AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0448180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0448180 MtrunA17_Chr3g0090111 93.265 490 7 1 1 464 1 490 0.0 939
Msa0448180 MtrunA17_Chr3g0090131 83.537 492 52 3 1 463 1 492 0.0 843
Msa0448180 MtrunA17_Chr4g0043091 48.008 477 207 4 18 454 27 502 1.36e-161 466
Msa0448180 MtrunA17_Chr4g0042171 46.640 491 210 6 15 459 20 504 1.94e-158 458
Msa0448180 MtrunA17_Chr6g0482131 45.816 478 219 5 17 454 34 511 8.01e-150 437
Msa0448180 MtrunA17_Chr6g0482941 47.458 472 207 6 19 453 43 510 3.67e-149 435
Msa0448180 MtrunA17_Chr6g0482081 46.138 479 217 6 17 454 34 512 7.60e-148 432
Msa0448180 MtrunA17_Chr6g0482951 46.610 472 211 6 19 453 43 510 2.68e-147 430
Msa0448180 MtrunA17_Chr2g0329191 44.842 475 223 4 19 454 34 508 1.20e-146 428
Msa0448180 MtrunA17_Chr6g0482071 45.798 476 218 5 19 454 37 512 1.63e-144 423
Msa0448180 MtrunA17_Chr4g0033271 44.328 476 225 5 19 454 35 510 4.73e-144 422
Msa0448180 MtrunA17_Chr2g0329201 44.538 476 224 5 19 454 31 506 4.90e-144 421
Msa0448180 MtrunA17_Chr4g0033311 45.041 484 216 7 19 457 39 517 6.02e-143 419
Msa0448180 MtrunA17_Chr3g0087271 42.526 475 233 5 20 456 39 511 6.55e-143 419
Msa0448180 MtrunA17_Chr4g0033321 46.058 482 219 6 19 460 33 513 9.87e-143 419
Msa0448180 MtrunA17_Chr4g0033261 46.725 458 216 8 19 454 41 492 1.52e-142 417
Msa0448180 MtrunA17_Chr4g0033331 45.474 475 219 5 19 453 39 513 1.81e-142 418
Msa0448180 MtrunA17_Chr4g0033201 44.000 475 226 5 20 454 37 511 4.38e-141 414
Msa0448180 MtrunA17_Chr4g0033401 45.530 481 222 5 19 459 34 514 1.10e-140 413
Msa0448180 MtrunA17_Chr4g0010501 43.542 480 229 5 13 454 18 493 4.41e-140 411
Msa0448180 MtrunA17_Chr3g0087261 42.194 474 236 4 20 456 38 510 3.41e-139 409
Msa0448180 MtrunA17_Chr3g0088441 43.802 484 222 7 19 457 38 516 5.24e-139 409
Msa0448180 MtrunA17_Chr2g0317841 43.737 487 235 5 16 464 29 514 2.27e-138 408
Msa0448180 MtrunA17_Chr4g0033341 44.093 474 227 6 19 454 69 542 6.61e-138 407
Msa0448180 MtrunA17_Chr4g0033191 43.802 484 228 6 19 460 43 524 5.46e-137 404
Msa0448180 MtrunA17_Chr4g0033231 44.255 470 232 8 8 454 30 492 1.97e-135 399
Msa0448180 MtrunA17_Chr2g0329321 43.396 477 202 7 19 454 38 487 4.30e-134 395
Msa0448180 MtrunA17_Chr2g0317821 42.713 494 242 5 10 464 23 514 1.47e-133 395
Msa0448180 MtrunA17_Chr5g0430451 41.322 484 211 5 19 454 39 497 1.74e-131 389
Msa0448180 MtrunA17_Chr4g0006111 43.432 472 239 7 13 458 59 528 9.62e-131 388
Msa0448180 MtrunA17_Chr2g0288021 41.129 496 249 6 7 461 22 515 1.07e-130 388
Msa0448180 MtrunA17_Chr4g0074551 42.857 483 234 6 12 454 43 523 1.06e-127 382
Msa0448180 MtrunA17_Chr4g0074561 42.316 475 225 7 24 453 40 510 1.03e-126 378
Msa0448180 MtrunA17_Chr4g0006131 43.167 461 237 6 18 454 41 500 1.69e-125 374
Msa0448180 MtrunA17_Chr2g0288071 43.552 473 224 7 22 453 70 540 1.82e-123 370
Msa0448180 MtrunA17_Chr4g0006971 39.286 476 241 8 20 457 28 493 1.42e-114 347
Msa0448180 MtrunA17_Chr7g0242681 40.041 482 224 9 19 454 38 500 1.66e-114 347
Msa0448180 MtrunA17_Chr1g0195611 39.076 476 234 10 20 454 28 488 7.23e-112 339
Msa0448180 MtrunA17_Chr5g0428831 39.256 484 223 11 20 454 28 489 2.00e-110 336
Msa0448180 MtrunA17_Chr7g0242691 38.125 480 249 7 13 454 25 494 5.62e-110 335
Msa0448180 MtrunA17_Chr7g0234091 38.248 468 243 8 20 453 76 531 3.13e-99 308
Msa0448180 MtrunA17_Chr2g0301231 43.005 386 194 7 93 454 8 391 3.76e-97 297
Msa0448180 MtrunA17_Chr7g0234111 37.393 468 247 9 20 453 76 531 2.52e-96 300
Msa0448180 MtrunA17_Chr7g0234131 36.887 469 249 8 20 453 76 532 2.59e-95 297
Msa0448180 MtrunA17_Chr5g0418871 46.407 334 135 5 40 332 4 334 3.97e-93 285
Msa0448180 MtrunA17_Chr1g0195641 38.701 385 187 8 21 365 29 404 6.21e-86 269
Msa0448180 MtrunA17_Chr3g0087201 40.244 328 155 4 163 453 19 342 2.31e-78 247
Msa0448180 MtrunA17_Chr7g0230651 35.556 360 191 9 73 400 26 376 1.74e-68 223
Msa0448180 MtrunA17_Chr3g0087191 59.333 150 59 2 13 160 16 165 1.58e-57 187
Msa0448180 MtrunA17_Chr7g0227561 32.632 285 136 5 2 255 28 287 2.31e-46 162
Msa0448180 MtrunA17_Chr7g0236731 36.818 220 108 3 112 300 34 253 5.28e-38 140
Msa0448180 MtrunA17_Chr4g0068871 26.633 398 240 12 82 464 183 543 5.79e-27 114
Msa0448180 MtrunA17_Chr5g0418861 44.444 90 49 1 365 453 1 90 4.30e-23 93.2
Msa0448180 MtrunA17_Chr8g0352881 59.259 54 22 0 26 79 5 58 7.57e-15 72.0
Msa0448180 MtrunA17_Chr8g0352881 33.735 83 55 0 212 294 62 144 9.54e-12 63.2
Msa0448180 MtrunA17_Chr7g0227591 48.148 54 28 0 400 453 12 65 1.48e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0448180 AT5G36890.1 67.653 473 124 5 21 464 18 490 0.0 672
Msa0448180 AT5G36890.2 68.085 470 120 6 21 460 18 487 0.0 669
Msa0448180 AT1G26560.1 48.109 476 205 7 19 453 32 506 2.91e-156 453
Msa0448180 AT3G18080.1 47.046 474 209 6 19 454 39 508 4.34e-150 437
Msa0448180 AT5G54570.1 45.929 479 216 7 17 453 28 505 3.97e-148 433
Msa0448180 AT3G18070.3 44.937 474 211 7 19 454 30 491 3.52e-146 427
Msa0448180 AT3G18070.1 45.148 474 216 7 19 454 30 497 2.28e-145 425
Msa0448180 AT3G60140.1 43.633 479 228 7 18 454 25 503 1.31e-136 405
Msa0448180 AT5G24550.1 43.841 479 226 7 19 454 32 510 1.54e-135 401
Msa0448180 AT5G44640.1 42.678 478 230 6 18 455 30 503 2.75e-135 399
Msa0448180 AT2G44450.1 42.505 487 237 6 11 458 23 505 7.63e-135 398
Msa0448180 AT2G44480.1 42.171 479 238 5 19 458 35 513 1.98e-134 397
Msa0448180 AT2G44480.3 42.171 479 238 5 19 458 66 544 2.79e-134 398
Msa0448180 AT5G24540.1 44.259 479 224 7 19 454 32 510 3.35e-134 397
Msa0448180 AT5G42260.1 43.432 472 223 6 18 449 30 497 3.01e-133 394
Msa0448180 AT2G44470.3 41.996 481 237 6 15 453 25 505 1.17e-128 385
Msa0448180 AT3G60130.1 41.564 486 237 8 18 460 29 510 5.84e-128 381
Msa0448180 AT2G44460.1 42.116 482 235 9 21 460 31 510 4.36e-125 376
Msa0448180 AT1G61820.1 41.237 485 241 7 22 464 33 515 1.07e-124 373
Msa0448180 AT1G61810.1 40.771 493 250 6 9 460 23 514 8.67e-123 368
Msa0448180 AT1G02850.2 41.263 475 228 8 18 454 25 486 9.20e-123 367
Msa0448180 AT2G25630.1 40.966 476 220 7 18 453 29 483 1.88e-122 366
Msa0448180 AT5G54570.3 43.059 425 200 6 17 400 28 451 3.03e-121 362
Msa0448180 AT4G21760.2 41.803 488 230 7 24 464 59 539 5.56e-121 364
Msa0448180 AT2G44490.1 39.592 490 250 10 10 454 5 493 1.05e-119 361
Msa0448180 AT1G51470.1 40.779 488 239 11 4 453 34 509 1.62e-118 357
Msa0448180 AT1G02850.1 42.984 449 230 9 18 454 25 459 1.85e-118 355
Msa0448180 AT1G47600.1 40.779 488 239 11 4 453 34 509 3.61e-118 356
Msa0448180 AT1G47600.2 40.574 488 239 12 4 453 34 508 7.23e-118 355
Msa0448180 AT5G54570.2 44.089 406 185 6 89 453 4 408 2.21e-117 351
Msa0448180 AT1G61810.3 41.416 466 232 5 9 433 23 488 8.62e-117 353
Msa0448180 AT3G60120.1 40.082 489 248 8 9 454 4 490 9.38e-117 353
Msa0448180 AT4G21760.1 41.189 488 223 8 24 464 59 529 5.35e-116 351
Msa0448180 AT1G75940.1 39.877 489 238 11 20 457 38 521 1.70e-113 345
Msa0448180 AT2G32860.1 40.041 482 243 10 16 453 91 570 1.31e-112 345
Msa0448180 AT1G66280.1 39.752 483 247 7 17 457 34 514 1.64e-112 342
Msa0448180 AT4G27830.1 38.969 485 242 11 20 464 24 494 3.26e-112 340
Msa0448180 AT2G32860.2 39.212 482 248 9 16 453 91 571 2.17e-111 342
Msa0448180 AT3G62750.1 39.496 476 241 12 20 464 24 483 3.64e-111 337
Msa0448180 AT4G27820.1 38.763 485 241 10 20 464 24 492 3.68e-111 338
Msa0448180 AT3G21370.1 39.184 490 246 12 15 456 29 514 4.90e-111 338
Msa0448180 AT3G62750.2 39.496 476 241 12 20 464 50 509 7.15e-111 337
Msa0448180 AT4G22100.1 37.810 484 245 10 21 463 24 492 8.56e-110 334
Msa0448180 AT1G66270.1 39.004 482 250 7 18 457 35 514 1.08e-109 334
Msa0448180 AT2G44480.2 39.903 411 209 4 86 458 1 411 4.20e-109 329
Msa0448180 AT1G52400.3 38.889 486 241 10 18 454 38 516 3.46e-108 331
Msa0448180 AT1G52400.1 38.889 486 241 10 18 454 38 516 3.46e-108 331
Msa0448180 AT3G09260.1 38.302 483 253 8 18 457 34 514 9.99e-107 327
Msa0448180 AT5G28510.1 38.776 490 246 9 18 457 38 523 1.35e-106 327
Msa0448180 AT1G45191.4 37.500 472 241 8 20 454 30 484 1.45e-106 326
Msa0448180 AT1G66270.2 38.589 482 250 8 18 457 35 512 3.05e-106 325
Msa0448180 AT1G60090.2 37.605 476 239 9 20 454 25 483 3.15e-106 325
Msa0448180 AT3G03640.1 38.382 482 245 11 21 454 36 513 9.66e-106 325
Msa0448180 AT5G25980.2 38.163 490 255 11 14 460 45 529 1.99e-105 324
Msa0448180 AT1G60090.1 37.344 482 239 9 20 454 25 490 1.02e-104 321
Msa0448180 AT5G24540.2 40.898 423 208 6 19 399 32 454 1.22e-104 319
Msa0448180 AT1G45191.6 37.605 476 246 9 20 454 30 495 9.94e-104 319
Msa0448180 AT1G45191.2 37.185 476 243 9 20 454 30 490 1.61e-103 318
Msa0448180 AT3G62740.1 37.214 481 250 10 20 464 24 488 1.53e-102 315
Msa0448180 AT1G45191.1 37.190 484 249 9 20 454 30 507 1.58e-102 316
Msa0448180 AT2G44470.1 39.437 426 217 5 15 399 25 450 1.88e-101 311
Msa0448180 AT3G60130.2 38.863 422 212 6 81 460 41 458 8.74e-101 310
Msa0448180 AT3G60140.2 41.753 388 185 6 18 364 25 412 1.54e-98 303
Msa0448180 AT3G18070.4 45.253 316 135 3 19 299 30 342 3.33e-96 295
Msa0448180 AT5G26000.1 36.452 513 263 13 2 459 17 521 1.48e-94 296
Msa0448180 AT3G60130.3 37.915 422 205 7 81 460 41 447 1.68e-94 293
Msa0448180 AT1G61810.5 38.350 412 213 5 89 460 4 414 2.92e-94 291
Msa0448180 AT3G62750.4 38.499 413 209 10 20 402 50 447 4.38e-91 285
Msa0448180 AT2G44470.2 44.000 325 144 3 15 301 25 349 1.31e-89 278
Msa0448180 AT1G61810.4 39.798 397 198 5 9 364 23 419 1.53e-89 279
Msa0448180 AT5G25980.3 36.916 428 224 9 14 400 45 467 1.86e-86 273
Msa0448180 AT5G25980.1 36.916 428 224 9 14 400 45 467 1.86e-86 273
Msa0448180 AT4G27830.2 36.754 419 212 10 86 464 1 406 2.47e-85 268
Msa0448180 AT4G27820.2 36.516 419 214 9 86 464 1 407 2.63e-85 268
Msa0448180 AT4G27820.3 36.516 419 214 9 86 464 1 407 2.63e-85 268
Msa0448180 AT3G62740.2 36.867 415 212 8 20 399 24 423 3.03e-85 268
Msa0448180 AT3G18070.2 42.121 330 150 5 163 454 94 420 1.40e-84 266
Msa0448180 AT3G18070.2 52.459 61 29 0 19 79 30 90 1.62e-15 79.0
Msa0448180 AT3G62750.6 37.073 410 215 11 86 464 1 398 1.48e-83 263
Msa0448180 AT3G62750.5 37.073 410 215 11 86 464 1 398 1.48e-83 263
Msa0448180 AT2G44480.4 41.515 330 155 4 19 311 66 394 3.43e-82 259
Msa0448180 AT1G52400.2 37.852 391 195 7 18 364 38 424 7.61e-82 261
Msa0448180 AT2G44450.2 37.709 358 182 4 138 458 1 354 9.00e-82 257
Msa0448180 AT2G44460.2 39.344 366 179 8 136 460 1 364 2.01e-80 256
Msa0448180 AT1G61820.3 37.600 375 191 6 131 464 4 376 5.00e-80 253
Msa0448180 AT1G45191.3 40.694 317 148 3 20 301 30 341 8.92e-79 251
Msa0448180 AT1G45191.5 40.694 317 148 3 20 301 30 341 9.10e-79 251
Msa0448180 AT3G62750.7 41.424 309 147 5 20 300 24 326 2.45e-78 248
Msa0448180 AT3G62750.8 41.424 309 147 5 20 300 24 326 2.45e-78 248
Msa0448180 AT3G18070.7 41.479 311 141 5 182 454 1 308 1.29e-77 245
Msa0448180 AT1G60270.1 38.147 367 176 7 20 347 25 379 2.01e-77 246
Msa0448180 AT3G62750.3 41.424 309 147 5 20 300 50 352 4.96e-77 247
Msa0448180 AT5G26000.2 35.045 448 234 10 2 400 17 456 1.53e-76 246
Msa0448180 AT5G48375.1 33.726 424 209 10 18 418 37 411 2.64e-66 219
Msa0448180 AT1G61810.2 42.199 282 127 2 9 254 23 304 6.58e-66 214
Msa0448180 AT2G44480.5 35.738 305 159 3 191 458 3 307 1.34e-65 214
Msa0448180 AT1G02850.3 53.439 189 85 2 18 206 25 210 5.40e-65 216
Msa0448180 AT1G02850.3 35.484 155 95 3 211 364 274 424 1.15e-22 100
Msa0448180 AT1G02850.4 53.439 189 85 2 18 206 25 210 2.48e-64 216
Msa0448180 AT1G02850.4 38.462 247 139 6 211 454 274 510 6.46e-47 170
Msa0448180 AT1G02850.5 53.439 189 85 2 18 206 25 210 2.59e-64 216
Msa0448180 AT1G02850.5 38.618 246 139 5 211 454 274 509 1.24e-48 174
Msa0448180 AT1G51490.1 37.952 332 151 11 8 300 13 328 1.04e-58 199
Msa0448180 AT1G60270.2 35.714 294 141 6 93 347 8 292 6.24e-52 177
Msa0448180 AT3G18070.5 36.929 241 114 3 163 365 94 334 1.26e-47 167
Msa0448180 AT3G18070.5 52.459 61 29 0 19 79 30 90 1.08e-15 78.6
Msa0448180 AT3G18070.6 35.586 222 105 3 182 365 1 222 7.25e-41 146
Msa0448180 AT5G16580.1 31.010 287 147 7 162 410 26 299 2.08e-34 130
Msa0448180 AT3G06510.2 26.601 406 250 12 81 456 159 546 1.67e-27 116
Msa0448180 AT3G06510.1 26.531 392 234 12 81 456 159 512 7.97e-27 114

Find 114 sgRNAs with CRISPR-Local

Find 545 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGTTCTCTGTGACGTAAAT+AGG 0.098161 3_3:-27501153 None:intergenic
TTTATCCTCCTCTGAGAATT+TGG 0.118696 3_3:-27500708 None:intergenic
TTGAATTCTTTAGACTTTAT+TGG 0.222448 3_3:+27500740 Msa0448180:CDS
ATTTCACATGTGACAGAATC+TGG 0.271078 3_3:+27500788 Msa0448180:CDS
AGTCGTTCACGCATAGTTTC+AGG 0.280791 3_3:-27500671 None:intergenic
GAAACTTGCTTTGCAAGTTT+TGG 0.289507 3_3:+27499478 Msa0448180:CDS
TGATCACTATCATCGGTATT+TGG 0.294765 3_3:+27497811 Msa0448180:CDS
ATACTTTGCATGGTCATTAC+TGG 0.301471 3_3:+27503234 Msa0448180:CDS
GTGGTAGAGGTCCTTGTATA+TGG 0.318294 3_3:+27497612 Msa0448180:CDS
TGGATCACTCAGTTACTTTA+CGG 0.319399 3_3:-27495124 None:intergenic
ACCCAAAGTCTTCTGCATAT+TGG 0.333496 3_3:+27503335 Msa0448180:CDS
GTTGCTTATTTCTAGATAGA+AGG 0.338353 3_3:+27497575 Msa0448180:intron
GTGGCTATATGTTGTTCCTT+GGG 0.339471 3_3:+27501086 Msa0448180:CDS
TTCCCTTCCGACTTCGTCTT+CGG 0.345316 3_3:+27495232 Msa0448180:CDS
CGTTCTCTGTGACGTAAATA+GGG 0.353604 3_3:-27501152 None:intergenic
ACCAATATGCAGAAGACTTT+GGG 0.355117 3_3:-27503336 None:intergenic
TTATCCTCCTCTGAGAATTT+GGG 0.362068 3_3:-27500707 None:intergenic
TAGTTTATCACTTTATCATT+TGG 0.367722 3_3:+27503586 Msa0448180:three_prime_UTR
AGTGGCTATATGTTGTTCCT+TGG 0.380075 3_3:+27501085 Msa0448180:CDS
TCTTCAATCTTATCAGAGTT+AGG 0.381995 3_3:-27500166 None:intergenic
ACCTCTACCACCCTCATTGC+TGG 0.384576 3_3:-27497600 None:intergenic
CTTATGTAACTTTGTACCAT+TGG 0.393477 3_3:+27498802 Msa0448180:CDS
TTATGTAACTTTGTACCATT+GGG 0.404696 3_3:+27498803 Msa0448180:CDS
AGTCGCCACTTCCGCTTATC+AGG 0.405190 3_3:+27495255 Msa0448180:CDS
ATGTTGTTCCTTGGGGTCTT+CGG 0.421588 3_3:+27501094 Msa0448180:CDS
CCCTTCAAACCGCAGTCAAT+GGG 0.423266 3_3:+27499536 Msa0448180:CDS
CCCCTTCAAACCGCAGTCAA+TGG 0.429192 3_3:+27499535 Msa0448180:CDS
ACCCATTGACTGCGGTTTGA+AGG 0.432694 3_3:-27499537 None:intergenic
GCAGTCAATGGGTATGATCT+TGG 0.439291 3_3:+27499547 Msa0448180:CDS
GAAGAGTTTCTGAGAGAAAA+CGG 0.443964 3_3:+27495175 Msa0448180:CDS
ATTAATGCTCTTCTAGAAAG+AGG 0.444581 3_3:+27498689 Msa0448180:CDS
TATTGATCTTATAGCCAAGT+TGG 0.446830 3_3:+27498250 Msa0448180:CDS
TTGGTGATAGAGTGAAGAAC+TGG 0.450789 3_3:+27499497 Msa0448180:CDS
AACCAATATGCAGAAGACTT+TGG 0.453110 3_3:-27503337 None:intergenic
TATCCCTTCATCATTGACTT+TGG 0.455682 3_3:-27498648 None:intergenic
TCCACAGTTGAATGGGAAGA+TGG 0.455856 3_3:+27500927 Msa0448180:intron
ATTTGGTCAAATATCATTTG+TGG 0.459800 3_3:+27503603 Msa0448180:three_prime_UTR
ATTGATCTTATAGCCAAGTT+GGG 0.461829 3_3:+27498251 Msa0448180:CDS
CCTCTGAGAATTTGGGAAGC+TGG 0.464440 3_3:-27500700 None:intergenic
ATAAATAAGAGTATATGTTA+AGG 0.464651 3_3:-27503521 None:intergenic
GTGAGAGAGGATCTATCATA+TGG 0.469192 3_3:-27494799 None:intergenic
ACTGAGGGTTCAATACTTCA+AGG 0.469260 3_3:+27502590 Msa0448180:CDS
ATAGACCAATCCGAAGCGTT+TGG 0.469827 3_3:-27503284 None:intergenic
CCCATTGACTGCGGTTTGAA+GGG 0.475358 3_3:-27499536 None:intergenic
ACTGCATCTTGATGAGTCAA+TGG 0.476677 3_3:+27498833 Msa0448180:CDS
ACCAGCCAATCTGAAAATCT+AGG 0.476876 3_3:-27500210 None:intergenic
AATGACAGAAGTTCTTGTTC+TGG 0.482194 3_3:-27503451 None:intergenic
ATCTATCATATGGAAATTGT+CGG 0.483663 3_3:-27494789 None:intergenic
CAAGGTTATACCAAACGCTT+CGG 0.487707 3_3:+27503274 Msa0448180:CDS
GGAACCAAAGTCAATGATGA+AGG 0.490644 3_3:+27498644 Msa0448180:CDS
GCCAGCAATGAGGGTGGTAG+AGG 0.503943 3_3:+27497599 Msa0448180:CDS
GCACAGGCGATGGAGAGAAT+TGG 0.504160 3_3:+27500830 Msa0448180:CDS
CAATGGTACAAAGTTACATA+AGG 0.510785 3_3:-27498801 None:intergenic
TTCTTGCATCCACTGTATCA+TGG 0.511560 3_3:+27500641 Msa0448180:CDS
TGGTAGAGGTCCTTGTATAT+GGG 0.516624 3_3:+27497613 Msa0448180:CDS
CTGCATCTTGATGAGTCAAT+GGG 0.519946 3_3:+27498834 Msa0448180:CDS
GAAACTATGCGTGAACGACT+TGG 0.521373 3_3:+27500674 Msa0448180:CDS
TTATACCAAACGCTTCGGAT+TGG 0.523284 3_3:+27503279 Msa0448180:CDS
TCATCTAGCATCTCATGTAA+TGG 0.525554 3_3:-27502564 None:intergenic
TTTCGCGGTTTCTGAAAGAT+GGG 0.531690 3_3:+27503359 Msa0448180:CDS
TTTATGGGTGTAGATGGCTT+AGG 0.532256 3_3:+27498623 Msa0448180:intron
CACACCTTCAGTGTGTGTAA+AGG 0.536303 3_3:-27497639 None:intergenic
GTGTACCTGATAAGCGGAAG+TGG 0.536871 3_3:-27495260 None:intergenic
TCTATCATATGGAAATTGTC+GGG 0.539842 3_3:-27494788 None:intergenic
ATAGAAGGTGCCAGCAATGA+GGG 0.544689 3_3:+27497590 Msa0448180:CDS
TGTTCCTTGGGGTCTTCGGA+AGG 0.546787 3_3:+27501098 Msa0448180:CDS
ATTACTGGACAACTTCGAAT+GGG 0.548009 3_3:+27503249 Msa0448180:CDS
GGCTGGTTGTAGACTGTGAA+TGG 0.548806 3_3:+27500137 Msa0448180:CDS
TGGGAAGATGGTCAGCTCAT+TGG 0.550246 3_3:+27500939 Msa0448180:CDS
GAAAGATGGGACAAACAAGA+AGG 0.551603 3_3:+27503372 Msa0448180:CDS
CATTACTGGACAACTTCGAA+TGG 0.554051 3_3:+27503248 Msa0448180:CDS
TCATCATTATGTGTCTTACA+AGG 0.557239 3_3:+27503416 Msa0448180:three_prime_UTR
TGGCTATATGTTGTTCCTTG+GGG 0.561938 3_3:+27501087 Msa0448180:CDS
ATACGTGGCATCAGTTGCGC+AGG 0.565109 3_3:+27502614 Msa0448180:CDS
ACTCCGAAGACGAAGTCGGA+AGG 0.566587 3_3:-27495235 None:intergenic
TGGTCAGCTCATTGGTGAGA+AGG 0.568038 3_3:+27500947 Msa0448180:CDS
TCTGTGACGTAAATAGGGGC+AGG 0.575565 3_3:-27501147 None:intergenic
CCTATTTACGTCACAGAGAA+CGG 0.576245 3_3:+27501153 Msa0448180:CDS
TTACTACAACGCACAGGCGA+TGG 0.576833 3_3:+27500820 Msa0448180:CDS
GACAACTTCGAATGGGCTCA+AGG 0.583519 3_3:+27503256 Msa0448180:CDS
CCATTGACTGCGGTTTGAAG+GGG 0.584084 3_3:-27499535 None:intergenic
AAAATACTTGACAAAAGCAA+TGG 0.585232 3_3:+27497776 Msa0448180:CDS
ATCTAGGCGTCTAGCAGCAG+CGG 0.589286 3_3:-27500194 None:intergenic
TAACATAAATGATGTGAGAG+AGG 0.591000 3_3:-27494812 None:intergenic
CTGAGGGTTCAATACTTCAA+GGG 0.592459 3_3:+27502591 Msa0448180:CDS
CTCCGAAGACGAAGTCGGAA+GGG 0.598844 3_3:-27495234 None:intergenic
GTAAGCGCTAAAACCCAACT+TGG 0.599223 3_3:-27498264 None:intergenic
ATGTGAGAGGATACTTTGCA+TGG 0.603661 3_3:+27503224 Msa0448180:CDS
GAACCAAAGTCAATGATGAA+GGG 0.606857 3_3:+27498645 Msa0448180:CDS
TAGCAGTTGATCACTATCAT+CGG 0.610199 3_3:+27497804 Msa0448180:CDS
GATAGAAGGTGCCAGCAATG+AGG 0.618430 3_3:+27497589 Msa0448180:intron
ATTGACTCATCAAGATGCAG+TGG 0.618454 3_3:-27498831 None:intergenic
GTAAAGGCATCCCATATACA+AGG 0.624711 3_3:-27497623 None:intergenic
AAAGATGGGACAAACAAGAA+GGG 0.626543 3_3:+27503373 Msa0448180:CDS
GAGACAGTGTACCTGATAAG+CGG 0.639999 3_3:-27495266 None:intergenic
GCTTCCCAAATTCTCAGAGG+AGG 0.640911 3_3:+27500703 Msa0448180:CDS
AGGGATGGAGCAGATGTGAG+AGG 0.641641 3_3:+27503211 Msa0448180:intron
AGATGCTAGATGACAAACTG+AGG 0.649376 3_3:+27502574 Msa0448180:CDS
TTGATGAGTCAATGGGAGGA+TGG 0.652779 3_3:+27498841 Msa0448180:CDS
ATAACCTTCCGAAGACCCCA+AGG 0.652873 3_3:-27501102 None:intergenic
GGCGACTCCGAAGACGAAGT+CGG 0.658507 3_3:-27495239 None:intergenic
AAGTTATTACTACAACGCAC+AGG 0.659127 3_3:+27500814 Msa0448180:CDS
GTTCTCTGTGACGTAAATAG+GGG 0.663178 3_3:-27501151 None:intergenic
GTCTAAATCACTATACAACA+AGG 0.663804 3_3:+27500762 Msa0448180:CDS
TCAATACTTCAAGGGATACG+TGG 0.666638 3_3:+27502599 Msa0448180:CDS
GATGCTAGATGACAAACTGA+GGG 0.668685 3_3:+27502575 Msa0448180:CDS
GGATACTCTCCATGATACAG+TGG 0.675370 3_3:-27500650 None:intergenic
GATGCCTTTACACACACTGA+AGG 0.682072 3_3:+27497635 Msa0448180:CDS
GAAGGTGCCAGCAATGAGGG+TGG 0.687908 3_3:+27497593 Msa0448180:CDS
AAGATCATACCCATTGACTG+CGG 0.693095 3_3:-27499545 None:intergenic
CATCTTGATGAGTCAATGGG+AGG 0.710481 3_3:+27498837 Msa0448180:CDS
CCAGCTTCCCAAATTCTCAG+AGG 0.712694 3_3:+27500700 Msa0448180:CDS
GATGCAGTGGAAGATCCCAA+TGG 0.714924 3_3:-27498818 None:intergenic
GCATACAGGCAGCATCAGAG+TGG 0.723690 3_3:+27501067 Msa0448180:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACACTTTTTTTTTAATAAAT+GGG - chr3_3:27494862-27494881 None:intergenic 10.0%
!!! AACACTTTTTTTTTAATAAA+TGG - chr3_3:27494863-27494882 None:intergenic 10.0%
!!! TTTTGTTTTTAGTTTTAAAT+TGG + chr3_3:27495512-27495531 Msa0448180:intron 10.0%
!! AAAATATAAAAGGATTAATA+TGG + chr3_3:27495897-27495916 Msa0448180:intron 10.0%
!! GATTAAATGTATAAATAAAG+AGG - chr3_3:27494996-27495015 None:intergenic 15.0%
!!! ATCAATCTATTTTTTTTGTA+AGG - chr3_3:27495622-27495641 None:intergenic 15.0%
!! ATAATAACTAGTTAAACATA+GGG - chr3_3:27496037-27496056 None:intergenic 15.0%
!! TTAAAACTTTCATATAATGT+GGG - chr3_3:27496356-27496375 None:intergenic 15.0%
!! ATTAAAACTTTCATATAATG+TGG - chr3_3:27496357-27496376 None:intergenic 15.0%
!! TAACAAAAAAAATCAATTTC+AGG - chr3_3:27496504-27496523 None:intergenic 15.0%
!! AAATTTATAATGAGTTCATT+TGG + chr3_3:27496804-27496823 Msa0448180:intron 15.0%
!! ATCATAGAATATCATAAAAA+TGG - chr3_3:27497427-27497446 None:intergenic 15.0%
!!! TTTTTATGATATTCTATGAT+TGG + chr3_3:27497427-27497446 Msa0448180:intron 15.0%
!!! TTATATTTTTGGATTGATTT+TGG + chr3_3:27497968-27497987 Msa0448180:intron 15.0%
!!! TATATTTTTGGATTGATTTT+GGG + chr3_3:27497969-27497988 Msa0448180:intron 15.0%
!! ATAGAAGAGATAAAAAATTA+AGG - chr3_3:27498739-27498758 None:intergenic 15.0%
!!! AAATCAATTTTTTCATTATC+AGG - chr3_3:27498942-27498961 None:intergenic 15.0%
!!! TCATAATTTTTATTTCTCTA+AGG + chr3_3:27499123-27499142 Msa0448180:intron 15.0%
!! AATTAAATAGAAAGACAAAA+TGG - chr3_3:27499308-27499327 None:intergenic 15.0%
!!! CTTTCTATTTAATTTGTTAT+AGG + chr3_3:27499314-27499333 Msa0448180:intron 15.0%
!! AATATCTATAACAAATGTAT+AGG - chr3_3:27500241-27500260 None:intergenic 15.0%
!!! ATTTATAACTTTTATATGAC+TGG + chr3_3:27502274-27502293 Msa0448180:intron 15.0%
!!! ATTTATAACTTTTATATGAC+TGG + chr3_3:27502274-27502293 Msa0448180:intron 15.0%
!! TAACCATAGTATATTTAAAA+AGG - chr3_3:27502748-27502767 None:intergenic 15.0%
!!! GACATTGTTATTATTTTTAA+AGG - chr3_3:27503013-27503032 None:intergenic 15.0%
!!! ATAAATAAGAGTATATGTTA+AGG - chr3_3:27503524-27503543 None:intergenic 15.0%
!! AAAGTGGAATATATTGAATT+GGG - chr3_3:27494973-27494992 None:intergenic 20.0%
!! TCAATTTAATCTCTAAACTA+TGG + chr3_3:27495374-27495393 Msa0448180:intron 20.0%
!!! AACAAGTTAGTTCTTTAATT+TGG - chr3_3:27495842-27495861 None:intergenic 20.0%
!! TATAAACATTAAGATGCATT+TGG + chr3_3:27495921-27495940 Msa0448180:intron 20.0%
!! GATAATAACTAGTTAAACAT+AGG - chr3_3:27496038-27496057 None:intergenic 20.0%
!!! TTTTGCTATCTTTTTTGTTA+TGG + chr3_3:27496605-27496624 Msa0448180:intron 20.0%
!!! TAATGTTGCTGTTTATTTTA+TGG + chr3_3:27496982-27497001 Msa0448180:intron 20.0%
!!! AATGTTGCTGTTTATTTTAT+GGG + chr3_3:27496983-27497002 Msa0448180:intron 20.0%
!!! TAATGTAATTCTTTTTCGAA+TGG - chr3_3:27497136-27497155 None:intergenic 20.0%
!!! AACAAGTTCAAAATTTTGAA+AGG - chr3_3:27497235-27497254 None:intergenic 20.0%
!!! TTTCAAAATTTTGAACTTGT+TGG + chr3_3:27497234-27497253 Msa0448180:intron 20.0%
!! ATTTAATCAGATAAACATTG+AGG + chr3_3:27497499-27497518 Msa0448180:intron 20.0%
!!! AGTCGTATGTATTATATTTT+TGG + chr3_3:27497957-27497976 Msa0448180:intron 20.0%
!!! TTAACTTTTTTATGCAACTT+TGG + chr3_3:27498215-27498234 Msa0448180:intron 20.0%
!! TTAATTAACAATGAACCATA+TGG - chr3_3:27498362-27498381 None:intergenic 20.0%
!!! CTGAAGAAAAAGATAATTTT+AGG + chr3_3:27498532-27498551 Msa0448180:intron 20.0%
!!! TTGTATGTTTTGTTTTGTAA+TGG + chr3_3:27498600-27498619 Msa0448180:intron 20.0%
!!! TTTTGTTTTGTAATGGTTTA+TGG + chr3_3:27498607-27498626 Msa0448180:intron 20.0%
!!! TTTGTTTTGTAATGGTTTAT+GGG + chr3_3:27498608-27498627 Msa0448180:intron 20.0%
!! GTTGAATAAAAAAATCATGT+AGG + chr3_3:27498863-27498882 Msa0448180:intron 20.0%
!!! GTAAGTTTAATTTTTCCATT+GGG - chr3_3:27499096-27499115 None:intergenic 20.0%
!!! TGTAAGTTTAATTTTTCCAT+TGG - chr3_3:27499097-27499116 None:intergenic 20.0%
!! AATATATATACGGTGTAATA+TGG - chr3_3:27499880-27499899 None:intergenic 20.0%
!!! TTATGAAAATCTTGTTTTGA+TGG + chr3_3:27500389-27500408 Msa0448180:intron 20.0%
!! TTGAATTCTTTAGACTTTAT+TGG + chr3_3:27500740-27500759 Msa0448180:CDS 20.0%
!! ATATATATATCAAGAACACT+GGG - chr3_3:27500994-27501013 None:intergenic 20.0%
!! TATATATATATCAAGAACAC+TGG - chr3_3:27500995-27501014 None:intergenic 20.0%
!! TATATCTTTATTGAAACTTC+TGG + chr3_3:27501226-27501245 Msa0448180:intron 20.0%
!! TATAATAGAACAGAATATGT+AGG - chr3_3:27501340-27501359 None:intergenic 20.0%
!! ACATATAATACACAATAGAA+GGG - chr3_3:27501423-27501442 None:intergenic 20.0%
!! AACATATAATACACAATAGA+AGG - chr3_3:27501424-27501443 None:intergenic 20.0%
!! TATGTTATTCAATATGTATG+TGG - chr3_3:27502187-27502206 None:intergenic 20.0%
!! TGAATAACATAAGAATTTGA+TGG + chr3_3:27502196-27502215 Msa0448180:intron 20.0%
!!! AGAACAACTTTATAATGTTT+TGG - chr3_3:27502301-27502320 None:intergenic 20.0%
!! TGAATAACATAAGAATTTGA+TGG + chr3_3:27502196-27502215 Msa0448180:intron 20.0%
!!! AGAACAACTTTATAATGTTT+TGG - chr3_3:27502301-27502320 None:intergenic 20.0%
!! CATAGTATATTTAAAAAGGA+GGG - chr3_3:27502744-27502763 None:intergenic 20.0%
!! ATTGAATAAAGTGAGTTATT+AGG - chr3_3:27502773-27502792 None:intergenic 20.0%
!! ATAACTCACTTTATTCAATA+TGG + chr3_3:27502774-27502793 Msa0448180:intron 20.0%
!! TAACTCACTTTATTCAATAT+GGG + chr3_3:27502775-27502794 Msa0448180:intron 20.0%
!! AAAAGAGACTAAAAAAATCA+AGG + chr3_3:27503052-27503071 Msa0448180:intron 20.0%
!! AAAGAGACTAAAAAAATCAA+GGG + chr3_3:27503053-27503072 Msa0448180:intron 20.0%
!! TAGTTTATCACTTTATCATT+TGG + chr3_3:27503586-27503605 Msa0448180:three_prime_UTR 20.0%
! GAAAGTGGAATATATTGAAT+TGG - chr3_3:27494974-27494993 None:intergenic 25.0%
! TGTATAAATAAAGAGGAAAG+TGG - chr3_3:27494989-27495008 None:intergenic 25.0%
!! TCTTTACCATTCTGAAAAAA+TGG - chr3_3:27495153-27495172 None:intergenic 25.0%
!!! AAAAGTGTTTTACAAAGTCA+AGG - chr3_3:27495476-27495495 None:intergenic 25.0%
!!! TAAATTGGTCTTTTTTTTCG+TGG + chr3_3:27495527-27495546 Msa0448180:intron 25.0%
!! TAAGAACTTTTTGACAAAGT+TGG + chr3_3:27495786-27495805 Msa0448180:intron 25.0%
! AATTTGGAAATTGTAACGAA+TGG - chr3_3:27495826-27495845 None:intergenic 25.0%
!!! TTCACTTTTACTGACATAAA+GGG + chr3_3:27495860-27495879 Msa0448180:intron 25.0%
!!! GCATTTGGCATATTTTTAAA+AGG + chr3_3:27495936-27495955 Msa0448180:intron 25.0%
! GTTGTTAAAATATAGACATC+CGG - chr3_3:27495998-27496017 None:intergenic 25.0%
! CTAATCGAATATGAATACAA+TGG - chr3_3:27496332-27496351 None:intergenic 25.0%
! AGTGAATGTTGAATCAAAAA+CGG - chr3_3:27496425-27496444 None:intergenic 25.0%
!! TGGTTTCAAAAACTTTTAAC+TGG + chr3_3:27496824-27496843 Msa0448180:intron 25.0%
!!! GTAGTTCTAAAGTTTTTACT+TGG + chr3_3:27497043-27497062 Msa0448180:intron 25.0%
! TAGATCATACTTGAATGTTT+AGG + chr3_3:27497079-27497098 Msa0448180:intron 25.0%
! AAATGAAGAACTGAAAAGTT+TGG - chr3_3:27497266-27497285 None:intergenic 25.0%
! GCTATAAATTGTAATCAACA+TGG + chr3_3:27497345-27497364 Msa0448180:intron 25.0%
! GAAATCGTATTTATAACAGA+TGG + chr3_3:27497521-27497540 Msa0448180:intron 25.0%
!! TTTGAGTAAATGATAGTGAA+GGG - chr3_3:27497696-27497715 None:intergenic 25.0%
!! ATTTGAGTAAATGATAGTGA+AGG - chr3_3:27497697-27497716 None:intergenic 25.0%
! TTCACTATCATTTACTCAAA+TGG + chr3_3:27497696-27497715 Msa0448180:intron 25.0%
! AAAATACTTGACAAAAGCAA+TGG + chr3_3:27497776-27497795 Msa0448180:CDS 25.0%
! ATAGTTATGCAAAAGAAAGA+TGG - chr3_3:27497872-27497891 None:intergenic 25.0%
!! ATATGCAATGATTCTTTTCA+AGG + chr3_3:27498011-27498030 Msa0448180:intron 25.0%
!! TATGCAATGATTCTTTTCAA+GGG + chr3_3:27498012-27498031 Msa0448180:intron 25.0%
! AAATATGAAATTTACGTGCT+CGG - chr3_3:27498196-27498215 None:intergenic 25.0%
!! CTTACAGATTTTCAATTTCT+TGG + chr3_3:27498282-27498301 Msa0448180:CDS 25.0%
! AAATATATATGCTCTCCATA+TGG + chr3_3:27498344-27498363 Msa0448180:intron 25.0%
! TGTCTACAAGAATTTATCAA+AGG + chr3_3:27498473-27498492 Msa0448180:intron 25.0%
! AAATTACTGTAAGTACAACA+GGG - chr3_3:27498582-27498601 None:intergenic 25.0%
! AAGGAGTAACTTAATATATC+CGG - chr3_3:27498765-27498784 None:intergenic 25.0%
! TTATGTAACTTTGTACCATT+GGG + chr3_3:27498803-27498822 Msa0448180:CDS 25.0%
!!! CTTGAAAGTATTAAAGGTTA+TGG + chr3_3:27498972-27498991 Msa0448180:intron 25.0%
! CAGTTGTATAAAAATGAAAG+TGG + chr3_3:27499054-27499073 Msa0448180:intron 25.0%
! TGTTAAAATAATACTCCCAA+TGG + chr3_3:27499078-27499097 Msa0448180:intron 25.0%
! AAATAGAAAGACAAAATGGT+GGG - chr3_3:27499304-27499323 None:intergenic 25.0%
! TAAATAGAAAGACAAAATGG+TGG - chr3_3:27499305-27499324 None:intergenic 25.0%
! CTTGATTTCTCTATTTGTTT+AGG + chr3_3:27499777-27499796 Msa0448180:intron 25.0%
!!! ACCTATCATAGATTTGTTAT+TGG + chr3_3:27499950-27499969 Msa0448180:intron 25.0%
!!! CCTATCATAGATTTGTTATT+GGG + chr3_3:27499951-27499970 Msa0448180:intron 25.0%
!!! AGTATGTCTTCATTATTTTG+TGG - chr3_3:27500514-27500533 None:intergenic 25.0%
! TCATGAGCATTAAAAAAAAC+TGG - chr3_3:27500540-27500559 None:intergenic 25.0%
!!! CGATAATATATTTTTAACCC+AGG + chr3_3:27500618-27500637 Msa0448180:intron 25.0%
! GAAAAATAGCTTAATCAACA+CGG - chr3_3:27500909-27500928 None:intergenic 25.0%
! TTTCCTTAGAGAAAACAAAT+AGG + chr3_3:27501190-27501209 Msa0448180:intron 25.0%
! TTCCTTAGAGAAAACAAATA+GGG + chr3_3:27501191-27501210 Msa0448180:intron 25.0%
! GTTTCAATAAAGATATATGC+TGG - chr3_3:27501223-27501242 None:intergenic 25.0%
!!! GATTTTGGTTCTACATAAAT+TGG - chr3_3:27501377-27501396 None:intergenic 25.0%
! CATATAATACACAATAGAAG+GGG - chr3_3:27501422-27501441 None:intergenic 25.0%
! TGTATTATATGTTCCAAACA+TGG + chr3_3:27501431-27501450 Msa0448180:intron 25.0%
! TATGAGAACAAGACATATAA+TGG - chr3_3:27501464-27501483 None:intergenic 25.0%
! GGAATATATGATCAAGATTA+TGG + chr3_3:27501580-27501599 Msa0448180:intron 25.0%
!! ATCAAGATTATGGATTACTA+AGG + chr3_3:27501590-27501609 Msa0448180:intron 25.0%
! AAATCAACTTCTTATTCACA+AGG - chr3_3:27501691-27501710 None:intergenic 25.0%
!!! GTATTTTAATCTTCCATGAT+CGG - chr3_3:27501976-27501995 None:intergenic 25.0%
! TAAAATACCAATTTCATTGC+AGG + chr3_3:27501988-27502007 Msa0448180:intron 25.0%
!!! CATTAGTTGATGATATAAAC+AGG - chr3_3:27502696-27502715 None:intergenic 25.0%
! CCATAGTATATTTAAAAAGG+AGG - chr3_3:27502745-27502764 None:intergenic 25.0%
!! CCTCCTTTTTAAATATACTA+TGG + chr3_3:27502742-27502761 Msa0448180:intron 25.0%
!! TGAAAGTTTAGAAACTTGTT+TGG + chr3_3:27502946-27502965 Msa0448180:intron 25.0%
!!! ATTTGGTAATGATGTGAAAT+TGG - chr3_3:27503087-27503106 None:intergenic 25.0%
! GTCTATGTAGATTACAAAAA+TGG + chr3_3:27503301-27503320 Msa0448180:CDS 25.0%
TAACATAAATGATGTGAGAG+AGG - chr3_3:27494815-27494834 None:intergenic 30.0%
! TTGAAATGACTCAGTTGTTT+TGG - chr3_3:27494886-27494905 None:intergenic 30.0%
AATATATTGAATTGGGAAGG+AGG - chr3_3:27494966-27494985 None:intergenic 30.0%
TGGAATATATTGAATTGGGA+AGG - chr3_3:27494969-27494988 None:intergenic 30.0%
! CCATTCTGAAAAAATGGAAA+TGG - chr3_3:27495147-27495166 None:intergenic 30.0%
!!! CCATTTCCATTTTTTCAGAA+TGG + chr3_3:27495144-27495163 Msa0448180:exon 30.0%
! ACTTTTCTAAGCGAATAAGT+GGG - chr3_3:27495578-27495597 None:intergenic 30.0%
TGTATGTAAGTAATCGCATT+TGG + chr3_3:27495716-27495735 Msa0448180:intron 30.0%
!! GTTCACTTTTACTGACATAA+AGG + chr3_3:27495859-27495878 Msa0448180:intron 30.0%
GTCTCTAACATACTCTTAAA+AGG + chr3_3:27496064-27496083 Msa0448180:intron 30.0%
AATAAAACTTGACCAAGTCA+GGG + chr3_3:27496096-27496115 Msa0448180:intron 30.0%
!!! GGCTTTTAAGTTCACTATTT+TGG - chr3_3:27496395-27496414 None:intergenic 30.0%
AATGTTGAATCAAAAACGGT+CGG - chr3_3:27496421-27496440 None:intergenic 30.0%
! GTGTTATTCAAACATATCCA+CGG + chr3_3:27496730-27496749 Msa0448180:intron 30.0%
TGGCTGAATATTATAAACGA+AGG - chr3_3:27496914-27496933 None:intergenic 30.0%
ATGTCAAGAATTGTTATCTG+AGG - chr3_3:27497200-27497219 None:intergenic 30.0%
AAGAACTGAAAAGTTTGGAT+CGG - chr3_3:27497261-27497280 None:intergenic 30.0%
!! AGAATTCTTGAGTTGATAGT+TGG + chr3_3:27497382-27497401 Msa0448180:intron 30.0%
TCTACGAACAATTTGTCAAA+AGG - chr3_3:27497474-27497493 None:intergenic 30.0%
!! GTTGCTTATTTCTAGATAGA+AGG + chr3_3:27497575-27497594 Msa0448180:intron 30.0%
!!! TGTGTGCTATTTGTTTTTGT+AGG + chr3_3:27497752-27497771 Msa0448180:intron 30.0%
GATCAGATACGTAGATTAAA+CGG - chr3_3:27497912-27497931 None:intergenic 30.0%
!! ACATTCTGTATGGAAGTATT+TGG - chr3_3:27498118-27498137 None:intergenic 30.0%
TTTATGCAACTTTGGTTAAC+AGG + chr3_3:27498223-27498242 Msa0448180:intron 30.0%
TATTGATCTTATAGCCAAGT+TGG + chr3_3:27498250-27498269 Msa0448180:CDS 30.0%
ATTGATCTTATAGCCAAGTT+GGG + chr3_3:27498251-27498270 Msa0448180:CDS 30.0%
ATTCACCACTAATAACATAC+CGG - chr3_3:27498321-27498340 None:intergenic 30.0%
AAATATTAATGACGAGACAG+AGG - chr3_3:27498432-27498451 None:intergenic 30.0%
TCATTAATATTTGCCTCTGT+TGG + chr3_3:27498440-27498459 Msa0448180:intron 30.0%
CAAATTACTGTAAGTACAAC+AGG - chr3_3:27498583-27498602 None:intergenic 30.0%
! ATTAATGCTCTTCTAGAAAG+AGG + chr3_3:27498689-27498708 Msa0448180:CDS 30.0%
! TTTTTATCTCTTCTATCGAC+CGG + chr3_3:27498743-27498762 Msa0448180:intron 30.0%
CAATGGTACAAAGTTACATA+AGG - chr3_3:27498804-27498823 None:intergenic 30.0%
CTTATGTAACTTTGTACCAT+TGG + chr3_3:27498802-27498821 Msa0448180:CDS 30.0%
!! GATGTGCTTGAAAGTATTAA+AGG + chr3_3:27498966-27498985 Msa0448180:intron 30.0%
TATTAAAGGTTATGGTGTAC+TGG + chr3_3:27498980-27498999 Msa0448180:intron 30.0%
TTATCCATGTTGAGCTAAAA+TGG + chr3_3:27499004-27499023 Msa0448180:intron 30.0%
TATCCATGTTGAGCTAAAAT+GGG + chr3_3:27499005-27499024 Msa0448180:intron 30.0%
CTTACATGAAGCGTATAATT+TGG - chr3_3:27499178-27499197 None:intergenic 30.0%
TCCAATATTCTATTACTGAG+TGG + chr3_3:27499408-27499427 Msa0448180:intron 30.0%
ACCACTCAGTAATAGAATAT+TGG - chr3_3:27499412-27499431 None:intergenic 30.0%
AAACGTGTATCCCTATAAAT+AGG + chr3_3:27499806-27499825 Msa0448180:intron 30.0%
AACGTGTATCCCTATAAATA+GGG + chr3_3:27499807-27499826 Msa0448180:intron 30.0%
CCCAATAACAAATCTATGAT+AGG - chr3_3:27499954-27499973 None:intergenic 30.0%
! AGATTTTGTCTCAATTTTCC+AGG + chr3_3:27500093-27500112 Msa0448180:intron 30.0%
TCTTCAATCTTATCAGAGTT+AGG - chr3_3:27500169-27500188 None:intergenic 30.0%
TATAAATGAATCAACACGTG+TGG + chr3_3:27500296-27500315 Msa0448180:intron 30.0%
ATCATACAGATTTCTCATGA+TGG - chr3_3:27500419-27500438 None:intergenic 30.0%
ATTGAAGTGATATCTAACCT+TGG + chr3_3:27500576-27500595 Msa0448180:intron 30.0%
GTCTAAATCACTATACAACA+AGG + chr3_3:27500762-27500781 Msa0448180:CDS 30.0%
!! CTATTTTTCCACAGTTGAAT+GGG + chr3_3:27500920-27500939 Msa0448180:intron 30.0%
!! ATCCCTATTTGTTTTCTCTA+AGG - chr3_3:27501196-27501215 None:intergenic 30.0%
!! TTTAGCTTTGCATAAAAGAC+TGG - chr3_3:27501301-27501320 None:intergenic 30.0%
TCTGTTCTATTATAGTCTCT+TGG + chr3_3:27501346-27501365 Msa0448180:intron 30.0%
!! TTTGGTTCTACATAAATTGG+TGG - chr3_3:27501374-27501393 None:intergenic 30.0%
! TAATGGTTCTTTTCCATGTT+TGG - chr3_3:27501447-27501466 None:intergenic 30.0%
TTGAGTGTCAAACAATTCTT+TGG - chr3_3:27501523-27501542 None:intergenic 30.0%
AATTACTCAAGCCAAAAAAG+TGG + chr3_3:27501549-27501568 Msa0448180:intron 30.0%
TCTTGATCATATATTCCTCT+TGG - chr3_3:27501577-27501596 None:intergenic 30.0%
AAAATCCCATACATCTAACA+TGG + chr3_3:27501636-27501655 Msa0448180:intron 30.0%
AAATCCCATACATCTAACAT+GGG + chr3_3:27501637-27501656 Msa0448180:intron 30.0%
TCAAGTGTTATACCTTGTAA+TGG + chr3_3:27501662-27501681 Msa0448180:intron 30.0%
CAAGTGTTATACCTTGTAAT+GGG + chr3_3:27501663-27501682 Msa0448180:intron 30.0%
!! TTAGTTTGTTCCCAGAAATA+AGG + chr3_3:27501730-27501749 Msa0448180:intron 30.0%
! TGATTTGTGTCCTTATTTCT+GGG - chr3_3:27501743-27501762 None:intergenic 30.0%
! ATGATTTGTGTCCTTATTTC+TGG - chr3_3:27501744-27501763 None:intergenic 30.0%
GGTATTGCTTGTATATATAG+AGG - chr3_3:27501821-27501840 None:intergenic 30.0%
GATATAAACAGGATTAACTC+AGG - chr3_3:27502685-27502704 None:intergenic 30.0%
TCATCAACTAATGAGTAATC+TGG + chr3_3:27502703-27502722 Msa0448180:intron 30.0%
GACGTATAGATAACAAACAA+GGG - chr3_3:27502844-27502863 None:intergenic 30.0%
AGACGTATAGATAACAAACA+AGG - chr3_3:27502845-27502864 None:intergenic 30.0%
! AAGTTTAGAAACTTGTTTGG+TGG + chr3_3:27502949-27502968 Msa0448180:intron 30.0%
! AGTTTAGAAACTTGTTTGGT+GGG + chr3_3:27502950-27502969 Msa0448180:intron 30.0%
AGTTAGTACACAAATACTTG+AGG - chr3_3:27502979-27502998 None:intergenic 30.0%
TCAAGTATTTGTGTACTAAC+TGG + chr3_3:27502978-27502997 Msa0448180:intron 30.0%
GTTCTGGTGAAAACATTATT+TGG - chr3_3:27503104-27503123 None:intergenic 30.0%
! ACTTTTAATCATAGCTGTTC+TGG - chr3_3:27503120-27503139 None:intergenic 30.0%
TGTATATTGTTTGAATGCAC+AGG + chr3_3:27503191-27503210 Msa0448180:intron 30.0%
GTATATTGTTTGAATGCACA+GGG + chr3_3:27503192-27503211 Msa0448180:intron 30.0%
! ATTACAAAAATGGACTCACT+AGG + chr3_3:27503311-27503330 Msa0448180:CDS 30.0%
TCATCATTATGTGTCTTACA+AGG + chr3_3:27503416-27503435 Msa0448180:three_prime_UTR 30.0%
! ATGTTTTGTGAAAGCTATAG+TGG + chr3_3:27503480-27503499 Msa0448180:three_prime_UTR 30.0%
AATAAATGGGTCAGATATCC+CGG - chr3_3:27494849-27494868 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG + chr3_3:27495013-27495032 Msa0448180:intron 35.0%
! TGGATCACTCAGTTACTTTA+CGG - chr3_3:27495127-27495146 None:intergenic 35.0%
! GAAGAGTTTCTGAGAGAAAA+CGG + chr3_3:27495175-27495194 Msa0448180:CDS 35.0%
! TGGATGTATTTTCGATGATC+TGG + chr3_3:27495394-27495413 Msa0448180:intron 35.0%
! CTTTTCTAAGCGAATAAGTG+GGG - chr3_3:27495577-27495596 None:intergenic 35.0%
! CACTTTTCTAAGCGAATAAG+TGG - chr3_3:27495579-27495598 None:intergenic 35.0%
AAAGTGAATTTATAGCCGCT+AGG + chr3_3:27495593-27495612 Msa0448180:intron 35.0%
!!! TTTTTTGTAAGGTAGCCTAG+CGG - chr3_3:27495611-27495630 None:intergenic 35.0%
ACCTTCCACTCAATGTTAAA+TGG + chr3_3:27495758-27495777 Msa0448180:intron 35.0%
ACCATTTAACATTGAGTGGA+AGG - chr3_3:27495762-27495781 None:intergenic 35.0%
GACAAAGTTGGATGAAAAAG+TGG + chr3_3:27495798-27495817 Msa0448180:intron 35.0%
CTGTCTCTATATTTATGCAC+CGG + chr3_3:27495976-27495995 Msa0448180:intron 35.0%
GAATAAAACTTGACCAAGTC+AGG + chr3_3:27496095-27496114 Msa0448180:intron 35.0%
TTTCAAAAAAGTCCCTGACT+TGG - chr3_3:27496111-27496130 None:intergenic 35.0%
! TCTATAGTTTGCGACCAAAT+AGG + chr3_3:27496214-27496233 Msa0448180:intron 35.0%
! AGAATGACGGTGTTAGTTTA+CGG + chr3_3:27496237-27496256 Msa0448180:intron 35.0%
TACGGACGAAATTGAGAAAA+TGG + chr3_3:27496255-27496274 Msa0448180:intron 35.0%
GTCAGAATATCTCAAACACA+GGG - chr3_3:27496284-27496303 None:intergenic 35.0%
TGTCAGAATATCTCAAACAC+AGG - chr3_3:27496285-27496304 None:intergenic 35.0%
ATGTTGAGTGCATGAATTGA+AGG + chr3_3:27496450-27496469 Msa0448180:intron 35.0%
ATGAATTGAAGGATCTGGAT+TGG + chr3_3:27496461-27496480 Msa0448180:intron 35.0%
TGAATTGAAGGATCTGGATT+GGG + chr3_3:27496462-27496481 Msa0448180:intron 35.0%
TGTTACACCTGAGAAATAGA+TGG + chr3_3:27496519-27496538 Msa0448180:intron 35.0%
AGCAAAAAGCAAAGAAGACA+AGG - chr3_3:27496592-27496611 None:intergenic 35.0%
!! TTTTGTTATGGCAGCTTTAG+TGG + chr3_3:27496617-27496636 Msa0448180:intron 35.0%
ATAGATAACATAGCAAACCG+TGG - chr3_3:27496750-27496769 None:intergenic 35.0%
!! TTTTAACTGGTGCTCTTACA+AGG + chr3_3:27496837-27496856 Msa0448180:intron 35.0%
! TTTTACTTGGACACCACTTT+TGG + chr3_3:27497056-27497075 Msa0448180:intron 35.0%
CAAGTATGATCTACCAAAAG+TGG - chr3_3:27497072-27497091 None:intergenic 35.0%
CAAGAGATAGACTAAAGAGT+AGG - chr3_3:27497293-27497312 None:intergenic 35.0%
ATTGTAATCAACATGGAAGC+AGG + chr3_3:27497352-27497371 Msa0448180:intron 35.0%
TTGTAATCAACATGGAAGCA+GGG + chr3_3:27497353-27497372 Msa0448180:intron 35.0%
TATTCTATGATTGGCATGCA+TGG + chr3_3:27497436-27497455 Msa0448180:intron 35.0%
TAGCAGTTGATCACTATCAT+CGG + chr3_3:27497804-27497823 Msa0448180:CDS 35.0%
TGATCACTATCATCGGTATT+TGG + chr3_3:27497811-27497830 Msa0448180:CDS 35.0%
!! AATGATTCTTTTCAAGGGAC+TGG + chr3_3:27498017-27498036 Msa0448180:intron 35.0%
!! GAAGTATTTGGCTTGAAAGA+GGG - chr3_3:27498106-27498125 None:intergenic 35.0%
ACTCAGTATGACATTCTGTA+TGG - chr3_3:27498128-27498147 None:intergenic 35.0%
TTCACCACTAATAACATACC+GGG - chr3_3:27498320-27498339 None:intergenic 35.0%
AGAGGAATTGATATAGCTTC+AGG - chr3_3:27498414-27498433 None:intergenic 35.0%
TAATGGTTTATGGGTGTAGA+TGG + chr3_3:27498617-27498636 Msa0448180:intron 35.0%
GAACCAAAGTCAATGATGAA+GGG + chr3_3:27498645-27498664 Msa0448180:CDS 35.0%
!! TATCCCTTCATCATTGACTT+TGG - chr3_3:27498651-27498670 None:intergenic 35.0%
GTGAGTATACACAAAACTGT+TGG - chr3_3:27499202-27499221 None:intergenic 35.0%
TTTGTGTATACTCACTCGAA+TGG + chr3_3:27499207-27499226 Msa0448180:intron 35.0%
!! GAAACTTGCTTTGCAAGTTT+TGG + chr3_3:27499478-27499497 Msa0448180:CDS 35.0%
! GATCTATTTTCACATCTTCC+AGG - chr3_3:27499583-27499602 None:intergenic 35.0%
ACGTGTATCCCTATAAATAG+GGG + chr3_3:27499808-27499827 Msa0448180:intron 35.0%
ACACTAACCCCCTATTTATA+GGG - chr3_3:27499819-27499838 None:intergenic 35.0%
AACACTAACCCCCTATTTAT+AGG - chr3_3:27499820-27499839 None:intergenic 35.0%
! TCAATTTTCCAGGATAAGCA+AGG + chr3_3:27500103-27500122 Msa0448180:intron 35.0%
! CAATTTTCCAGGATAAGCAA+GGG + chr3_3:27500104-27500123 Msa0448180:intron 35.0%
! AATTTTCCAGGATAAGCAAG+GGG + chr3_3:27500105-27500124 Msa0448180:intron 35.0%
TGAGAATATATCAGCCAAAG+TGG - chr3_3:27500348-27500367 None:intergenic 35.0%
! TTATCCTCCTCTGAGAATTT+GGG - chr3_3:27500710-27500729 None:intergenic 35.0%
! TTTATCCTCCTCTGAGAATT+TGG - chr3_3:27500711-27500730 None:intergenic 35.0%
ATTTCACATGTGACAGAATC+TGG + chr3_3:27500788-27500807 Msa0448180:CDS 35.0%
AAGTTATTACTACAACGCAC+AGG + chr3_3:27500814-27500833 Msa0448180:CDS 35.0%
!!! GCTATTTTTCCACAGTTGAA+TGG + chr3_3:27500919-27500938 Msa0448180:intron 35.0%
! GTTTTATGTTGTGTGCATAC+AGG + chr3_3:27501053-27501072 Msa0448180:intron 35.0%
TTATTGAAACTTCTGGTGTG+TGG + chr3_3:27501233-27501252 Msa0448180:intron 35.0%
!! GTAAGAAAGGTGATCGATTT+TGG - chr3_3:27501392-27501411 None:intergenic 35.0%
!! TGGTGCTATTACACAATCAA+AGG - chr3_3:27501503-27501522 None:intergenic 35.0%
!! ATGTATGGGATTTTGATGCA+GGG - chr3_3:27501630-27501649 None:intergenic 35.0%
AATCCCATACATCTAACATG+GGG + chr3_3:27501638-27501657 Msa0448180:intron 35.0%
TAGAGGTTACAAGACTATAC+AGG - chr3_3:27501804-27501823 None:intergenic 35.0%
CTAGACAATGTCTTTCTCAT+TGG - chr3_3:27501842-27501861 None:intergenic 35.0%
CAATGAGAAAGACATTGTCT+AGG + chr3_3:27501840-27501859 Msa0448180:intron 35.0%
GTTTCCTTGAGAGTAGTTAA+GGG - chr3_3:27501909-27501928 None:intergenic 35.0%
!! ATGCTTTAAAAGCGCTACTA+AGG - chr3_3:27502078-27502097 None:intergenic 35.0%
!!! TTAGTAGCGCTTTTAAAGCA+TGG + chr3_3:27502077-27502096 Msa0448180:intron 35.0%
!!! TAGTAGCGCTTTTAAAGCAT+GGG + chr3_3:27502078-27502097 Msa0448180:intron 35.0%
GGAAAAACCTGAAAAATCTC+AGG + chr3_3:27502117-27502136 Msa0448180:intron 35.0%
TAAAGTTGTTCTCATCTCTC+AGG + chr3_3:27502309-27502328 Msa0448180:intron 35.0%
AAAGTTGTTCTCATCTCTCA+GGG + chr3_3:27502310-27502329 Msa0448180:intron 35.0%
TAAAGTTGTTCTCATCTCTC+AGG + chr3_3:27502309-27502328 Msa0448180:intron 35.0%
AAAGTTGTTCTCATCTCTCA+GGG + chr3_3:27502310-27502329 Msa0448180:intron 35.0%
TCATCTAGCATCTCATGTAA+TGG - chr3_3:27502567-27502586 None:intergenic 35.0%
ATAAACAGGATTAACTCAGG+TGG - chr3_3:27502682-27502701 None:intergenic 35.0%
! GTTTAGAAACTTGTTTGGTG+GGG + chr3_3:27502951-27502970 Msa0448180:intron 35.0%
AACAATGTCTATCTCCATAC+AGG + chr3_3:27503024-27503043 Msa0448180:intron 35.0%
!!! GTCTCTTTTGAAATCCTGTA+TGG - chr3_3:27503041-27503060 None:intergenic 35.0%
ATACTTTGCATGGTCATTAC+TGG + chr3_3:27503234-27503253 Msa0448180:CDS 35.0%
ATTACTGGACAACTTCGAAT+GGG + chr3_3:27503249-27503268 Msa0448180:CDS 35.0%
ACCAATATGCAGAAGACTTT+GGG - chr3_3:27503339-27503358 None:intergenic 35.0%
AACCAATATGCAGAAGACTT+TGG - chr3_3:27503340-27503359 None:intergenic 35.0%
AAAGATGGGACAAACAAGAA+GGG + chr3_3:27503373-27503392 Msa0448180:CDS 35.0%
AATGACAGAAGTTCTTGTTC+TGG - chr3_3:27503454-27503473 None:intergenic 35.0%
GTGAGAGAGGATCTATCATA+TGG - chr3_3:27494802-27494821 None:intergenic 40.0%
TTATGTTACTCCATTCGTCC+CGG + chr3_3:27494827-27494846 Msa0448180:intron 40.0%
ATAAATGGGTCAGATATCCC+GGG - chr3_3:27494848-27494867 None:intergenic 40.0%
!!! GTCTTTTTTTTCGTGGTGTC+CGG + chr3_3:27495534-27495553 Msa0448180:intron 40.0%
!!! TCTTTTTTTTCGTGGTGTCC+GGG + chr3_3:27495535-27495554 Msa0448180:intron 40.0%
CACGACCATTTAACATTGAG+TGG - chr3_3:27495766-27495785 None:intergenic 40.0%
! TGAGAGCACATTACAAAGTG+AGG + chr3_3:27496155-27496174 Msa0448180:intron 40.0%
! GAGAGCACATTACAAAGTGA+GGG + chr3_3:27496156-27496175 Msa0448180:intron 40.0%
AGAGCACATTACAAAGTGAG+GGG + chr3_3:27496157-27496176 Msa0448180:intron 40.0%
! AAAGTGAGGGGCTAATTTGT+TGG + chr3_3:27496169-27496188 Msa0448180:intron 40.0%
AACACCGTCATTCTCCTATT+TGG - chr3_3:27496231-27496250 None:intergenic 40.0%
TATTCTGACATTTGCGCAGA+CGG + chr3_3:27496295-27496314 Msa0448180:intron 40.0%
TGAATCAAAAACGGTCGGTT+CGG - chr3_3:27496416-27496435 None:intergenic 40.0%
AGTGCATGAATTGAAGGATC+TGG + chr3_3:27496456-27496475 Msa0448180:intron 40.0%
GAATTGAAGGATCTGGATTG+GGG + chr3_3:27496463-27496482 Msa0448180:intron 40.0%
! CTGCAAACCATCTATTTCTC+AGG - chr3_3:27496529-27496548 None:intergenic 40.0%
! CATGCAACAAAGTTGATCCA+GGG - chr3_3:27496948-27496967 None:intergenic 40.0%
! TCATGCAACAAAGTTGATCC+AGG - chr3_3:27496949-27496968 None:intergenic 40.0%
TGGTAGAGGTCCTTGTATAT+GGG + chr3_3:27497613-27497632 Msa0448180:CDS 40.0%
!! GTAAAGGCATCCCATATACA+AGG - chr3_3:27497626-27497645 None:intergenic 40.0%
TACAAAGACGTTTCCTCACT+TGG - chr3_3:27497938-27497957 None:intergenic 40.0%
!! GGAAGTATTTGGCTTGAAAG+AGG - chr3_3:27498107-27498126 None:intergenic 40.0%
TTTCCCCGGTATGTTATTAG+TGG + chr3_3:27498313-27498332 Msa0448180:intron 40.0%
TCACCACTAATAACATACCG+GGG - chr3_3:27498319-27498338 None:intergenic 40.0%
ACAAATTTACGAGCCAACAG+AGG - chr3_3:27498456-27498475 None:intergenic 40.0%
AGGCTTGATTAAGTCTTTCC+CGG + chr3_3:27498493-27498512 Msa0448180:intron 40.0%
TTTATGGGTGTAGATGGCTT+AGG + chr3_3:27498623-27498642 Msa0448180:intron 40.0%
GGAACCAAAGTCAATGATGA+AGG + chr3_3:27498644-27498663 Msa0448180:CDS 40.0%
TTAAGTTACTCCTTTCCAGC+AGG + chr3_3:27498771-27498790 Msa0448180:intron 40.0%
ACATAAGGTTGAATACCTGC+TGG - chr3_3:27498789-27498808 None:intergenic 40.0%
! ATTGACTCATCAAGATGCAG+TGG - chr3_3:27498834-27498853 None:intergenic 40.0%
ACTGCATCTTGATGAGTCAA+TGG + chr3_3:27498833-27498852 Msa0448180:CDS 40.0%
CTGCATCTTGATGAGTCAAT+GGG + chr3_3:27498834-27498853 Msa0448180:CDS 40.0%
!!! TCACCCATTTTAGCTCAACA+TGG - chr3_3:27499011-27499030 None:intergenic 40.0%
CTCTGTGACACTATAGTACA+AGG - chr3_3:27499233-27499252 None:intergenic 40.0%
AGCATGAGCAGAATCAAACT+TGG - chr3_3:27499278-27499297 None:intergenic 40.0%
! TTGGTGATAGAGTGAAGAAC+TGG + chr3_3:27499497-27499516 Msa0448180:CDS 40.0%
! AAGATCATACCCATTGACTG+CGG - chr3_3:27499548-27499567 None:intergenic 40.0%
! GATCTTGGAATTTTTGCTCC+TGG + chr3_3:27499562-27499581 Msa0448180:CDS 40.0%
! TGATGATGTGCTGCTAAGTA+TGG - chr3_3:27499613-27499632 None:intergenic 40.0%
AGCAGCACATCATCAAATCT+TGG + chr3_3:27499618-27499637 Msa0448180:intron 40.0%
CTTGTACTTGCTTCGGTAAA+TGG - chr3_3:27499662-27499681 None:intergenic 40.0%
CATTTACCGAAGCAAGTACA+AGG + chr3_3:27499660-27499679 Msa0448180:intron 40.0%
GTTTGACCTTGTACTTGCTT+CGG - chr3_3:27499669-27499688 None:intergenic 40.0%
CGTGTATCCCTATAAATAGG+GGG + chr3_3:27499809-27499828 Msa0448180:intron 40.0%
TTTCGTGCGTGGACAAATAT+GGG - chr3_3:27499980-27499999 None:intergenic 40.0%
TCTTACTTCACGTATTGTGC+AGG - chr3_3:27500059-27500078 None:intergenic 40.0%
! ATTTTCCAGGATAAGCAAGG+GGG + chr3_3:27500106-27500125 Msa0448180:intron 40.0%
! AGACGCCTAGATTTTCAGAT+TGG + chr3_3:27500205-27500224 Msa0448180:CDS 40.0%
ACCAGCCAATCTGAAAATCT+AGG - chr3_3:27500213-27500232 None:intergenic 40.0%
ACAACGTATACAGACCACTT+TGG + chr3_3:27500331-27500350 Msa0448180:intron 40.0%
ACTCAAATCAGCAAAATGCG+TGG + chr3_3:27500442-27500461 Msa0448180:intron 40.0%
CTCAAATCAGCAAAATGCGT+GGG + chr3_3:27500443-27500462 Msa0448180:intron 40.0%
TTCTTGCATCCACTGTATCA+TGG + chr3_3:27500641-27500660 Msa0448180:CDS 40.0%
TCAACACGGAAAGTTCACTT+TGG - chr3_3:27500895-27500914 None:intergenic 40.0%
ATATCAAGAACACTGGGAGA+GGG - chr3_3:27500988-27501007 None:intergenic 40.0%
TATATCAAGAACACTGGGAG+AGG - chr3_3:27500989-27501008 None:intergenic 40.0%
AGTGGCTATATGTTGTTCCT+TGG + chr3_3:27501085-27501104 Msa0448180:CDS 40.0%
GTGGCTATATGTTGTTCCTT+GGG + chr3_3:27501086-27501105 Msa0448180:CDS 40.0%
TGGCTATATGTTGTTCCTTG+GGG + chr3_3:27501087-27501106 Msa0448180:CDS 40.0%
GTTCTCTGTGACGTAAATAG+GGG - chr3_3:27501154-27501173 None:intergenic 40.0%
CGTTCTCTGTGACGTAAATA+GGG - chr3_3:27501155-27501174 None:intergenic 40.0%
CCTATTTACGTCACAGAGAA+CGG + chr3_3:27501153-27501172 Msa0448180:CDS 40.0%
TGTGTGGCATGCAAATAGAA+TGG + chr3_3:27501249-27501268 Msa0448180:intron 40.0%
ACAGTACTGCATGTTCTGTT+TGG + chr3_3:27501273-27501292 Msa0448180:intron 40.0%
AAGGGGTCAAAAGGTAAGAA+AGG - chr3_3:27501405-27501424 None:intergenic 40.0%
ACACAATAGAAGGGGTCAAA+AGG - chr3_3:27501414-27501433 None:intergenic 40.0%
!! GATGTATGGGATTTTGATGC+AGG - chr3_3:27501631-27501650 None:intergenic 40.0%
TTCACAAGGATCCCATTACA+AGG - chr3_3:27501677-27501696 None:intergenic 40.0%
TAGTCCCTTAACTACTCTCA+AGG + chr3_3:27501902-27501921 Msa0448180:intron 40.0%
GGTTTCCTTGAGAGTAGTTA+AGG - chr3_3:27501910-27501929 None:intergenic 40.0%
ATAGCAACACCAACATTGCA+GGG - chr3_3:27501931-27501950 None:intergenic 40.0%
TTATTGCAACTGACCGATCA+TGG + chr3_3:27501960-27501979 Msa0448180:intron 40.0%
GTTTGAGCCTGCAATGAAAT+TGG - chr3_3:27501998-27502017 None:intergenic 40.0%
CTCAAACACCATCATGTGTT+GGG + chr3_3:27502011-27502030 Msa0448180:intron 40.0%
! ATGGGTAGGGAATTCTAAGA+CGG + chr3_3:27502096-27502115 Msa0448180:intron 40.0%
! TGCTTGTCCTGAGATTTTTC+AGG - chr3_3:27502127-27502146 None:intergenic 40.0%
GAAAAATCTCAGGACAAGCA+AGG + chr3_3:27502127-27502146 Msa0448180:intron 40.0%
GTTTCACTCTATCGTTCACA+TGG - chr3_3:27502160-27502179 None:intergenic 40.0%
AAGTTGTTCTCATCTCTCAG+GGG + chr3_3:27502311-27502330 Msa0448180:intron 40.0%
GTCTTTCCATTTGACAGGTA+TGG + chr3_3:27502336-27502355 Msa0448180:intron 40.0%
CATCATCCATACCTGTCAAA+TGG - chr3_3:27502345-27502364 None:intergenic 40.0%
AAGTTGTTCTCATCTCTCAG+GGG + chr3_3:27502311-27502330 Msa0448180:intron 40.0%
GTCTTTCCATTTGACAGGTA+TGG + chr3_3:27502336-27502355 Msa0448180:intron 40.0%
CATCATCCATACCTGTCAAA+TGG - chr3_3:27502345-27502364 None:intergenic 40.0%
AGATGCTAGATGACAAACTG+AGG + chr3_3:27502574-27502593 Msa0448180:CDS 40.0%
GATGCTAGATGACAAACTGA+GGG + chr3_3:27502575-27502594 Msa0448180:CDS 40.0%
ACTGAGGGTTCAATACTTCA+AGG + chr3_3:27502590-27502609 Msa0448180:CDS 40.0%
CTGAGGGTTCAATACTTCAA+GGG + chr3_3:27502591-27502610 Msa0448180:CDS 40.0%
TCAATACTTCAAGGGATACG+TGG + chr3_3:27502599-27502618 Msa0448180:CDS 40.0%
GTGTGTGAAGAAAGTCAAAG+GGG - chr3_3:27502656-27502675 None:intergenic 40.0%
CGTGTGTGAAGAAAGTCAAA+GGG - chr3_3:27502657-27502676 None:intergenic 40.0%
TCGTGTGTGAAGAAAGTCAA+AGG - chr3_3:27502658-27502677 None:intergenic 40.0%
ACTTCAGCATGCAAGAAAAG+AGG - chr3_3:27502810-27502829 None:intergenic 40.0%
ATTGTTTGAATGCACAGGGA+TGG + chr3_3:27503196-27503215 Msa0448180:intron 40.0%
ATGTGAGAGGATACTTTGCA+TGG + chr3_3:27503224-27503243 Msa0448180:CDS 40.0%
CATTACTGGACAACTTCGAA+TGG + chr3_3:27503248-27503267 Msa0448180:CDS 40.0%
CAAGGTTATACCAAACGCTT+CGG + chr3_3:27503274-27503293 Msa0448180:CDS 40.0%
TTATACCAAACGCTTCGGAT+TGG + chr3_3:27503279-27503298 Msa0448180:CDS 40.0%
ACCCAAAGTCTTCTGCATAT+TGG + chr3_3:27503335-27503354 Msa0448180:CDS 40.0%
!!! CTTCTGCATATTGGTTTTCG+CGG + chr3_3:27503344-27503363 Msa0448180:CDS 40.0%
!! TTTTCGCGGTTTCTGAAAGA+TGG + chr3_3:27503358-27503377 Msa0448180:CDS 40.0%
! TTTCGCGGTTTCTGAAAGAT+GGG + chr3_3:27503359-27503378 Msa0448180:CDS 40.0%
GAAAGATGGGACAAACAAGA+AGG + chr3_3:27503372-27503391 Msa0448180:CDS 40.0%
TATGTTACTCCATTCGTCCC+GGG + chr3_3:27494828-27494847 Msa0448180:intron 45.0%
! CCAAACTGGCTCAGATATTC+CGG + chr3_3:27495027-27495046 Msa0448180:intron 45.0%
! CAAACTGGCTCAGATATTCC+GGG + chr3_3:27495028-27495047 Msa0448180:intron 45.0%
ATGAATTACTCCCTCAGTCC+CGG - chr3_3:27495049-27495068 None:intergenic 45.0%
GAGACAGTGTACCTGATAAG+CGG - chr3_3:27495269-27495288 None:intergenic 45.0%
GCGACCAAATAGGAGAATGA+CGG + chr3_3:27496224-27496243 Msa0448180:intron 45.0%
GATCCAGGGAAAGTTCTCTT+TGG - chr3_3:27496934-27496953 None:intergenic 45.0%
!! ATAGAAGGTGCCAGCAATGA+GGG + chr3_3:27497590-27497609 Msa0448180:CDS 45.0%
GTGGTAGAGGTCCTTGTATA+TGG + chr3_3:27497612-27497631 Msa0448180:CDS 45.0%
GATGCCTTTACACACACTGA+AGG + chr3_3:27497635-27497654 Msa0448180:CDS 45.0%
CACACCTTCAGTGTGTGTAA+AGG - chr3_3:27497642-27497661 None:intergenic 45.0%
GTATCTGATCCTACCAAGTG+AGG + chr3_3:27497922-27497941 Msa0448180:intron 45.0%
AAGACGTTTCCTCACTTGGT+AGG - chr3_3:27497934-27497953 None:intergenic 45.0%
GTAAGCGCTAAAACCCAACT+TGG - chr3_3:27498267-27498286 None:intergenic 45.0%
! TCTTGGTCTCGTATTTTCCC+CGG + chr3_3:27498299-27498318 Msa0448180:CDS 45.0%
GGCTTGATTAAGTCTTTCCC+GGG + chr3_3:27498494-27498513 Msa0448180:intron 45.0%
TTGATTAAGTCTTTCCCGGG+AGG + chr3_3:27498497-27498516 Msa0448180:intron 45.0%
TGATTAAGTCTTTCCCGGGA+GGG + chr3_3:27498498-27498517 Msa0448180:intron 45.0%
AGGTTGAATACCTGCTGGAA+AGG - chr3_3:27498784-27498803 None:intergenic 45.0%
CATCTTGATGAGTCAATGGG+AGG + chr3_3:27498837-27498856 Msa0448180:CDS 45.0%
TTGATGAGTCAATGGGAGGA+TGG + chr3_3:27498841-27498860 Msa0448180:CDS 45.0%
TAGTGTCACAGAGCTTCCTT+AGG + chr3_3:27499240-27499259 Msa0448180:intron 45.0%
TTGGCATCAGATGCTTCCTA+AGG - chr3_3:27499259-27499278 None:intergenic 45.0%
GTGTGTTCATATGTTGCGTG+TGG + chr3_3:27499430-27499449 Msa0448180:intron 45.0%
GCAGTCAATGGGTATGATCT+TGG + chr3_3:27499547-27499566 Msa0448180:CDS 45.0%
GTTTCGTGCGTGGACAAATA+TGG - chr3_3:27499981-27500000 None:intergenic 45.0%
AGGATTGAATGTTTCGTGCG+TGG - chr3_3:27499991-27500010 None:intergenic 45.0%
CGCACGAAACATTCAATCCT+AGG + chr3_3:27499991-27500010 Msa0448180:intron 45.0%
TTCAATCCTAGGCATGAGAG+TGG + chr3_3:27500002-27500021 Msa0448180:intron 45.0%
TAAACACCACTCTCATGCCT+AGG - chr3_3:27500011-27500030 None:intergenic 45.0%
CTTATAAGGACCAGGGATGT+GGG - chr3_3:27500035-27500054 None:intergenic 45.0%
! CGTATTGTGCAGGCCTTATA+AGG - chr3_3:27500049-27500068 None:intergenic 45.0%
! GCCTAGATTTTCAGATTGGC+TGG + chr3_3:27500209-27500228 Msa0448180:CDS 45.0%
ATCAGCAAAATGCGTGGGTT+TGG + chr3_3:27500448-27500467 Msa0448180:intron 45.0%
TCAGCAAAATGCGTGGGTTT+GGG + chr3_3:27500449-27500468 Msa0448180:intron 45.0%
TAAGCATGCATCTTACGCCA+AGG - chr3_3:27500596-27500615 None:intergenic 45.0%
TACAGTGGATGCAAGAACCT+GGG - chr3_3:27500638-27500657 None:intergenic 45.0%
ATACAGTGGATGCAAGAACC+TGG - chr3_3:27500639-27500658 None:intergenic 45.0%
GGATACTCTCCATGATACAG+TGG - chr3_3:27500653-27500672 None:intergenic 45.0%
AGTCGTTCACGCATAGTTTC+AGG - chr3_3:27500674-27500693 None:intergenic 45.0%
GAAACTATGCGTGAACGACT+TGG + chr3_3:27500674-27500693 Msa0448180:CDS 45.0%
TCCACAGTTGAATGGGAAGA+TGG + chr3_3:27500927-27500946 Msa0448180:intron 45.0%
ACCATCTTCCCATTCAACTG+TGG - chr3_3:27500931-27500950 None:intergenic 45.0%
TATCAAGAACACTGGGAGAG+GGG - chr3_3:27500987-27501006 None:intergenic 45.0%
ATGTTGTTCCTTGGGGTCTT+CGG + chr3_3:27501094-27501113 Msa0448180:CDS 45.0%
CCGTTCTCTGTGACGTAAAT+AGG - chr3_3:27501156-27501175 None:intergenic 45.0%
!!! TCCTCTTGGAGCCACTTTTT+TGG - chr3_3:27501563-27501582 None:intergenic 45.0%
GAGCCCCATGTTAGATGTAT+GGG - chr3_3:27501644-27501663 None:intergenic 45.0%
TGAGCCCCATGTTAGATGTA+TGG - chr3_3:27501645-27501664 None:intergenic 45.0%
TGTCTAGGTGACTCCATACT+TGG + chr3_3:27501855-27501874 Msa0448180:intron 45.0%
TCCATACTTGGCATCCAGTT+TGG + chr3_3:27501867-27501886 Msa0448180:intron 45.0%
TCAAGGAAACCCTGCAATGT+TGG + chr3_3:27501919-27501938 Msa0448180:intron 45.0%
GATAGCAACACCAACATTGC+AGG - chr3_3:27501932-27501951 None:intergenic 45.0%
GCTCAAACACCATCATGTGT+TGG + chr3_3:27502010-27502029 Msa0448180:intron 45.0%
ACCATCATGTGTTGGGTATG+AGG + chr3_3:27502018-27502037 Msa0448180:intron 45.0%
CCATCATGTGTTGGGTATGA+GGG + chr3_3:27502019-27502038 Msa0448180:intron 45.0%
CATCATGTGTTGGGTATGAG+GGG + chr3_3:27502020-27502039 Msa0448180:intron 45.0%
TCCCACATTGCCTAGAGATA+TGG + chr3_3:27502052-27502071 Msa0448180:intron 45.0%
GCCATATCTCTAGGCAATGT+GGG - chr3_3:27502056-27502075 None:intergenic 45.0%
GCTACTAAGGCCATATCTCT+AGG - chr3_3:27502065-27502084 None:intergenic 45.0%
!!! AGCGCTTTTAAAGCATGGGT+AGG + chr3_3:27502082-27502101 Msa0448180:intron 45.0%
!!! GCGCTTTTAAAGCATGGGTA+GGG + chr3_3:27502083-27502102 Msa0448180:intron 45.0%
GGGTTGTCTTTCCATTTGAC+AGG + chr3_3:27502331-27502350 Msa0448180:intron 45.0%
GGGTTGTCTTTCCATTTGAC+AGG + chr3_3:27502331-27502350 Msa0448180:intron 45.0%
! ATAGACCAATCCGAAGCGTT+TGG - chr3_3:27503287-27503306 None:intergenic 45.0%
!!! TTATATTTTTAATTTCAAAT+TGG - chr3_3:27495886-27495905 None:intergenic 5.0%
!!! TTTGAAATTAAAAATATAAA+AGG + chr3_3:27495887-27495906 Msa0448180:intron 5.0%
!! AATAAAATGAAATATATATA+CGG - chr3_3:27499890-27499909 None:intergenic 5.0%
!! ACAAAAAAAAAAAAAAAAAA+AGG - chr3_3:27500481-27500500 None:intergenic 5.0%
!! ATATATATATATTATATACA+AGG + chr3_3:27501018-27501037 Msa0448180:intron 5.0%
CCGGAATATCTGAGCCAGTT+TGG - chr3_3:27495030-27495049 None:intergenic 50.0%
CTCAGATATTCCGGGACTGA+GGG + chr3_3:27495036-27495055 Msa0448180:intron 50.0%
TTCCCTTCCGACTTCGTCTT+CGG + chr3_3:27495232-27495251 Msa0448180:CDS 50.0%
GTGTACCTGATAAGCGGAAG+TGG - chr3_3:27495263-27495282 None:intergenic 50.0%
GGTGTGTAGGGTTCAAAACC+CGG - chr3_3:27495556-27495575 None:intergenic 50.0%
GCGAATAAGTGGGGTGTGTA+GGG - chr3_3:27495568-27495587 None:intergenic 50.0%
AGCGAATAAGTGGGGTGTGT+AGG - chr3_3:27495569-27495588 None:intergenic 50.0%
CAGCCAAAGAGAACTTTCCC+TGG + chr3_3:27496928-27496947 Msa0448180:intron 50.0%
!! GATAGAAGGTGCCAGCAATG+AGG + chr3_3:27497589-27497608 Msa0448180:intron 50.0%
GCTTCATGATCTCGTGGACA+CGG - chr3_3:27498392-27498411 None:intergenic 50.0%
CTTCAGGCTTCATGATCTCG+TGG - chr3_3:27498398-27498417 None:intergenic 50.0%
GATGCAGTGGAAGATCCCAA+TGG - chr3_3:27498821-27498840 None:intergenic 50.0%
! CCATTGACTGCGGTTTGAAG+GGG - chr3_3:27499538-27499557 None:intergenic 50.0%
! CCCATTGACTGCGGTTTGAA+GGG - chr3_3:27499539-27499558 None:intergenic 50.0%
CCCTTCAAACCGCAGTCAAT+GGG + chr3_3:27499536-27499555 Msa0448180:CDS 50.0%
! ACCCATTGACTGCGGTTTGA+AGG - chr3_3:27499540-27499559 None:intergenic 50.0%
TGGTGTTTATCCCACATCCC+TGG + chr3_3:27500022-27500041 Msa0448180:intron 50.0%
CCTTATAAGGACCAGGGATG+TGG - chr3_3:27500036-27500055 None:intergenic 50.0%
CCACATCCCTGGTCCTTATA+AGG + chr3_3:27500033-27500052 Msa0448180:intron 50.0%
! TGCAGGCCTTATAAGGACCA+GGG - chr3_3:27500042-27500061 None:intergenic 50.0%
GATAAGCAAGGGGGACAAGT+GGG + chr3_3:27500115-27500134 Msa0448180:CDS 50.0%
ATAAGCAAGGGGGACAAGTG+GGG + chr3_3:27500116-27500135 Msa0448180:CDS 50.0%
! GGCTGGTTGTAGACTGTGAA+TGG + chr3_3:27500137-27500156 Msa0448180:CDS 50.0%
! CCTCTGAGAATTTGGGAAGC+TGG - chr3_3:27500703-27500722 None:intergenic 50.0%
CCAGCTTCCCAAATTCTCAG+AGG + chr3_3:27500700-27500719 Msa0448180:CDS 50.0%
GCTTCCCAAATTCTCAGAGG+AGG + chr3_3:27500703-27500722 Msa0448180:CDS 50.0%
TTACTACAACGCACAGGCGA+TGG + chr3_3:27500820-27500839 Msa0448180:CDS 50.0%
TGGGAAGATGGTCAGCTCAT+TGG + chr3_3:27500939-27500958 Msa0448180:CDS 50.0%
TGGTCAGCTCATTGGTGAGA+AGG + chr3_3:27500947-27500966 Msa0448180:CDS 50.0%
ATCAAGAACACTGGGAGAGG+GGG - chr3_3:27500986-27501005 None:intergenic 50.0%
ATAACCTTCCGAAGACCCCA+AGG - chr3_3:27501105-27501124 None:intergenic 50.0%
TCTGTGACGTAAATAGGGGC+AGG - chr3_3:27501150-27501169 None:intergenic 50.0%
GCCAAAAAAGTGGCTCCAAG+AGG + chr3_3:27501559-27501578 Msa0448180:intron 50.0%
GCCAAACTGGATGCCAAGTA+TGG - chr3_3:27501871-27501890 None:intergenic 50.0%
TACTTGGCATCCAGTTTGGC+TGG + chr3_3:27501871-27501890 Msa0448180:intron 50.0%
TAGTTCACAGCCAGCCAAAC+TGG - chr3_3:27501884-27501903 None:intergenic 50.0%
CCCTCATACCCAACACATGA+TGG - chr3_3:27502022-27502041 None:intergenic 50.0%
GGCCATATCTCTAGGCAATG+TGG - chr3_3:27502057-27502076 None:intergenic 50.0%
! GACAACTTCGAATGGGCTCA+AGG + chr3_3:27503256-27503275 Msa0448180:CDS 50.0%
GTCAGATATCCCGGGACGAA+TGG - chr3_3:27494840-27494859 None:intergenic 55.0%
GCTCAGATATTCCGGGACTG+AGG + chr3_3:27495035-27495054 Msa0448180:intron 55.0%
CTCCGAAGACGAAGTCGGAA+GGG - chr3_3:27495237-27495256 None:intergenic 55.0%
ACTCCGAAGACGAAGTCGGA+AGG - chr3_3:27495238-27495257 None:intergenic 55.0%
AGTCGCCACTTCCGCTTATC+AGG + chr3_3:27495255-27495274 Msa0448180:CDS 55.0%
CATTTGCGCAGACGGTGCAT+TGG + chr3_3:27496303-27496322 Msa0448180:intron 55.0%
ACCTCTACCACCCTCATTGC+TGG - chr3_3:27497603-27497622 None:intergenic 55.0%
AGACAAGATCGTTCCCTCCC+GGG - chr3_3:27498514-27498533 None:intergenic 55.0%
CAGACAAGATCGTTCCCTCC+CGG - chr3_3:27498515-27498534 None:intergenic 55.0%
CCCCTTCAAACCGCAGTCAA+TGG + chr3_3:27499535-27499554 Msa0448180:CDS 55.0%
CGTGCGTGGACAAATATGGG+TGG - chr3_3:27499977-27499996 None:intergenic 55.0%
! GTGCAGGCCTTATAAGGACC+AGG - chr3_3:27500043-27500062 None:intergenic 55.0%
CTTGTCCCCCTTGCTTATCC+TGG - chr3_3:27500114-27500133 None:intergenic 55.0%
GGATAAGCAAGGGGGACAAG+TGG + chr3_3:27500114-27500133 Msa0448180:intron 55.0%
ATCTAGGCGTCTAGCAGCAG+CGG - chr3_3:27500197-27500216 None:intergenic 55.0%
GCACAGGCGATGGAGAGAAT+TGG + chr3_3:27500830-27500849 Msa0448180:CDS 55.0%
GCATACAGGCAGCATCAGAG+TGG + chr3_3:27501067-27501086 Msa0448180:intron 55.0%
TGTTCCTTGGGGTCTTCGGA+AGG + chr3_3:27501098-27501117 Msa0448180:CDS 55.0%
CATGTGTTGGGTATGAGGGG+TGG + chr3_3:27502023-27502042 Msa0448180:intron 55.0%
ATACGTGGCATCAGTTGCGC+AGG + chr3_3:27502614-27502633 Msa0448180:CDS 55.0%
AGGGATGGAGCAGATGTGAG+AGG + chr3_3:27503211-27503230 Msa0448180:intron 55.0%
GGCGACTCCGAAGACGAAGT+CGG - chr3_3:27495242-27495261 None:intergenic 60.0%
!! GAAGGTGCCAGCAATGAGGG+TGG + chr3_3:27497593-27497612 Msa0448180:CDS 60.0%
GCCAGCAATGAGGGTGGTAG+AGG + chr3_3:27497599-27497618 Msa0448180:CDS 60.0%
AGAACACTGGGAGAGGGGGT+GGG - chr3_3:27500982-27501001 None:intergenic 60.0%
AAGAACACTGGGAGAGGGGG+TGG - chr3_3:27500983-27501002 None:intergenic 60.0%
GAACACTGGGAGAGGGGGTG+GGG - chr3_3:27500981-27501000 None:intergenic 65.0%
GCAAGGGGGACAAGTGGGGC+TGG + chr3_3:27500120-27500139 Msa0448180:CDS 70.0%
ACTGGGAGAGGGGGTGGGGT+GGG - chr3_3:27500977-27500996 None:intergenic 70.0%
CACTGGGAGAGGGGGTGGGG+TGG - chr3_3:27500978-27500997 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 27494790 27503624 27494790 ID=Msa0448180;Name=Msa0448180
chr3_3 mRNA 27494790 27503624 27494790 ID=Msa0448180-mRNA-1;Parent=Msa0448180;Name=Msa0448180-mRNA-1;_AED=0.17;_eAED=0.17;_QI=146|0.92|0.92|1|0.92|0.78|14|216|464
chr3_3 exon 27494790 27494830 27494790 ID=Msa0448180-mRNA-1:exon:5369;Parent=Msa0448180-mRNA-1
chr3_3 exon 27495058 27495276 27495058 ID=Msa0448180-mRNA-1:exon:5370;Parent=Msa0448180-mRNA-1
chr3_3 exon 27497590 27497656 27497590 ID=Msa0448180-mRNA-1:exon:5371;Parent=Msa0448180-mRNA-1
chr3_3 exon 27497774 27497832 27497774 ID=Msa0448180-mRNA-1:exon:5372;Parent=Msa0448180-mRNA-1
chr3_3 exon 27498245 27498320 27498245 ID=Msa0448180-mRNA-1:exon:5373;Parent=Msa0448180-mRNA-1
chr3_3 exon 27498636 27498710 27498636 ID=Msa0448180-mRNA-1:exon:5374;Parent=Msa0448180-mRNA-1
chr3_3 exon 27498793 27498880 27498793 ID=Msa0448180-mRNA-1:exon:5375;Parent=Msa0448180-mRNA-1
chr3_3 exon 27499456 27499603 27499456 ID=Msa0448180-mRNA-1:exon:5376;Parent=Msa0448180-mRNA-1
chr3_3 exon 27500115 27500230 27500115 ID=Msa0448180-mRNA-1:exon:5377;Parent=Msa0448180-mRNA-1
chr3_3 exon 27500640 27500851 27500640 ID=Msa0448180-mRNA-1:exon:5378;Parent=Msa0448180-mRNA-1
chr3_3 exon 27500934 27500968 27500934 ID=Msa0448180-mRNA-1:exon:5379;Parent=Msa0448180-mRNA-1
chr3_3 exon 27501075 27501174 27501075 ID=Msa0448180-mRNA-1:exon:5380;Parent=Msa0448180-mRNA-1
chr3_3 exon 27502535 27502643 27502535 ID=Msa0448180-mRNA-1:exon:5381;Parent=Msa0448180-mRNA-1
chr3_3 exon 27503213 27503624 27503213 ID=Msa0448180-mRNA-1:exon:5382;Parent=Msa0448180-mRNA-1
chr3_3 five_prime_UTR 27494790 27494830 27494790 ID=Msa0448180-mRNA-1:five_prime_utr;Parent=Msa0448180-mRNA-1
chr3_3 five_prime_UTR 27495058 27495162 27495058 ID=Msa0448180-mRNA-1:five_prime_utr;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27495163 27495276 27495163 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27497590 27497656 27497590 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27497774 27497832 27497774 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27498245 27498320 27498245 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27498636 27498710 27498636 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27498793 27498880 27498793 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27499456 27499603 27499456 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27500115 27500230 27500115 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27500640 27500851 27500640 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27500934 27500968 27500934 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27501075 27501174 27501075 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27502535 27502643 27502535 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 CDS 27503213 27503408 27503213 ID=Msa0448180-mRNA-1:cds;Parent=Msa0448180-mRNA-1
chr3_3 three_prime_UTR 27503409 27503624 27503409 ID=Msa0448180-mRNA-1:three_prime_utr;Parent=Msa0448180-mRNA-1
Gene Sequence

>Msa0448180

ATGGTAAAGAAAGAAGAGTTTCTGAGAGAAAACGGTTTTGAGAAAGAACAAAAAGTCTCACGCAGTGACTTCCCTTCCGACTTCGTCTTCGGAGTCGCCACTTCCGCTTATCAGATAGAAGGTGCCAGCAATGAGGGTGGTAGAGGTCCTTGTATATGGGATGCCTTTACACACACTGAAGGAAAAATACTTGACAAAAGCAATGGCGATGTAGCAGTTGATCACTATCATCGGTATTTGGAAGATATTGATCTTATAGCCAAGTTGGGTTTTAGCGCTTACAGATTTTCAATTTCTTGGTCTCGTATTTTCCCCGATGGCTTAGGAACCAAAGTCAATGATGAAGGGATATCATTTTACAACAACGTTATTAATGCTCTTCTAGAAAGAGGTATTCAACCTTATGTAACTTTGTACCATTGGGATCTTCCACTGCATCTTGATGAGTCAATGGGAGGATGGTTGAATAAAAAAATCATAGAATACTTTGCAGTCTATGCAGAAACTTGCTTTGCAAGTTTTGGTGATAGAGTGAAGAACTGGATTACTATCAATGAGCCCCTTCAAACCGCAGTCAATGGGTATGATCTTGGAATTTTTGCTCCTGGAAGATGTGAAAATAGATCAGATAAGCAAGGGGGACAAGTGGGGCTGGTTGTAGACTGTGAATGGTCAGAGCCTAACTCTGATAAGATTGAAGATAAATCCGCTGCTGCTAGACGCCTAGATTTTCAGATTGGCTGGTTCTTGCATCCACTGTATCATGGAGAGTATCCTGAAACTATGCGTGAACGACTTGGAGACCAGCTTCCCAAATTCTCAGAGGAGGATAAAAAATTTCTTTTGAATTCTTTAGACTTTATTGGTCTAAATCACTATACAACAAGGTTAATTTCACATGTGACAGAATCTGGAGAAAGTTATTACTACAACGCACAGGCGATGGAGAGAATTGTTGAATGGGAAGATGGTCAGCTCATTGGTGAGAAGGCAGCATCAGAGTGGCTATATGTTGTTCCTTGGGGTCTTCGGAAGGTTATTAATTACGTATCACAAAAATATCCTGCCCCTATTTACGTCACAGAGAACGGTATGGATGATGAAGAAAATGATAGCTTGCCATTACATGAGATGCTAGATGACAAACTGAGGGTTCAATACTTCAAGGGATACGTGGCATCAGTTGCGCAGGCTATGAAGGATGGAGCAGATGTGAGAGGATACTTTGCATGGTCATTACTGGACAACTTCGAATGGGCTCAAGGTTATACCAAACGCTTCGGATTGGTCTATGTAGATTACAAAAATGGACTCACTAGGCACCCAAAGTCTTCTGCATATTGGTTTTCGCGGTTTCTGAAAGATGGGACAAACAAGAAGGGTAAAGAAGACTAG
Protein sequence

>Msa0448180

MVKKEEFLRENGFEKEQKVSRSDFPSDFVFGVATSAYQIEGASNEGGRGPCIWDAFTHTEGKILDKSNGDVAVDHYHRYLEDIDLIAKLGFSAYRFSISWSRIFPDGLGTKVNDEGISFYNNVINALLERGIQPYVTLYHWDLPLHLDESMGGWLNKKIIEYFAVYAETCFASFGDRVKNWITINEPLQTAVNGYDLGIFAPGRCENRSDKQGGQVGLVVDCEWSEPNSDKIEDKSAAARRLDFQIGWFLHPLYHGEYPETMRERLGDQLPKFSEEDKKFLLNSLDFIGLNHYTTRLISHVTESGESYYYNAQAMERIVEWEDGQLIGEKAASEWLYVVPWGLRKVINYVSQKYPAPIYVTENGMDDEENDSLPLHEMLDDKLRVQYFKGYVASVAQAMKDGADVRGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLTRHPKSSAYWFSRFLKDGTNKKGKED*