGG - chr6_3:39196824-39196843 None:intergenic 30.0%
GAAAGATTGAATGAATTTGG+AGG + chr6_3:39196860-39196879 Msa0950570:intron 30.0%
ATTGAATGAATTTGGAGGTT+GGG + chr6_3:39196865-39196884 Msa0950570:intron 30.0%
!!! TTTTTTAGCAAGGGGTAAAA+GGG - chr6_3:39197028-39197047 None:intergenic 30.0%
!!! TTTTTTTAGCAAGGGGTAAA+AGG - chr6_3:39197029-39197048 None:intergenic 30.0%
!!! CATGAGATTTTTTTAGCAAG+GGG - chr6_3:39197036-39197055 None:intergenic 30.0%
!!! CCATGAGATTTTTTTAGCAA+GGG - chr6_3:39197037-39197056 None:intergenic 30.0%
!!! TCCATGAGATTTTTTTAGCA+AGG - chr6_3:39197038-39197057 None:intergenic 30.0%
! TAAATGACAGTGTTGTTAAG+CGG + chr6_3:39197083-39197102 Msa0950570:intron 30.0%
!! ATGATGAATTCTTTTTGGTG+GGG - chr6_3:39197122-39197141 None:intergenic 30.0%
AATGGTAGAGATGATTGAAT+TGG + chr6_3:39197148-39197167 Msa0950570:intron 30.0%
ATGGTAGAGATGATTGAATT+GGG + chr6_3:39197149-39197168 Msa0950570:intron 30.0%
TTACTACAGTCTACAAAAGA+AGG - chr6_3:39197239-39197258 None:intergenic 30.0%
TCATCATTGAATAGCACAAA+AGG + chr6_3:39197453-39197472 Msa0950570:CDS 30.0%
AATAGCACAAAAGGACTTAT+GGG + chr6_3:39197462-39197481 Msa0950570:CDS 30.0%
CCTCATATGAACATAAACAA+TGG - chr6_3:39197708-39197727 None:intergenic 30.0%
CCATTGTTTATGTTCATATG+AGG + chr6_3:39197705-39197724 Msa0950570:intron 30.0%
!! GACATTAAAAGTGTCAACAA+AGG - chr6_3:39197747-39197766 None:intergenic 30.0%
! TATCTCTAGGGAGAAAAATT+AGG + chr6_3:39197792-39197811 Msa0950570:intron 30.0%
TTTCTTTGATATGTCTCCAT+AGG + chr6_3:39197820-39197839 Msa0950570:intron 30.0%
! ATGGATTAAAGGGAATCATA+GGG - chr6_3:39197859-39197878 None:intergenic 30.0%
! TATGGATTAAAGGGAATCAT+AGG - chr6_3:39197860-39197879 None:intergenic 30.0%
! CCATGTCATTATGGATTAAA+GGG - chr6_3:39197869-39197888 None:intergenic 30.0%
CCTTTAATCCATAATGACAT+GGG + chr6_3:39197867-39197886 Msa0950570:intron 30.0%
CTTTAATCCATAATGACATG+GGG + chr6_3:39197868-39197887 Msa0950570:intron 30.0%
TAGTTGTATAAATAGGTCCT+AGG - chr6_3:39198029-39198048 None:intergenic 30.0%
AGGACCTATTTATACAACTA+AGG + chr6_3:39198029-39198048 Msa0950570:intron 30.0%
TGTGATAAATCTTCTGTGTT+CGG + chr6_3:39198169-39198188 Msa0950570:intron 30.0%
! TGCATTTTCTTAAGTGCTTT+TGG - chr6_3:39198298-39198317 None:intergenic 30.0%
CACTTAAGAAAATGCACATA+AGG + chr6_3:39198302-39198321 Msa0950570:intron 30.0%
! ATTTGAGATAAGTTTAGGGA+AGG - chr6_3:39198547-39198566 None:intergenic 30.0%
TACCTATCTACATTTGTGTA+TGG + chr6_3:39198659-39198678 Msa0950570:CDS 30.0%
TTCCATACACAAATGTAGAT+AGG - chr6_3:39198664-39198683 None:intergenic 30.0%
! GTGTATGGAATAAACTCTTT+TGG + chr6_3:39198674-39198693 Msa0950570:CDS 30.0%
!! TTTGGTTTGTTGCTTTATTC+TGG + chr6_3:39198692-39198711 Msa0950570:CDS 30.0%
GAAAACTGAAAGCAAAATCA+TGG + chr6_3:39198760-39198779 Msa0950570:CDS 30.0%
!!! CTACATGTTGGTTTTCTAAT+AGG + chr6_3:39198892-39198911 Msa0950570:three_prime_UTR 30.0%
!! CTCATGAAGTATTTTTACCG+TGG + chr6_3:39191127-39191146 Msa0950570:CDS 35.0%
GAACAACACTGATAGTTACT+TGG - chr6_3:39191224-39191243 None:intergenic 35.0%
GGGAAATAAGAAAACAGCAA+TGG - chr6_3:39191256-39191275 None:intergenic 35.0%
AGACGATCAATTCCGTAAAA+TGG - chr6_3:39191613-39191632 None:intergenic 35.0%
! GATTTTGGACAAGACACAAT+TGG - chr6_3:39191673-39191692 None:intergenic 35.0%
CGCTCAAAAAAAAAGAAGAG+GGG + chr6_3:39191737-39191756 Msa0950570:intron 35.0%
GCTCAAAAAAAAAGAAGAGG+GGG + chr6_3:39191738-39191757 Msa0950570:intron 35.0%
AATCGCTCAAAAAAAAGAGG+AGG + chr6_3:39191861-39191880 Msa0950570:intron 35.0%
TCGCACAATTAGCAAAAGAT+AGG + chr6_3:39191891-39191910 Msa0950570:intron 35.0%
CGCACAATTAGCAAAAGATA+GGG + chr6_3:39191892-39191911 Msa0950570:intron 35.0%
GCACAATTAGCAAAAGATAG+GGG + chr6_3:39191893-39191912 Msa0950570:intron 35.0%
CACAATTAGCAAAAGATAGG+GGG + chr6_3:39191894-39191913 Msa0950570:intron 35.0%
! CCAAATAAAAGAGCATGTGT+TGG - chr6_3:39192034-39192053 None:intergenic 35.0%
! CCAACACATGCTCTTTTATT+TGG + chr6_3:39192031-39192050 Msa0950570:intron 35.0%
ACCTTTGCCATAATACAAGT+CGG + chr6_3:39192120-39192139 Msa0950570:intron 35.0%
ACAAACAACTAAGTTTCGGT+TGG + chr6_3:39192320-39192339 Msa0950570:intron 35.0%
CAAACAACTAAGTTTCGGTT+GGG + chr6_3:39192321-39192340 Msa0950570:intron 35.0%
CAGAGTTCAAAGCATGATTA+TGG + chr6_3:39192355-39192374 Msa0950570:intron 35.0%
!! ATAGTGGGACTAGCTAATAA+TGG + chr6_3:39192563-39192582 Msa0950570:intron 35.0%
!! CTTTATGCTCTAGAATGGTT+GGG - chr6_3:39192793-39192812 None:intergenic 35.0%
TGTCCTATTCCAATTCTAGT+GGG - chr6_3:39192822-39192841 None:intergenic 35.0%
! GCATATGTATCTGATGATGA+AGG - chr6_3:39192885-39192904 None:intergenic 35.0%
ATTGATCCAAAAAAGTGGCA+TGG + chr6_3:39192923-39192942 Msa0950570:intron 35.0%
!!! AAATGTCCATGCCACTTTTT+TGG - chr6_3:39192932-39192951 None:intergenic 35.0%
AACTTTGTTGGCAAAATCCT+CGG - chr6_3:39192972-39192991 None:intergenic 35.0%
AATAACTTCGGCTACTGTTT+CGG + chr6_3:39193134-39193153 Msa0950570:intron 35.0%
AAAAATTTGCAGCTCTCTTG+TGG - chr6_3:39193203-39193222 None:intergenic 35.0%
! ACAAGAGAGCTGCAAATTTT+TGG + chr6_3:39193202-39193221 Msa0950570:intron 35.0%
! CAAGAGAGCTGCAAATTTTT+GGG + chr6_3:39193203-39193222 Msa0950570:intron 35.0%
GTTATTGGGATGGTATATTG+AGG - chr6_3:39193463-39193482 None:intergenic 35.0%
TCTTCGCAAACTAGGTTATT+GGG - chr6_3:39193477-39193496 None:intergenic 35.0%
ATCTTCGCAAACTAGGTTAT+TGG - chr6_3:39193478-39193497 None:intergenic 35.0%
! AATAACCTAGTTTGCGAAGA+TGG + chr6_3:39193477-39193496 Msa0950570:intron 35.0%
! ATAACCTAGTTTGCGAAGAT+GGG + chr6_3:39193478-39193497 Msa0950570:intron 35.0%
AACTTATCATTCTCCACATG+AGG + chr6_3:39193582-39193601 Msa0950570:intron 35.0%
!!! GTATTGCTGATTCCATTTTG+TGG - chr6_3:39193620-39193639 None:intergenic 35.0%
ATGGAATCAGCAATACCAAT+AGG + chr6_3:39193624-39193643 Msa0950570:intron 35.0%
TTGATTCCACTCTTTCGAAA+AGG + chr6_3:39193668-39193687 Msa0950570:intron 35.0%
TGATTCCACTCTTTCGAAAA+GGG + chr6_3:39193669-39193688 Msa0950570:intron 35.0%
AGAATTGATCCAAACATTCC+CGG - chr6_3:39193738-39193757 None:intergenic 35.0%
TGGATCAATTCTTTCTCCAT+TGG + chr6_3:39193746-39193765 Msa0950570:intron 35.0%
AAAGCAAGATTTCTTGTTCG+AGG - chr6_3:39193833-39193852 None:intergenic 35.0%
GAACAAGAAATCTTGCTTTG+AGG + chr6_3:39193834-39193853 Msa0950570:intron 35.0%
AATACATTGCCTCGAAAATG+CGG + chr6_3:39193921-39193940 Msa0950570:intron 35.0%
CTATGCACAAGAAATATGGT+GGG - chr6_3:39194036-39194055 None:intergenic 35.0%
TCTATGCACAAGAAATATGG+TGG - chr6_3:39194037-39194056 None:intergenic 35.0%
!! TTTTATTTCAGATTCGCAGG+TGG - chr6_3:39194340-39194359 None:intergenic 35.0%
TCTCTAAACTTAACCCATTC+CGG + chr6_3:39194450-39194469 Msa0950570:intron 35.0%
! TGATTTTACGGAATAAACCC+AGG + chr6_3:39194640-39194659 Msa0950570:intron 35.0%
! TACTAACCTATTCAGGTTCT+AGG + chr6_3:39195024-39195043 Msa0950570:intron 35.0%
ATGGGTAGATTTCCAAAGTT+TGG - chr6_3:39195160-39195179 None:intergenic 35.0%
CTACCCATGAATTACTTTCA+TGG + chr6_3:39195172-39195191 Msa0950570:intron 35.0%
ATATGTAATGGCACCTAAGT+TGG + chr6_3:39195237-39195256 Msa0950570:intron 35.0%
GTTTATGTTACCATCCATGT+TGG + chr6_3:39195322-39195341 Msa0950570:intron 35.0%
! GAGGATCCTAGAAACAATTT+TGG + chr6_3:39195344-39195363 Msa0950570:intron 35.0%
! ATGTGGCCAAAATTGTTTCT+AGG - chr6_3:39195353-39195372 None:intergenic 35.0%
!! GTAACCAATTTTGGTAACCA+AGG + chr6_3:39195461-39195480 Msa0950570:intron 35.0%
TTATGTTAGTGTAGACGTTG+GGG - chr6_3:39195561-39195580 None:intergenic 35.0%
GTTTATGTTAGTGTAGACGT+TGG - chr6_3:39195563-39195582 None:intergenic 35.0%
AAATTCTATCCTCCAACCTT+AGG + chr6_3:39195684-39195703 Msa0950570:intron 35.0%
TGGTATAGTTTACTACCCAA+AGG + chr6_3:39195825-39195844 Msa0950570:intron 35.0%
TATAGTTTACTACCCAAAGG+TGG + chr6_3:39195828-39195847 Msa0950570:intron 35.0%
ATAGTTTACTACCCAAAGGT+GGG + chr6_3:39195829-39195848 Msa0950570:intron 35.0%
TAGTTAGAAAACCCACCTTT+GGG - chr6_3:39195843-39195862 None:intergenic 35.0%
TTAGTTAGAAAACCCACCTT+TGG - chr6_3:39195844-39195863 None:intergenic 35.0%
!! AAGGTGGGTTTTCTAACTAA+AGG + chr6_3:39195844-39195863 Msa0950570:intron 35.0%
!!! GTTTTGGAGAAAAGTGCTTA+TGG - chr6_3:39195936-39195955 None:intergenic 35.0%
GAAAGTTGTTCATAGGTGTT+TGG - chr6_3:39196022-39196041 None:intergenic 35.0%
AACACCTATGAACAACTTTC+AGG + chr6_3:39196022-39196041 Msa0950570:intron 35.0%
ATGACCTGAAAGTTGTTCAT+AGG - chr6_3:39196029-39196048 None:intergenic 35.0%
AGAAAAAGCTATACGGGTTT+GGG - chr6_3:39196100-39196119 None:intergenic 35.0%
ATCTGCAGAAAAAGCTATAC+GGG - chr6_3:39196106-39196125 None:intergenic 35.0%
! ATATGTGATGTTTTCGTCAC+GGG - chr6_3:39196273-39196292 None:intergenic 35.0%
TCACTTATAACCACATCTAG+CGG + chr6_3:39196337-39196356 Msa0950570:intron 35.0%
GAGCTATGGAATCATATTCA+AGG - chr6_3:39196483-39196502 None:intergenic 35.0%
CAATTATGTTGTGGTGATTG+TGG - chr6_3:39196529-39196548 None:intergenic 35.0%
CCATGTGTGGAATAATAACT+AGG - chr6_3:39196658-39196677 None:intergenic 35.0%
CCTAGTTATTATTCCACACA+TGG + chr6_3:39196655-39196674 Msa0950570:intron 35.0%
AATTGGAAAAATGAGAGGAG+AGG + chr6_3:39196736-39196755 Msa0950570:intron 35.0%
ATTGGAAAAATGAGAGGAGA+GGG + chr6_3:39196737-39196756 Msa0950570:intron 35.0%
GATTGAGCTAAATGGAGAAA+AGG + chr6_3:39196762-39196781 Msa0950570:intron 35.0%
GATTGAATGAATTTGGAGGT+TGG + chr6_3:39196864-39196883 Msa0950570:intron 35.0%
CCCTTGCTAAAAAAATCTCA+TGG + chr6_3:39197034-39197053 Msa0950570:intron 35.0%
! AAATGACAGTGTTGTTAAGC+GGG + chr6_3:39197084-39197103 Msa0950570:intron 35.0%
!! TGATGAATTCTTTTTGGTGG+GGG - chr6_3:39197121-39197140 None:intergenic 35.0%
TAGAGATGATTGAATTGGGT+AGG + chr6_3:39197153-39197172 Msa0950570:intron 35.0%
ACAGTCTACAAAAGAAGGTA+GGG - chr6_3:39197234-39197253 None:intergenic 35.0%
TACAGTCTACAAAAGAAGGT+AGG - chr6_3:39197235-39197254 None:intergenic 35.0%
GAATAGCACAAAAGGACTTA+TGG + chr6_3:39197461-39197480 Msa0950570:CDS 35.0%
AACAATGCTTTATCTGGTGA+AGG - chr6_3:39197516-39197535 None:intergenic 35.0%
!! TCACCAGATAAAGCATTGTT+AGG + chr6_3:39197516-39197535 Msa0950570:CDS 35.0%
AACAAAGGGTTATGGACTTA+TGG - chr6_3:39197732-39197751 None:intergenic 35.0%
! AAAGTGTCAACAAAGGGTTA+TGG - chr6_3:39197740-39197759 None:intergenic 35.0%
GGGAGTTAAGTTAAAACCTA+TGG - chr6_3:39197839-39197858 None:intergenic 35.0%
CCCTTTAATCCATAATGACA+TGG + chr6_3:39197866-39197885 Msa0950570:intron 35.0%
! CCCATGTCATTATGGATTAA+AGG - chr6_3:39197870-39197889 None:intergenic 35.0%
!! TCTTGATGGAATGTTGATTC+AGG - chr6_3:39197914-39197933 None:intergenic 35.0%
ACAACTAAGGATAGAGTTGT+TGG + chr6_3:39198042-39198061 Msa0950570:intron 35.0%
GTGATAAATCTTCTGTGTTC+GGG + chr6_3:39198170-39198189 Msa0950570:intron 35.0%
! CTTAGCATATAGGGAGTTTT+GGG + chr6_3:39198193-39198212 Msa0950570:intron 35.0%
TGAATGTCTTATGCTTTCTC+AGG + chr6_3:39198493-39198512 Msa0950570:intron 35.0%
ACCTTATGGTGATTGTTATC+TGG - chr6_3:39198523-39198542 None:intergenic 35.0%
CACTACAGAACGGTAATAAA+TGG + chr6_3:39198629-39198648 Msa0950570:intron 35.0%
! ACTTGATGATCCTTTCTCAT+AGG - chr6_3:39198735-39198754 None:intergenic 35.0%
TATGAGAAAGGATCATCAAG+TGG + chr6_3:39198734-39198753 Msa0950570:CDS 35.0%
TATTAACACAATACTCCCTC+CGG + chr6_3:39199003-39199022 Msa0950570:three_prime_UTR 35.0%
! GTAAGTGAGAGTGCAACATT+TGG - chr6_3:39190984-39191003 None:intergenic 40.0%
GGAGGTTTGTGAAGAGAAAT+TGG - chr6_3:39191017-39191036 None:intergenic 40.0%
!! GGTGGGTTGTTAAGGAAATT+GGG - chr6_3:39191038-39191057 None:intergenic 40.0%
!! TGGTGGGTTGTTAAGGAAAT+TGG - chr6_3:39191039-39191058 None:intergenic 40.0%
!! AGAAAAGTGGTGGGTTGTTA+AGG - chr6_3:39191046-39191065 None:intergenic 40.0%
AGATGGTGAAGAAAAGTGGT+GGG - chr6_3:39191055-39191074 None:intergenic 40.0%
!! GCTTAATTCCACTTTTGCAG+TGG - chr6_3:39191166-39191185 None:intergenic 40.0%
GACACAATTGGCAAAAGATG+TGG - chr6_3:39191661-39191680 None:intergenic 40.0%
AGCACAATTGAACACAACGA+TGG + chr6_3:39191799-39191818 Msa0950570:intron 40.0%
GCACAATTGAACACAACGAT+GGG + chr6_3:39191800-39191819 Msa0950570:intron 40.0%
CACAATTGAACACAACGATG+GGG + chr6_3:39191801-39191820 Msa0950570:intron 40.0%
ATGGGGTGCAAAATCAGAAA+GGG + chr6_3:39191818-39191837 Msa0950570:intron 40.0%
!! ACCGACTTGTATTATGGCAA+AGG - chr6_3:39192124-39192143 None:intergenic 40.0%
TAAATGGTGAGCTGCTTCAT+TGG + chr6_3:39192597-39192616 Msa0950570:intron 40.0%
! ACTTAGTGTTGAAGATCTGG+CGG + chr6_3:39192656-39192675 Msa0950570:intron 40.0%
TGATATCACGAAATTTGGCC+AGG - chr6_3:39192695-39192714 None:intergenic 40.0%
CTAGAATGGTTGGGTTACAT+GGG - chr6_3:39192784-39192803 None:intergenic 40.0%
! TCTAGAATGGTTGGGTTACA+TGG - chr6_3:39192785-39192804 None:intergenic 40.0%
!! CCTTTATGCTCTAGAATGGT+TGG - chr6_3:39192794-39192813 None:intergenic 40.0%
!! CCAACCATTCTAGAGCATAA+AGG + chr6_3:39192791-39192810 Msa0950570:intron 40.0%
!! GTAGCCTTTATGCTCTAGAA+TGG - chr6_3:39192798-39192817 None:intergenic 40.0%
TCCTATTCCAATTCTAGTGG+GGG - chr6_3:39192820-39192839 None:intergenic 40.0%
GTCCTATTCCAATTCTAGTG+GGG - chr6_3:39192821-39192840 None:intergenic 40.0%
GTGTCCTATTCCAATTCTAG+TGG - chr6_3:39192823-39192842 None:intergenic 40.0%
AGAATTGGAATAGGACACAC+AGG + chr6_3:39192825-39192844 Msa0950570:intron 40.0%
GAATTGGAATAGGACACACA+GGG + chr6_3:39192826-39192845 Msa0950570:intron 40.0%
AATTGGAATAGGACACACAG+GGG + chr6_3:39192827-39192846 Msa0950570:intron 40.0%
TGCCAACAAAGTTCAGTTGT+AGG + chr6_3:39192979-39192998 Msa0950570:intron 40.0%
CTCCTACAACTGAACTTTGT+TGG - chr6_3:39192984-39193003 None:intergenic 40.0%
ACAAAGTTCAGTTGTAGGAG+AGG + chr6_3:39192984-39193003 Msa0950570:intron 40.0%
! AATTACCTCGCGACAGTTTT+TGG + chr6_3:39193226-39193245 Msa0950570:intron 40.0%
GGACTTGGAGACATCATTAA+TGG - chr6_3:39193300-39193319 None:intergenic 40.0%
! CAGGTGTTCTTTTTCTATGC+AGG - chr6_3:39193337-39193356 None:intergenic 40.0%
GCATAGAAAAAGAACACCTG+TGG + chr6_3:39193337-39193356 Msa0950570:intron 40.0%
TAGAAAAAGAACACCTGTGG+TGG + chr6_3:39193340-39193359 Msa0950570:intron 40.0%
AGAAAAAGAACACCTGTGGT+GGG + chr6_3:39193341-39193360 Msa0950570:intron 40.0%
ATTTCCCATCTTCGCAAACT+AGG - chr6_3:39193485-39193504 None:intergenic 40.0%
CAAAAGAGGAGTCCACAAAA+TGG + chr6_3:39193605-39193624 Msa0950570:intron 40.0%
GATTCCACTCTTTCGAAAAG+GGG + chr6_3:39193670-39193689 Msa0950570:intron 40.0%
GCAATTTCTCGAGAACTTCT+CGG - chr6_3:39193712-39193731 None:intergenic 40.0%
GTTCTCGAGAAATTGCAATC+CGG + chr6_3:39193716-39193735 Msa0950570:intron 40.0%
TTCTCGAGAAATTGCAATCC+GGG + chr6_3:39193717-39193736 Msa0950570:intron 40.0%
AATTGCAATCCGGGAATGTT+TGG + chr6_3:39193726-39193745 Msa0950570:intron 40.0%
ATCTTGTTCTCAATGAACCG+TGG - chr6_3:39193776-39193795 None:intergenic 40.0%
AAGATTTCTTGTTCGAGGTG+GGG - chr6_3:39193828-39193847 None:intergenic 40.0%
CAAGATTTCTTGTTCGAGGT+GGG - chr6_3:39193829-39193848 None:intergenic 40.0%
AACCCAAGTTATGTTTGGAG+GGG - chr6_3:39193863-39193882 None:intergenic 40.0%
CAACCCAAGTTATGTTTGGA+GGG - chr6_3:39193864-39193883 None:intergenic 40.0%
ACAACCCAAGTTATGTTTGG+AGG - chr6_3:39193865-39193884 None:intergenic 40.0%
! TCCAAACATAACTTGGGTTG+TGG + chr6_3:39193864-39193883 Msa0950570:intron 40.0%
! AGTTTTCTTTCAGCCAGTGT+GGG - chr6_3:39193890-39193909 None:intergenic 40.0%
! TAGTTTTCTTTCAGCCAGTG+TGG - chr6_3:39193891-39193910 None:intergenic 40.0%
CTGAAAGAAAACTACGCGTA+GGG + chr6_3:39193897-39193916 Msa0950570:intron 40.0%
ATACATTGCCTCGAAAATGC+GGG + chr6_3:39193922-39193941 Msa0950570:intron 40.0%
TGGAAAATCCTTACGAAACC+GGG - chr6_3:39193959-39193978 None:intergenic 40.0%
CTGGAAAATCCTTACGAAAC+CGG - chr6_3:39193960-39193979 None:intergenic 40.0%
GCTTTCAATTTGGCGATGTT+AGG - chr6_3:39193992-39194011 None:intergenic 40.0%
GGGTTAAGTTTAGAGACAGA+TGG - chr6_3:39194446-39194465 None:intergenic 40.0%
CTCTAAACTTAACCCATTCC+GGG + chr6_3:39194451-39194470 Msa0950570:intron 40.0%
GAACAGTATAAACCCGGAAT+GGG - chr6_3:39194466-39194485 None:intergenic 40.0%
AGAACAGTATAAACCCGGAA+TGG - chr6_3:39194467-39194486 None:intergenic 40.0%
ATCATGCATAACTGAGCGAT+CGG + chr6_3:39194487-39194506 Msa0950570:intron 40.0%
! TTTTACGGAATAAACCCAGG+TGG + chr6_3:39194643-39194662 Msa0950570:intron 40.0%
TCAGAGTGGAATAAATTCCG+GGG - chr6_3:39194674-39194693 None:intergenic 40.0%
GTCAGAGTGGAATAAATTCC+GGG - chr6_3:39194675-39194694 None:intergenic 40.0%
GGTCAGAGTGGAATAAATTC+CGG - chr6_3:39194676-39194695 None:intergenic 40.0%
GGAATTTATTCCACTCTGAC+CGG + chr6_3:39194675-39194694 Msa0950570:intron 40.0%
GAAATTAATACCGGTCAGAG+TGG - chr6_3:39194688-39194707 None:intergenic 40.0%
GACCGGTATTAATTTCCAAC+TGG + chr6_3:39194692-39194711 Msa0950570:intron 40.0%
CGCCAGTTGGAAATTAATAC+CGG - chr6_3:39194697-39194716 None:intergenic 40.0%
GATATGCCTAGAACCTGAAT+AGG - chr6_3:39195033-39195052 None:intergenic 40.0%
TATGTTACCATCCATGTTGG+AGG + chr6_3:39195325-39195344 Msa0950570:intron 40.0%
CTTGCCTTGGTTACCAAAAT+TGG - chr6_3:39195468-39195487 None:intergenic 40.0%
TATGTTAGTGTAGACGTTGG+GGG - chr6_3:39195560-39195579 None:intergenic 40.0%
TACCACTTTAGTCCTAAGGT+TGG - chr6_3:39195699-39195718 None:intergenic 40.0%
GCAATACCACTTTAGTCCTA+AGG - chr6_3:39195703-39195722 None:intergenic 40.0%
TCATAGGTGTTTGGTTGTGT+CGG - chr6_3:39196013-39196032 None:intergenic 40.0%
CAGAAAAAGCTATACGGGTT+TGG - chr6_3:39196101-39196120 None:intergenic 40.0%
TGTGAATTAACCGCTAGATG+TGG - chr6_3:39196350-39196369 None:intergenic 40.0%
GTTTGATGCATAAGGAGCTA+TGG - chr6_3:39196497-39196516 None:intergenic 40.0%
CAAAGTGACATTAGAGGTGA+TGG + chr6_3:39196580-39196599 Msa0950570:intron 40.0%
TTGGAAAAATGAGAGGAGAG+GGG + chr6_3:39196738-39196757 Msa0950570:intron 40.0%
TGCATATGAGTTCTTAGGAG+TGG - chr6_3:39196819-39196838 None:intergenic 40.0%
AATTTGGAGGTTGGGATTCA+TGG + chr6_3:39196873-39196892 Msa0950570:intron 40.0%
AATGCTTTATCTGGTGAAGG+TGG - chr6_3:39197513-39197532 None:intergenic 40.0%
GCTCCTAACAATGCTTTATC+TGG - chr6_3:39197522-39197541 None:intergenic 40.0%
AGCATTGTTAGGAGCAGTTA+TGG + chr6_3:39197527-39197546 Msa0950570:CDS 40.0%
ATGATCACCCCATGTCATTA+TGG - chr6_3:39197878-39197897 None:intergenic 40.0%
ATTCCATCAAGATGCGAGTT+GGG + chr6_3:39197922-39197941 Msa0950570:intron 40.0%
AGTTGTGTACCTTTGTGTTG+TGG + chr6_3:39198002-39198021 Msa0950570:intron 40.0%
GATTTCGACATTGATACCCA+CGG - chr6_3:39198094-39198113 None:intergenic 40.0%
GTGGGTATCAATGTCGAAAT+CGG + chr6_3:39198093-39198112 Msa0950570:intron 40.0%
AAGCAAAAGCTTGACACGAT+TGG + chr6_3:39198143-39198162 Msa0950570:intron 40.0%
! GCTTAGCATATAGGGAGTTT+TGG + chr6_3:39198192-39198211 Msa0950570:intron 40.0%
!!! TATAGGGAGTTTTGGGTCTT+AGG + chr6_3:39198200-39198219 Msa0950570:intron 40.0%
GCCAGATAACAATCACCATA+AGG + chr6_3:39198519-39198538 Msa0950570:CDS 40.0%
!! AGTTTAGGGAAGGTACCTTA+TGG - chr6_3:39198537-39198556 None:intergenic 40.0%
CATGTAGCAGTAGCAACTAT+TGG - chr6_3:39198879-39198898 None:intergenic 40.0%
TAGTTGCTACTGCTACATGT+TGG + chr6_3:39198880-39198899 Msa0950570:three_prime_UTR 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr6_3:39199021-39199040 None:intergenic 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr6_3:39199022-39199041 None:intergenic 40.0%
GGGTTGTTAAGGAAATTGGG+AGG - chr6_3:39191035-39191054 None:intergenic 45.0%
GAGATGGTGAAGAAAAGTGG+TGG - chr6_3:39191056-39191075 None:intergenic 45.0%
GTGGAGATGGTGAAGAAAAG+TGG - chr6_3:39191059-39191078 None:intergenic 45.0%
GATGGGGTGCAAAATCAGAA+AGG + chr6_3:39191817-39191836 Msa0950570:intron 45.0%
TGGGGTGCAAAATCAGAAAG+GGG + chr6_3:39191819-39191838 Msa0950570:intron 45.0%
TCAGAAAGGGGGCAAAAAGA+TGG + chr6_3:39191831-39191850 Msa0950570:intron 45.0%
CAGAAAGGGGGCAAAAAGAT+GGG + chr6_3:39191832-39191851 Msa0950570:intron 45.0%
AGAAAGGGGGCAAAAAGATG+GGG + chr6_3:39191833-39191852 Msa0950570:intron 45.0%
AATGGAGCAACCTCGCTAAA+TGG + chr6_3:39192581-39192600 Msa0950570:intron 45.0%
ACCCCCACTAGAATTGGAAT+AGG + chr6_3:39192816-39192835 Msa0950570:intron 45.0%
! GTGTCTCTGTGCTTGCTAAA+GGG - chr6_3:39192863-39192882 None:intergenic 45.0%
! CATTTAAAATGACCCTGCCG+AGG + chr6_3:39192952-39192971 Msa0950570:intron 45.0%
TCTTCTTCGAGTGAAGCTAG+TGG - chr6_3:39193015-39193034 None:intergenic 45.0%
! GAAGCAGCAAGAGTATGTTG+TGG + chr6_3:39193033-39193052 Msa0950570:intron 45.0%
! GTGTGACAAAGAAGTGGACT+TGG - chr6_3:39193315-39193334 None:intergenic 45.0%
ATGCAGGTGTGACAAAGAAG+TGG - chr6_3:39193321-39193340 None:intergenic 45.0%
GAAAAAGAACACCTGTGGTG+GGG + chr6_3:39193342-39193361 Msa0950570:intron 45.0%
CACGTTAGACTCCAAGACAA+AGG - chr6_3:39193377-39193396 None:intergenic 45.0%
TCTTGGAGTCTAACGTGTGT+TGG + chr6_3:39193380-39193399 Msa0950570:intron 45.0%
CGCAAACTAGGTTATTGGGA+TGG - chr6_3:39193473-39193492 None:intergenic 45.0%
TTCTCCACATGAGGCAAAAG+AGG + chr6_3:39193591-39193610 Msa0950570:intron 45.0%
! TTCACCCCTTTTCGAAAGAG+TGG - chr6_3:39193677-39193696 None:intergenic 45.0%
GCAAGATTTCTTGTTCGAGG+TGG - chr6_3:39193830-39193849 None:intergenic 45.0%
ATGCCCCTCCAAACATAACT+TGG + chr6_3:39193857-39193876 Msa0950570:intron 45.0%
TGCCCCTCCAAACATAACTT+GGG + chr6_3:39193858-39193877 Msa0950570:intron 45.0%
GCCACAACCCAAGTTATGTT+TGG - chr6_3:39193868-39193887 None:intergenic 45.0%
GCTGAAAGAAAACTACGCGT+AGG + chr6_3:39193896-39193915 Msa0950570:intron 45.0%
TTGGCGATGTTAGGTAAGCA+AGG - chr6_3:39193983-39194002 None:intergenic 45.0%
CTAATTCTCGTGGTATCCAC+TGG - chr6_3:39194078-39194097 None:intergenic 45.0%
CAGTGGATACCACGAGAATT+AGG + chr6_3:39194076-39194095 Msa0950570:intron 45.0%
GATGAAGTAGCAGAAGAAGC+TGG - chr6_3:39194296-39194315 None:intergenic 45.0%
TTCCACCTATCCTAGGTTGT+AGG + chr6_3:39194397-39194416 Msa0950570:intron 45.0%
GATTGCCTACAACCTAGGAT+AGG - chr6_3:39194405-39194424 None:intergenic 45.0%
CTAGGTTGTAGGCAATCACA+GGG + chr6_3:39194408-39194427 Msa0950570:intron 45.0%
TCATGCATAACTGAGCGATC+GGG + chr6_3:39194488-39194507 Msa0950570:intron 45.0%
CCACAATAATCAGAGGAGTC+CGG - chr6_3:39194741-39194760 None:intergenic 45.0%
CGGACTCCTCTGATTATTGT+GGG + chr6_3:39194739-39194758 Msa0950570:intron 45.0%
GGACTCCTCTGATTATTGTG+GGG + chr6_3:39194740-39194759 Msa0950570:intron 45.0%
GATGACCCCACAATAATCAG+AGG - chr6_3:39194748-39194767 None:intergenic 45.0%
TTATTGTGGGGTCATCCTCA+CGG + chr6_3:39194752-39194771 Msa0950570:intron 45.0%
AACCTTTCGTATCCAACTGG+CGG + chr6_3:39194799-39194818 Msa0950570:intron 45.0%
ATCCTCAACTCCACTACTGA+CGG + chr6_3:39194892-39194911 Msa0950570:intron 45.0%
!! GTTTCTAGGATCCTCCAACA+TGG - chr6_3:39195339-39195358 None:intergenic 45.0%
TTGGGGGAAATTGGTAGACA+AGG - chr6_3:39195544-39195563 None:intergenic 45.0%
CACTTTAGTCCTAAGGTTGG+AGG - chr6_3:39195696-39195715 None:intergenic 45.0%
CTCCAACCTTAGGACTAAAG+TGG + chr6_3:39195694-39195713 Msa0950570:intron 45.0%
! CTCACCTTGACATTTTTCCG+AGG + chr6_3:39195869-39195888 Msa0950570:intron 45.0%
GAGACCTCGGAAAAATGTCA+AGG - chr6_3:39195876-39195895 None:intergenic 45.0%
AATGAATTCGGAACACGCAG+AGG - chr6_3:39195979-39195998 None:intergenic 45.0%
!! TGGTTGTGTCGGTTGAAGTT+TGG - chr6_3:39196002-39196021 None:intergenic 45.0%
ACGGGTTTGAATGTGTAACC+TGG - chr6_3:39196255-39196274 None:intergenic 45.0%
! AGTGACATTAGAGGTGATGG+TGG + chr6_3:39196583-39196602 Msa0950570:intron 45.0%
!! ACATTAGAGGTGATGGTGGT+GGG + chr6_3:39196587-39196606 Msa0950570:intron 45.0%
!!! CTTTTTGGAGCAACCATGTG+TGG - chr6_3:39196671-39196690 None:intergenic 45.0%
! TTGGGATTCATGGTGGTGAA+GGG + chr6_3:39196883-39196902 Msa0950570:intron 45.0%
TTGTTAGGAGCAGTTATGGC+TGG + chr6_3:39197531-39197550 Msa0950570:CDS 45.0%
ACATGGGGTGATCATTGATG+TGG + chr6_3:39197883-39197902 Msa0950570:intron 45.0%
CATGGGGTGATCATTGATGT+GGG + chr6_3:39197884-39197903 Msa0950570:intron 45.0%
!! GATGGAATGTTGATTCAGGC+AGG - chr6_3:39197910-39197929 None:intergenic 45.0%
CATTCCATCAAGATGCGAGT+TGG + chr6_3:39197921-39197940 Msa0950570:intron 45.0%
ATTCCCAACTCGCATCTTGA+TGG - chr6_3:39197928-39197947 None:intergenic 45.0%
! TTAAGCGTCAGAGTGTTTGC+TGG - chr6_3:39197952-39197971 None:intergenic 45.0%
TACCTTTGTGTTGTGGTCCT+AGG + chr6_3:39198009-39198028 Msa0950570:intron 45.0%
TGATACCCACGGTTTGTAAC+CGG - chr6_3:39198083-39198102 None:intergenic 45.0%
TGTGTTCGGGCTTAGCATAT+AGG + chr6_3:39198183-39198202 Msa0950570:intron 45.0%
GTGTTCGGGCTTAGCATATA+GGG + chr6_3:39198184-39198203 Msa0950570:intron 45.0%
!! CATAGGTGTTGAGTGCAAGT+TGG - chr6_3:39198718-39198737 None:intergenic 45.0%
GCACTCAACACCTATGAGAA+AGG + chr6_3:39198722-39198741 Msa0950570:CDS 45.0%
TATTTCCCACTATCCAGCGC+AGG + chr6_3:39191268-39191287 Msa0950570:CDS 50.0%
TTGATCCTGCGCTGGATAGT+GGG - chr6_3:39191276-39191295 None:intergenic 50.0%
TTTGATCCTGCGCTGGATAG+TGG - chr6_3:39191277-39191296 None:intergenic 50.0%
! TTGCTCTTTTGATCCTGCGC+TGG - chr6_3:39191284-39191303 None:intergenic 50.0%
AGGGGAAAAGGGGCAAAAGA+TGG + chr6_3:39191704-39191723 Msa0950570:intron 50.0%
GGGGAAAAGGGGCAAAAGAT+GGG + chr6_3:39191705-39191724 Msa0950570:intron 50.0%
GGGAAAAGGGGCAAAAGATG+GGG + chr6_3:39191706-39191725 Msa0950570:intron 50.0%
GGGGTGCAAAATCAGAAAGG+GGG + chr6_3:39191820-39191839 Msa0950570:intron 50.0%
AAGCAGCTCACCATTTAGCG+AGG - chr6_3:39192594-39192613 None:intergenic 50.0%
AAGGCTACCCCCACTAGAAT+TGG + chr6_3:39192810-39192829 Msa0950570:intron 50.0%
ATAGGACACACAGGGGTAAC+TGG + chr6_3:39192834-39192853 Msa0950570:intron 50.0%
TAGGACACACAGGGGTAACT+GGG + chr6_3:39192835-39192854 Msa0950570:intron 50.0%
! GGTGTCTCTGTGCTTGCTAA+AGG - chr6_3:39192864-39192883 None:intergenic 50.0%
TGTTGGCAAAATCCTCGGCA+GGG - chr6_3:39192967-39192986 None:intergenic 50.0%
TTGTTGGCAAAATCCTCGGC+AGG - chr6_3:39192968-39192987 None:intergenic 50.0%
TTTGGCCAACACCCCTCATA+TGG - chr6_3:39193082-39193101 None:intergenic 50.0%
CAGCTCTCTTGTGGAGTTTG+CGG - chr6_3:39193194-39193213 None:intergenic 50.0%
GTTCTCCAAAAACTGTCGCG+AGG - chr6_3:39193234-39193253 None:intergenic 50.0%
GGCACTACACTCCTTTGTCT+TGG + chr6_3:39193363-39193382 Msa0950570:intron 50.0%
! GACTCCTCTTTTGCCTCATG+TGG - chr6_3:39193598-39193617 None:intergenic 50.0%
TGTTCTCAATGAACCGTGGC+TGG - chr6_3:39193772-39193791 None:intergenic 50.0%
!! TCTGGTTTCCCGCATTTTCG+AGG - chr6_3:39193933-39193952 None:intergenic 50.0%
CGATGTTAGGTAAGCAAGGC+TGG - chr6_3:39193979-39193998 None:intergenic 50.0%
TGGTATCCACTGGATGTCGT+GGG - chr6_3:39194068-39194087 None:intergenic 50.0%
CACGATGGTCCTAATTCTCG+TGG - chr6_3:39194088-39194107 None:intergenic 50.0%
! TATGGGTGTTACAGGCACGA+TGG - chr6_3:39194103-39194122 None:intergenic 50.0%
AAAAGGGATTGGGGTGAGAC+AGG + chr6_3:39194361-39194380 Msa0950570:intron 50.0%
CAGTGAGTTCCACCTATCCT+AGG + chr6_3:39194390-39194409 Msa0950570:intron 50.0%
TGCCTACAACCTAGGATAGG+TGG - chr6_3:39194402-39194421 None:intergenic 50.0%
CCTGTGATTGCCTACAACCT+AGG - chr6_3:39194410-39194429 None:intergenic 50.0%
CCTAGGTTGTAGGCAATCAC+AGG + chr6_3:39194407-39194426 Msa0950570:intron 50.0%
TAGGCAATCACAGGGAACCT+AGG + chr6_3:39194416-39194435 Msa0950570:intron 50.0%
TAGAGACAGATGGCGATCCT+AGG - chr6_3:39194436-39194455 None:intergenic 50.0%
CATGCATAACTGAGCGATCG+GGG + chr6_3:39194489-39194508 Msa0950570:intron 50.0%
ATGCATAACTGAGCGATCGG+GGG + chr6_3:39194490-39194509 Msa0950570:intron 50.0%
CCGGACTCCTCTGATTATTG+TGG + chr6_3:39194738-39194757 Msa0950570:intron 50.0%
GGGAACCTTTCGTATCCAAC+TGG + chr6_3:39194796-39194815 Msa0950570:intron 50.0%
ACCTTTCGTATCCAACTGGC+GGG + chr6_3:39194800-39194819 Msa0950570:intron 50.0%
TCCTCAACTCCACTACTGAC+GGG + chr6_3:39194893-39194912 Msa0950570:intron 50.0%
CTAGGATCCTCCAACATGGA+TGG - chr6_3:39195335-39195354 None:intergenic 50.0%
GTGTAGACGTTGGGGGAAAT+TGG - chr6_3:39195553-39195572 None:intergenic 50.0%
TAATTGGGACCCAAGCAGCA+TGG - chr6_3:39195898-39195917 None:intergenic 50.0%
AAGCTATACGGGTTTGGGCA+TGG - chr6_3:39196095-39196114 None:intergenic 50.0%
!! GACATTAGAGGTGATGGTGG+TGG + chr6_3:39196586-39196605 Msa0950570:intron 50.0%
!! CATTAGAGGTGATGGTGGTG+GGG + chr6_3:39196588-39196607 Msa0950570:intron 50.0%
AGAGGGGCGATTGAGCTAAA+TGG + chr6_3:39196754-39196773 Msa0950570:intron 50.0%
TTGGAGGTTGGGATTCATGG+TGG + chr6_3:39196876-39196895 Msa0950570:intron 50.0%
! GTTGGGATTCATGGTGGTGA+AGG + chr6_3:39196882-39196901 Msa0950570:intron 50.0%
! GATTCATGGTGGTGAAGGGT+CGG + chr6_3:39196887-39196906 Msa0950570:intron 50.0%
AAGGGTCGGTTATGGCTAGA+GGG + chr6_3:39196901-39196920 Msa0950570:intron 50.0%
GTCCTAGGACCACAACACAA+AGG - chr6_3:39198014-39198033 None:intergenic 50.0%
AGTTGTTGGAGTAGTCGCTG+AGG + chr6_3:39198056-39198075 Msa0950570:intron 50.0%
GTTGTTGGAGTAGTCGCTGA+GGG + chr6_3:39198057-39198076 Msa0950570:intron 50.0%
CCCTCATATGGCAGCTAGGA+CGG - chr6_3:39193070-39193089 None:intergenic 55.0%
CCGTCCTAGCTGCCATATGA+GGG + chr6_3:39193067-39193086 Msa0950570:intron 55.0%
CGTCCTAGCTGCCATATGAG+GGG + chr6_3:39193068-39193087 Msa0950570:intron 55.0%
ACACCCCTCATATGGCAGCT+AGG - chr6_3:39193074-39193093 None:intergenic 55.0%
! AGCTGCCATATGAGGGGTGT+TGG + chr6_3:39193074-39193093 Msa0950570:intron 55.0%
CTTCGGCTACTGTTTCGGTG+AGG + chr6_3:39193139-39193158 Msa0950570:intron 55.0%
CTTTCTCCATTGGCCAGCCA+CGG + chr6_3:39193756-39193775 Msa0950570:intron 55.0%
! AATGAACCGTGGCTGGCCAA+TGG - chr6_3:39193765-39193784 None:intergenic 55.0%
TTGTTCGAGGTGGGGATCGT+TGG - chr6_3:39193820-39193839 None:intergenic 55.0%
ATGCGGGAAACCAGATAGCC+CGG + chr6_3:39193938-39193957 Msa0950570:intron 55.0%
CCTTACGAAACCGGGCTATC+TGG - chr6_3:39193951-39193970 None:intergenic 55.0%
CCAGATAGCCCGGTTTCGTA+AGG + chr6_3:39193948-39193967 Msa0950570:intron 55.0%
ACTTCTCCCACGACATCCAG+TGG + chr6_3:39194059-39194078 Msa0950570:intron 55.0%
GTGGTATCCACTGGATGTCG+TGG - chr6_3:39194069-39194088 None:intergenic 55.0%
TGGTGCGCACGCTGAACATT+TGG - chr6_3:39194320-39194339 None:intergenic 55.0%
TGAGCGATCGGGGGATAACT+AGG + chr6_3:39194499-39194518 Msa0950570:intron 55.0%
AAACCCAGGTGGAGTAACCC+CGG + chr6_3:39194654-39194673 Msa0950570:intron 55.0%
ATTCCGGGGTTACTCCACCT+GGG - chr6_3:39194660-39194679 None:intergenic 55.0%
AATTCCGGGGTTACTCCACC+TGG - chr6_3:39194661-39194680 None:intergenic 55.0%
TCAGTTGGGTTCTCGCCAGT+TGG - chr6_3:39194710-39194729 None:intergenic 55.0%
ACTGGCGAGAACCCAACTGA+CGG + chr6_3:39194710-39194729 Msa0950570:intron 55.0%
AACCCAACTGACGGGGATAC+CGG + chr6_3:39194719-39194738 Msa0950570:intron 55.0%
ATAGTGCCCGTTCCAACTGG+CGG + chr6_3:39194775-39194794 Msa0950570:intron 55.0%
AAGGTTCCCGCCAGTTGGAA+CGG - chr6_3:39194785-39194804 None:intergenic 55.0%
TACGAAAGGTTCCCGCCAGT+TGG - chr6_3:39194790-39194809 None:intergenic 55.0%
TCCCGCCAGTTGGATACGAA+AGG - chr6_3:39194804-39194823 None:intergenic 55.0%
CCTCAACTCCACTACTGACG+GGG + chr6_3:39194894-39194913 Msa0950570:intron 55.0%
CTCTATCTCCCCGTCAGTAG+TGG - chr6_3:39194905-39194924 None:intergenic 55.0%
CTACTGACGGGGAGATAGAG+AGG + chr6_3:39194905-39194924 Msa0950570:intron 55.0%
CACGCAGAGGCCATAAGTTG+TGG - chr6_3:39195966-39195985 None:intergenic 55.0%
! TGGTGGTGAAGGGTCGGTTA+TGG + chr6_3:39196893-39196912 Msa0950570:intron 55.0%
GAAGGGTCGGTTATGGCTAG+AGG + chr6_3:39196900-39196919 Msa0950570:intron 55.0%
GTCGGTTATGGCTAGAGGGA+AGG + chr6_3:39196905-39196924 Msa0950570:intron 55.0%
GGTTATGGCTAGAGGGAAGG+AGG + chr6_3:39196908-39196927 Msa0950570:intron 55.0%
GGCGGCATGTAGAGAGAACC+TGG + chr6_3:39192674-39192693 Msa0950570:intron 60.0%
TATGGCAGCTAGGACGGCAC+AGG - chr6_3:39193064-39193083 None:intergenic 60.0%
GCCGTCCTAGCTGCCATATG+AGG + chr6_3:39193066-39193085 Msa0950570:intron 60.0%
GGTGGGGATCGTTGGTGCAT+TGG - chr6_3:39193812-39193831 None:intergenic 60.0%
! ACTTGGGTTGTGGCCCACAC+TGG + chr6_3:39193874-39193893 Msa0950570:intron 60.0%
CTGGCGAGAACCCAACTGAC+GGG + chr6_3:39194711-39194730 Msa0950570:intron 60.0%
TGGCGAGAACCCAACTGACG+GGG + chr6_3:39194712-39194731 Msa0950570:intron 60.0%
GTCCGGTATCCCCGTCAGTT+GGG - chr6_3:39194724-39194743 None:intergenic 60.0%
AGTCCGGTATCCCCGTCAGT+TGG - chr6_3:39194725-39194744 None:intergenic 60.0%
TGGAACGGGCACTATCCGTG+AGG - chr6_3:39194770-39194789 None:intergenic 60.0%
CGGATAGTGCCCGTTCCAAC+TGG + chr6_3:39194772-39194791 Msa0950570:intron 60.0%
TAGTGCCCGTTCCAACTGGC+GGG + chr6_3:39194776-39194795 Msa0950570:intron 60.0%
AGGTTCCCGCCAGTTGGAAC+GGG - chr6_3:39194784-39194803 None:intergenic 60.0%
GCTTTCGCTATCCCGCCAGT+TGG - chr6_3:39194814-39194833 None:intergenic 60.0%
! CCCCGTCAGTAGTGGAGTTG+AGG - chr6_3:39194897-39194916 None:intergenic 60.0%
TCCGAGGTCTCCATGCTGCT+TGG + chr6_3:39195885-39195904 Msa0950570:intron 60.0%
CCCAAGCAGCATGGAGACCT+CGG - chr6_3:39195889-39195908 None:intergenic 60.0%
! CCGAGGTCTCCATGCTGCTT+GGG + chr6_3:39195886-39195905 Msa0950570:intron 60.0%
TTGGAGTAGTCGCTGAGGGC+CGG + chr6_3:39198061-39198080 Msa0950570:intron 60.0%
TGAGGGCCGGTTACAAACCG+TGG + chr6_3:39198074-39198093 Msa0950570:intron 60.0%
GAGGGCCGGTTACAAACCGT+GGG + chr6_3:39198075-39198094 Msa0950570:intron 60.0%
GGAGTGTAGTGCCCCACCAC+AGG - chr6_3:39193356-39193375 None:intergenic 65.0%
GAGGCTGCGAGTTCCTCCGA+AGG - chr6_3:39193444-39193463 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 39190932 39199048 39190932 ID=Msa0950570;Name=Msa0950570
chr6_3 mRNA 39190932 39199048 39190932 ID=Msa0950570-mRNA-1;Parent=Msa0950570;Name=Msa0950570-mRNA-1;_AED=0.01;_eAED=0.01;_QI=53|1|1|1|0.66|0.75|4|180|264
chr6_3 exon 39190932 39191311 39190932 ID=Msa0950570-mRNA-1:exon:9498;Parent=Msa0950570-mRNA-1
chr6_3 exon 39197426 39197635 39197426 ID=Msa0950570-mRNA-1:exon:9499;Parent=Msa0950570-mRNA-1
chr6_3 exon 39198515 39198540 39198515 ID=Msa0950570-mRNA-1:exon:9500;Parent=Msa0950570-mRNA-1
chr6_3 exon 39198637 39199048 39198637 ID=Msa0950570-mRNA-1:exon:9501;Parent=Msa0950570-mRNA-1
chr6_3 five_prime_UTR 39190932 39190984 39190932 ID=Msa0950570-mRNA-1:five_prime_utr;Parent=Msa0950570-mRNA-1
chr6_3 CDS 39190985 39191311 39190985 ID=Msa0950570-mRNA-1:cds;Parent=Msa0950570-mRNA-1
chr6_3 CDS 39197426 39197635 39197426 ID=Msa0950570-mRNA-1:cds;Parent=Msa0950570-mRNA-1
chr6_3 CDS 39198515 39198540 39198515 ID=Msa0950570-mRNA-1:cds;Parent=Msa0950570-mRNA-1
chr6_3 CDS 39198637 39198868 39198637 ID=Msa0950570-mRNA-1:cds;Parent=Msa0950570-mRNA-1
chr6_3 three_prime_UTR 39198869 39199048 39198869 ID=Msa0950570-mRNA-1:three_prime_utr;Parent=Msa0950570-mRNA-1
Gene Sequence

>Msa0950570

ATGTTGCACTCTCACTTACACAATCATCACCAATTTCTCTTCACAAACCTCCCAATTTCCTTAACAACCCACCACTTTTCTTCACCATCTCCACTTCATAAATTTCAACATAATTTTCACTCTATTTCTGCCATTAATCCTTCTCATGAAGTATTTTTACCGTGGCTAAATAAATTAACCACTGCAAAAGTGGAATTAAGCCCCATTTTTGATGCTATAGATGACTCTTCTTCAAACCAAGTAACTATCAGTGTTGTTCTCTCTGTAGCCATTGCTGTTTTCTTATTTCCCACTATCCAGCGCAGGATCAAAAGAGCAAAACAATTGAAATATAGGTCTTCTGGAGTGAAGAAGTCATCATTGAATAGCACAAAAGGACTTATGGGATCAACTAAAAAGAAATCTAAGAATCCACCTTCACCAGATAAAGCATTGTTAGGAGCAGTTATGGCTGGTGTTATTGCTGTTATTCTCTATAAATTCACAACAACTATAGAAGCGTCTCTATATCGCCAAACAATTTCAGACAATTTCTCGGTTCGCCAGATAACAATCACCATAAGAACGGTAATAAATGGCTTATGCTACCTATCTACATTTGTGTATGGAATAAACTCTTTTGGTTTGTTGCTTTATTCTGGCCAACTTGCACTCAACACCTATGAGAAAGGATCATCAAGTGGAAAGAAAACTGAAAGCAAAATCATGGAGAATTCATACTTGTCAAATTCATCTAATGAGAATCACACAAATAGCAACAAAAATGAAGATCAAAGTTCAAATAATTCACAATAA

Protein sequence

>Msa0950570

MLHSHLHNHHQFLFTNLPISLTTHHFSSPSPLHKFQHNFHSISAINPSHEVFLPWLNKLTTAKVELSPIFDAIDDSSSNQVTISVVLSVAIAVFLFPTIQRRIKRAKQLKYRSSGVKKSSLNSTKGLMGSTKKKSKNPPSPDKALLGAVMAGVIAVILYKFTTTIEASLYRQTISDNFSVRQITITIRTVINGLCYLSTFVYGINSFGLLLYSGQLALNTYEKGSSSGKKTESKIMENSYLSNSSNENHTNSNKNEDQSSNNSQ*