Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0571290 | XP_013447020.2 | 89.901 | 1010 | 41 | 4 | 19 | 1027 | 86 | 1035 | 0.0 | 1754 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0571290 | A0A396GWY6 | 89.901 | 1010 | 41 | 4 | 19 | 1027 | 86 | 1035 | 0.0 | 1754 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000050 | Msa0571290 | 0.819955 | 8.850653e-53 | -8.615850e-47 |
Msa0001940 | Msa0571290 | 0.822235 | 2.640654e-53 | -8.615850e-47 |
Msa0001960 | Msa0571290 | 0.828885 | 7.009652e-55 | -8.615850e-47 |
Msa0002580 | Msa0571290 | 0.822089 | 2.853898e-53 | -8.615850e-47 |
Msa0005890 | Msa0571290 | 0.836968 | 6.854450e-57 | -8.615850e-47 |
Msa0017930 | Msa0571290 | 0.827588 | 1.439722e-54 | -8.615850e-47 |
Msa0017950 | Msa0571290 | 0.836431 | 9.394140e-57 | -8.615850e-47 |
Msa0025160 | Msa0571290 | 0.801951 | 7.064665e-49 | -8.615850e-47 |
Msa0032920 | Msa0571290 | -0.826916 | 2.086363e-54 | -8.615850e-47 |
Msa0032960 | Msa0571290 | -0.828854 | 7.132707e-55 | -8.615850e-47 |
Msa0034210 | Msa0571290 | 0.811184 | 7.950199e-51 | -8.615850e-47 |
Msa0035060 | Msa0571290 | 0.802555 | 5.308053e-49 | -8.615850e-47 |
Msa0036890 | Msa0571290 | 0.828095 | 1.087421e-54 | -8.615850e-47 |
Msa0042640 | Msa0571290 | 0.805473 | 1.312706e-49 | -8.615850e-47 |
Msa0048510 | Msa0571290 | 0.822105 | 2.830422e-53 | -8.615850e-47 |
Msa0050660 | Msa0571290 | 0.820941 | 5.255291e-53 | -8.615850e-47 |
Msa0050700 | Msa0571290 | 0.822679 | 2.082275e-53 | -8.615850e-47 |
Msa0050790 | Msa0571290 | 0.825229 | 5.253623e-54 | -8.615850e-47 |
Msa0054690 | Msa0571290 | 0.817565 | 3.086685e-52 | -8.615850e-47 |
Msa0072900 | Msa0571290 | 0.805775 | 1.134186e-49 | -8.615850e-47 |
Msa0074600 | Msa0571290 | 0.806815 | 6.848417e-50 | -8.615850e-47 |
Msa0077340 | Msa0571290 | 0.825463 | 4.623431e-54 | -8.615850e-47 |
Msa0077560 | Msa0571290 | 0.824824 | 6.546625e-54 | -8.615850e-47 |
Msa0081520 | Msa0571290 | 0.805289 | 1.434727e-49 | -8.615850e-47 |
Msa0084970 | Msa0571290 | 0.831956 | 1.244168e-55 | -8.615850e-47 |
Msa0090400 | Msa0571290 | 0.806058 | 9.892914e-50 | -8.615850e-47 |
Msa0094780 | Msa0571290 | 0.846336 | 2.316259e-59 | -8.615850e-47 |
Msa0098040 | Msa0571290 | 0.812599 | 3.909051e-51 | -8.615850e-47 |
Msa0106620 | Msa0571290 | 0.806595 | 7.620631e-50 | -8.615850e-47 |
Msa0108410 | Msa0571290 | 0.814340 | 1.619618e-51 | -8.615850e-47 |
Msa0125360 | Msa0571290 | 0.836639 | 8.317786e-57 | -8.615850e-47 |
Msa0128310 | Msa0571290 | 0.816962 | 4.219390e-52 | -8.615850e-47 |
Msa0133280 | Msa0571290 | 0.808469 | 3.050676e-50 | -8.615850e-47 |
Msa0136650 | Msa0571290 | 0.855767 | 5.056632e-62 | -8.615850e-47 |
Msa0137880 | Msa0571290 | 0.813182 | 2.912900e-51 | -8.615850e-47 |
Msa0140280 | Msa0571290 | 0.833333 | 5.665440e-56 | -8.615850e-47 |
Msa0174440 | Msa0571290 | 0.814710 | 1.341176e-51 | -8.615850e-47 |
Msa0174450 | Msa0571290 | 0.867843 | 1.014801e-65 | -8.615850e-47 |
Msa0190570 | Msa0571290 | 0.814433 | 1.544700e-51 | -8.615850e-47 |
Msa0200050 | Msa0571290 | 0.803517 | 3.356518e-49 | -8.615850e-47 |
Msa0208140 | Msa0571290 | 0.823856 | 1.105704e-53 | -8.615850e-47 |
Msa0213030 | Msa0571290 | 0.814342 | 1.617631e-51 | -8.615850e-47 |
Msa0221000 | Msa0571290 | 0.834155 | 3.529073e-56 | -8.615850e-47 |
Msa0222560 | Msa0571290 | 0.827908 | 1.206363e-54 | -8.615850e-47 |
Msa0223210 | Msa0571290 | 0.820679 | 6.039932e-53 | -8.615850e-47 |
Msa0225100 | Msa0571290 | 0.841584 | 4.348357e-58 | -8.615850e-47 |
Msa0225460 | Msa0571290 | 0.802481 | 5.497716e-49 | -8.615850e-47 |
Msa0225680 | Msa0571290 | 0.805031 | 1.624266e-49 | -8.615850e-47 |
Msa0225860 | Msa0571290 | 0.864060 | 1.595510e-64 | -8.615850e-47 |
Msa0230800 | Msa0571290 | 0.805735 | 1.156239e-49 | -8.615850e-47 |
Msa0369790 | Msa0571290 | 0.834434 | 3.004980e-56 | -8.615850e-47 |
Msa0371270 | Msa0571290 | 0.828990 | 6.609817e-55 | -8.615850e-47 |
Msa0375640 | Msa0571290 | 0.828647 | 8.004601e-55 | -8.615850e-47 |
Msa0378720 | Msa0571290 | 0.839737 | 1.324625e-57 | -8.615850e-47 |
Msa0380620 | Msa0571290 | 0.859133 | 5.107527e-63 | -8.615850e-47 |
Msa0380670 | Msa0571290 | 0.827294 | 1.693492e-54 | -8.615850e-47 |
Msa0390970 | Msa0571290 | 0.831227 | 1.881502e-55 | -8.615850e-47 |
Msa0392380 | Msa0571290 | 0.823172 | 1.597899e-53 | -8.615850e-47 |
Msa0403640 | Msa0571290 | 0.820031 | 8.502409e-53 | -8.615850e-47 |
Msa0419540 | Msa0571290 | 0.835744 | 1.404062e-56 | -8.615850e-47 |
Msa0424160 | Msa0571290 | 0.837729 | 4.376357e-57 | -8.615850e-47 |
Msa0426530 | Msa0571290 | 0.814219 | 1.722363e-51 | -8.615850e-47 |
Msa0428370 | Msa0571290 | 0.843729 | 1.171465e-58 | -8.615850e-47 |
Msa0430260 | Msa0571290 | 0.860747 | 1.664531e-63 | -8.615850e-47 |
Msa0430300 | Msa0571290 | 0.828657 | 7.959568e-55 | -8.615850e-47 |
Msa0432140 | Msa0571290 | 0.810735 | 9.941511e-51 | -8.615850e-47 |
Msa0436910 | Msa0571290 | 0.827824 | 1.264062e-54 | -8.615850e-47 |
Msa0440320 | Msa0571290 | 0.823610 | 1.262775e-53 | -8.615850e-47 |
Msa0448180 | Msa0571290 | 0.820309 | 7.342641e-53 | -8.615850e-47 |
Msa0464000 | Msa0571290 | 0.831379 | 1.725688e-55 | -8.615850e-47 |
Msa0465530 | Msa0571290 | 0.838792 | 2.329174e-57 | -8.615850e-47 |
Msa0472950 | Msa0571290 | 0.848803 | 4.857401e-60 | -8.615850e-47 |
Msa0474730 | Msa0571290 | 0.855767 | 5.057741e-62 | -8.615850e-47 |
Msa0476650 | Msa0571290 | 0.819204 | 1.313181e-52 | -8.615850e-47 |
Msa0241610 | Msa0571290 | 0.840452 | 8.623723e-58 | -8.615850e-47 |
Msa0242590 | Msa0571290 | 0.857321 | 1.768091e-62 | -8.615850e-47 |
Msa0244640 | Msa0571290 | 0.822208 | 2.679320e-53 | -8.615850e-47 |
Msa0247940 | Msa0571290 | 0.801119 | 1.046525e-48 | -8.615850e-47 |
Msa0260510 | Msa0571290 | 0.847019 | 1.507005e-59 | -8.615850e-47 |
Msa0266180 | Msa0571290 | 0.831739 | 1.407165e-55 | -8.615850e-47 |
Msa0267110 | Msa0571290 | 0.821505 | 3.896536e-53 | -8.615850e-47 |
Msa0271880 | Msa0571290 | 0.806765 | 7.016226e-50 | -8.615850e-47 |
Msa0279690 | Msa0571290 | 0.864970 | 8.287795e-65 | -8.615850e-47 |
Msa0280790 | Msa0571290 | 0.839900 | 1.201137e-57 | -8.615850e-47 |
Msa0283330 | Msa0571290 | 0.808438 | 3.096755e-50 | -8.615850e-47 |
Msa0287740 | Msa0571290 | 0.839591 | 1.445916e-57 | -8.615850e-47 |
Msa0297790 | Msa0571290 | 0.801000 | 1.106744e-48 | -8.615850e-47 |
Msa0298470 | Msa0571290 | 0.839313 | 1.707637e-57 | -8.615850e-47 |
Msa0300270 | Msa0571290 | 0.802671 | 5.021776e-49 | -8.615850e-47 |
Msa0300320 | Msa0571290 | 0.816033 | 6.810527e-52 | -8.615850e-47 |
Msa0301820 | Msa0571290 | 0.816286 | 5.981549e-52 | -8.615850e-47 |
Msa0302290 | Msa0571290 | 0.801263 | 9.780479e-49 | -8.615850e-47 |
Msa0307270 | Msa0571290 | 0.862910 | 3.625870e-64 | -8.615850e-47 |
Msa0307670 | Msa0571290 | 0.814691 | 1.354381e-51 | -8.615850e-47 |
Msa0310850 | Msa0571290 | 0.804227 | 2.390664e-49 | -8.615850e-47 |
Msa0321620 | Msa0571290 | 0.810683 | 1.020614e-50 | -8.615850e-47 |
Msa0330380 | Msa0571290 | 0.806923 | 6.498905e-50 | -8.615850e-47 |
Msa0337700 | Msa0571290 | 0.834961 | 2.214081e-56 | -8.615850e-47 |
Msa0339650 | Msa0571290 | 0.822236 | 2.639115e-53 | -8.615850e-47 |
Msa0340500 | Msa0571290 | 0.807178 | 5.739208e-50 | -8.615850e-47 |
Msa0483100 | Msa0571290 | 0.812739 | 3.643032e-51 | -8.615850e-47 |
Msa0500380 | Msa0571290 | 0.829405 | 5.242059e-55 | -8.615850e-47 |
Msa0509550 | Msa0571290 | 0.828134 | 1.064469e-54 | -8.615850e-47 |
Msa0515800 | Msa0571290 | 0.826419 | 2.741715e-54 | -8.615850e-47 |
Msa0517250 | Msa0571290 | 0.834115 | 3.612662e-56 | -8.615850e-47 |
Msa0519750 | Msa0571290 | 0.837774 | 4.262731e-57 | -8.615850e-47 |
Msa0519760 | Msa0571290 | 0.845051 | 5.169344e-59 | -8.615850e-47 |
Msa0519810 | Msa0571290 | 0.829625 | 4.636968e-55 | -8.615850e-47 |
Msa0519820 | Msa0571290 | 0.816381 | 5.693425e-52 | -8.615850e-47 |
Msa0519830 | Msa0571290 | 0.847233 | 1.316580e-59 | -8.615850e-47 |
Msa0519840 | Msa0571290 | 0.845847 | 3.146610e-59 | -8.615850e-47 |
Msa0520990 | Msa0571290 | 0.808120 | 3.620409e-50 | -8.615850e-47 |
Msa0528570 | Msa0571290 | 0.867856 | 1.005394e-65 | -8.615850e-47 |
Msa0529030 | Msa0571290 | 0.845610 | 3.647840e-59 | -8.615850e-47 |
Msa0534720 | Msa0571290 | 0.829215 | 5.829980e-55 | -8.615850e-47 |
Msa0541300 | Msa0571290 | 0.810369 | 1.193063e-50 | -8.615850e-47 |
Msa0541310 | Msa0571290 | 0.804283 | 2.326983e-49 | -8.615850e-47 |
Msa0548470 | Msa0571290 | 0.866506 | 2.712672e-65 | -8.615850e-47 |
Msa0549360 | Msa0571290 | 0.819100 | 1.386532e-52 | -8.615850e-47 |
Msa0555860 | Msa0571290 | -0.809013 | 2.333221e-50 | -8.615850e-47 |
Msa0557370 | Msa0571290 | 0.821179 | 4.632310e-53 | -8.615850e-47 |
Msa0557460 | Msa0571290 | 0.849052 | 4.141480e-60 | -8.615850e-47 |
Msa0567170 | Msa0571290 | 0.801893 | 7.263847e-49 | -8.615850e-47 |
Msa0569200 | Msa0571290 | 0.804413 | 2.185916e-49 | -8.615850e-47 |
Msa0570120 | Msa0571290 | 0.810695 | 1.014372e-50 | -8.615850e-47 |
Msa0571290 | Msa0575920 | 0.815886 | 7.344990e-52 | -8.615850e-47 |
Msa0571290 | Msa0580370 | 0.849058 | 4.124924e-60 | -8.615850e-47 |
Msa0571290 | Msa0581470 | 0.837818 | 4.153737e-57 | -8.615850e-47 |
Msa0571290 | Msa0583360 | -0.817758 | 2.792975e-52 | -8.615850e-47 |
Msa0571290 | Msa0585020 | 0.821693 | 3.526234e-53 | -8.615850e-47 |
Msa0571290 | Msa0587620 | 0.815696 | 8.097732e-52 | -8.615850e-47 |
Msa0571290 | Msa0597270 | 0.838431 | 2.888008e-57 | -8.615850e-47 |
Msa0571290 | Msa0597790 | 0.825360 | 4.890273e-54 | -8.615850e-47 |
Msa0571290 | Msa0600930 | 0.820246 | 7.588996e-53 | -8.615850e-47 |
Msa0571290 | Msa0611210 | 0.851889 | 6.613058e-61 | -8.615850e-47 |
Msa0571290 | Msa0624900 | 0.809082 | 2.256224e-50 | -8.615850e-47 |
Msa0571290 | Msa0626450 | 0.881482 | 2.314373e-70 | -8.615850e-47 |
Msa0571290 | Msa0626490 | 0.877385 | 6.557870e-69 | -8.615850e-47 |
Msa0571290 | Msa0644410 | 0.856616 | 2.852639e-62 | -8.615850e-47 |
Msa0571290 | Msa0651550 | 0.824943 | 6.135414e-54 | -8.615850e-47 |
Msa0571290 | Msa0652770 | 0.835237 | 1.886312e-56 | -8.615850e-47 |
Msa0571290 | Msa0658640 | 0.802404 | 5.702590e-49 | -8.615850e-47 |
Msa0571290 | Msa0661150 | 0.804492 | 2.104713e-49 | -8.615850e-47 |
Msa0571290 | Msa0663300 | 0.800282 | 1.550885e-48 | -8.615850e-47 |
Msa0571290 | Msa0664060 | 0.803322 | 3.684500e-49 | -8.615850e-47 |
Msa0571290 | Msa0664600 | 0.880025 | 7.710170e-70 | -8.615850e-47 |
Msa0571290 | Msa0664710 | 0.801433 | 9.023912e-49 | -8.615850e-47 |
Msa0571290 | Msa0670100 | 0.842080 | 3.217335e-58 | -8.615850e-47 |
Msa0571290 | Msa0675330 | 0.825380 | 4.837430e-54 | -8.615850e-47 |
Msa0571290 | Msa0683490 | 0.823740 | 1.176782e-53 | -8.615850e-47 |
Msa0571290 | Msa0684220 | 0.805055 | 1.605381e-49 | -8.615850e-47 |
Msa0571290 | Msa0691400 | 0.806578 | 7.685067e-50 | -8.615850e-47 |
Msa0571290 | Msa0693890 | 0.818272 | 2.137374e-52 | -8.615850e-47 |
Msa0571290 | Msa0695270 | 0.826053 | 3.349957e-54 | -8.615850e-47 |
Msa0571290 | Msa0709440 | 0.804415 | 2.183939e-49 | -8.615850e-47 |
Msa0571290 | Msa0711400 | 0.807148 | 5.822563e-50 | -8.615850e-47 |
Msa0571290 | Msa0711430 | 0.815570 | 8.637906e-52 | -8.615850e-47 |
Msa0571290 | Msa0720410 | 0.812945 | 3.284195e-51 | -8.615850e-47 |
Msa0571290 | Msa0721080 | 0.844124 | 9.181268e-59 | -8.615850e-47 |
Msa0571290 | Msa0735780 | 0.820143 | 8.013573e-53 | -8.615850e-47 |
Msa0571290 | Msa0736960 | 0.822723 | 2.033548e-53 | -8.615850e-47 |
Msa0571290 | Msa0738700 | 0.825571 | 4.359883e-54 | -8.615850e-47 |
Msa0571290 | Msa0741220 | 0.849458 | 3.192753e-60 | -8.615850e-47 |
Msa0571290 | Msa0756490 | 0.836308 | 1.009958e-56 | -8.615850e-47 |
Msa0571290 | Msa0761670 | 0.821178 | 4.635505e-53 | -8.615850e-47 |
Msa0571290 | Msa0778590 | 0.845497 | 3.915423e-59 | -8.615850e-47 |
Msa0571290 | Msa0783530 | 0.822682 | 2.078736e-53 | -8.615850e-47 |
Msa0571290 | Msa0792370 | 0.817002 | 4.132789e-52 | -8.615850e-47 |
Msa0571290 | Msa0795870 | 0.862827 | 3.846133e-64 | -8.615850e-47 |
Msa0571290 | Msa0807260 | 0.812472 | 4.167814e-51 | -8.615850e-47 |
Msa0571290 | Msa0815960 | 0.828536 | 8.513632e-55 | -8.615850e-47 |
Msa0571290 | Msa0828970 | 0.803396 | 3.556788e-49 | -8.615850e-47 |
Msa0571290 | Msa0829300 | 0.817332 | 3.483410e-52 | -8.615850e-47 |
Msa0571290 | Msa0829330 | 0.826672 | 2.385100e-54 | -8.615850e-47 |
Msa0571290 | Msa0832120 | 0.811853 | 5.687609e-51 | -8.615850e-47 |
Msa0571290 | Msa0833650 | 0.857007 | 2.187916e-62 | -8.615850e-47 |
Msa0571290 | Msa0835490 | 0.835621 | 1.508746e-56 | -8.615850e-47 |
Msa0571290 | Msa0859290 | 0.824057 | 9.921074e-54 | -8.615850e-47 |
Msa0571290 | Msa0861510 | 0.827278 | 1.708650e-54 | -8.615850e-47 |
Msa0571290 | Msa0861530 | 0.815014 | 1.148139e-51 | -8.615850e-47 |
Msa0571290 | Msa0861600 | 0.833646 | 4.731840e-56 | -8.615850e-47 |
Msa0571290 | Msa0866520 | 0.805047 | 1.611942e-49 | -8.615850e-47 |
Msa0571290 | Msa0878280 | 0.806238 | 9.065863e-50 | -8.615850e-47 |
Msa0571290 | Msa0945110 | 0.801785 | 7.641609e-49 | -8.615850e-47 |
Msa0571290 | Msa0945190 | 0.839185 | 1.842882e-57 | -8.615850e-47 |
Msa0571290 | Msa0945490 | 0.841629 | 4.232159e-58 | -8.615850e-47 |
Msa0571290 | Msa0967870 | 0.832667 | 8.295866e-56 | -8.615850e-47 |
Msa0571290 | Msa0981320 | 0.831991 | 1.219315e-55 | -8.615850e-47 |
Msa0571290 | Msa1009950 | 0.802113 | 6.545619e-49 | -8.615850e-47 |
Msa0571290 | Msa1020480 | 0.855971 | 4.409169e-62 | -8.615850e-47 |
Msa0571290 | Msa1020510 | 0.852390 | 4.762820e-61 | -8.615850e-47 |
Msa0571290 | Msa1021210 | 0.814181 | 1.755772e-51 | -8.615850e-47 |
Msa0571290 | Msa1021590 | 0.812244 | 4.673492e-51 | -8.615850e-47 |
Msa0571290 | Msa1023500 | 0.820144 | 8.010409e-53 | -8.615850e-47 |
Msa0571290 | Msa1023570 | 0.821094 | 4.845934e-53 | -8.615850e-47 |
Msa0571290 | Msa1028280 | 0.802801 | 4.722682e-49 | -8.615850e-47 |
Msa0571290 | Msa1042160 | 0.840211 | 9.967403e-58 | -8.615850e-47 |
Msa0571290 | Msa1042190 | 0.841487 | 4.611613e-58 | -8.615850e-47 |
Msa0571290 | Msa1044680 | 0.846589 | 1.975670e-59 | -8.615850e-47 |
Msa0571290 | Msa1051900 | 0.817722 | 2.846352e-52 | -8.615850e-47 |
Msa0571290 | Msa1066670 | 0.828342 | 9.480000e-55 | -8.615850e-47 |
Msa0571290 | Msa1072940 | 0.856509 | 3.065634e-62 | -8.615850e-47 |
Msa0571290 | Msa1080000 | 0.803475 | 3.425166e-49 | -8.615850e-47 |
Msa0571290 | Msa1081390 | 0.810244 | 1.269458e-50 | -8.615850e-47 |
Msa0571290 | Msa1081690 | 0.802324 | 5.921449e-49 | -8.615850e-47 |
Msa0571290 | Msa1082200 | 0.811527 | 6.696393e-51 | -8.615850e-47 |
Msa0571290 | Msa1085330 | 0.874162 | 8.379000e-68 | -8.615850e-47 |
Msa0571290 | Msa1096960 | 0.830189 | 3.378580e-55 | -8.615850e-47 |
Msa0571290 | Msa1099710 | 0.817897 | 2.597738e-52 | -8.615850e-47 |
Msa0571290 | Msa1105640 | 0.818229 | 2.186271e-52 | -8.615850e-47 |
Msa0571290 | Msa1112380 | 0.802419 | 5.661082e-49 | -8.615850e-47 |
Msa0571290 | Msa1113340 | 0.810095 | 1.366462e-50 | -8.615850e-47 |
Msa0571290 | Msa1116220 | 0.816204 | 6.237695e-52 | -8.615850e-47 |
Msa0571290 | Msa1116400 | 0.801277 | 9.715970e-49 | -8.615850e-47 |
Msa0571290 | Msa1119660 | 0.862823 | 3.856920e-64 | -8.615850e-47 |
Msa0571290 | Msa1123210 | 0.838453 | 2.849379e-57 | -8.615850e-47 |
Msa0571290 | Msa1125820 | 0.801236 | 9.901862e-49 | -8.615850e-47 |
Msa0571290 | Msa1125990 | 0.805079 | 1.587251e-49 | -8.615850e-47 |
Msa0571290 | Msa1132840 | 0.851066 | 1.130176e-60 | -8.615850e-47 |
Msa0571290 | Msa1140220 | 0.805866 | 1.085381e-49 | -8.615850e-47 |
Msa0571290 | Msa1147740 | 0.805997 | 1.018690e-49 | -8.615850e-47 |
Msa0571290 | Msa1155170 | -0.809336 | 1.990049e-50 | -8.615850e-47 |
Msa0571290 | Msa1160920 | 0.873733 | 1.169246e-67 | -8.615850e-47 |
Msa0571290 | Msa1163100 | 0.810346 | 1.206578e-50 | -8.615850e-47 |
Msa0571290 | Msa1167470 | 0.826298 | 2.929055e-54 | -8.615850e-47 |
Msa0571290 | Msa1171290 | 0.800135 | 1.661477e-48 | -8.615850e-47 |
Msa0571290 | Msa1174840 | 0.807541 | 4.806139e-50 | -8.615850e-47 |
Msa0571290 | Msa1175180 | 0.821240 | 4.484505e-53 | -8.615850e-47 |
Msa0571290 | Msa1186020 | 0.827049 | 1.939297e-54 | -8.615850e-47 |
Msa0571290 | Msa1190180 | 0.808776 | 2.622358e-50 | -8.615850e-47 |
Msa0571290 | Msa1192570 | 0.817766 | 2.780982e-52 | -8.615850e-47 |
Msa0571290 | Msa1200890 | 0.809719 | 1.646774e-50 | -8.615850e-47 |
Msa0571290 | Msa1208950 | 0.856257 | 3.634392e-62 | -8.615850e-47 |
Msa0571290 | Msa1209420 | 0.804184 | 2.439787e-49 | -8.615850e-47 |
Msa0571290 | Msa1215870 | 0.808527 | 2.964539e-50 | -8.615850e-47 |
Msa0571290 | Msa1216110 | 0.817487 | 3.215180e-52 | -8.615850e-47 |
Msa0571290 | Msa1223470 | 0.804880 | 1.746845e-49 | -8.615850e-47 |
Msa0571290 | Msa1225860 | -0.818956 | 1.495495e-52 | -8.615850e-47 |
Msa0571290 | Msa1226520 | 0.801892 | 7.266854e-49 | -8.615850e-47 |
Msa0571290 | Msa1234710 | 0.824441 | 8.059865e-54 | -8.615850e-47 |
Msa0571290 | Msa1235410 | 0.816151 | 6.411193e-52 | -8.615850e-47 |
Msa0571290 | Msa1238820 | 0.810751 | 9.865454e-51 | -8.615850e-47 |
Msa0571290 | Msa1256350 | 0.824017 | 1.013663e-53 | -8.615850e-47 |
Msa0571290 | Msa1265650 | 0.821386 | 4.150163e-53 | -8.615850e-47 |
Msa0571290 | Msa1277150 | 0.814019 | 1.906880e-51 | -8.615850e-47 |
Msa0571290 | Msa1277220 | 0.825527 | 4.465929e-54 | -8.615850e-47 |
Msa0571290 | Msa1277640 | 0.808894 | 2.475046e-50 | -8.615850e-47 |
Msa0571290 | Msa1297230 | 0.821667 | 3.574735e-53 | -8.615850e-47 |
Msa0571290 | Msa1303560 | 0.825469 | 4.610085e-54 | -8.615850e-47 |
Msa0571290 | Msa1303650 | 0.823899 | 1.080026e-53 | -8.615850e-47 |
Msa0571290 | Msa1315130 | 0.818322 | 2.082189e-52 | -8.615850e-47 |
Msa0571290 | Msa1315160 | 0.833802 | 4.325170e-56 | -8.615850e-47 |
Msa0571290 | Msa1315590 | 0.801229 | 9.936775e-49 | -8.615850e-47 |
Msa0571290 | Msa1316330 | 0.801247 | 9.850325e-49 | -8.615850e-47 |
Msa0571290 | Msa1318170 | 0.806338 | 8.635940e-50 | -8.615850e-47 |
Msa0571290 | Msa1320670 | 0.814021 | 1.904192e-51 | -8.615850e-47 |
Msa0571290 | Msa1321340 | 0.803395 | 3.558216e-49 | -8.615850e-47 |
Msa0571290 | Msa1330420 | 0.803061 | 4.171250e-49 | -8.615850e-47 |
Msa0571290 | Msa1341840 | 0.822873 | 1.876797e-53 | -8.615850e-47 |
Msa0571290 | Msa1343170 | 0.801090 | 1.060767e-48 | -8.615850e-47 |
Msa0571290 | Msa1343180 | 0.804300 | 2.307705e-49 | -8.615850e-47 |
Msa0571290 | Msa1343430 | 0.814675 | 1.365492e-51 | -8.615850e-47 |
Msa0571290 | Msa1348090 | 0.892541 | 1.443226e-74 | -8.615850e-47 |
Msa0571290 | Msa1355450 | 0.817536 | 3.134198e-52 | -8.615850e-47 |
Msa0571290 | Msa1356830 | 0.803154 | 3.991338e-49 | -8.615850e-47 |
Msa0571290 | Msa1359690 | 0.816716 | 4.790014e-52 | -8.615850e-47 |
Msa0571290 | Msa1371910 | 0.820833 | 5.565305e-53 | -8.615850e-47 |
Msa0571290 | Msa1372040 | 0.834753 | 2.497269e-56 | -8.615850e-47 |
Msa0571290 | Msa1382300 | 0.828083 | 1.094711e-54 | -8.615850e-47 |
Msa0571290 | Msa1392580 | 0.811566 | 6.565090e-51 | -8.615850e-47 |
Msa0571290 | Msa1393780 | 0.822447 | 2.357501e-53 | -8.615850e-47 |
Msa0571290 | Msa1397400 | 0.848221 | 7.037897e-60 | -8.615850e-47 |
Msa0571290 | Msa1405460 | 0.845183 | 4.761349e-59 | -8.615850e-47 |
Msa0571290 | Msa1412000 | 0.821888 | 3.177920e-53 | -8.615850e-47 |
Msa0571290 | Msa1415540 | 0.862124 | 6.328419e-64 | -8.615850e-47 |
Msa0571290 | Msa1420950 | 0.828463 | 8.863539e-55 | -8.615850e-47 |
Msa0571290 | Msa1427100 | 0.824829 | 6.528345e-54 | -8.615850e-47 |
Msa0571290 | Msa1427110 | 0.834523 | 2.853967e-56 | -8.615850e-47 |
Msa0571290 | Msa1427200 | 0.834450 | 2.976053e-56 | -8.615850e-47 |
Msa0571290 | Msa1437930 | 0.809830 | 1.558521e-50 | -8.615850e-47 |
Msa0571290 | Msa1440630 | 0.826537 | 2.569291e-54 | -8.615850e-47 |
Msa0571290 | Msa1440960 | 0.883255 | 5.236862e-71 | -8.615850e-47 |
Msa0571290 | Msa1449480 | 0.806190 | 9.275953e-50 | -8.615850e-47 |
Msa0571290 | Msa1452140 | 0.808369 | 3.204400e-50 | -8.615850e-47 |
Msa0571290 | Msa1459460 | 0.822642 | 2.123585e-53 | -8.615850e-47 |
Msa0571290 | Msa1461370 | 0.807142 | 5.840290e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0571290 | MtrunA17_Chr8g0386571 | 89.901 | 1010 | 41 | 4 | 19 | 1027 | 86 | 1035 | 0.0 | 1754 |
Msa0571290 | MtrunA17_Chr5g0397721 | 62.062 | 1028 | 319 | 8 | 19 | 1027 | 87 | 1062 | 0.0 | 1125 |
Msa0571290 | MtrunA17_Chr1g0203361 | 36.270 | 681 | 358 | 11 | 19 | 690 | 84 | 697 | 2.83e-105 | 348 |
Msa0571290 | MtrunA17_Chr1g0203361 | 70.909 | 55 | 16 | 0 | 972 | 1026 | 798 | 852 | 7.92e-16 | 82.8 |
Msa0571290 | MtrunA17_Chr1g0179821 | 25.187 | 401 | 241 | 12 | 4 | 380 | 72 | 437 | 3.13e-13 | 74.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0571290 | AT1G63300.1 | 44.283 | 1032 | 463 | 18 | 19 | 1027 | 87 | 1029 | 0.0 | 683 |
Msa0571290 | AT5G41140.2 | 43.775 | 1012 | 441 | 18 | 19 | 1026 | 88 | 975 | 0.0 | 677 |
Msa0571290 | AT5G41140.1 | 44.269 | 1012 | 443 | 19 | 19 | 1026 | 88 | 982 | 0.0 | 676 |
Msa0571290 | AT5G52280.1 | 34.314 | 816 | 404 | 17 | 19 | 826 | 85 | 776 | 4.05e-100 | 335 |
Msa0571290 | AT5G52280.1 | 30.707 | 368 | 188 | 18 | 710 | 1026 | 501 | 852 | 8.37e-14 | 76.6 |
Msa0571290 | AT1G22060.2 | 24.855 | 688 | 387 | 22 | 19 | 651 | 87 | 699 | 1.58e-19 | 95.5 |
Msa0571290 | AT1G22060.2 | 52.542 | 59 | 28 | 0 | 969 | 1027 | 1927 | 1985 | 2.98e-11 | 68.6 |
Msa0571290 | AT1G22060.1 | 24.855 | 688 | 387 | 22 | 19 | 651 | 87 | 699 | 1.58e-19 | 95.5 |
Msa0571290 | AT1G22060.1 | 52.542 | 59 | 28 | 0 | 969 | 1027 | 1927 | 1985 | 2.98e-11 | 68.6 |
Find 199 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCCTCCAGTTCCTCAATTT+TGG | 0.100815 | 4_1:-73898813 | None:intergenic |
AGCATCAGCTTCTTCATATT+TGG | 0.135855 | 4_1:+73898769 | Msa0571290:CDS |
TTTAGTCTGTTTGTAATTAT+TGG | 0.149429 | 4_1:-73897097 | None:intergenic |
GGTATTTCTGCTTCTTTCTT+TGG | 0.158854 | 4_1:-73899535 | None:intergenic |
TCTCAGATCTGTCATTTCTT+TGG | 0.232398 | 4_1:-73898489 | None:intergenic |
TCATGTATATCGGAAGAAAA+TGG | 0.240483 | 4_1:+73899320 | Msa0571290:CDS |
CATCAATAAGAGAATGTTTC+AGG | 0.263786 | 4_1:-73898328 | None:intergenic |
ATAAGAAGAAGAAGAATAAA+AGG | 0.270215 | 4_1:-73894814 | None:intergenic |
GCAGTTTGACAGAGTTTATA+AGG | 0.276460 | 4_1:+73899930 | Msa0571290:three_prime_UTR |
TTATCAAAAGCTAGTATCTT+TGG | 0.299529 | 4_1:+73895589 | Msa0571290:CDS |
TGAACTAGTTCTTGCTGTTC+AGG | 0.309083 | 4_1:+73897026 | Msa0571290:CDS |
CCATCTTATATGCAAATTCA+TGG | 0.311512 | 4_1:-73897347 | None:intergenic |
TACAAGAAAATAGTGATAAA+AGG | 0.318196 | 4_1:+73895879 | Msa0571290:CDS |
GGTCACTTGATGAGCTAAAT+AGG | 0.319780 | 4_1:+73898222 | Msa0571290:CDS |
CAAGGCTGAAGTTGCTGCTT+TGG | 0.329744 | 4_1:+73896690 | Msa0571290:CDS |
CCTCCTCTAACTTGCGGATC+TGG | 0.350616 | 4_1:-73897533 | None:intergenic |
TTGCCATTACTATCCATTAC+TGG | 0.360182 | 4_1:-73899556 | None:intergenic |
ATCAGAGATCATCACATTTC+CGG | 0.360321 | 4_1:+73896551 | Msa0571290:CDS |
GCTATGATAACTCTCTAATA+TGG | 0.362852 | 4_1:-73899909 | None:intergenic |
TGCTCAGCTGGTTCAGAACT+TGG | 0.368716 | 4_1:+73896577 | Msa0571290:CDS |
CTTGATACTCCCCGAGAACT+TGG | 0.369394 | 4_1:+73896415 | Msa0571290:CDS |
TCAGAGATCATCACATTTCC+GGG | 0.373245 | 4_1:+73896552 | Msa0571290:CDS |
CCGCAAGTTAGAGGAGGAAC+TGG | 0.375739 | 4_1:+73897539 | Msa0571290:CDS |
CAATGATACTTCATGTATAT+CGG | 0.381401 | 4_1:+73899310 | Msa0571290:CDS |
TTCAGAACTTGGTCTGAGTA+TGG | 0.384315 | 4_1:+73896588 | Msa0571290:CDS |
CATGTATATCGGAAGAAAAT+GGG | 0.384436 | 4_1:+73899321 | Msa0571290:CDS |
TCAATCCAAAATTGAGGAAC+TGG | 0.391550 | 4_1:+73898808 | Msa0571290:CDS |
TATATCTCCAGTGCTTAAAT+AGG | 0.392273 | 4_1:-73896073 | None:intergenic |
AAATTATCACCAGATCTTAC+TGG | 0.395449 | 4_1:-73900002 | None:intergenic |
AACTCAATGATAGGAGCTTA+AGG | 0.401210 | 4_1:+73896049 | Msa0571290:CDS |
AGACGATGAACAGAAAGAAT+TGG | 0.403642 | 4_1:+73897161 | Msa0571290:CDS |
CTAAGTCAGCTTCAAATCCT+TGG | 0.409289 | 4_1:-73897572 | None:intergenic |
GAACCAGATCCGCAAGTTAG+AGG | 0.409504 | 4_1:+73897530 | Msa0571290:CDS |
CTTCATTCTTCCACATTCTA+CGG | 0.410307 | 4_1:+73894864 | Msa0571290:five_prime_UTR |
CTCTACATCCGCTGCCTGAT+GGG | 0.410650 | 4_1:-73896656 | None:intergenic |
CTCAAGTAAGTGTGTCTCCT+TGG | 0.410803 | 4_1:-73897211 | None:intergenic |
TATTTCTTAGTCCAAGTTCT+CGG | 0.414133 | 4_1:-73896426 | None:intergenic |
CTCAAATTTGCAGAGGTAGA+AGG | 0.414746 | 4_1:+73899685 | Msa0571290:CDS |
ATTTCTTAGTCCAAGTTCTC+GGG | 0.415269 | 4_1:-73896425 | None:intergenic |
GGTACCCTTGCGATGGGCTT+AGG | 0.416438 | 4_1:-73899888 | None:intergenic |
TCTTCAGTTCATCGTTAAGA+TGG | 0.416884 | 4_1:-73898388 | None:intergenic |
TCTTCTTATTGATTAAACTT+TGG | 0.418786 | 4_1:+73894828 | Msa0571290:five_prime_UTR |
TCAGATGCAACAGATGTTGT+TGG | 0.420026 | 4_1:+73897917 | Msa0571290:CDS |
CTGAAGTTGCTGCTTTGGCC+AGG | 0.421147 | 4_1:+73896695 | Msa0571290:CDS |
TGAAACACATATCCAGAATC+TGG | 0.422058 | 4_1:+73897443 | Msa0571290:CDS |
TACAATTGCTTTGTTGAAGA+AGG | 0.422105 | 4_1:+73898190 | Msa0571290:CDS |
CATTTCCGGGACTGCTCAGC+TGG | 0.426590 | 4_1:+73896565 | Msa0571290:CDS |
TGTGGTGAGAAAGAGCACTA+TGG | 0.427495 | 4_1:-73899973 | None:intergenic |
TGCTTCTGTCAGCGCTCTCC+TGG | 0.429455 | 4_1:-73897763 | None:intergenic |
TCCCATCAAGAATTCTCATT+CGG | 0.430666 | 4_1:+73895672 | Msa0571290:CDS |
AGACATTTCTCCCTAAATCA+TGG | 0.435733 | 4_1:-73897125 | None:intergenic |
AAAATCAAAGGAGACTGCTT+TGG | 0.436264 | 4_1:+73898745 | Msa0571290:CDS |
GAAGGAGCACCATTTGTTGT+AGG | 0.436331 | 4_1:-73896460 | None:intergenic |
GTTTAACTAACTAACTTTGT+CGG | 0.436767 | 4_1:+73894990 | Msa0571290:five_prime_UTR |
TTAAGCACTGGAGATATAGA+TGG | 0.437350 | 4_1:+73896078 | Msa0571290:CDS |
AGAATTGGATGAGCTTGTTA+AGG | 0.441376 | 4_1:+73897176 | Msa0571290:CDS |
TAAGTCAGCTTCAAATCCTT+GGG | 0.449405 | 4_1:-73897571 | None:intergenic |
TCAAGTTCCGATGGAAGCTC+TGG | 0.453777 | 4_1:+73896391 | Msa0571290:CDS |
CTCTCAAGATGCCCTTCCTC+AGG | 0.456717 | 4_1:+73896627 | Msa0571290:CDS |
TCCAGCTCTTGTGTTTGCAT+TGG | 0.461122 | 4_1:-73896323 | None:intergenic |
ACATGGAACTTCAAACTCTT+CGG | 0.462481 | 4_1:+73896734 | Msa0571290:CDS |
CTGAACCAGCTGAGCAGTCC+CGG | 0.463105 | 4_1:-73896570 | None:intergenic |
AGTTGCTGCTTTGGCCAGGC+AGG | 0.463456 | 4_1:+73896699 | Msa0571290:CDS |
GGATGAATTCTCAAATTCTC+TGG | 0.465792 | 4_1:+73897488 | Msa0571290:CDS |
GTCTGACACATCCACCTGCC+TGG | 0.469758 | 4_1:-73896713 | None:intergenic |
GCCAATGCAAACACAAGAGC+TGG | 0.476631 | 4_1:+73896322 | Msa0571290:CDS |
AGCATCAACCCTACAACAAA+TGG | 0.478468 | 4_1:+73896451 | Msa0571290:CDS |
TGAAACAACTTAGGATTTGA+CGG | 0.482997 | 4_1:-73894954 | None:intergenic |
GCAGATGGAGCAGCTTGCAC+TGG | 0.486211 | 4_1:+73897299 | Msa0571290:CDS |
CTGGATTGAGTGCTGATTGT+AGG | 0.487970 | 4_1:+73896341 | Msa0571290:CDS |
AGAAGCAGAAATACCAGTAA+TGG | 0.488162 | 4_1:+73899543 | Msa0571290:CDS |
TCTCTACATCCGCTGCCTGA+TGG | 0.489393 | 4_1:-73896657 | None:intergenic |
CTTCAAAATCTTGCTGTGGA+TGG | 0.491798 | 4_1:+73896505 | Msa0571290:CDS |
TCCTCAGGAAAGTTCCCATC+AGG | 0.492264 | 4_1:+73896642 | Msa0571290:CDS |
GACCGGAAAATGAACTGTTC+CGG | 0.492804 | 4_1:-73894918 | None:intergenic |
ACCCTTGCGATGGGCTTAGG+AGG | 0.493007 | 4_1:-73899885 | None:intergenic |
AGCACGAGGAACAAGTTGGC+AGG | 0.494013 | 4_1:+73897979 | Msa0571290:CDS |
TTGAAGCTCTGAAGAGTGGC+TGG | 0.496987 | 4_1:-73896488 | None:intergenic |
TGCTGCTTTGGCCAGGCAGG+TGG | 0.498919 | 4_1:+73896702 | Msa0571290:CDS |
GAATGCTCTTCTCCTCCTCC+TGG | 0.498944 | 4_1:+73897408 | Msa0571290:CDS |
TTCGTTTGCGAAAAGATTTG+AGG | 0.499440 | 4_1:-73896855 | None:intergenic |
AGAAATCTTAAGTTCTGACT+TGG | 0.501338 | 4_1:+73898091 | Msa0571290:CDS |
AAGGAGCACCATTTGTTGTA+GGG | 0.503030 | 4_1:-73896459 | None:intergenic |
ATCGGAAGAAAATGGGGTTG+TGG | 0.503083 | 4_1:+73899328 | Msa0571290:CDS |
CAAAGCTTCCTCAGCTCGAA+TGG | 0.504131 | 4_1:-73897634 | None:intergenic |
CCATGAATTTGCATATAAGA+TGG | 0.504525 | 4_1:+73897347 | Msa0571290:CDS |
ATCAGTCAAAGCCGATTATG+AGG | 0.504634 | 4_1:+73897851 | Msa0571290:CDS |
ATCCGAATGAGAATTCTTGA+TGG | 0.505562 | 4_1:-73895674 | None:intergenic |
AACTGATTCTGAAACAACTT+AGG | 0.505841 | 4_1:-73894963 | None:intergenic |
TAACATTTGCAGAGAGGAGG+AGG | 0.507929 | 4_1:+73896005 | Msa0571290:intron |
TAAGAAGCCTCAAGAATGCT+AGG | 0.509109 | 4_1:+73899734 | Msa0571290:CDS |
AAATCAACTCAAGAAACAAT+CGG | 0.509218 | 4_1:+73897467 | Msa0571290:CDS |
GATGGGCTTAGGAGGGGAAA+AGG | 0.516795 | 4_1:-73899877 | None:intergenic |
AGCTTCTTCATATTTGGAGA+AGG | 0.518328 | 4_1:+73898775 | Msa0571290:CDS |
AACTTATGAAGAAATCACTT+GGG | 0.518685 | 4_1:+73898114 | Msa0571290:CDS |
ATGGTGAGATAGAGATGTAT+AGG | 0.523635 | 4_1:+73897253 | Msa0571290:CDS |
ATTATTCAACACTGGATCAC+CGG | 0.524285 | 4_1:+73894899 | Msa0571290:five_prime_UTR |
AGCCCTTCCTAGCATTCTTG+AGG | 0.524438 | 4_1:-73899741 | None:intergenic |
ATCGTAAAGGAAAGCAAAAG+AGG | 0.525734 | 4_1:+73896763 | Msa0571290:CDS |
AAGCCTCAAGAATGCTAGGA+AGG | 0.527879 | 4_1:+73899738 | Msa0571290:CDS |
AGTATGGACGGTTCAATACA+TGG | 0.528292 | 4_1:+73896604 | Msa0571290:CDS |
GGCTTCAAGAAGAATTCAAA+AGG | 0.530246 | 4_1:+73897694 | Msa0571290:CDS |
CTAATATGGTACCCTTGCGA+TGG | 0.532894 | 4_1:-73899895 | None:intergenic |
TCGTGTGCAGAAGAGACTAC+TGG | 0.533605 | 4_1:+73897794 | Msa0571290:CDS |
ATGCAAATGAGACGGCTACC+AGG | 0.533949 | 4_1:+73897745 | Msa0571290:CDS |
TTAAGGACCTATTTAAGCAC+TGG | 0.534125 | 4_1:+73896066 | Msa0571290:CDS |
ATTCATTCAAAATGTTCAGA+TGG | 0.538552 | 4_1:+73895021 | Msa0571290:exon |
GACACATGACAAAGTTAAGC+AGG | 0.540859 | 4_1:+73897602 | Msa0571290:CDS |
AGTGAGTAGCAGATCACAGT+TGG | 0.541748 | 4_1:+73896891 | Msa0571290:CDS |
GAAAGAAAGAGACAAATCAA+TGG | 0.549242 | 4_1:+73899618 | Msa0571290:CDS |
CAAGGATGAAGAGGAGAAAG+TGG | 0.551905 | 4_1:+73898256 | Msa0571290:CDS |
CCCCTCCTAAGCCCATCGCA+AGG | 0.551919 | 4_1:+73899883 | Msa0571290:three_prime_UTR |
AAAGGAAAGCAAAAGAGGGC+AGG | 0.553150 | 4_1:+73896768 | Msa0571290:CDS |
ACAATGTTTCCAGTAAGATC+TGG | 0.553306 | 4_1:+73899993 | Msa0571290:three_prime_UTR |
GATGGGAACTTTCCTGAGGA+AGG | 0.553879 | 4_1:-73896639 | None:intergenic |
GGAAGTTATCAGCTTGAAAG+AGG | 0.554330 | 4_1:+73896801 | Msa0571290:CDS |
AGAACTTCAATCCAAAATTG+AGG | 0.555244 | 4_1:+73898802 | Msa0571290:CDS |
CCCTTGCGATGGGCTTAGGA+GGG | 0.556299 | 4_1:-73899884 | None:intergenic |
GACATTTCTCCCTAAATCAT+GGG | 0.557392 | 4_1:-73897124 | None:intergenic |
GAACTTATGAAGAAATCACT+TGG | 0.557500 | 4_1:+73898113 | Msa0571290:CDS |
GCAGATCACAGTTGGAAGGT+GGG | 0.557866 | 4_1:+73896899 | Msa0571290:CDS |
TCTACATTATTATTCAACAC+TGG | 0.562223 | 4_1:+73894891 | Msa0571290:five_prime_UTR |
TAACGATGAACTGAAGAAGA+AGG | 0.562401 | 4_1:+73898394 | Msa0571290:CDS |
GTGCTTCAAACAGGTTGTTG+CGG | 0.562680 | 4_1:+73899226 | Msa0571290:intron |
TCTTCGGAAACAAATCGTAA+AGG | 0.563402 | 4_1:+73896750 | Msa0571290:CDS |
AAGTCATTTATACCAGGAGG+AGG | 0.563516 | 4_1:-73897420 | None:intergenic |
TTGTGGTGTCATCAGTCAAG+AGG | 0.564972 | 4_1:+73899345 | Msa0571290:CDS |
AGCAGATCACAGTTGGAAGG+TGG | 0.565007 | 4_1:+73896898 | Msa0571290:CDS |
AATTAACATTTGCAGAGAGG+AGG | 0.568188 | 4_1:+73896002 | Msa0571290:intron |
AATGCAGGTCTCAAGATGAC+AGG | 0.568544 | 4_1:-73899775 | None:intergenic |
GTGGTGAGAAAGAGCACTAT+GGG | 0.568619 | 4_1:-73899972 | None:intergenic |
AGATGAGTTAGAGATGCAGA+TGG | 0.572394 | 4_1:+73897284 | Msa0571290:CDS |
GCTGATTGTAGGACATCTAG+TGG | 0.573852 | 4_1:+73896352 | Msa0571290:CDS |
CTTATGCAACTATACAATGC+AGG | 0.578036 | 4_1:-73899790 | None:intergenic |
AGCCTCAAGAATGCTAGGAA+GGG | 0.578599 | 4_1:+73899739 | Msa0571290:CDS |
CTCATTTGCATCAAATGTAG+TGG | 0.579737 | 4_1:-73897733 | None:intergenic |
GGAAAGTTCCCATCAGGCAG+CGG | 0.580002 | 4_1:+73896648 | Msa0571290:CDS |
GTTTCAAAGTCATTTATACC+AGG | 0.583051 | 4_1:-73897426 | None:intergenic |
ACAAGAATTGAATCATGAGA+AGG | 0.583940 | 4_1:+73896951 | Msa0571290:CDS |
AAGACAGAGAGACAGACAAG+AGG | 0.586011 | 4_1:+73894728 | Msa0571290:five_prime_UTR |
CAAAAGGCTATCAATGCAGA+TGG | 0.586827 | 4_1:+73897710 | Msa0571290:CDS |
GATGCATCTCAAGGATGAAG+AGG | 0.587248 | 4_1:+73898247 | Msa0571290:CDS |
ATGGGAACTTTCCTGAGGAA+GGG | 0.587562 | 4_1:-73896638 | None:intergenic |
TCATGCGCTTCTGTATAGCA+CGG | 0.592043 | 4_1:-73894760 | None:intergenic |
ATACCAGTAATGGATAGTAA+TGG | 0.592797 | 4_1:+73899553 | Msa0571290:CDS |
TGAGGAACTGGAGGACAAAG+TGG | 0.595036 | 4_1:+73898820 | Msa0571290:CDS |
CATTCAAAATGTTCAGATGG+AGG | 0.595398 | 4_1:+73895024 | Msa0571290:exon |
CTGGTTCTCAAGAGACTCGA+TGG | 0.595679 | 4_1:-73897514 | None:intergenic |
CCAGTTCCTCCTCTAACTTG+CGG | 0.595754 | 4_1:-73897539 | None:intergenic |
GCAAAGAGCCATTCGAGCTG+AGG | 0.597598 | 4_1:+73897626 | Msa0571290:CDS |
AGTAGCAGATCACAGTTGGA+AGG | 0.599454 | 4_1:+73896895 | Msa0571290:CDS |
TCCGAATGAGAATTCTTGAT+GGG | 0.599669 | 4_1:-73895673 | None:intergenic |
TAATATGGTACCCTTGCGAT+GGG | 0.600673 | 4_1:-73899894 | None:intergenic |
GAAGAGTGGCTGGTGACTGA+AGG | 0.602498 | 4_1:-73896478 | None:intergenic |
TTTCCATCTCACTCTCACTC+AGG | 0.602795 | 4_1:+73895085 | Msa0571290:CDS |
AGAGCTTCAAAATCTTGCTG+TGG | 0.602851 | 4_1:+73896501 | Msa0571290:CDS |
ATCCAAAATTGAGGAACTGG+AGG | 0.603562 | 4_1:+73898811 | Msa0571290:CDS |
CCCTCCTAAGCCCATCGCAA+GGG | 0.603962 | 4_1:+73899884 | Msa0571290:three_prime_UTR |
CAGATCACAGTTGGAAGGTG+GGG | 0.604354 | 4_1:+73896900 | Msa0571290:CDS |
TGTAGAGGTTCCGTAGAATG+TGG | 0.606104 | 4_1:-73894874 | None:intergenic |
ATTACAATGTCAAGTTCCGA+TGG | 0.606268 | 4_1:+73896382 | Msa0571290:CDS |
CCTTGCGATGGGCTTAGGAG+GGG | 0.609611 | 4_1:-73899883 | None:intergenic |
AAATAGGATGATGCATCTCA+AGG | 0.610535 | 4_1:+73898238 | Msa0571290:CDS |
ACAGGACCTGATAAAATCAA+AGG | 0.611635 | 4_1:+73898733 | Msa0571290:intron |
CTGTTGCATCTGAACTGTCA+TGG | 0.612030 | 4_1:-73897907 | None:intergenic |
TACATTTGATGCAAATGAGA+CGG | 0.612659 | 4_1:+73897737 | Msa0571290:CDS |
GCACGAGGAACAAGTTGGCA+GGG | 0.612830 | 4_1:+73897980 | Msa0571290:CDS |
TCAGAGCATTGCTTTGCCAA+AGG | 0.613432 | 4_1:+73898853 | Msa0571290:CDS |
GAACTTGGTCTGAGTATGGA+CGG | 0.616193 | 4_1:+73896592 | Msa0571290:CDS |
GTACCTGAGTGAGAGTGAGA+TGG | 0.620724 | 4_1:-73895088 | None:intergenic |
GCAGGTGGATGTGTCAGACA+TGG | 0.623993 | 4_1:+73896717 | Msa0571290:CDS |
ATCAAGTCCAGAGCTTCCAT+CGG | 0.625295 | 4_1:-73896398 | None:intergenic |
AGTGTTGAATAATAATGTAG+AGG | 0.633418 | 4_1:-73894889 | None:intergenic |
TCAAAGTCATTTATACCAGG+AGG | 0.633961 | 4_1:-73897423 | None:intergenic |
GTAATGGATAGTAATGGCAA+TGG | 0.635117 | 4_1:+73899559 | Msa0571290:CDS |
TCGTAAAGGAAAGCAAAAGA+GGG | 0.638358 | 4_1:+73896764 | Msa0571290:CDS |
TTTCTTAGTCCAAGTTCTCG+GGG | 0.640293 | 4_1:-73896424 | None:intergenic |
ATGTATATCGGAAGAAAATG+GGG | 0.640455 | 4_1:+73899322 | Msa0571290:CDS |
AAGAGGGCAGGAGCTCGCAA+AGG | 0.640963 | 4_1:+73896780 | Msa0571290:CDS |
ATTCAGTTAAAACGTTGCTG+AGG | 0.645034 | 4_1:-73899585 | None:intergenic |
TAAGGATCAAAGCAGTGCCA+AGG | 0.648474 | 4_1:+73897194 | Msa0571290:CDS |
ACTTATGAAGAAATCACTTG+GGG | 0.649817 | 4_1:+73898115 | Msa0571290:CDS |
CCAGATCCGCAAGTTAGAGG+AGG | 0.652701 | 4_1:+73897533 | Msa0571290:CDS |
ATTACAGTTAAATAAGACAC+AGG | 0.657648 | 4_1:+73896993 | Msa0571290:CDS |
AATGAGTCTCAAATTTGCAG+AGG | 0.664150 | 4_1:+73899678 | Msa0571290:CDS |
TGTTGAAGAAGGAAGCAGAA+CGG | 0.665549 | 4_1:+73898201 | Msa0571290:CDS |
CAGGTCTCAAGATGACAGGA+AGG | 0.669022 | 4_1:-73899771 | None:intergenic |
AGATCTTACTGGAAACATTG+TGG | 0.671584 | 4_1:-73899991 | None:intergenic |
GCCTGATGGGAACTTTCCTG+AGG | 0.673014 | 4_1:-73896643 | None:intergenic |
AAGGATGAAGAGGAGAAAGT+GGG | 0.675953 | 4_1:+73898257 | Msa0571290:CDS |
GAACTGGAGAAACAAGCCCA+AGG | 0.679568 | 4_1:+73897555 | Msa0571290:CDS |
TCAAACACTAACATGCAAGA+CGG | 0.686206 | 4_1:-73895698 | None:intergenic |
GGAACTGGAGGACAAAGTGG+AGG | 0.698428 | 4_1:+73898823 | Msa0571290:CDS |
TGAGAATGAAAAGCTTACAG+TGG | 0.700759 | 4_1:+73898034 | Msa0571290:CDS |
TCTGCTCTAACATTGCATCG+AGG | 0.707967 | 4_1:-73897050 | None:intergenic |
AACAACTTAGGATTTGACGG+TGG | 0.713720 | 4_1:-73894951 | None:intergenic |
TGTGCAGAAGAGACTACTGG+AGG | 0.721029 | 4_1:+73897797 | Msa0571290:CDS |
AGTTGGCAGGGATTTCTCCG+AGG | 0.728439 | 4_1:+73897992 | Msa0571290:CDS |
AAAATGCTAATACTGCAGAG+AGG | 0.734559 | 4_1:+73897673 | Msa0571290:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTATTTTGTGATTTCAA+CGG | + | chr4_1:73895444-73895463 | Msa0571290:intron | 15.0% |
!!! | TCAAACATAATTTTAACAAT+GGG | - | chr4_1:73896256-73896275 | None:intergenic | 15.0% |
!!! | TTCAAACATAATTTTAACAA+TGG | - | chr4_1:73896257-73896276 | None:intergenic | 15.0% |
!!! | ATTTTTGTTTTTTGTTTTTG+CGG | + | chr4_1:73900021-73900040 | Msa0571290:three_prime_UTR | 15.0% |
!! | ATAAGAAGAAGAAGAATAAA+AGG | - | chr4_1:73894817-73894836 | None:intergenic | 20.0% |
!!! | TCTTCTTATTGATTAAACTT+TGG | + | chr4_1:73894828-73894847 | Msa0571290:five_prime_UTR | 20.0% |
!!! | AATGATGAACAATTTTGAAT+TGG | - | chr4_1:73895187-73895206 | None:intergenic | 20.0% |
!! | ACTAATGTTTGTATAATTTC+AGG | + | chr4_1:73895243-73895262 | Msa0571290:intron | 20.0% |
!!! | TTGATTGTGAATTTTTGATA+TGG | + | chr4_1:73895540-73895559 | Msa0571290:intron | 20.0% |
!! | TACAAGAAAATAGTGATAAA+AGG | + | chr4_1:73895879-73895898 | Msa0571290:CDS | 20.0% |
!! | TACAATAATGAATAATTCCT+TGG | - | chr4_1:73896149-73896168 | None:intergenic | 20.0% |
!! | TTTAGTCTGTTTGTAATTAT+TGG | - | chr4_1:73897100-73897119 | None:intergenic | 20.0% |
!!! | GATTCTTTTAAATATTCGAA+AGG | + | chr4_1:73898145-73898164 | Msa0571290:CDS | 20.0% |
!! | TAAGACAAATTATAAATGAC+AGG | - | chr4_1:73899008-73899027 | None:intergenic | 20.0% |
!!! | TGTCATTTATAATTTGTCTT+AGG | + | chr4_1:73899007-73899026 | Msa0571290:intron | 20.0% |
!! | ATATATATATATGTCTTGCT+TGG | + | chr4_1:73899115-73899134 | Msa0571290:intron | 20.0% |
!! | GTTATTGAATGGTTTATTTA+TGG | + | chr4_1:73899478-73899497 | Msa0571290:intron | 20.0% |
!! | AGTGTTGAATAATAATGTAG+AGG | - | chr4_1:73894892-73894911 | None:intergenic | 25.0% |
! | TCTACATTATTATTCAACAC+TGG | + | chr4_1:73894891-73894910 | Msa0571290:five_prime_UTR | 25.0% |
! | GTTTAACTAACTAACTTTGT+CGG | + | chr4_1:73894990-73895009 | Msa0571290:five_prime_UTR | 25.0% |
! | ATTCATTCAAAATGTTCAGA+TGG | + | chr4_1:73895021-73895040 | Msa0571290:exon | 25.0% |
!! | TTCATGATGGAAATTGTAAA+TGG | + | chr4_1:73895353-73895372 | Msa0571290:intron | 25.0% |
!! | TCATGATGGAAATTGTAAAT+GGG | + | chr4_1:73895354-73895373 | Msa0571290:intron | 25.0% |
! | AACTTAACAGTTTCATAAAC+AGG | - | chr4_1:73895385-73895404 | None:intergenic | 25.0% |
! | TGAAACTGTTAAGTTTAATC+AGG | + | chr4_1:73895390-73895409 | Msa0571290:intron | 25.0% |
!!! | TCTTTTTGTTGTTGACTTTT+TGG | + | chr4_1:73895495-73895514 | Msa0571290:intron | 25.0% |
!! | GAATTTTTGATATGGTTTCT+TGG | + | chr4_1:73895548-73895567 | Msa0571290:intron | 25.0% |
! | TTATCAAAAGCTAGTATCTT+TGG | + | chr4_1:73895589-73895608 | Msa0571290:CDS | 25.0% |
!!! | AGTTCTGATTTTTTGCTAAA+TGG | + | chr4_1:73895836-73895855 | Msa0571290:intron | 25.0% |
!! | AAATAGTGATAAAAGGTATG+TGG | + | chr4_1:73895886-73895905 | Msa0571290:intron | 25.0% |
!! | AATAGTGATAAAAGGTATGT+GGG | + | chr4_1:73895887-73895906 | Msa0571290:intron | 25.0% |
! | CAAAATCTATATCCAGAAAA+GGG | - | chr4_1:73895935-73895954 | None:intergenic | 25.0% |
! | TCAAAATCTATATCCAGAAA+AGG | - | chr4_1:73895936-73895955 | None:intergenic | 25.0% |
! | TCAATATATGTGTTGAGTAA+AGG | - | chr4_1:73896178-73896197 | None:intergenic | 25.0% |
!! | TTTTTCTTTCTAGATTTCAC+AGG | + | chr4_1:73896291-73896310 | Msa0571290:intron | 25.0% |
! | ATTACAGTTAAATAAGACAC+AGG | + | chr4_1:73896993-73897012 | Msa0571290:CDS | 25.0% |
! | AATGTTAGAGCAGAAAAATA+AGG | + | chr4_1:73897059-73897078 | Msa0571290:CDS | 25.0% |
! | AAATCAACTCAAGAAACAAT+CGG | + | chr4_1:73897467-73897486 | Msa0571290:CDS | 25.0% |
!!! | AGTATTAGCATTTTTAAGTC+TGG | - | chr4_1:73897667-73897686 | None:intergenic | 25.0% |
!! | ATTCAGTTTTACCTCATAAT+CGG | - | chr4_1:73897865-73897884 | None:intergenic | 25.0% |
! | AACTTATGAAGAAATCACTT+GGG | + | chr4_1:73898114-73898133 | Msa0571290:CDS | 25.0% |
! | AGTGAAAATAAAAATGCTTG+AGG | + | chr4_1:73898511-73898530 | Msa0571290:CDS | 25.0% |
!! | GGTAAATTTTCAAATCCTTT+TGG | + | chr4_1:73898532-73898551 | Msa0571290:intron | 25.0% |
! | TTATCAAGCATATTTCTCAA+AGG | - | chr4_1:73898573-73898592 | None:intergenic | 25.0% |
! | CTAGATGAAAATATCTATAG+AGG | - | chr4_1:73898609-73898628 | None:intergenic | 25.0% |
!!! | CTTAAGTTAGTTCTATCAAA+GGG | - | chr4_1:73898661-73898680 | None:intergenic | 25.0% |
!!! | ACTTAAGTTAGTTCTATCAA+AGG | - | chr4_1:73898662-73898681 | None:intergenic | 25.0% |
!!! | GCAACGATTGATAATATTTT+TGG | + | chr4_1:73899029-73899048 | Msa0571290:intron | 25.0% |
!!! | AAGGTTTTATCATGAATTGT+CGG | + | chr4_1:73899148-73899167 | Msa0571290:intron | 25.0% |
! | GCATATTTATTGCAGATATA+TGG | - | chr4_1:73899198-73899217 | None:intergenic | 25.0% |
! | CAATGATACTTCATGTATAT+CGG | + | chr4_1:73899310-73899329 | Msa0571290:CDS | 25.0% |
! | AAATTTATCAGTGTCACAAT+TGG | - | chr4_1:73899448-73899467 | None:intergenic | 25.0% |
TGAAACAACTTAGGATTTGA+CGG | - | chr4_1:73894957-73894976 | None:intergenic | 30.0% | |
!! | AACTGATTCTGAAACAACTT+AGG | - | chr4_1:73894966-73894985 | None:intergenic | 30.0% |
AGAATGATGAAGAAATGTGA+AGG | - | chr4_1:73895121-73895140 | None:intergenic | 30.0% | |
CACTAAATTTGCCATTCTTA+GGG | - | chr4_1:73895417-73895436 | None:intergenic | 30.0% | |
TCACTAAATTTGCCATTCTT+AGG | - | chr4_1:73895418-73895437 | None:intergenic | 30.0% | |
CCAAAATTTCAACAACTTGA+AGG | - | chr4_1:73895753-73895772 | None:intergenic | 30.0% | |
!!! | CCTTCAAGTTGTTGAAATTT+TGG | + | chr4_1:73895750-73895769 | Msa0571290:intron | 30.0% |
!!! | TGATTTTTTGCTAAATGGAC+AGG | + | chr4_1:73895841-73895860 | Msa0571290:intron | 30.0% |
! | ATAGTGATAAAAGGTATGTG+GGG | + | chr4_1:73895888-73895907 | Msa0571290:intron | 30.0% |
! | TTGATTATTTGACCCTTTTC+TGG | + | chr4_1:73895920-73895939 | Msa0571290:intron | 30.0% |
CATAAAAACAGTTGAGTATG+AGG | - | chr4_1:73895964-73895983 | None:intergenic | 30.0% | |
GTTAATTAACATTTGCAGAG+AGG | + | chr4_1:73895999-73896018 | Msa0571290:intron | 30.0% | |
! | CCTATCATTGAGTTTTTGTT+TGG | - | chr4_1:73896043-73896062 | None:intergenic | 30.0% |
CCAAACAAAAACTCAATGAT+AGG | + | chr4_1:73896040-73896059 | Msa0571290:CDS | 30.0% | |
TATATCTCCAGTGCTTAAAT+AGG | - | chr4_1:73896076-73896095 | None:intergenic | 30.0% | |
!! | AAAGTGATTCTTCTGAAGTA+AGG | + | chr4_1:73896109-73896128 | Msa0571290:intron | 30.0% |
TTAACAATGGGAATAGAAGA+AGG | - | chr4_1:73896244-73896263 | None:intergenic | 30.0% | |
TATTTCTTAGTCCAAGTTCT+CGG | - | chr4_1:73896429-73896448 | None:intergenic | 30.0% | |
TGTAGAGAATGAAAAACTCA+AGG | + | chr4_1:73896672-73896691 | Msa0571290:CDS | 30.0% | |
ACAAGAATTGAATCATGAGA+AGG | + | chr4_1:73896951-73896970 | Msa0571290:CDS | 30.0% | |
ACTAAAAACTCCCATGATTT+AGG | + | chr4_1:73897114-73897133 | Msa0571290:CDS | 30.0% | |
CTAAAAACTCCCATGATTTA+GGG | + | chr4_1:73897115-73897134 | Msa0571290:CDS | 30.0% | |
CTTACTTGAGCAAAAAATCA+CGG | + | chr4_1:73897224-73897243 | Msa0571290:CDS | 30.0% | |
!!! | GGACTATGAAATTTTGAAAC+AGG | + | chr4_1:73897320-73897339 | Msa0571290:CDS | 30.0% |
CCATCTTATATGCAAATTCA+TGG | - | chr4_1:73897350-73897369 | None:intergenic | 30.0% | |
CCATGAATTTGCATATAAGA+TGG | + | chr4_1:73897347-73897366 | Msa0571290:CDS | 30.0% | |
GTTTCAAAGTCATTTATACC+AGG | - | chr4_1:73897429-73897448 | None:intergenic | 30.0% | |
TACATTTGATGCAAATGAGA+CGG | + | chr4_1:73897737-73897756 | Msa0571290:CDS | 30.0% | |
!!! | TTTCTGATTTTCAAGTTGCA+TGG | - | chr4_1:73897958-73897977 | None:intergenic | 30.0% |
! | AGAAATCTTAAGTTCTGACT+TGG | + | chr4_1:73898091-73898110 | Msa0571290:CDS | 30.0% |
GAACTTATGAAGAAATCACT+TGG | + | chr4_1:73898113-73898132 | Msa0571290:CDS | 30.0% | |
ACTTATGAAGAAATCACTTG+GGG | + | chr4_1:73898115-73898134 | Msa0571290:CDS | 30.0% | |
! | TACAATTGCTTTGTTGAAGA+AGG | + | chr4_1:73898190-73898209 | Msa0571290:CDS | 30.0% |
CATCAATAAGAGAATGTTTC+AGG | - | chr4_1:73898331-73898350 | None:intergenic | 30.0% | |
!!! | AATGGTTTTAGTCTCAATGT+AGG | - | chr4_1:73898432-73898451 | None:intergenic | 30.0% |
!!! | ACTTTTTTGGTTAGTTGGAA+TGG | - | chr4_1:73898450-73898469 | None:intergenic | 30.0% |
!!! | GAAGAATTGAAGCACTTTTT+TGG | - | chr4_1:73898463-73898482 | None:intergenic | 30.0% |
!! | CAAAATGATTTGCTTATGAC+AGG | + | chr4_1:73898715-73898734 | Msa0571290:intron | 30.0% |
AGAACTTCAATCCAAAATTG+AGG | + | chr4_1:73898802-73898821 | Msa0571290:CDS | 30.0% | |
TGTACAAATTGGTATACCTT+TGG | - | chr4_1:73898872-73898891 | None:intergenic | 30.0% | |
! | AGTTTTACTACTACAAGTGA+CGG | + | chr4_1:73899254-73899273 | Msa0571290:CDS | 30.0% |
TCATGTATATCGGAAGAAAA+TGG | + | chr4_1:73899320-73899339 | Msa0571290:CDS | 30.0% | |
CATGTATATCGGAAGAAAAT+GGG | + | chr4_1:73899321-73899340 | Msa0571290:CDS | 30.0% | |
ATGTATATCGGAAGAAAATG+GGG | + | chr4_1:73899322-73899341 | Msa0571290:CDS | 30.0% | |
TATGTGTTCTTAATGCCATA+GGG | - | chr4_1:73899411-73899430 | None:intergenic | 30.0% | |
ATATGTGTTCTTAATGCCAT+AGG | - | chr4_1:73899412-73899431 | None:intergenic | 30.0% | |
TGTGAACTGAAGTTATTGAA+TGG | + | chr4_1:73899467-73899486 | Msa0571290:intron | 30.0% | |
!! | ATACCAGTAATGGATAGTAA+TGG | + | chr4_1:73899553-73899572 | Msa0571290:CDS | 30.0% |
GAAAGAAAGAGACAAATCAA+TGG | + | chr4_1:73899618-73899637 | Msa0571290:CDS | 30.0% | |
GCTATGATAACTCTCTAATA+TGG | - | chr4_1:73899912-73899931 | None:intergenic | 30.0% | |
AAATTATCACCAGATCTTAC+TGG | - | chr4_1:73900005-73900024 | None:intergenic | 30.0% | |
CTTCATTCTTCCACATTCTA+CGG | + | chr4_1:73894864-73894883 | Msa0571290:five_prime_UTR | 35.0% | |
ATTATTCAACACTGGATCAC+CGG | + | chr4_1:73894899-73894918 | Msa0571290:five_prime_UTR | 35.0% | |
CATTCAAAATGTTCAGATGG+AGG | + | chr4_1:73895024-73895043 | Msa0571290:exon | 35.0% | |
TCTATAGTTCCTGGAGATAA+TGG | + | chr4_1:73895298-73895317 | Msa0571290:intron | 35.0% | |
GCTTTCTCTAATCTTGTAGT+TGG | - | chr4_1:73895328-73895347 | None:intergenic | 35.0% | |
GAGAAAGCTATAGTTCATGA+TGG | + | chr4_1:73895340-73895359 | Msa0571290:intron | 35.0% | |
TTTAATCAGGACCCTAAGAA+TGG | + | chr4_1:73895403-73895422 | Msa0571290:intron | 35.0% | |
!! | TTCTTGGTTCTCTTTTGTGT+AGG | + | chr4_1:73895564-73895583 | Msa0571290:intron | 35.0% |
!! | TCTTGGTTCTCTTTTGTGTA+GGG | + | chr4_1:73895565-73895584 | Msa0571290:intron | 35.0% |
TCCCATCAAGAATTCTCATT+CGG | + | chr4_1:73895672-73895691 | Msa0571290:CDS | 35.0% | |
TCCGAATGAGAATTCTTGAT+GGG | - | chr4_1:73895676-73895695 | None:intergenic | 35.0% | |
ATCCGAATGAGAATTCTTGA+TGG | - | chr4_1:73895677-73895696 | None:intergenic | 35.0% | |
TCAAACACTAACATGCAAGA+CGG | - | chr4_1:73895701-73895720 | None:intergenic | 35.0% | |
AATTAACATTTGCAGAGAGG+AGG | + | chr4_1:73896002-73896021 | Msa0571290:intron | 35.0% | |
AACTCAATGATAGGAGCTTA+AGG | + | chr4_1:73896049-73896068 | Msa0571290:CDS | 35.0% | |
TTAAGGACCTATTTAAGCAC+TGG | + | chr4_1:73896066-73896085 | Msa0571290:CDS | 35.0% | |
!! | TTAAGCACTGGAGATATAGA+TGG | + | chr4_1:73896078-73896097 | Msa0571290:CDS | 35.0% |
TGAAGTAAGGTTTCACTCAT+TGG | + | chr4_1:73896122-73896141 | Msa0571290:intron | 35.0% | |
GAAGTAAGGTTTCACTCATT+GGG | + | chr4_1:73896123-73896142 | Msa0571290:intron | 35.0% | |
!!! | GACAACTTTTGCTCTAAGAA+AGG | - | chr4_1:73896211-73896230 | None:intergenic | 35.0% |
ATTACAATGTCAAGTTCCGA+TGG | + | chr4_1:73896382-73896401 | Msa0571290:CDS | 35.0% | |
ATTTCTTAGTCCAAGTTCTC+GGG | - | chr4_1:73896428-73896447 | None:intergenic | 35.0% | |
ATCAGAGATCATCACATTTC+CGG | + | chr4_1:73896551-73896570 | Msa0571290:CDS | 35.0% | |
ACATGGAACTTCAAACTCTT+CGG | + | chr4_1:73896734-73896753 | Msa0571290:CDS | 35.0% | |
TCTTCGGAAACAAATCGTAA+AGG | + | chr4_1:73896750-73896769 | Msa0571290:CDS | 35.0% | |
ATCGTAAAGGAAAGCAAAAG+AGG | + | chr4_1:73896763-73896782 | Msa0571290:CDS | 35.0% | |
TCGTAAAGGAAAGCAAAAGA+GGG | + | chr4_1:73896764-73896783 | Msa0571290:CDS | 35.0% | |
TTCGTTTGCGAAAAGATTTG+AGG | - | chr4_1:73896858-73896877 | None:intergenic | 35.0% | |
! | TCAAATCTTTTCGCAAACGA+AGG | + | chr4_1:73896857-73896876 | Msa0571290:CDS | 35.0% |
! | CAAATCTTTTCGCAAACGAA+GGG | + | chr4_1:73896858-73896877 | Msa0571290:CDS | 35.0% |
GACATTTCTCCCTAAATCAT+GGG | - | chr4_1:73897127-73897146 | None:intergenic | 35.0% | |
AGACATTTCTCCCTAAATCA+TGG | - | chr4_1:73897128-73897147 | None:intergenic | 35.0% | |
AGACGATGAACAGAAAGAAT+TGG | + | chr4_1:73897161-73897180 | Msa0571290:CDS | 35.0% | |
!! | AGAATTGGATGAGCTTGTTA+AGG | + | chr4_1:73897176-73897195 | Msa0571290:CDS | 35.0% |
CAAAAAATCACGGATCTCTA+TGG | + | chr4_1:73897234-73897253 | Msa0571290:CDS | 35.0% | |
ATGGTGAGATAGAGATGTAT+AGG | + | chr4_1:73897253-73897272 | Msa0571290:CDS | 35.0% | |
TCAAAGTCATTTATACCAGG+AGG | - | chr4_1:73897426-73897445 | None:intergenic | 35.0% | |
TGAAACACATATCCAGAATC+TGG | + | chr4_1:73897443-73897462 | Msa0571290:CDS | 35.0% | |
!!! | TGAGTTGATTTTCCAGATTC+TGG | - | chr4_1:73897458-73897477 | None:intergenic | 35.0% |
GGATGAATTCTCAAATTCTC+TGG | + | chr4_1:73897488-73897507 | Msa0571290:CDS | 35.0% | |
TAAGTCAGCTTCAAATCCTT+GGG | - | chr4_1:73897574-73897593 | None:intergenic | 35.0% | |
AAAATGCTAATACTGCAGAG+AGG | + | chr4_1:73897673-73897692 | Msa0571290:CDS | 35.0% | |
GGCTTCAAGAAGAATTCAAA+AGG | + | chr4_1:73897694-73897713 | Msa0571290:CDS | 35.0% | |
CTCATTTGCATCAAATGTAG+TGG | - | chr4_1:73897736-73897755 | None:intergenic | 35.0% | |
!!! | TGTCATGGCATCTTTTTTGT+TGG | - | chr4_1:73897895-73897914 | None:intergenic | 35.0% |
! | TGAAAATCAGAAAAAGCACG+AGG | + | chr4_1:73897965-73897984 | Msa0571290:CDS | 35.0% |
! | TTTTAGCAACTGAATCTCCT+CGG | - | chr4_1:73898012-73898031 | None:intergenic | 35.0% |
TGAGAATGAAAAGCTTACAG+TGG | + | chr4_1:73898034-73898053 | Msa0571290:CDS | 35.0% | |
AAATAGGATGATGCATCTCA+AGG | + | chr4_1:73898238-73898257 | Msa0571290:CDS | 35.0% | |
TCTTCAGTTCATCGTTAAGA+TGG | - | chr4_1:73898391-73898410 | None:intergenic | 35.0% | |
TAACGATGAACTGAAGAAGA+AGG | + | chr4_1:73898394-73898413 | Msa0571290:CDS | 35.0% | |
!!! | GAAGCACTTTTTTGGTTAGT+TGG | - | chr4_1:73898455-73898474 | None:intergenic | 35.0% |
! | TCTCAGATCTGTCATTTCTT+TGG | - | chr4_1:73898492-73898511 | None:intergenic | 35.0% |
!!! | TCAAATCCTTTTGGTTTGAG+CGG | + | chr4_1:73898541-73898560 | Msa0571290:intron | 35.0% |
ACAGGACCTGATAAAATCAA+AGG | + | chr4_1:73898733-73898752 | Msa0571290:intron | 35.0% | |
!! | CAGTCTCCTTTGATTTTATC+AGG | - | chr4_1:73898742-73898761 | None:intergenic | 35.0% |
AAAATCAAAGGAGACTGCTT+TGG | + | chr4_1:73898745-73898764 | Msa0571290:CDS | 35.0% | |
AGCATCAGCTTCTTCATATT+TGG | + | chr4_1:73898769-73898788 | Msa0571290:CDS | 35.0% | |
AGCTTCTTCATATTTGGAGA+AGG | + | chr4_1:73898775-73898794 | Msa0571290:CDS | 35.0% | |
TCAATCCAAAATTGAGGAAC+TGG | + | chr4_1:73898808-73898827 | Msa0571290:CDS | 35.0% | |
! | AAGTGTTGCGATGTACAAAT+TGG | - | chr4_1:73898883-73898902 | None:intergenic | 35.0% |
TATCAGTCATCAATGCACTT+TGG | - | chr4_1:73898958-73898977 | None:intergenic | 35.0% | |
CTTGCTTGGTATCTTGATTA+AGG | + | chr4_1:73899129-73899148 | Msa0571290:intron | 35.0% | |
CATTGTTATGTGCTTCAAAC+AGG | + | chr4_1:73899217-73899236 | Msa0571290:intron | 35.0% | |
ATGCCATAGGGAAGAAAAAA+GGG | - | chr4_1:73899399-73899418 | None:intergenic | 35.0% | |
AATGCCATAGGGAAGAAAAA+AGG | - | chr4_1:73899400-73899419 | None:intergenic | 35.0% | |
! | TATGGATCATTTTCTGTCCA+TGG | + | chr4_1:73899496-73899515 | Msa0571290:intron | 35.0% |
! | GGTATTTCTGCTTCTTTCTT+TGG | - | chr4_1:73899538-73899557 | None:intergenic | 35.0% |
AGAAGCAGAAATACCAGTAA+TGG | + | chr4_1:73899543-73899562 | Msa0571290:CDS | 35.0% | |
TTGCCATTACTATCCATTAC+TGG | - | chr4_1:73899559-73899578 | None:intergenic | 35.0% | |
!! | GTAATGGATAGTAATGGCAA+TGG | + | chr4_1:73899559-73899578 | Msa0571290:CDS | 35.0% |
ATTCAGTTAAAACGTTGCTG+AGG | - | chr4_1:73899588-73899607 | None:intergenic | 35.0% | |
AATGAGTCTCAAATTTGCAG+AGG | + | chr4_1:73899678-73899697 | Msa0571290:CDS | 35.0% | |
CTTATGCAACTATACAATGC+AGG | - | chr4_1:73899793-73899812 | None:intergenic | 35.0% | |
GCAGTTTGACAGAGTTTATA+AGG | + | chr4_1:73899930-73899949 | Msa0571290:three_prime_UTR | 35.0% | |
AGATCTTACTGGAAACATTG+TGG | - | chr4_1:73899994-73900013 | None:intergenic | 35.0% | |
ACAATGTTTCCAGTAAGATC+TGG | + | chr4_1:73899993-73900012 | Msa0571290:three_prime_UTR | 35.0% | |
AACAACTTAGGATTTGACGG+TGG | - | chr4_1:73894954-73894973 | None:intergenic | 40.0% | |
! | GAATTGGTCTCGAGATAAGT+TGG | - | chr4_1:73895171-73895190 | None:intergenic | 40.0% |
! | TAATTTCAGGTGCTGCAATC+TGG | + | chr4_1:73895256-73895275 | Msa0571290:intron | 40.0% |
TTGGTACTCTCTATAGTTCC+TGG | + | chr4_1:73895289-73895308 | Msa0571290:intron | 40.0% | |
!!! | GTTGGTTTTCCATTATCTCC+AGG | - | chr4_1:73895310-73895329 | None:intergenic | 40.0% |
CAATGGGAATAGAAGAAGGA+TGG | - | chr4_1:73896240-73896259 | None:intergenic | 40.0% | |
TTTCTTAGTCCAAGTTCTCG+GGG | - | chr4_1:73896427-73896446 | None:intergenic | 40.0% | |
AGCATCAACCCTACAACAAA+TGG | + | chr4_1:73896451-73896470 | Msa0571290:CDS | 40.0% | |
!! | AAGGAGCACCATTTGTTGTA+GGG | - | chr4_1:73896462-73896481 | None:intergenic | 40.0% |
!!! | GATTTTGAAGCTCTGAAGAG+TGG | - | chr4_1:73896495-73896514 | None:intergenic | 40.0% |
AGAGCTTCAAAATCTTGCTG+TGG | + | chr4_1:73896501-73896520 | Msa0571290:CDS | 40.0% | |
! | CTTCAAAATCTTGCTGTGGA+TGG | + | chr4_1:73896505-73896524 | Msa0571290:CDS | 40.0% |
TCAGAGATCATCACATTTCC+GGG | + | chr4_1:73896552-73896571 | Msa0571290:CDS | 40.0% | |
TTCAGAACTTGGTCTGAGTA+TGG | + | chr4_1:73896588-73896607 | Msa0571290:CDS | 40.0% | |
AGTATGGACGGTTCAATACA+TGG | + | chr4_1:73896604-73896623 | Msa0571290:CDS | 40.0% | |
GGAAGTTATCAGCTTGAAAG+AGG | + | chr4_1:73896801-73896820 | Msa0571290:CDS | 40.0% | |
!! | TGAACTAGTTCTTGCTGTTC+AGG | + | chr4_1:73897026-73897045 | Msa0571290:CDS | 40.0% |
AGATGAGTTAGAGATGCAGA+TGG | + | chr4_1:73897284-73897303 | Msa0571290:CDS | 40.0% | |
AAGTCATTTATACCAGGAGG+AGG | - | chr4_1:73897423-73897442 | None:intergenic | 40.0% | |
CTAAGTCAGCTTCAAATCCT+TGG | - | chr4_1:73897575-73897594 | None:intergenic | 40.0% | |
GACACATGACAAAGTTAAGC+AGG | + | chr4_1:73897602-73897621 | Msa0571290:CDS | 40.0% | |
CAAAAGGCTATCAATGCAGA+TGG | + | chr4_1:73897710-73897729 | Msa0571290:CDS | 40.0% | |
ATCAGTCAAAGCCGATTATG+AGG | + | chr4_1:73897851-73897870 | Msa0571290:CDS | 40.0% | |
TCAGATGCAACAGATGTTGT+TGG | + | chr4_1:73897917-73897936 | Msa0571290:CDS | 40.0% | |
! | AAAAAGCACGAGGAACAAGT+TGG | + | chr4_1:73897975-73897994 | Msa0571290:CDS | 40.0% |
TGTTGAAGAAGGAAGCAGAA+CGG | + | chr4_1:73898201-73898220 | Msa0571290:CDS | 40.0% | |
GGTCACTTGATGAGCTAAAT+AGG | + | chr4_1:73898222-73898241 | Msa0571290:CDS | 40.0% | |
AAGGATGAAGAGGAGAAAGT+GGG | + | chr4_1:73898257-73898276 | Msa0571290:CDS | 40.0% | |
ATCCAAAATTGAGGAACTGG+AGG | + | chr4_1:73898811-73898830 | Msa0571290:CDS | 40.0% | |
CTCAAATTTGCAGAGGTAGA+AGG | + | chr4_1:73899685-73899704 | Msa0571290:CDS | 40.0% | |
TAAGAAGCCTCAAGAATGCT+AGG | + | chr4_1:73899734-73899753 | Msa0571290:CDS | 40.0% | |
TAATATGGTACCCTTGCGAT+GGG | - | chr4_1:73899897-73899916 | None:intergenic | 40.0% | |
AAGACAGAGAGACAGACAAG+AGG | + | chr4_1:73894728-73894747 | Msa0571290:five_prime_UTR | 45.0% | |
TCATGCGCTTCTGTATAGCA+CGG | - | chr4_1:73894763-73894782 | None:intergenic | 45.0% | |
TGTAGAGGTTCCGTAGAATG+TGG | - | chr4_1:73894877-73894896 | None:intergenic | 45.0% | |
! | CACCGGAACAGTTCATTTTC+CGG | + | chr4_1:73894916-73894935 | Msa0571290:five_prime_UTR | 45.0% |
GACCGGAAAATGAACTGTTC+CGG | - | chr4_1:73894921-73894940 | None:intergenic | 45.0% | |
! | ACAGTTCATTTTCCGGTCAC+CGG | + | chr4_1:73894923-73894942 | Msa0571290:five_prime_UTR | 45.0% |
!! | GGATTTGACGGTGGATTTTC+CGG | - | chr4_1:73894945-73894964 | None:intergenic | 45.0% |
TTTCCATCTCACTCTCACTC+AGG | + | chr4_1:73895085-73895104 | Msa0571290:CDS | 45.0% | |
ATCTCACTCTCACTCAGGTA+CGG | + | chr4_1:73895090-73895109 | Msa0571290:intron | 45.0% | |
GCAATCTGGTGTGGATTCTT+TGG | + | chr4_1:73895270-73895289 | Msa0571290:intron | 45.0% | |
TAACATTTGCAGAGAGGAGG+AGG | + | chr4_1:73896005-73896024 | Msa0571290:intron | 45.0% | |
TCCAGCTCTTGTGTTTGCAT+TGG | - | chr4_1:73896326-73896345 | None:intergenic | 45.0% | |
!! | CTGGATTGAGTGCTGATTGT+AGG | + | chr4_1:73896341-73896360 | Msa0571290:CDS | 45.0% |
GCTGATTGTAGGACATCTAG+TGG | + | chr4_1:73896352-73896371 | Msa0571290:CDS | 45.0% | |
ATCAAGTCCAGAGCTTCCAT+CGG | - | chr4_1:73896401-73896420 | None:intergenic | 45.0% | |
!! | GAAGGAGCACCATTTGTTGT+AGG | - | chr4_1:73896463-73896482 | None:intergenic | 45.0% |
GAACTTGGTCTGAGTATGGA+CGG | + | chr4_1:73896592-73896611 | Msa0571290:CDS | 45.0% | |
ATGGGAACTTTCCTGAGGAA+GGG | - | chr4_1:73896641-73896660 | None:intergenic | 45.0% | |
AAAGGAAAGCAAAAGAGGGC+AGG | + | chr4_1:73896768-73896787 | Msa0571290:CDS | 45.0% | |
! | TTTTCGCAAACGAAGGGATG+AGG | + | chr4_1:73896864-73896883 | Msa0571290:CDS | 45.0% |
AGTGAGTAGCAGATCACAGT+TGG | + | chr4_1:73896891-73896910 | Msa0571290:CDS | 45.0% | |
AGTAGCAGATCACAGTTGGA+AGG | + | chr4_1:73896895-73896914 | Msa0571290:CDS | 45.0% | |
TCTGCTCTAACATTGCATCG+AGG | - | chr4_1:73897053-73897072 | None:intergenic | 45.0% | |
TAAGGATCAAAGCAGTGCCA+AGG | + | chr4_1:73897194-73897213 | Msa0571290:CDS | 45.0% | |
CTCAAGTAAGTGTGTCTCCT+TGG | - | chr4_1:73897214-73897233 | None:intergenic | 45.0% | |
CTGTTGCATCTGAACTGTCA+TGG | - | chr4_1:73897910-73897929 | None:intergenic | 45.0% | |
GATGCATCTCAAGGATGAAG+AGG | + | chr4_1:73898247-73898266 | Msa0571290:CDS | 45.0% | |
CAAGGATGAAGAGGAGAAAG+TGG | + | chr4_1:73898256-73898275 | Msa0571290:CDS | 45.0% | |
!!! | TCCTTTTGGTTTGAGCGGAT+AGG | + | chr4_1:73898546-73898565 | Msa0571290:intron | 45.0% |
ACCTATCCGCTCAAACCAAA+AGG | - | chr4_1:73898550-73898569 | None:intergenic | 45.0% | |
GAGATCTGACAGTTGAGTGA+TGG | + | chr4_1:73898684-73898703 | Msa0571290:intron | 45.0% | |
! | GTCCTCCAGTTCCTCAATTT+TGG | - | chr4_1:73898816-73898835 | None:intergenic | 45.0% |
!! | TCAGAGCATTGCTTTGCCAA+AGG | + | chr4_1:73898853-73898872 | Msa0571290:CDS | 45.0% |
CAGTCATCAATGCACTTTGG+TGG | - | chr4_1:73898955-73898974 | None:intergenic | 45.0% | |
GTGCTTCAAACAGGTTGTTG+CGG | + | chr4_1:73899226-73899245 | Msa0571290:intron | 45.0% | |
ATCGGAAGAAAATGGGGTTG+TGG | + | chr4_1:73899328-73899347 | Msa0571290:CDS | 45.0% | |
!! | TTGTGGTGTCATCAGTCAAG+AGG | + | chr4_1:73899345-73899364 | Msa0571290:CDS | 45.0% |
!!! | ACGCCCTTTTTTCTTCCCTA+TGG | + | chr4_1:73899393-73899412 | Msa0571290:intron | 45.0% |
AAGCCTCAAGAATGCTAGGA+AGG | + | chr4_1:73899738-73899757 | Msa0571290:CDS | 45.0% | |
AGCCTCAAGAATGCTAGGAA+GGG | + | chr4_1:73899739-73899758 | Msa0571290:CDS | 45.0% | |
AATGCAGGTCTCAAGATGAC+AGG | - | chr4_1:73899778-73899797 | None:intergenic | 45.0% | |
CTAATATGGTACCCTTGCGA+TGG | - | chr4_1:73899898-73899917 | None:intergenic | 45.0% | |
!! | GTGGTGAGAAAGAGCACTAT+GGG | - | chr4_1:73899975-73899994 | None:intergenic | 45.0% |
!! | TGTGGTGAGAAAGAGCACTA+TGG | - | chr4_1:73899976-73899995 | None:intergenic | 45.0% |
GTACCTGAGTGAGAGTGAGA+TGG | - | chr4_1:73895091-73895110 | None:intergenic | 50.0% | |
AGGTTTCACTCATTGGGCCA+AGG | + | chr4_1:73896129-73896148 | Msa0571290:intron | 50.0% | |
GCCAATGCAAACACAAGAGC+TGG | + | chr4_1:73896322-73896341 | Msa0571290:CDS | 50.0% | |
TCAAGTTCCGATGGAAGCTC+TGG | + | chr4_1:73896391-73896410 | Msa0571290:CDS | 50.0% | |
CTTGATACTCCCCGAGAACT+TGG | + | chr4_1:73896415-73896434 | Msa0571290:CDS | 50.0% | |
!! | TTGAAGCTCTGAAGAGTGGC+TGG | - | chr4_1:73896491-73896510 | None:intergenic | 50.0% |
! | TGCTCAGCTGGTTCAGAACT+TGG | + | chr4_1:73896577-73896596 | Msa0571290:CDS | 50.0% |
GATGGGAACTTTCCTGAGGA+AGG | - | chr4_1:73896642-73896661 | None:intergenic | 50.0% | |
TCCTCAGGAAAGTTCCCATC+AGG | + | chr4_1:73896642-73896661 | Msa0571290:CDS | 50.0% | |
! | CAAGGCTGAAGTTGCTGCTT+TGG | + | chr4_1:73896690-73896709 | Msa0571290:CDS | 50.0% |
AGCAGATCACAGTTGGAAGG+TGG | + | chr4_1:73896898-73896917 | Msa0571290:CDS | 50.0% | |
GCAGATCACAGTTGGAAGGT+GGG | + | chr4_1:73896899-73896918 | Msa0571290:CDS | 50.0% | |
CAGATCACAGTTGGAAGGTG+GGG | + | chr4_1:73896900-73896919 | Msa0571290:CDS | 50.0% | |
! | CTGGTTCTCAAGAGACTCGA+TGG | - | chr4_1:73897517-73897536 | None:intergenic | 50.0% |
GAACCAGATCCGCAAGTTAG+AGG | + | chr4_1:73897530-73897549 | Msa0571290:CDS | 50.0% | |
CCAGTTCCTCCTCTAACTTG+CGG | - | chr4_1:73897542-73897561 | None:intergenic | 50.0% | |
GAACTGGAGAAACAAGCCCA+AGG | + | chr4_1:73897555-73897574 | Msa0571290:CDS | 50.0% | |
CAAAGCTTCCTCAGCTCGAA+TGG | - | chr4_1:73897637-73897656 | None:intergenic | 50.0% | |
ATGCAAATGAGACGGCTACC+AGG | + | chr4_1:73897745-73897764 | Msa0571290:CDS | 50.0% | |
TCGTGTGCAGAAGAGACTAC+TGG | + | chr4_1:73897794-73897813 | Msa0571290:CDS | 50.0% | |
TGTGCAGAAGAGACTACTGG+AGG | + | chr4_1:73897797-73897816 | Msa0571290:CDS | 50.0% | |
TGAGGAACTGGAGGACAAAG+TGG | + | chr4_1:73898820-73898839 | Msa0571290:CDS | 50.0% | |
GCAAATGTGCATGACTGCCA+TGG | - | chr4_1:73899516-73899535 | None:intergenic | 50.0% | |
AGCCCTTCCTAGCATTCTTG+AGG | - | chr4_1:73899744-73899763 | None:intergenic | 50.0% | |
CAGGTCTCAAGATGACAGGA+AGG | - | chr4_1:73899774-73899793 | None:intergenic | 50.0% | |
!! | ACGGTGGATTTTCCGGTGAC+CGG | - | chr4_1:73894938-73894957 | None:intergenic | 55.0% |
! | TCAGGTGCTGCAATCTGGTG+TGG | + | chr4_1:73895261-73895280 | Msa0571290:intron | 55.0% |
GAAGAGTGGCTGGTGACTGA+AGG | - | chr4_1:73896481-73896500 | None:intergenic | 55.0% | |
CTCTCAAGATGCCCTTCCTC+AGG | + | chr4_1:73896627-73896646 | Msa0571290:CDS | 55.0% | |
GCCTGATGGGAACTTTCCTG+AGG | - | chr4_1:73896646-73896665 | None:intergenic | 55.0% | |
GGAAAGTTCCCATCAGGCAG+CGG | + | chr4_1:73896648-73896667 | Msa0571290:CDS | 55.0% | |
CTCTACATCCGCTGCCTGAT+GGG | - | chr4_1:73896659-73896678 | None:intergenic | 55.0% | |
TCTCTACATCCGCTGCCTGA+TGG | - | chr4_1:73896660-73896679 | None:intergenic | 55.0% | |
!! | CTGAAGTTGCTGCTTTGGCC+AGG | + | chr4_1:73896695-73896714 | Msa0571290:CDS | 55.0% |
GCAGGTGGATGTGTCAGACA+TGG | + | chr4_1:73896717-73896736 | Msa0571290:CDS | 55.0% | |
GAATGCTCTTCTCCTCCTCC+TGG | + | chr4_1:73897408-73897427 | Msa0571290:CDS | 55.0% | |
! | CCTCCTCTAACTTGCGGATC+TGG | - | chr4_1:73897536-73897555 | None:intergenic | 55.0% |
CCAGATCCGCAAGTTAGAGG+AGG | + | chr4_1:73897533-73897552 | Msa0571290:CDS | 55.0% | |
CCGCAAGTTAGAGGAGGAAC+TGG | + | chr4_1:73897539-73897558 | Msa0571290:CDS | 55.0% | |
GCAAAGAGCCATTCGAGCTG+AGG | + | chr4_1:73897626-73897645 | Msa0571290:CDS | 55.0% | |
! | AGCACGAGGAACAAGTTGGC+AGG | + | chr4_1:73897979-73897998 | Msa0571290:CDS | 55.0% |
! | GCACGAGGAACAAGTTGGCA+GGG | + | chr4_1:73897980-73897999 | Msa0571290:CDS | 55.0% |
AGTTGGCAGGGATTTCTCCG+AGG | + | chr4_1:73897992-73898011 | Msa0571290:CDS | 55.0% | |
GGAACTGGAGGACAAAGTGG+AGG | + | chr4_1:73898823-73898842 | Msa0571290:CDS | 55.0% | |
! | GATGGGCTTAGGAGGGGAAA+AGG | - | chr4_1:73899880-73899899 | None:intergenic | 55.0% |
CATTTCCGGGACTGCTCAGC+TGG | + | chr4_1:73896565-73896584 | Msa0571290:CDS | 60.0% | |
CTGAACCAGCTGAGCAGTCC+CGG | - | chr4_1:73896573-73896592 | None:intergenic | 60.0% | |
!! | AGTTGCTGCTTTGGCCAGGC+AGG | + | chr4_1:73896699-73896718 | Msa0571290:CDS | 60.0% |
GTCTGACACATCCACCTGCC+TGG | - | chr4_1:73896716-73896735 | None:intergenic | 60.0% | |
AAGAGGGCAGGAGCTCGCAA+AGG | + | chr4_1:73896780-73896799 | Msa0571290:CDS | 60.0% | |
GCAGATGGAGCAGCTTGCAC+TGG | + | chr4_1:73897299-73897318 | Msa0571290:CDS | 60.0% | |
TGCTTCTGTCAGCGCTCTCC+TGG | - | chr4_1:73897766-73897785 | None:intergenic | 60.0% | |
! | CCTTGCGATGGGCTTAGGAG+GGG | - | chr4_1:73899886-73899905 | None:intergenic | 60.0% |
! | CCCTTGCGATGGGCTTAGGA+GGG | - | chr4_1:73899887-73899906 | None:intergenic | 60.0% |
CCCTCCTAAGCCCATCGCAA+GGG | + | chr4_1:73899884-73899903 | Msa0571290:three_prime_UTR | 60.0% | |
! | ACCCTTGCGATGGGCTTAGG+AGG | - | chr4_1:73899888-73899907 | None:intergenic | 60.0% |
! | GGTACCCTTGCGATGGGCTT+AGG | - | chr4_1:73899891-73899910 | None:intergenic | 60.0% |
!! | TGCTGCTTTGGCCAGGCAGG+TGG | + | chr4_1:73896702-73896721 | Msa0571290:CDS | 65.0% |
CCCCTCCTAAGCCCATCGCA+AGG | + | chr4_1:73899883-73899902 | Msa0571290:three_prime_UTR | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 73894708 | 73900157 | 73894708 | ID=Msa0571290;Name=Msa0571290 |
chr4_1 | mRNA | 73894708 | 73900157 | 73894708 | ID=Msa0571290-mRNA-1;Parent=Msa0571290;Name=Msa0571290-mRNA-1;_AED=0.06;_eAED=0.06;_QI=324|0.85|1|1|1|1|8|392|1027 |
chr4_1 | exon | 73894708 | 73895106 | 73894708 | ID=Msa0571290-mRNA-1:exon:25390;Parent=Msa0571290-mRNA-1 |
chr4_1 | exon | 73895586 | 73895708 | 73895586 | ID=Msa0571290-mRNA-1:exon:25391;Parent=Msa0571290-mRNA-1 |
chr4_1 | exon | 73895863 | 73895900 | 73895863 | ID=Msa0571290-mRNA-1:exon:25392;Parent=Msa0571290-mRNA-1 |
chr4_1 | exon | 73896017 | 73896125 | 73896017 | ID=Msa0571290-mRNA-1:exon:25393;Parent=Msa0571290-mRNA-1 |
chr4_1 | exon | 73896304 | 73898532 | 73896304 | ID=Msa0571290-mRNA-1:exon:25394;Parent=Msa0571290-mRNA-1 |
chr4_1 | exon | 73898737 | 73898874 | 73898737 | ID=Msa0571290-mRNA-1:exon:25395;Parent=Msa0571290-mRNA-1 |
chr4_1 | exon | 73899239 | 73899366 | 73899239 | ID=Msa0571290-mRNA-1:exon:25396;Parent=Msa0571290-mRNA-1 |
chr4_1 | exon | 73899522 | 73900157 | 73899522 | ID=Msa0571290-mRNA-1:exon:25397;Parent=Msa0571290-mRNA-1 |
chr4_1 | five_prime_UTR | 73894708 | 73895031 | 73894708 | ID=Msa0571290-mRNA-1:five_prime_utr;Parent=Msa0571290-mRNA-1 |
chr4_1 | CDS | 73895032 | 73895106 | 73895032 | ID=Msa0571290-mRNA-1:cds;Parent=Msa0571290-mRNA-1 |
chr4_1 | CDS | 73895586 | 73895708 | 73895586 | ID=Msa0571290-mRNA-1:cds;Parent=Msa0571290-mRNA-1 |
chr4_1 | CDS | 73895863 | 73895900 | 73895863 | ID=Msa0571290-mRNA-1:cds;Parent=Msa0571290-mRNA-1 |
chr4_1 | CDS | 73896017 | 73896125 | 73896017 | ID=Msa0571290-mRNA-1:cds;Parent=Msa0571290-mRNA-1 |
chr4_1 | CDS | 73896304 | 73898532 | 73896304 | ID=Msa0571290-mRNA-1:cds;Parent=Msa0571290-mRNA-1 |
chr4_1 | CDS | 73898737 | 73898874 | 73898737 | ID=Msa0571290-mRNA-1:cds;Parent=Msa0571290-mRNA-1 |
chr4_1 | CDS | 73899239 | 73899366 | 73899239 | ID=Msa0571290-mRNA-1:cds;Parent=Msa0571290-mRNA-1 |
chr4_1 | CDS | 73899522 | 73899765 | 73899522 | ID=Msa0571290-mRNA-1:cds;Parent=Msa0571290-mRNA-1 |
chr4_1 | three_prime_UTR | 73899766 | 73900157 | 73899766 | ID=Msa0571290-mRNA-1:three_prime_utr;Parent=Msa0571290-mRNA-1 |
Gene Sequence |
Protein sequence |