Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476650 | GAU27031.1 | 77.679 | 448 | 63 | 8 | 1 | 414 | 1 | 445 | 0.0 | 610 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476650 | sp|Q9CAG5|PUB7_ARATH | 30.222 | 225 | 141 | 5 | 99 | 319 | 500 | 712 | 3.83e-20 | 96.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476650 | A0A2Z6M4E2 | 77.679 | 448 | 63 | 8 | 1 | 414 | 1 | 445 | 0.0 | 610 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa0476650 | 0.844498 | 7.282538e-59 | -8.615850e-47 |
| Msa0000510 | Msa0476650 | 0.800466 | 1.422500e-48 | -8.615850e-47 |
| Msa0001940 | Msa0476650 | 0.814586 | 1.428568e-51 | -8.615850e-47 |
| Msa0002580 | Msa0476650 | 0.809494 | 1.840733e-50 | -8.615850e-47 |
| Msa0005890 | Msa0476650 | 0.823508 | 1.333891e-53 | -8.615850e-47 |
| Msa0017950 | Msa0476650 | 0.809265 | 2.060899e-50 | -8.615850e-47 |
| Msa0018160 | Msa0476650 | 0.821886 | 3.180795e-53 | -8.615850e-47 |
| Msa0024000 | Msa0476650 | 0.816094 | 6.600373e-52 | -8.615850e-47 |
| Msa0025580 | Msa0476650 | 0.823829 | 1.121882e-53 | -8.615850e-47 |
| Msa0027230 | Msa0476650 | 0.800057 | 1.722530e-48 | -8.615850e-47 |
| Msa0027280 | Msa0476650 | 0.815694 | 8.106568e-52 | -8.615850e-47 |
| Msa0028420 | Msa0476650 | 0.833184 | 6.168953e-56 | -8.615850e-47 |
| Msa0032920 | Msa0476650 | -0.802874 | 4.561263e-49 | -8.615850e-47 |
| Msa0032960 | Msa0476650 | -0.804520 | 2.076660e-49 | -8.615850e-47 |
| Msa0035060 | Msa0476650 | 0.813062 | 3.095987e-51 | -8.615850e-47 |
| Msa0035340 | Msa0476650 | 0.828366 | 9.356596e-55 | -8.615850e-47 |
| Msa0036870 | Msa0476650 | 0.824468 | 7.942997e-54 | -8.615850e-47 |
| Msa0039600 | Msa0476650 | 0.802886 | 4.534451e-49 | -8.615850e-47 |
| Msa0042610 | Msa0476650 | 0.808702 | 2.720580e-50 | -8.615850e-47 |
| Msa0042640 | Msa0476650 | 0.808454 | 3.073511e-50 | -8.615850e-47 |
| Msa0048510 | Msa0476650 | 0.830102 | 3.548498e-55 | -8.615850e-47 |
| Msa0050660 | Msa0476650 | 0.805687 | 1.183340e-49 | -8.615850e-47 |
| Msa0050700 | Msa0476650 | 0.806206 | 9.206656e-50 | -8.615850e-47 |
| Msa0050790 | Msa0476650 | 0.813344 | 2.684011e-51 | -8.615850e-47 |
| Msa0051020 | Msa0476650 | 0.805512 | 1.288222e-49 | -8.615850e-47 |
| Msa0075220 | Msa0476650 | 0.816047 | 6.763942e-52 | -8.615850e-47 |
| Msa0081090 | Msa0476650 | 0.811252 | 7.681669e-51 | -8.615850e-47 |
| Msa0081390 | Msa0476650 | 0.825052 | 5.783577e-54 | -8.615850e-47 |
| Msa0081450 | Msa0476650 | 0.828854 | 7.133645e-55 | -8.615850e-47 |
| Msa0081980 | Msa0476650 | 0.805308 | 1.421257e-49 | -8.615850e-47 |
| Msa0089630 | Msa0476650 | 0.802504 | 5.438209e-49 | -8.615850e-47 |
| Msa0090400 | Msa0476650 | 0.862678 | 4.275018e-64 | -8.615850e-47 |
| Msa0092790 | Msa0476650 | 0.804243 | 2.371809e-49 | -8.615850e-47 |
| Msa0094780 | Msa0476650 | 0.827057 | 1.930666e-54 | -8.615850e-47 |
| Msa0098040 | Msa0476650 | 0.816187 | 6.292142e-52 | -8.615850e-47 |
| Msa0101270 | Msa0476650 | 0.803584 | 3.250958e-49 | -8.615850e-47 |
| Msa0108410 | Msa0476650 | 0.803100 | 4.095833e-49 | -8.615850e-47 |
| Msa0117480 | Msa0476650 | 0.809755 | 1.617286e-50 | -8.615850e-47 |
| Msa0124060 | Msa0476650 | 0.820545 | 6.483114e-53 | -8.615850e-47 |
| Msa0136650 | Msa0476650 | 0.809144 | 2.187763e-50 | -8.615850e-47 |
| Msa0137880 | Msa0476650 | 0.870750 | 1.152822e-66 | -8.615850e-47 |
| Msa0140280 | Msa0476650 | 0.838613 | 2.592263e-57 | -8.615850e-47 |
| Msa0146040 | Msa0476650 | 0.819053 | 1.421374e-52 | -8.615850e-47 |
| Msa0158860 | Msa0476650 | 0.804014 | 2.647614e-49 | -8.615850e-47 |
| Msa0167520 | Msa0476650 | 0.828913 | 6.900249e-55 | -8.615850e-47 |
| Msa0168500 | Msa0476650 | 0.824126 | 9.554124e-54 | -8.615850e-47 |
| Msa0173690 | Msa0476650 | 0.823743 | 1.175405e-53 | -8.615850e-47 |
| Msa0174450 | Msa0476650 | 0.839259 | 1.763680e-57 | -8.615850e-47 |
| Msa0175750 | Msa0476650 | 0.806912 | 6.532593e-50 | -8.615850e-47 |
| Msa0178560 | Msa0476650 | 0.814912 | 1.210092e-51 | -8.615850e-47 |
| Msa0182190 | Msa0476650 | 0.830597 | 2.684487e-55 | -8.615850e-47 |
| Msa0182240 | Msa0476650 | 0.831415 | 1.691035e-55 | -8.615850e-47 |
| Msa0190570 | Msa0476650 | 0.801233 | 9.917843e-49 | -8.615850e-47 |
| Msa0200050 | Msa0476650 | 0.800429 | 1.447214e-48 | -8.615850e-47 |
| Msa0211150 | Msa0476650 | 0.820938 | 5.265076e-53 | -8.615850e-47 |
| Msa0214550 | Msa0476650 | 0.807076 | 6.029786e-50 | -8.615850e-47 |
| Msa0221000 | Msa0476650 | 0.818834 | 1.593720e-52 | -8.615850e-47 |
| Msa0225100 | Msa0476650 | 0.840440 | 8.686302e-58 | -8.615850e-47 |
| Msa0225680 | Msa0476650 | 0.808259 | 3.382106e-50 | -8.615850e-47 |
| Msa0225860 | Msa0476650 | 0.866049 | 3.788678e-65 | -8.615850e-47 |
| Msa0229230 | Msa0476650 | 0.804066 | 2.581823e-49 | -8.615850e-47 |
| Msa0369790 | Msa0476650 | 0.825497 | 4.538110e-54 | -8.615850e-47 |
| Msa0371030 | Msa0476650 | 0.809095 | 2.241585e-50 | -8.615850e-47 |
| Msa0378720 | Msa0476650 | 0.831056 | 2.072356e-55 | -8.615850e-47 |
| Msa0380620 | Msa0476650 | 0.817169 | 3.791169e-52 | -8.615850e-47 |
| Msa0380670 | Msa0476650 | 0.838083 | 3.550647e-57 | -8.615850e-47 |
| Msa0382390 | Msa0476650 | 0.921774 | 2.323859e-88 | -8.615850e-47 |
| Msa0386090 | Msa0476650 | 0.830609 | 2.666621e-55 | -8.615850e-47 |
| Msa0386850 | Msa0476650 | 0.807526 | 4.842921e-50 | -8.615850e-47 |
| Msa0403640 | Msa0476650 | 0.817177 | 3.775801e-52 | -8.615850e-47 |
| Msa0405130 | Msa0476650 | 0.809176 | 2.153355e-50 | -8.615850e-47 |
| Msa0428150 | Msa0476650 | 0.817696 | 2.884022e-52 | -8.615850e-47 |
| Msa0428370 | Msa0476650 | 0.801873 | 7.330482e-49 | -8.615850e-47 |
| Msa0430260 | Msa0476650 | 0.816707 | 4.813068e-52 | -8.615850e-47 |
| Msa0430300 | Msa0476650 | 0.851511 | 8.461680e-61 | -8.615850e-47 |
| Msa0432140 | Msa0476650 | 0.951545 | 1.628424e-109 | -8.615850e-47 |
| Msa0435210 | Msa0476650 | 0.801376 | 9.271267e-49 | -8.615850e-47 |
| Msa0436910 | Msa0476650 | 0.809796 | 1.584680e-50 | -8.615850e-47 |
| Msa0448180 | Msa0476650 | 0.803154 | 3.990619e-49 | -8.615850e-47 |
| Msa0462500 | Msa0476650 | 0.814223 | 1.718543e-51 | -8.615850e-47 |
| Msa0464000 | Msa0476650 | 0.824281 | 8.789079e-54 | -8.615850e-47 |
| Msa0464680 | Msa0476650 | 0.808598 | 2.863336e-50 | -8.615850e-47 |
| Msa0465410 | Msa0476650 | 0.813689 | 2.253428e-51 | -8.615850e-47 |
| Msa0467490 | Msa0476650 | 0.826597 | 2.485776e-54 | -8.615850e-47 |
| Msa0472950 | Msa0476650 | 0.824627 | 7.285623e-54 | -8.615850e-47 |
| Msa0474520 | Msa0476650 | 0.830815 | 2.373924e-55 | -8.615850e-47 |
| Msa0474730 | Msa0476650 | 0.831313 | 1.792116e-55 | -8.615850e-47 |
| Msa0476650 | Msa0509550 | 0.822167 | 2.737596e-53 | -8.615850e-47 |
| Msa0476650 | Msa0511270 | 0.812150 | 4.899140e-51 | -8.615850e-47 |
| Msa0476650 | Msa0519750 | 0.805595 | 1.237287e-49 | -8.615850e-47 |
| Msa0476650 | Msa0519830 | 0.819519 | 1.112798e-52 | -8.615850e-47 |
| Msa0476650 | Msa0520990 | 0.953026 | 6.765747e-111 | -8.615850e-47 |
| Msa0476650 | Msa0528570 | 0.815511 | 8.906382e-52 | -8.615850e-47 |
| Msa0476650 | Msa0529030 | 0.809725 | 1.641905e-50 | -8.615850e-47 |
| Msa0476650 | Msa0530780 | 0.838570 | 2.659467e-57 | -8.615850e-47 |
| Msa0476650 | Msa0532070 | 0.820720 | 5.908276e-53 | -8.615850e-47 |
| Msa0476650 | Msa0534720 | 0.809080 | 2.258486e-50 | -8.615850e-47 |
| Msa0476650 | Msa0547900 | 0.824407 | 8.208558e-54 | -8.615850e-47 |
| Msa0476650 | Msa0548470 | 0.832400 | 9.657647e-56 | -8.615850e-47 |
| Msa0476650 | Msa0557460 | 0.807929 | 3.976262e-50 | -8.615850e-47 |
| Msa0476650 | Msa0567170 | 0.803544 | 3.314638e-49 | -8.615850e-47 |
| Msa0476650 | Msa0569200 | 0.815865 | 7.426519e-52 | -8.615850e-47 |
| Msa0476650 | Msa0571290 | 0.819204 | 1.313181e-52 | -8.615850e-47 |
| Msa0476650 | Msa0580370 | 0.847306 | 1.256941e-59 | -8.615850e-47 |
| Msa0476650 | Msa0581470 | 0.808643 | 2.799542e-50 | -8.615850e-47 |
| Msa0476650 | Msa0583360 | -0.838973 | 2.091676e-57 | -8.615850e-47 |
| Msa0476650 | Msa0587620 | 0.810885 | 9.226856e-51 | -8.615850e-47 |
| Msa0476650 | Msa0597790 | 0.827597 | 1.432591e-54 | -8.615850e-47 |
| Msa0476650 | Msa0602880 | 0.816844 | 4.485221e-52 | -8.615850e-47 |
| Msa0476650 | Msa0611210 | 0.810214 | 1.288325e-50 | -8.615850e-47 |
| Msa0476650 | Msa0624900 | 0.837262 | 5.765516e-57 | -8.615850e-47 |
| Msa0476650 | Msa0626450 | 0.857558 | 1.503701e-62 | -8.615850e-47 |
| Msa0476650 | Msa0626490 | 0.855436 | 6.316722e-62 | -8.615850e-47 |
| Msa0476650 | Msa0643940 | 0.804319 | 2.287056e-49 | -8.615850e-47 |
| Msa0476650 | Msa0644410 | 0.831246 | 1.860917e-55 | -8.615850e-47 |
| Msa0476650 | Msa0651550 | 0.806443 | 8.207631e-50 | -8.615850e-47 |
| Msa0476650 | Msa0658640 | 0.814262 | 1.685401e-51 | -8.615850e-47 |
| Msa0476650 | Msa0658880 | 0.806993 | 6.280103e-50 | -8.615850e-47 |
| Msa0476650 | Msa0661650 | 0.805633 | 1.214925e-49 | -8.615850e-47 |
| Msa0476650 | Msa0664150 | 0.824219 | 9.089534e-54 | -8.615850e-47 |
| Msa0476650 | Msa0664600 | 0.860611 | 1.830168e-63 | -8.615850e-47 |
| Msa0476650 | Msa0670100 | 0.840690 | 7.471612e-58 | -8.615850e-47 |
| Msa0476650 | Msa0677410 | 0.811823 | 5.774277e-51 | -8.615850e-47 |
| Msa0476650 | Msa0704410 | 0.808279 | 3.348123e-50 | -8.615850e-47 |
| Msa0476650 | Msa0721080 | 0.815275 | 1.005035e-51 | -8.615850e-47 |
| Msa0476650 | Msa0725050 | 0.804927 | 1.707413e-49 | -8.615850e-47 |
| Msa0476650 | Msa0728930 | 0.804926 | 1.708172e-49 | -8.615850e-47 |
| Msa0476650 | Msa0730430 | 0.809424 | 1.905167e-50 | -8.615850e-47 |
| Msa0476650 | Msa0733390 | 0.802028 | 6.813607e-49 | -8.615850e-47 |
| Msa0476650 | Msa0735780 | 0.802524 | 5.385277e-49 | -8.615850e-47 |
| Msa0476650 | Msa0741220 | 0.852607 | 4.131409e-61 | -8.615850e-47 |
| Msa0476650 | Msa0741240 | 0.807947 | 3.940138e-50 | -8.615850e-47 |
| Msa0476650 | Msa0741650 | 0.804018 | 2.641799e-49 | -8.615850e-47 |
| Msa0476650 | Msa0756490 | 0.843174 | 1.648342e-58 | -8.615850e-47 |
| Msa0476650 | Msa0761670 | 0.818322 | 2.082012e-52 | -8.615850e-47 |
| Msa0476650 | Msa0765840 | 0.805141 | 1.540391e-49 | -8.615850e-47 |
| Msa0476650 | Msa0768990 | 0.804707 | 1.898169e-49 | -8.615850e-47 |
| Msa0476650 | Msa0769180 | 0.802363 | 5.813696e-49 | -8.615850e-47 |
| Msa0476650 | Msa0792370 | 0.827299 | 1.689378e-54 | -8.615850e-47 |
| Msa0476650 | Msa0795870 | 0.854164 | 1.476849e-61 | -8.615850e-47 |
| Msa0476650 | Msa0816910 | 0.832779 | 7.781405e-56 | -8.615850e-47 |
| Msa0476650 | Msa0824450 | 0.825455 | 4.645294e-54 | -8.615850e-47 |
| Msa0476650 | Msa0829300 | 0.807765 | 4.306898e-50 | -8.615850e-47 |
| Msa0476650 | Msa0829330 | 0.824680 | 7.078682e-54 | -8.615850e-47 |
| Msa0476650 | Msa0833650 | 0.846835 | 1.691727e-59 | -8.615850e-47 |
| Msa0476650 | Msa0835490 | 0.859280 | 4.614580e-63 | -8.615850e-47 |
| Msa0476650 | Msa0861600 | 0.808141 | 3.583009e-50 | -8.615850e-47 |
| Msa0476650 | Msa0861850 | 0.806699 | 7.247172e-50 | -8.615850e-47 |
| Msa0476650 | Msa0861870 | 0.811206 | 7.861289e-51 | -8.615850e-47 |
| Msa0476650 | Msa0875290 | 0.807769 | 4.299290e-50 | -8.615850e-47 |
| Msa0476650 | Msa0876190 | 0.803090 | 4.115636e-49 | -8.615850e-47 |
| Msa0476650 | Msa0876310 | 0.805869 | 1.083964e-49 | -8.615850e-47 |
| Msa0476650 | Msa0876930 | 0.836065 | 1.164122e-56 | -8.615850e-47 |
| Msa0476650 | Msa0876940 | 0.818169 | 2.255174e-52 | -8.615850e-47 |
| Msa0476650 | Msa0892120 | 0.801225 | 9.953901e-49 | -8.615850e-47 |
| Msa0476650 | Msa0902510 | 0.807322 | 5.350121e-50 | -8.615850e-47 |
| Msa0476650 | Msa0903070 | 0.824843 | 6.478253e-54 | -8.615850e-47 |
| Msa0476650 | Msa0915520 | 0.802816 | 4.687353e-49 | -8.615850e-47 |
| Msa0476650 | Msa0919770 | 0.810441 | 1.150707e-50 | -8.615850e-47 |
| Msa0476650 | Msa0935470 | 0.815854 | 7.468569e-52 | -8.615850e-47 |
| Msa0476650 | Msa0945110 | 0.867949 | 9.380084e-66 | -8.615850e-47 |
| Msa0476650 | Msa0967870 | 0.834383 | 3.094012e-56 | -8.615850e-47 |
| Msa0476650 | Msa0969200 | 0.812793 | 3.545381e-51 | -8.615850e-47 |
| Msa0476650 | Msa0979180 | 0.811842 | 5.719343e-51 | -8.615850e-47 |
| Msa0476650 | Msa1000920 | 0.816744 | 4.722012e-52 | -8.615850e-47 |
| Msa0476650 | Msa1004800 | 0.821418 | 4.079963e-53 | -8.615850e-47 |
| Msa0476650 | Msa1019150 | 0.809925 | 1.486634e-50 | -8.615850e-47 |
| Msa0476650 | Msa1019430 | 0.817271 | 3.594911e-52 | -8.615850e-47 |
| Msa0476650 | Msa1019470 | 0.807217 | 5.630937e-50 | -8.615850e-47 |
| Msa0476650 | Msa1020480 | 0.804683 | 1.920595e-49 | -8.615850e-47 |
| Msa0476650 | Msa1020510 | 0.803895 | 2.801590e-49 | -8.615850e-47 |
| Msa0476650 | Msa1020670 | 0.810714 | 1.004571e-50 | -8.615850e-47 |
| Msa0476650 | Msa1021590 | 0.802220 | 6.221002e-49 | -8.615850e-47 |
| Msa0476650 | Msa1042160 | 0.823926 | 1.064580e-53 | -8.615850e-47 |
| Msa0476650 | Msa1042190 | 0.821163 | 4.672560e-53 | -8.615850e-47 |
| Msa0476650 | Msa1044470 | 0.811081 | 8.367017e-51 | -8.615850e-47 |
| Msa0476650 | Msa1044680 | 0.847899 | 8.633685e-60 | -8.615850e-47 |
| Msa0476650 | Msa1045140 | 0.848497 | 5.902706e-60 | -8.615850e-47 |
| Msa0476650 | Msa1074370 | 0.805432 | 1.338914e-49 | -8.615850e-47 |
| Msa0476650 | Msa1081390 | 0.835561 | 1.562173e-56 | -8.615850e-47 |
| Msa0476650 | Msa1084960 | 0.805189 | 1.505124e-49 | -8.615850e-47 |
| Msa0476650 | Msa1096960 | 0.820852 | 5.510840e-53 | -8.615850e-47 |
| Msa0476650 | Msa1100050 | 0.808330 | 3.266544e-50 | -8.615850e-47 |
| Msa0476650 | Msa1101090 | 0.811183 | 7.953230e-51 | -8.615850e-47 |
| Msa0476650 | Msa1102220 | 0.807943 | 3.949257e-50 | -8.615850e-47 |
| Msa0476650 | Msa1103990 | 0.850511 | 1.620209e-60 | -8.615850e-47 |
| Msa0476650 | Msa1105640 | 0.822254 | 2.613776e-53 | -8.615850e-47 |
| Msa0476650 | Msa1113340 | 0.834801 | 2.429805e-56 | -8.615850e-47 |
| Msa0476650 | Msa1116220 | 0.831016 | 2.119007e-55 | -8.615850e-47 |
| Msa0476650 | Msa1130230 | 0.804110 | 2.527978e-49 | -8.615850e-47 |
| Msa0476650 | Msa1132840 | 0.851082 | 1.118451e-60 | -8.615850e-47 |
| Msa0476650 | Msa1140210 | 0.812518 | 4.072530e-51 | -8.615850e-47 |
| Msa0476650 | Msa1145810 | 0.804528 | 2.069106e-49 | -8.615850e-47 |
| Msa0476650 | Msa1147740 | 0.809921 | 1.490185e-50 | -8.615850e-47 |
| Msa0476650 | Msa1155170 | -0.864847 | 9.055341e-65 | -8.615850e-47 |
| Msa0476650 | Msa1160920 | 0.804800 | 1.815276e-49 | -8.615850e-47 |
| Msa0476650 | Msa1162590 | 0.802641 | 5.094869e-49 | -8.615850e-47 |
| Msa0476650 | Msa1167470 | 0.807295 | 5.418979e-50 | -8.615850e-47 |
| Msa0476650 | Msa1186020 | 0.838786 | 2.338511e-57 | -8.615850e-47 |
| Msa0476650 | Msa1190920 | 0.828130 | 1.066484e-54 | -8.615850e-47 |
| Msa0476650 | Msa1199570 | 0.806836 | 6.779268e-50 | -8.615850e-47 |
| Msa0476650 | Msa1200890 | 0.805276 | 1.443617e-49 | -8.615850e-47 |
| Msa0476650 | Msa1206460 | 0.837990 | 3.750304e-57 | -8.615850e-47 |
| Msa0476650 | Msa1208950 | 0.830346 | 3.092157e-55 | -8.615850e-47 |
| Msa0476650 | Msa1209460 | 0.801177 | 1.018433e-48 | -8.615850e-47 |
| Msa0476650 | Msa1211230 | -0.810289 | 1.241474e-50 | -8.615850e-47 |
| Msa0476650 | Msa1217210 | 0.800747 | 1.246660e-48 | -8.615850e-47 |
| Msa0476650 | Msa1223470 | 0.801467 | 8.881463e-49 | -8.615850e-47 |
| Msa0476650 | Msa1224930 | 0.828348 | 9.452001e-55 | -8.615850e-47 |
| Msa0476650 | Msa1225700 | 0.804365 | 2.237647e-49 | -8.615850e-47 |
| Msa0476650 | Msa1225860 | -0.842293 | 2.825243e-58 | -8.615850e-47 |
| Msa0476650 | Msa1226520 | 0.815088 | 1.105753e-51 | -8.615850e-47 |
| Msa0476650 | Msa1236410 | 0.807402 | 5.145480e-50 | -8.615850e-47 |
| Msa0476650 | Msa1240770 | 0.803359 | 3.619722e-49 | -8.615850e-47 |
| Msa0476650 | Msa1243490 | 0.800567 | 1.356848e-48 | -8.615850e-47 |
| Msa0476650 | Msa1244500 | 0.803932 | 2.752701e-49 | -8.615850e-47 |
| Msa0476650 | Msa1265650 | 0.810145 | 1.333023e-50 | -8.615850e-47 |
| Msa0476650 | Msa1269480 | 0.820250 | 7.575914e-53 | -8.615850e-47 |
| Msa0476650 | Msa1277150 | 0.824456 | 7.992134e-54 | -8.615850e-47 |
| Msa0476650 | Msa1282260 | 0.822562 | 2.217114e-53 | -8.615850e-47 |
| Msa0476650 | Msa1285550 | 0.818222 | 2.194382e-52 | -8.615850e-47 |
| Msa0476650 | Msa1297230 | 0.825713 | 4.034912e-54 | -8.615850e-47 |
| Msa0476650 | Msa1298220 | 0.831548 | 1.568633e-55 | -8.615850e-47 |
| Msa0476650 | Msa1299400 | -0.808474 | 3.043214e-50 | -8.615850e-47 |
| Msa0476650 | Msa1302830 | 0.834163 | 3.512921e-56 | -8.615850e-47 |
| Msa0476650 | Msa1303650 | 0.802257 | 6.112721e-49 | -8.615850e-47 |
| Msa0476650 | Msa1321340 | 0.833393 | 5.472850e-56 | -8.615850e-47 |
| Msa0476650 | Msa1328710 | 0.809291 | 2.034950e-50 | -8.615850e-47 |
| Msa0476650 | Msa1331050 | -0.801850 | 7.410942e-49 | -8.615850e-47 |
| Msa0476650 | Msa1332070 | 0.810243 | 1.269865e-50 | -8.615850e-47 |
| Msa0476650 | Msa1333080 | 0.829587 | 4.734905e-55 | -8.615850e-47 |
| Msa0476650 | Msa1343170 | 0.803789 | 2.947409e-49 | -8.615850e-47 |
| Msa0476650 | Msa1343180 | 0.807165 | 5.773734e-50 | -8.615850e-47 |
| Msa0476650 | Msa1343430 | 0.833795 | 4.344212e-56 | -8.615850e-47 |
| Msa0476650 | Msa1348090 | 0.810703 | 1.010052e-50 | -8.615850e-47 |
| Msa0476650 | Msa1360440 | 0.807540 | 4.808070e-50 | -8.615850e-47 |
| Msa0476650 | Msa1369550 | 0.802471 | 5.522307e-49 | -8.615850e-47 |
| Msa0476650 | Msa1372040 | 0.816049 | 6.757583e-52 | -8.615850e-47 |
| Msa0476650 | Msa1372230 | 0.812100 | 5.023465e-51 | -8.615850e-47 |
| Msa0476650 | Msa1390440 | 0.840379 | 9.007714e-58 | -8.615850e-47 |
| Msa0476650 | Msa1392240 | 0.810093 | 1.368336e-50 | -8.615850e-47 |
| Msa0476650 | Msa1396030 | 0.806313 | 8.738609e-50 | -8.615850e-47 |
| Msa0476650 | Msa1397400 | 0.831946 | 1.250910e-55 | -8.615850e-47 |
| Msa0476650 | Msa1405460 | 0.806066 | 9.853808e-50 | -8.615850e-47 |
| Msa0476650 | Msa1414640 | 0.804258 | 2.354459e-49 | -8.615850e-47 |
| Msa0476650 | Msa1415540 | 0.804365 | 2.237647e-49 | -8.615850e-47 |
| Msa0476650 | Msa1422420 | 0.807507 | 4.886015e-50 | -8.615850e-47 |
| Msa0476650 | Msa1427100 | 0.819061 | 1.415593e-52 | -8.615850e-47 |
| Msa0476650 | Msa1427200 | 0.800186 | 1.622257e-48 | -8.615850e-47 |
| Msa0476650 | Msa1440560 | 0.821822 | 3.291224e-53 | -8.615850e-47 |
| Msa0476650 | Msa1440630 | 0.810619 | 1.053659e-50 | -8.615850e-47 |
| Msa0476650 | Msa1440960 | 0.846951 | 1.572829e-59 | -8.615850e-47 |
| Msa0476650 | Msa1446810 | 0.825682 | 4.103531e-54 | -8.615850e-47 |
| Msa0476650 | Msa1451160 | 0.807110 | 5.930868e-50 | -8.615850e-47 |
| Msa0476650 | Msa1454140 | 0.823013 | 1.740459e-53 | -8.615850e-47 |
| Msa0476650 | Msa1464810 | 0.800114 | 1.677712e-48 | -8.615850e-47 |
| Msa0242590 | Msa0476650 | 0.836887 | 7.188128e-57 | -8.615850e-47 |
| Msa0244640 | Msa0476650 | 0.838105 | 3.503914e-57 | -8.615850e-47 |
| Msa0255090 | Msa0476650 | 0.839229 | 1.795847e-57 | -8.615850e-47 |
| Msa0259380 | Msa0476650 | 0.838632 | 2.562273e-57 | -8.615850e-47 |
| Msa0260510 | Msa0476650 | 0.817062 | 4.006523e-52 | -8.615850e-47 |
| Msa0261340 | Msa0476650 | 0.800216 | 1.599481e-48 | -8.615850e-47 |
| Msa0266180 | Msa0476650 | 0.818469 | 1.928960e-52 | -8.615850e-47 |
| Msa0267110 | Msa0476650 | 0.867140 | 1.704162e-65 | -8.615850e-47 |
| Msa0270340 | Msa0476650 | 0.807139 | 5.847473e-50 | -8.615850e-47 |
| Msa0280790 | Msa0476650 | 0.806793 | 6.923806e-50 | -8.615850e-47 |
| Msa0283330 | Msa0476650 | 0.804820 | 1.798069e-49 | -8.615850e-47 |
| Msa0287740 | Msa0476650 | 0.833825 | 4.268846e-56 | -8.615850e-47 |
| Msa0290720 | Msa0476650 | 0.830700 | 2.533203e-55 | -8.615850e-47 |
| Msa0292400 | Msa0476650 | 0.830985 | 2.157326e-55 | -8.615850e-47 |
| Msa0298470 | Msa0476650 | 0.849686 | 2.758127e-60 | -8.615850e-47 |
| Msa0300240 | Msa0476650 | 0.818384 | 2.015672e-52 | -8.615850e-47 |
| Msa0307270 | Msa0476650 | 0.800801 | 1.215635e-48 | -8.615850e-47 |
| Msa0307670 | Msa0476650 | 0.818642 | 1.761720e-52 | -8.615850e-47 |
| Msa0312700 | Msa0476650 | 0.800104 | 1.685170e-48 | -8.615850e-47 |
| Msa0318700 | Msa0476650 | 0.801655 | 8.125481e-49 | -8.615850e-47 |
| Msa0321620 | Msa0476650 | 0.803190 | 3.922789e-49 | -8.615850e-47 |
| Msa0330380 | Msa0476650 | 0.804423 | 2.175663e-49 | -8.615850e-47 |
| Msa0337700 | Msa0476650 | 0.831663 | 1.468898e-55 | -8.615850e-47 |
| Msa0339500 | Msa0476650 | 0.824843 | 6.478242e-54 | -8.615850e-47 |
| Msa0340500 | Msa0476650 | 0.812791 | 3.548550e-51 | -8.615850e-47 |
| Msa0342310 | Msa0476650 | 0.806593 | 7.628490e-50 | -8.615850e-47 |
| Msa0361910 | Msa0476650 | 0.801969 | 7.004629e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476650 | MtrunA17_Chr3g0137061 | 88.202 | 356 | 41 | 1 | 59 | 414 | 141 | 495 | 0.0 | 582 |
| Msa0476650 | MtrunA17_Chr3g0137061 | 50.190 | 263 | 111 | 7 | 1 | 256 | 1 | 250 | 1.38e-57 | 196 |
| Msa0476650 | MtrunA17_Chr1g0149941 | 73.193 | 332 | 81 | 4 | 85 | 414 | 235 | 560 | 6.77e-144 | 421 |
| Msa0476650 | MtrunA17_Chr2g0283691 | 33.013 | 312 | 178 | 6 | 103 | 414 | 160 | 440 | 5.58e-33 | 129 |
| Msa0476650 | MtrunA17_Chr5g0435041 | 31.050 | 219 | 136 | 5 | 100 | 313 | 89 | 297 | 3.47e-22 | 97.4 |
| Msa0476650 | MtrunA17_Chr8g0377151 | 31.050 | 219 | 136 | 5 | 99 | 313 | 502 | 709 | 2.59e-21 | 96.7 |
| Msa0476650 | MtrunA17_Chr3g0111451 | 28.231 | 294 | 178 | 7 | 100 | 388 | 110 | 375 | 1.47e-18 | 87.0 |
| Msa0476650 | MtrunA17_Chr5g0429231 | 33.641 | 217 | 127 | 5 | 103 | 313 | 108 | 313 | 7.79e-18 | 84.3 |
| Msa0476650 | MtrunA17_Chr3g0122721 | 30.594 | 219 | 136 | 6 | 99 | 313 | 501 | 707 | 8.68e-18 | 85.9 |
| Msa0476650 | MtrunA17_Chr4g0031431 | 31.455 | 213 | 127 | 7 | 103 | 310 | 426 | 624 | 9.22e-17 | 82.4 |
| Msa0476650 | MtrunA17_Chr4g0044411 | 28.228 | 333 | 196 | 11 | 6 | 313 | 333 | 647 | 1.67e-16 | 81.6 |
| Msa0476650 | MtrunA17_Chr7g0237931 | 30.093 | 216 | 138 | 5 | 95 | 310 | 401 | 603 | 5.40e-16 | 80.1 |
| Msa0476650 | MtrunA17_Chr7g0261371 | 27.778 | 234 | 153 | 7 | 94 | 323 | 575 | 796 | 1.06e-13 | 73.2 |
| Msa0476650 | MtrunA17_Chr3g0106931 | 30.275 | 218 | 135 | 7 | 99 | 313 | 623 | 826 | 7.25e-13 | 70.5 |
| Msa0476650 | MtrunA17_Chr1g0183781 | 27.830 | 212 | 141 | 5 | 103 | 313 | 513 | 713 | 8.02e-13 | 70.5 |
| Msa0476650 | MtrunA17_Chr7g0248251 | 28.704 | 216 | 141 | 5 | 100 | 313 | 437 | 641 | 7.01e-12 | 67.4 |
| Msa0476650 | MtrunA17_Chr3g0134761 | 31.019 | 216 | 133 | 8 | 99 | 309 | 79 | 283 | 2.64e-11 | 64.7 |
| Msa0476650 | MtrunA17_Chr6g0449461 | 31.050 | 219 | 133 | 7 | 103 | 313 | 73 | 281 | 8.08e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0476650 | AT4G31890.3 | 68.373 | 332 | 83 | 8 | 85 | 414 | 207 | 518 | 1.93e-138 | 406 |
| Msa0476650 | AT4G31890.2 | 68.373 | 332 | 83 | 8 | 85 | 414 | 207 | 518 | 1.93e-138 | 406 |
| Msa0476650 | AT4G31890.1 | 68.373 | 332 | 83 | 8 | 85 | 414 | 207 | 518 | 1.93e-138 | 406 |
| Msa0476650 | AT2G25130.1 | 62.538 | 331 | 87 | 8 | 85 | 414 | 174 | 468 | 6.12e-123 | 365 |
| Msa0476650 | AT2G27430.1 | 33.016 | 315 | 179 | 8 | 103 | 414 | 153 | 438 | 8.08e-34 | 131 |
| Msa0476650 | AT1G67530.2 | 30.222 | 225 | 141 | 5 | 99 | 319 | 500 | 712 | 3.89e-21 | 96.3 |
| Msa0476650 | AT1G67530.1 | 30.222 | 225 | 141 | 5 | 99 | 319 | 500 | 712 | 3.89e-21 | 96.3 |
| Msa0476650 | AT1G67530.4 | 30.222 | 225 | 141 | 5 | 99 | 319 | 500 | 712 | 3.89e-21 | 96.3 |
| Msa0476650 | AT1G24330.1 | 29.876 | 241 | 156 | 5 | 99 | 337 | 500 | 729 | 9.54e-20 | 92.0 |
| Msa0476650 | AT1G24330.2 | 29.876 | 241 | 156 | 5 | 99 | 337 | 500 | 729 | 9.54e-20 | 92.0 |
| Msa0476650 | AT2G28830.1 | 32.627 | 236 | 135 | 10 | 95 | 322 | 353 | 572 | 7.65e-18 | 86.3 |
| Msa0476650 | AT3G03440.1 | 26.014 | 296 | 185 | 7 | 100 | 389 | 136 | 403 | 1.23e-17 | 84.7 |
| Msa0476650 | AT3G46510.1 | 31.222 | 221 | 131 | 8 | 95 | 310 | 421 | 625 | 1.74e-16 | 82.0 |
| Msa0476650 | AT1G27910.1 | 27.826 | 230 | 136 | 6 | 133 | 342 | 527 | 746 | 1.34e-15 | 79.3 |
| Msa0476650 | AT5G65200.1 | 28.017 | 232 | 149 | 5 | 91 | 313 | 287 | 509 | 1.54e-14 | 75.9 |
| Msa0476650 | AT5G62560.1 | 27.897 | 233 | 153 | 5 | 87 | 313 | 290 | 513 | 8.52e-14 | 73.6 |
| Msa0476650 | AT5G67340.1 | 28.241 | 216 | 143 | 6 | 99 | 313 | 493 | 697 | 1.41e-12 | 70.1 |
| Msa0476650 | AT5G67340.2 | 28.241 | 216 | 143 | 6 | 99 | 313 | 493 | 697 | 1.41e-12 | 70.1 |
| Msa0476650 | AT4G12710.1 | 27.778 | 216 | 142 | 4 | 103 | 313 | 124 | 330 | 3.40e-12 | 68.2 |
| Msa0476650 | AT1G23030.1 | 28.037 | 214 | 140 | 5 | 103 | 313 | 406 | 608 | 1.50e-11 | 66.6 |
Find 97 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGGATGCAATCACAATTT+TGG | 0.171187 | 3_3:-80477863 | Msa0476650:CDS |
| GATTCTAACAAACCAATAAT+TGG | 0.187713 | 3_3:-80478150 | Msa0476650:CDS |
| GATAAAGGGAAGCAGGTTTC+TGG | 0.201909 | 3_3:-80477640 | Msa0476650:CDS |
| GACGAATATTTCATTTGTTT+TGG | 0.222706 | 3_3:-80478007 | Msa0476650:CDS |
| GCACCAGAGGATCCAATTAT+TGG | 0.223709 | 3_3:+80478138 | None:intergenic |
| AAAGCAGCGATTGTTAAAAT+TGG | 0.251431 | 3_3:-80478273 | Msa0476650:CDS |
| GAAGCCTTCTCTTGACATTC+AGG | 0.257804 | 3_3:+80477814 | None:intergenic |
| CCTTTCAATTCTGAGCAATT+TGG | 0.260209 | 3_3:-80477923 | Msa0476650:CDS |
| TATATCGCGCAGGCTGTATT+AGG | 0.273715 | 3_3:+80476945 | None:intergenic |
| GCTTAACTACATTGGTCTTT+TGG | 0.284866 | 3_3:-80477278 | Msa0476650:three_prime_UTR |
| TCAACTGCAATTCGTCAAAA+TGG | 0.295980 | 3_3:+80477346 | None:intergenic |
| AGGAGGTAAAGAGTGTTTAA+TGG | 0.305362 | 3_3:-80477536 | Msa0476650:CDS |
| TGATTGTGACAGTGACATTA+AGG | 0.308355 | 3_3:+80476917 | None:intergenic |
| AAGTGCTGATTCAGTTTCTT+TGG | 0.320135 | 3_3:-80477130 | Msa0476650:three_prime_UTR |
| TCTAGTTTAAGTTTATCTTT+AGG | 0.323762 | 3_3:-80477179 | Msa0476650:three_prime_UTR |
| GGACAGAATTATAGCTGATA+TGG | 0.360205 | 3_3:-80476981 | Msa0476650:three_prime_UTR |
| AAAAGCTATTAGTGCTGTTA+AGG | 0.376170 | 3_3:-80477881 | Msa0476650:CDS |
| TTTCCTTGGATTAAGTGCTT+TGG | 0.382622 | 3_3:-80478172 | Msa0476650:CDS |
| AAGTTAAACAAGATGCTCTT+CGG | 0.386930 | 3_3:-80478056 | Msa0476650:CDS |
| GAAGACGAAGAAGCACAAAT+AGG | 0.399369 | 3_3:+80477577 | None:intergenic |
| AAAACCCTGCTGTTTATTAG+TGG | 0.399890 | 3_3:-80476873 | Msa0476650:three_prime_UTR |
| AGAGGCTCCGCCGCAGCTTA+AGG | 0.401079 | 3_3:+80478941 | None:intergenic |
| GCAATTGTTGCAAATTTCCT+TGG | 0.402106 | 3_3:-80478186 | Msa0476650:CDS |
| AGAGAAGACGGAGAAGCTAT+TGG | 0.413753 | 3_3:-80478829 | Msa0476650:CDS |
| CACATAAAGCTTATGCTGAT+AGG | 0.414828 | 3_3:-80477771 | Msa0476650:CDS |
| TACAATTCCTGCTTCAATCA+TGG | 0.419654 | 3_3:+80477744 | None:intergenic |
| TTGCTTGAGCTGACGCTTGT+GGG | 0.429303 | 3_3:-80477715 | Msa0476650:CDS |
| AGAAGTGATGGTGGAAACTT+AGG | 0.433937 | 3_3:-80477616 | Msa0476650:CDS |
| ATAAAGGGAAGCAGGTTTCT+GGG | 0.440773 | 3_3:-80477639 | Msa0476650:CDS |
| AGTTAAACAAGATGCTCTTC+GGG | 0.453105 | 3_3:-80478055 | Msa0476650:CDS |
| AATGATGCGGCGGAAGGATG+AGG | 0.454531 | 3_3:+80478971 | None:intergenic |
| CTTCTTCGCGGTGGTAATGT+CGG | 0.455884 | 3_3:+80478910 | None:intergenic |
| ACCTTGTGTTGTTGATTCAT+CGG | 0.459932 | 3_3:-80478217 | Msa0476650:CDS |
| AAACCAATAATTGGATCCTC+TGG | 0.464190 | 3_3:-80478141 | Msa0476650:CDS |
| TTCTCCGCGTAACTCCTTCA+CGG | 0.469664 | 3_3:+80478860 | None:intergenic |
| TAGTGCCTTGGCACAGAAAA+GGG | 0.470454 | 3_3:-80477692 | Msa0476650:CDS |
| TAAAGAGTGTTTAATGGAGG+AGG | 0.476887 | 3_3:-80477530 | Msa0476650:CDS |
| GGTGGTATGGCATGAACAAT+TGG | 0.478862 | 3_3:-80476852 | Msa0476650:three_prime_UTR |
| AAAACTTGGCAATGGAGGTA+TGG | 0.480124 | 3_3:+80477049 | None:intergenic |
| TAGGCTAGATAAAGGGAAGC+AGG | 0.493141 | 3_3:-80477647 | Msa0476650:CDS |
| CAGAGCTAATTTCTTCTTCG+CGG | 0.495177 | 3_3:+80478898 | None:intergenic |
| ATTGGATCTTCTGAACATAC+AGG | 0.495508 | 3_3:-80478811 | Msa0476650:intron |
| GACGCTTGTGGGTAGTGCCT+TGG | 0.497097 | 3_3:-80477704 | Msa0476650:CDS |
| TTTCAGAGTTCTAACTAGGA+AGG | 0.499120 | 3_3:+80478110 | None:intergenic |
| CAATTGAATCAACGTTGCTC+CGG | 0.501968 | 3_3:+80479051 | None:intergenic |
| GTAGTGCCTTGGCACAGAAA+AGG | 0.502811 | 3_3:-80477693 | Msa0476650:CDS |
| GCTGTTTATTAGTGGTGGTA+TGG | 0.512307 | 3_3:-80476865 | Msa0476650:three_prime_UTR |
| ATGATGCGGCGGAAGGATGA+GGG | 0.514556 | 3_3:+80478972 | None:intergenic |
| ATTGCTTGAGCTGACGCTTG+TGG | 0.515359 | 3_3:-80477716 | Msa0476650:CDS |
| TTTGATATTGCGATAAATTG+CGG | 0.526199 | 3_3:-80477002 | Msa0476650:three_prime_UTR |
| TACCACCACTAATAAACAGC+AGG | 0.526457 | 3_3:+80476868 | None:intergenic |
| TTCAGAGTTCTAACTAGGAA+GGG | 0.526621 | 3_3:+80478111 | None:intergenic |
| CGCAATATCAAAGATGTCCA+TGG | 0.532402 | 3_3:+80477013 | None:intergenic |
| TAATGTCACTGTCACAATCA+TGG | 0.533954 | 3_3:-80476914 | Msa0476650:three_prime_UTR |
| AGGTAAAGAGTGTTTAATGG+AGG | 0.535851 | 3_3:-80477533 | Msa0476650:CDS |
| AATTAGCTCTGTCGCGTCGA+CGG | 0.541624 | 3_3:-80478886 | Msa0476650:CDS |
| AGGCAAGCCATGATTGAAGC+AGG | 0.546829 | 3_3:-80477751 | Msa0476650:CDS |
| ACCCTGCTGTTTATTAGTGG+TGG | 0.548154 | 3_3:-80476870 | Msa0476650:three_prime_UTR |
| CAGGTTTCTGGGAGAAGTGA+TGG | 0.551186 | 3_3:-80477628 | Msa0476650:CDS |
| CCAATGTAGTTAAGCTGTTG+AGG | 0.557105 | 3_3:+80477286 | None:intergenic |
| CCTCAACAGCTTAACTACAT+TGG | 0.561197 | 3_3:-80477286 | Msa0476650:three_prime_UTR |
| GTCGAAAATGATGCGGCGGA+AGG | 0.563722 | 3_3:+80478965 | None:intergenic |
| AGAAGTGCGAGAAGAGAAGA+CGG | 0.565520 | 3_3:-80478841 | Msa0476650:CDS |
| GTGGTATGGCATGAACAATT+GGG | 0.567414 | 3_3:-80476851 | Msa0476650:three_prime_UTR |
| CCAAATTGCTCAGAATTGAA+AGG | 0.568365 | 3_3:+80477923 | None:intergenic |
| TGTTGATTCATCGGTTTCTG+AGG | 0.570602 | 3_3:-80478208 | Msa0476650:CDS |
| CATGATGAAAATTGTCAAGA+GGG | 0.572944 | 3_3:-80477443 | Msa0476650:CDS |
| CGCGTCGACGGCAACCGTGA+AGG | 0.579924 | 3_3:-80478874 | Msa0476650:CDS |
| TGGCACAGAAAAGGGCATCA+AGG | 0.580100 | 3_3:-80477684 | Msa0476650:CDS |
| CTGCAATTCGTCAAAATGGA+AGG | 0.580211 | 3_3:+80477350 | None:intergenic |
| TGATGCGGCGGAAGGATGAG+GGG | 0.580690 | 3_3:+80478973 | None:intergenic |
| GAGAAATGGCTAAGTGTCAC+CGG | 0.581139 | 3_3:-80479070 | None:intergenic |
| AGTGAAGCAAAACGCTCGGA+AGG | 0.587883 | 3_3:+80477397 | None:intergenic |
| AATCCAAAGCACTTAATCCA+AGG | 0.592090 | 3_3:+80478169 | None:intergenic |
| GATGCGGCGGAAGGATGAGG+GGG | 0.597640 | 3_3:+80478974 | None:intergenic |
| AGCTAATTTCTTCTTCGCGG+TGG | 0.599852 | 3_3:+80478901 | None:intergenic |
| AAAGAAACTGAATCAGCACT+TGG | 0.603952 | 3_3:+80477132 | None:intergenic |
| TTCACCTGAATGTCAAGAGA+AGG | 0.606603 | 3_3:-80477818 | Msa0476650:CDS |
| TTCGACGCCTTAAGCTGCGG+CGG | 0.610282 | 3_3:-80478948 | Msa0476650:CDS |
| AGTGAGTGAAGCAAAACGCT+CGG | 0.610988 | 3_3:+80477393 | None:intergenic |
| CAATTTGGTGTCGAGTCCCG+AGG | 0.611390 | 3_3:-80477908 | Msa0476650:CDS |
| ACATGATGAAAATTGTCAAG+AGG | 0.618956 | 3_3:-80477444 | Msa0476650:CDS |
| TTGCAGTTGATGGAGAGCAG+AGG | 0.640662 | 3_3:-80477333 | Msa0476650:three_prime_UTR |
| TAGGAAGGGTATTGCACCAG+AGG | 0.641343 | 3_3:+80478125 | None:intergenic |
| GTAATGTCGGTGGTGTCGAG+AGG | 0.644001 | 3_3:+80478923 | None:intergenic |
| CTTCGCGGTGGTAATGTCGG+TGG | 0.644496 | 3_3:+80478913 | None:intergenic |
| GATAAACTCGATAGAAGACA+TGG | 0.646492 | 3_3:-80477962 | Msa0476650:CDS |
| GTTTCTGGGAGAAGTGATGG+TGG | 0.653879 | 3_3:-80477625 | Msa0476650:CDS |
| ACCGATGAATCAACAACACA+AGG | 0.656484 | 3_3:+80478216 | None:intergenic |
| AATTTGGTGTCGAGTCCCGA+GGG | 0.656713 | 3_3:-80477907 | Msa0476650:CDS |
| TTTGTGAAGACAGATGGAGG+AGG | 0.662270 | 3_3:-80477553 | Msa0476650:CDS |
| ACCACCACTAATAAACAGCA+GGG | 0.679712 | 3_3:+80476869 | None:intergenic |
| AGGCGTCGAAAATGATGCGG+CGG | 0.698501 | 3_3:+80478961 | None:intergenic |
| TTAAGGCGTCGAAAATGATG+CGG | 0.708242 | 3_3:+80478958 | None:intergenic |
| GGAGAAGCGGAAGTTACCGG+CGG | 0.747289 | 3_3:+80478995 | None:intergenic |
| GCAACCGTGAAGGAGTTACG+CGG | 0.747970 | 3_3:-80478864 | Msa0476650:CDS |
| TGTCACTGTCACAATCATGG+TGG | 0.755714 | 3_3:-80476911 | Msa0476650:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATCATATTCTTAATTTTG+TGG | - | chr3_3:80477498-80477517 | Msa0476650:CDS | 15.0% |
| !!! | TTATCATATTCTTAATTTTG+TGG | - | chr3_3:80477498-80477517 | Msa0476650:CDS | 15.0% |
| !! | GAATATGATAAATTCATGAT+TGG | + | chr3_3:80477489-80477508 | None:intergenic | 20.0% |
| !! | GATTAAACACAAAAATTTCA+CGG | + | chr3_3:80477578-80477597 | None:intergenic | 20.0% |
| !!! | TTAATCTTTATTTGTTTCTG+TGG | - | chr3_3:80477592-80477611 | Msa0476650:CDS | 20.0% |
| !!! | TTCATACATTTTGATGATTA+TGG | - | chr3_3:80478109-80478128 | Msa0476650:CDS | 20.0% |
| !!! | TCTAGTTTAAGTTTATCTTT+AGG | - | chr3_3:80478724-80478743 | Msa0476650:intron | 20.0% |
| !!! | ATAGTGTCTATTATTTTTCA+TGG | + | chr3_3:80478819-80478838 | None:intergenic | 20.0% |
| !! | GAATATGATAAATTCATGAT+TGG | + | chr3_3:80477489-80477508 | None:intergenic | 20.0% |
| !! | GATTAAACACAAAAATTTCA+CGG | + | chr3_3:80477578-80477597 | None:intergenic | 20.0% |
| !!! | TTAATCTTTATTTGTTTCTG+TGG | - | chr3_3:80477592-80477611 | Msa0476650:CDS | 20.0% |
| !!! | TTCATACATTTTGATGATTA+TGG | - | chr3_3:80478109-80478128 | Msa0476650:CDS | 20.0% |
| !!! | TCTAGTTTAAGTTTATCTTT+AGG | - | chr3_3:80478724-80478743 | Msa0476650:intron | 20.0% |
| !!! | ATAGTGTCTATTATTTTTCA+TGG | + | chr3_3:80478819-80478838 | None:intergenic | 20.0% |
| ! | GATTCTAACAAACCAATAAT+TGG | - | chr3_3:80477753-80477772 | Msa0476650:CDS | 25.0% |
| !!! | AATTTTTCAGAGTTCTAACT+AGG | + | chr3_3:80477800-80477819 | None:intergenic | 25.0% |
| !! | GACGAATATTTCATTTGTTT+TGG | - | chr3_3:80477896-80477915 | Msa0476650:CDS | 25.0% |
| !!! | ATTTGTTTTGGAAACTGATA+TGG | - | chr3_3:80477908-80477927 | Msa0476650:CDS | 25.0% |
| !!! | TTTTGGTTGATGTATTGAAT+TGG | - | chr3_3:80478057-80478076 | Msa0476650:CDS | 25.0% |
| !!! | AATGTTTTAGGCTAGATAAA+GGG | - | chr3_3:80478249-80478268 | Msa0476650:CDS | 25.0% |
| !!! | TTTTGTTATCACTGATGTAA+TGG | - | chr3_3:80478659-80478678 | Msa0476650:intron | 25.0% |
| !!! | TTTAGGTTCTTTTGTTGTTT+TGG | - | chr3_3:80478741-80478760 | Msa0476650:intron | 25.0% |
| !!! | TTAGGTTCTTTTGTTGTTTT+GGG | - | chr3_3:80478742-80478761 | Msa0476650:intron | 25.0% |
| !!! | CTATTATTTTTCATGGTTGA+TGG | + | chr3_3:80478812-80478831 | None:intergenic | 25.0% |
| ! | TGATTTAAAAAACTTGGCAA+TGG | + | chr3_3:80478865-80478884 | None:intergenic | 25.0% |
| !!! | TTGCCAAGTTTTTTAAATCA+AGG | - | chr3_3:80478865-80478884 | Msa0476650:CDS | 25.0% |
| !!! | TGCCAAGTTTTTTAAATCAA+GGG | - | chr3_3:80478866-80478885 | Msa0476650:CDS | 25.0% |
| ! | TTTGATATTGCGATAAATTG+CGG | - | chr3_3:80478901-80478920 | Msa0476650:CDS | 25.0% |
| ! | GATTCTAACAAACCAATAAT+TGG | - | chr3_3:80477753-80477772 | Msa0476650:CDS | 25.0% |
| !!! | AATTTTTCAGAGTTCTAACT+AGG | + | chr3_3:80477800-80477819 | None:intergenic | 25.0% |
| !! | GACGAATATTTCATTTGTTT+TGG | - | chr3_3:80477896-80477915 | Msa0476650:CDS | 25.0% |
| !!! | ATTTGTTTTGGAAACTGATA+TGG | - | chr3_3:80477908-80477927 | Msa0476650:CDS | 25.0% |
| !!! | TTTTGGTTGATGTATTGAAT+TGG | - | chr3_3:80478057-80478076 | Msa0476650:CDS | 25.0% |
| !!! | AATGTTTTAGGCTAGATAAA+GGG | - | chr3_3:80478249-80478268 | Msa0476650:CDS | 25.0% |
| !!! | TTTTGTTATCACTGATGTAA+TGG | - | chr3_3:80478659-80478678 | Msa0476650:intron | 25.0% |
| !!! | TTTAGGTTCTTTTGTTGTTT+TGG | - | chr3_3:80478741-80478760 | Msa0476650:intron | 25.0% |
| !!! | TTAGGTTCTTTTGTTGTTTT+GGG | - | chr3_3:80478742-80478761 | Msa0476650:intron | 25.0% |
| !!! | CTATTATTTTTCATGGTTGA+TGG | + | chr3_3:80478812-80478831 | None:intergenic | 25.0% |
| ! | TGATTTAAAAAACTTGGCAA+TGG | + | chr3_3:80478865-80478884 | None:intergenic | 25.0% |
| !!! | TTGCCAAGTTTTTTAAATCA+AGG | - | chr3_3:80478865-80478884 | Msa0476650:CDS | 25.0% |
| !!! | TGCCAAGTTTTTTAAATCAA+GGG | - | chr3_3:80478866-80478885 | Msa0476650:CDS | 25.0% |
| ! | TTTGATATTGCGATAAATTG+CGG | - | chr3_3:80478901-80478920 | Msa0476650:CDS | 25.0% |
| CTATATGCTTTACTCAATCT+CGG | - | chr3_3:80477348-80477367 | Msa0476650:exon | 30.0% | |
| AAAGCAGCGATTGTTAAAAT+TGG | - | chr3_3:80477630-80477649 | Msa0476650:CDS | 30.0% | |
| AAGTTAAACAAGATGCTCTT+CGG | - | chr3_3:80477847-80477866 | Msa0476650:CDS | 30.0% | |
| ! | AAAAGCTATTAGTGCTGTTA+AGG | - | chr3_3:80478022-80478041 | Msa0476650:CDS | 30.0% |
| ! | TAAGGATGCAATCACAATTT+TGG | - | chr3_3:80478040-80478059 | Msa0476650:CDS | 30.0% |
| ! | CAAGGATATTGCAATGTTTT+AGG | - | chr3_3:80478237-80478256 | Msa0476650:CDS | 30.0% |
| !! | CAATGTTTTAGGCTAGATAA+AGG | - | chr3_3:80478248-80478267 | Msa0476650:CDS | 30.0% |
| ACATGATGAAAATTGTCAAG+AGG | - | chr3_3:80478459-80478478 | Msa0476650:intron | 30.0% | |
| CATGATGAAAATTGTCAAGA+GGG | - | chr3_3:80478460-80478479 | Msa0476650:intron | 30.0% | |
| TTTAAAAAACTTGGCAATGG+AGG | + | chr3_3:80478862-80478881 | None:intergenic | 30.0% | |
| GACCCTTGATTTAAAAAACT+TGG | + | chr3_3:80478871-80478890 | None:intergenic | 30.0% | |
| !!! | TTTTTTAAATCAAGGGTCCA+TGG | - | chr3_3:80478873-80478892 | Msa0476650:CDS | 30.0% |
| CTATATGCTTTACTCAATCT+CGG | - | chr3_3:80477348-80477367 | Msa0476650:exon | 30.0% | |
| AAAGCAGCGATTGTTAAAAT+TGG | - | chr3_3:80477630-80477649 | Msa0476650:CDS | 30.0% | |
| AAGTTAAACAAGATGCTCTT+CGG | - | chr3_3:80477847-80477866 | Msa0476650:CDS | 30.0% | |
| ! | AAAAGCTATTAGTGCTGTTA+AGG | - | chr3_3:80478022-80478041 | Msa0476650:CDS | 30.0% |
| ! | TAAGGATGCAATCACAATTT+TGG | - | chr3_3:80478040-80478059 | Msa0476650:CDS | 30.0% |
| ! | CAAGGATATTGCAATGTTTT+AGG | - | chr3_3:80478237-80478256 | Msa0476650:CDS | 30.0% |
| !! | CAATGTTTTAGGCTAGATAA+AGG | - | chr3_3:80478248-80478267 | Msa0476650:CDS | 30.0% |
| ACATGATGAAAATTGTCAAG+AGG | - | chr3_3:80478459-80478478 | Msa0476650:intron | 30.0% | |
| CATGATGAAAATTGTCAAGA+GGG | - | chr3_3:80478460-80478479 | Msa0476650:intron | 30.0% | |
| TTTAAAAAACTTGGCAATGG+AGG | + | chr3_3:80478862-80478881 | None:intergenic | 30.0% | |
| GACCCTTGATTTAAAAAACT+TGG | + | chr3_3:80478871-80478890 | None:intergenic | 30.0% | |
| !!! | TTTTTTAAATCAAGGGTCCA+TGG | - | chr3_3:80478873-80478892 | Msa0476650:CDS | 30.0% |
| ATTGGATCTTCTGAACATAC+AGG | - | chr3_3:80477092-80477111 | Msa0476650:three_prime_UTR | 35.0% | |
| ACAGGTTCATGAAACAAATG+CGG | - | chr3_3:80477110-80477129 | Msa0476650:three_prime_UTR | 35.0% | |
| GAAGAAGGAAGAGACATTAA+CGG | - | chr3_3:80477140-80477159 | Msa0476650:three_prime_UTR | 35.0% | |
| !! | ACCTTGTGTTGTTGATTCAT+CGG | - | chr3_3:80477686-80477705 | Msa0476650:CDS | 35.0% |
| GCAATTGTTGCAAATTTCCT+TGG | - | chr3_3:80477717-80477736 | Msa0476650:CDS | 35.0% | |
| TTTCCTTGGATTAAGTGCTT+TGG | - | chr3_3:80477731-80477750 | Msa0476650:CDS | 35.0% | |
| ! | AATCCAAAGCACTTAATCCA+AGG | + | chr3_3:80477737-80477756 | None:intergenic | 35.0% |
| AAACCAATAATTGGATCCTC+TGG | - | chr3_3:80477762-80477781 | Msa0476650:CDS | 35.0% | |
| ! | TTCAGAGTTCTAACTAGGAA+GGG | + | chr3_3:80477795-80477814 | None:intergenic | 35.0% |
| ! | TTTCAGAGTTCTAACTAGGA+AGG | + | chr3_3:80477796-80477815 | None:intergenic | 35.0% |
| AGTTAAACAAGATGCTCTTC+GGG | - | chr3_3:80477848-80477867 | Msa0476650:CDS | 35.0% | |
| GATAAACTCGATAGAAGACA+TGG | - | chr3_3:80477941-80477960 | Msa0476650:CDS | 35.0% | |
| CCAAATTGCTCAGAATTGAA+AGG | + | chr3_3:80477983-80478002 | None:intergenic | 35.0% | |
| CCTTTCAATTCTGAGCAATT+TGG | - | chr3_3:80477980-80477999 | Msa0476650:CDS | 35.0% | |
| ! | ACTAATAGCTTTTCTACCCT+CGG | + | chr3_3:80478015-80478034 | None:intergenic | 35.0% |
| CACATAAAGCTTATGCTGAT+AGG | - | chr3_3:80478132-80478151 | Msa0476650:CDS | 35.0% | |
| TACAATTCCTGCTTCAATCA+TGG | + | chr3_3:80478162-80478181 | None:intergenic | 35.0% | |
| ! | TCTTCTTTTGTGAAGACAGA+TGG | - | chr3_3:80478344-80478363 | Msa0476650:intron | 35.0% |
| !! | AGGAGGTAAAGAGTGTTTAA+TGG | - | chr3_3:80478367-80478386 | Msa0476650:intron | 35.0% |
| !! | AGGTAAAGAGTGTTTAATGG+AGG | - | chr3_3:80478370-80478389 | Msa0476650:intron | 35.0% |
| !! | TAAAGAGTGTTTAATGGAGG+AGG | - | chr3_3:80478373-80478392 | Msa0476650:intron | 35.0% |
| TCAACTGCAATTCGTCAAAA+TGG | + | chr3_3:80478560-80478579 | None:intergenic | 35.0% | |
| ! | TTTTGACGAATTGCAGTTGA+TGG | - | chr3_3:80478560-80478579 | Msa0476650:intron | 35.0% |
| !!! | GCTTAACTACATTGGTCTTT+TGG | - | chr3_3:80478625-80478644 | Msa0476650:intron | 35.0% |
| AAAGAAACTGAATCAGCACT+TGG | + | chr3_3:80478774-80478793 | None:intergenic | 35.0% | |
| !! | AAGTGCTGATTCAGTTTCTT+TGG | - | chr3_3:80478773-80478792 | Msa0476650:intron | 35.0% |
| GGACAGAATTATAGCTGATA+TGG | - | chr3_3:80478922-80478941 | Msa0476650:CDS | 35.0% | |
| !!! | TAAGGTTTTTTATATCGCGC+AGG | + | chr3_3:80478971-80478990 | None:intergenic | 35.0% |
| TGATTGTGACAGTGACATTA+AGG | + | chr3_3:80478989-80479008 | None:intergenic | 35.0% | |
| TAATGTCACTGTCACAATCA+TGG | - | chr3_3:80478989-80479008 | Msa0476650:CDS | 35.0% | |
| ! | AAAACCCTGCTGTTTATTAG+TGG | - | chr3_3:80479030-80479049 | Msa0476650:CDS | 35.0% |
| ATTGGATCTTCTGAACATAC+AGG | - | chr3_3:80477092-80477111 | Msa0476650:three_prime_UTR | 35.0% | |
| ACAGGTTCATGAAACAAATG+CGG | - | chr3_3:80477110-80477129 | Msa0476650:three_prime_UTR | 35.0% | |
| GAAGAAGGAAGAGACATTAA+CGG | - | chr3_3:80477140-80477159 | Msa0476650:three_prime_UTR | 35.0% | |
| !! | ACCTTGTGTTGTTGATTCAT+CGG | - | chr3_3:80477686-80477705 | Msa0476650:CDS | 35.0% |
| GCAATTGTTGCAAATTTCCT+TGG | - | chr3_3:80477717-80477736 | Msa0476650:CDS | 35.0% | |
| TTTCCTTGGATTAAGTGCTT+TGG | - | chr3_3:80477731-80477750 | Msa0476650:CDS | 35.0% | |
| ! | AATCCAAAGCACTTAATCCA+AGG | + | chr3_3:80477737-80477756 | None:intergenic | 35.0% |
| AAACCAATAATTGGATCCTC+TGG | - | chr3_3:80477762-80477781 | Msa0476650:CDS | 35.0% | |
| ! | TTCAGAGTTCTAACTAGGAA+GGG | + | chr3_3:80477795-80477814 | None:intergenic | 35.0% |
| ! | TTTCAGAGTTCTAACTAGGA+AGG | + | chr3_3:80477796-80477815 | None:intergenic | 35.0% |
| AGTTAAACAAGATGCTCTTC+GGG | - | chr3_3:80477848-80477867 | Msa0476650:CDS | 35.0% | |
| GATAAACTCGATAGAAGACA+TGG | - | chr3_3:80477941-80477960 | Msa0476650:CDS | 35.0% | |
| CCAAATTGCTCAGAATTGAA+AGG | + | chr3_3:80477983-80478002 | None:intergenic | 35.0% | |
| CCTTTCAATTCTGAGCAATT+TGG | - | chr3_3:80477980-80477999 | Msa0476650:CDS | 35.0% | |
| ! | ACTAATAGCTTTTCTACCCT+CGG | + | chr3_3:80478015-80478034 | None:intergenic | 35.0% |
| CACATAAAGCTTATGCTGAT+AGG | - | chr3_3:80478132-80478151 | Msa0476650:CDS | 35.0% | |
| TACAATTCCTGCTTCAATCA+TGG | + | chr3_3:80478162-80478181 | None:intergenic | 35.0% | |
| ! | TCTTCTTTTGTGAAGACAGA+TGG | - | chr3_3:80478344-80478363 | Msa0476650:intron | 35.0% |
| !! | AGGAGGTAAAGAGTGTTTAA+TGG | - | chr3_3:80478367-80478386 | Msa0476650:intron | 35.0% |
| !! | AGGTAAAGAGTGTTTAATGG+AGG | - | chr3_3:80478370-80478389 | Msa0476650:intron | 35.0% |
| !! | TAAAGAGTGTTTAATGGAGG+AGG | - | chr3_3:80478373-80478392 | Msa0476650:intron | 35.0% |
| TCAACTGCAATTCGTCAAAA+TGG | + | chr3_3:80478560-80478579 | None:intergenic | 35.0% | |
| ! | TTTTGACGAATTGCAGTTGA+TGG | - | chr3_3:80478560-80478579 | Msa0476650:intron | 35.0% |
| !!! | GCTTAACTACATTGGTCTTT+TGG | - | chr3_3:80478625-80478644 | Msa0476650:intron | 35.0% |
| AAAGAAACTGAATCAGCACT+TGG | + | chr3_3:80478774-80478793 | None:intergenic | 35.0% | |
| !! | AAGTGCTGATTCAGTTTCTT+TGG | - | chr3_3:80478773-80478792 | Msa0476650:intron | 35.0% |
| GGACAGAATTATAGCTGATA+TGG | - | chr3_3:80478922-80478941 | Msa0476650:CDS | 35.0% | |
| !!! | TAAGGTTTTTTATATCGCGC+AGG | + | chr3_3:80478971-80478990 | None:intergenic | 35.0% |
| TGATTGTGACAGTGACATTA+AGG | + | chr3_3:80478989-80479008 | None:intergenic | 35.0% | |
| TAATGTCACTGTCACAATCA+TGG | - | chr3_3:80478989-80479008 | Msa0476650:CDS | 35.0% | |
| ! | AAAACCCTGCTGTTTATTAG+TGG | - | chr3_3:80479030-80479049 | Msa0476650:CDS | 35.0% |
| CAATTGAATCAACGTTGCTC+CGG | + | chr3_3:80476855-80476874 | None:intergenic | 40.0% | |
| !! | TTAAGGCGTCGAAAATGATG+CGG | + | chr3_3:80476948-80476967 | None:intergenic | 40.0% |
| CAGAGCTAATTTCTTCTTCG+CGG | + | chr3_3:80477008-80477027 | None:intergenic | 40.0% | |
| AAATGCGGAATCGAAGAAGA+AGG | - | chr3_3:80477125-80477144 | Msa0476650:three_prime_UTR | 40.0% | |
| ATTAACGGAGATGAAGCATG+TGG | - | chr3_3:80477155-80477174 | Msa0476650:three_prime_UTR | 40.0% | |
| CATGTGGTTAAGGATTTACG+CGG | - | chr3_3:80477171-80477190 | Msa0476650:three_prime_UTR | 40.0% | |
| ACCGATGAATCAACAACACA+AGG | + | chr3_3:80477690-80477709 | None:intergenic | 40.0% | |
| !! | TGTTGATTCATCGGTTTCTG+AGG | - | chr3_3:80477695-80477714 | Msa0476650:CDS | 40.0% |
| ! | CTAATAGCTTTTCTACCCTC+GGG | + | chr3_3:80478014-80478033 | None:intergenic | 40.0% |
| TTCACCTGAATGTCAAGAGA+AGG | - | chr3_3:80478085-80478104 | Msa0476650:CDS | 40.0% | |
| ATAAAGGGAAGCAGGTTTCT+GGG | - | chr3_3:80478264-80478283 | Msa0476650:CDS | 40.0% | |
| !! | AGAAGTGATGGTGGAAACTT+AGG | - | chr3_3:80478287-80478306 | Msa0476650:intron | 40.0% |
| ! | GAAGACGAAGAAGCACAAAT+AGG | + | chr3_3:80478329-80478348 | None:intergenic | 40.0% |
| ! | TCTTTTGTGAAGACAGATGG+AGG | - | chr3_3:80478347-80478366 | Msa0476650:intron | 40.0% |
| CTGCAATTCGTCAAAATGGA+AGG | + | chr3_3:80478556-80478575 | None:intergenic | 40.0% | |
| CCAATGTAGTTAAGCTGTTG+AGG | + | chr3_3:80478620-80478639 | None:intergenic | 40.0% | |
| CCTCAACAGCTTAACTACAT+TGG | - | chr3_3:80478617-80478636 | Msa0476650:intron | 40.0% | |
| AAAACTTGGCAATGGAGGTA+TGG | + | chr3_3:80478857-80478876 | None:intergenic | 40.0% | |
| CGCAATATCAAAGATGTCCA+TGG | + | chr3_3:80478893-80478912 | None:intergenic | 40.0% | |
| ACCACCACTAATAAACAGCA+GGG | + | chr3_3:80479037-80479056 | None:intergenic | 40.0% | |
| TACCACCACTAATAAACAGC+AGG | + | chr3_3:80479038-80479057 | None:intergenic | 40.0% | |
| GCTGTTTATTAGTGGTGGTA+TGG | - | chr3_3:80479038-80479057 | Msa0476650:CDS | 40.0% | |
| GTGGTATGGCATGAACAATT+GGG | - | chr3_3:80479052-80479071 | Msa0476650:CDS | 40.0% | |
| CAATTGAATCAACGTTGCTC+CGG | + | chr3_3:80476855-80476874 | None:intergenic | 40.0% | |
| !! | TTAAGGCGTCGAAAATGATG+CGG | + | chr3_3:80476948-80476967 | None:intergenic | 40.0% |
| CAGAGCTAATTTCTTCTTCG+CGG | + | chr3_3:80477008-80477027 | None:intergenic | 40.0% | |
| AAATGCGGAATCGAAGAAGA+AGG | - | chr3_3:80477125-80477144 | Msa0476650:three_prime_UTR | 40.0% | |
| ATTAACGGAGATGAAGCATG+TGG | - | chr3_3:80477155-80477174 | Msa0476650:three_prime_UTR | 40.0% | |
| CATGTGGTTAAGGATTTACG+CGG | - | chr3_3:80477171-80477190 | Msa0476650:three_prime_UTR | 40.0% | |
| ACCGATGAATCAACAACACA+AGG | + | chr3_3:80477690-80477709 | None:intergenic | 40.0% | |
| !! | TGTTGATTCATCGGTTTCTG+AGG | - | chr3_3:80477695-80477714 | Msa0476650:CDS | 40.0% |
| ! | CTAATAGCTTTTCTACCCTC+GGG | + | chr3_3:80478014-80478033 | None:intergenic | 40.0% |
| TTCACCTGAATGTCAAGAGA+AGG | - | chr3_3:80478085-80478104 | Msa0476650:CDS | 40.0% | |
| ATAAAGGGAAGCAGGTTTCT+GGG | - | chr3_3:80478264-80478283 | Msa0476650:CDS | 40.0% | |
| !! | AGAAGTGATGGTGGAAACTT+AGG | - | chr3_3:80478287-80478306 | Msa0476650:intron | 40.0% |
| ! | GAAGACGAAGAAGCACAAAT+AGG | + | chr3_3:80478329-80478348 | None:intergenic | 40.0% |
| ! | TCTTTTGTGAAGACAGATGG+AGG | - | chr3_3:80478347-80478366 | Msa0476650:intron | 40.0% |
| CTGCAATTCGTCAAAATGGA+AGG | + | chr3_3:80478556-80478575 | None:intergenic | 40.0% | |
| CCAATGTAGTTAAGCTGTTG+AGG | + | chr3_3:80478620-80478639 | None:intergenic | 40.0% | |
| CCTCAACAGCTTAACTACAT+TGG | - | chr3_3:80478617-80478636 | Msa0476650:intron | 40.0% | |
| AAAACTTGGCAATGGAGGTA+TGG | + | chr3_3:80478857-80478876 | None:intergenic | 40.0% | |
| CGCAATATCAAAGATGTCCA+TGG | + | chr3_3:80478893-80478912 | None:intergenic | 40.0% | |
| ACCACCACTAATAAACAGCA+GGG | + | chr3_3:80479037-80479056 | None:intergenic | 40.0% | |
| TACCACCACTAATAAACAGC+AGG | + | chr3_3:80479038-80479057 | None:intergenic | 40.0% | |
| GCTGTTTATTAGTGGTGGTA+TGG | - | chr3_3:80479038-80479057 | Msa0476650:CDS | 40.0% | |
| GTGGTATGGCATGAACAATT+GGG | - | chr3_3:80479052-80479071 | Msa0476650:CDS | 40.0% | |
| ! | ATTTTCGACGCCTTAAGCTG+CGG | - | chr3_3:80476952-80476971 | Msa0476650:three_prime_UTR | 45.0% |
| AGCTAATTTCTTCTTCGCGG+TGG | + | chr3_3:80477005-80477024 | None:intergenic | 45.0% | |
| ! | AGAAGTGCGAGAAGAGAAGA+CGG | - | chr3_3:80477062-80477081 | Msa0476650:three_prime_UTR | 45.0% |
| AGAGAAGACGGAGAAGCTAT+TGG | - | chr3_3:80477074-80477093 | Msa0476650:three_prime_UTR | 45.0% | |
| GGAGATGAAGCATGTGGTTA+AGG | - | chr3_3:80477161-80477180 | Msa0476650:three_prime_UTR | 45.0% | |
| AAAGAAGATTCCGAAGCGAG+AGG | - | chr3_3:80477246-80477265 | Msa0476650:three_prime_UTR | 45.0% | |
| GAGAGAAACTTACGCATCGT+TGG | + | chr3_3:80477379-80477398 | None:intergenic | 45.0% | |
| GCACCAGAGGATCCAATTAT+TGG | + | chr3_3:80477768-80477787 | None:intergenic | 45.0% | |
| GAAGCCTTCTCTTGACATTC+AGG | + | chr3_3:80478092-80478111 | None:intergenic | 45.0% | |
| TAGTGCCTTGGCACAGAAAA+GGG | - | chr3_3:80478211-80478230 | Msa0476650:CDS | 45.0% | |
| TAGGCTAGATAAAGGGAAGC+AGG | - | chr3_3:80478256-80478275 | Msa0476650:CDS | 45.0% | |
| GATAAAGGGAAGCAGGTTTC+TGG | - | chr3_3:80478263-80478282 | Msa0476650:CDS | 45.0% | |
| TTTGTGAAGACAGATGGAGG+AGG | - | chr3_3:80478350-80478369 | Msa0476650:intron | 45.0% | |
| AGTGAGTGAAGCAAAACGCT+CGG | + | chr3_3:80478513-80478532 | None:intergenic | 45.0% | |
| TATATCGCGCAGGCTGTATT+AGG | + | chr3_3:80478961-80478980 | None:intergenic | 45.0% | |
| TGTCACTGTCACAATCATGG+TGG | - | chr3_3:80478992-80479011 | Msa0476650:CDS | 45.0% | |
| ! | ACCCTGCTGTTTATTAGTGG+TGG | - | chr3_3:80479033-80479052 | Msa0476650:CDS | 45.0% |
| GGTGGTATGGCATGAACAAT+TGG | - | chr3_3:80479051-80479070 | Msa0476650:CDS | 45.0% | |
| ! | ATTTTCGACGCCTTAAGCTG+CGG | - | chr3_3:80476952-80476971 | Msa0476650:three_prime_UTR | 45.0% |
| AGCTAATTTCTTCTTCGCGG+TGG | + | chr3_3:80477005-80477024 | None:intergenic | 45.0% | |
| ! | AGAAGTGCGAGAAGAGAAGA+CGG | - | chr3_3:80477062-80477081 | Msa0476650:three_prime_UTR | 45.0% |
| AGAGAAGACGGAGAAGCTAT+TGG | - | chr3_3:80477074-80477093 | Msa0476650:three_prime_UTR | 45.0% | |
| GGAGATGAAGCATGTGGTTA+AGG | - | chr3_3:80477161-80477180 | Msa0476650:three_prime_UTR | 45.0% | |
| AAAGAAGATTCCGAAGCGAG+AGG | - | chr3_3:80477246-80477265 | Msa0476650:three_prime_UTR | 45.0% | |
| GAGAGAAACTTACGCATCGT+TGG | + | chr3_3:80477379-80477398 | None:intergenic | 45.0% | |
| GCACCAGAGGATCCAATTAT+TGG | + | chr3_3:80477768-80477787 | None:intergenic | 45.0% | |
| GAAGCCTTCTCTTGACATTC+AGG | + | chr3_3:80478092-80478111 | None:intergenic | 45.0% | |
| TAGTGCCTTGGCACAGAAAA+GGG | - | chr3_3:80478211-80478230 | Msa0476650:CDS | 45.0% | |
| TAGGCTAGATAAAGGGAAGC+AGG | - | chr3_3:80478256-80478275 | Msa0476650:CDS | 45.0% | |
| GATAAAGGGAAGCAGGTTTC+TGG | - | chr3_3:80478263-80478282 | Msa0476650:CDS | 45.0% | |
| TTTGTGAAGACAGATGGAGG+AGG | - | chr3_3:80478350-80478369 | Msa0476650:intron | 45.0% | |
| AGTGAGTGAAGCAAAACGCT+CGG | + | chr3_3:80478513-80478532 | None:intergenic | 45.0% | |
| TATATCGCGCAGGCTGTATT+AGG | + | chr3_3:80478961-80478980 | None:intergenic | 45.0% | |
| TGTCACTGTCACAATCATGG+TGG | - | chr3_3:80478992-80479011 | Msa0476650:CDS | 45.0% | |
| ! | ACCCTGCTGTTTATTAGTGG+TGG | - | chr3_3:80479033-80479052 | Msa0476650:CDS | 45.0% |
| GGTGGTATGGCATGAACAAT+TGG | - | chr3_3:80479051-80479070 | Msa0476650:CDS | 45.0% | |
| ! | CGGTAGTGTTTTTCGCATGG+TGG | + | chr3_3:80476891-80476910 | None:intergenic | 50.0% |
| CATGCGAAAAACACTACCGC+CGG | - | chr3_3:80476892-80476911 | Msa0476650:three_prime_UTR | 50.0% | |
| ! | CTTCTTCGCGGTGGTAATGT+CGG | + | chr3_3:80476996-80477015 | None:intergenic | 50.0% |
| !! | AATTAGCTCTGTCGCGTCGA+CGG | - | chr3_3:80477017-80477036 | Msa0476650:three_prime_UTR | 50.0% |
| TTCTCCGCGTAACTCCTTCA+CGG | + | chr3_3:80477046-80477065 | None:intergenic | 50.0% | |
| GGGCAATTTCTCCTCTCGTT+GGG | - | chr3_3:80477286-80477305 | Msa0476650:three_prime_UTR | 50.0% | |
| GAATCAAGCATCCCAACGAG+AGG | + | chr3_3:80477300-80477319 | None:intergenic | 50.0% | |
| !! | TAGGAAGGGTATTGCACCAG+AGG | + | chr3_3:80477781-80477800 | None:intergenic | 50.0% |
| !! | AATTTGGTGTCGAGTCCCGA+GGG | - | chr3_3:80477996-80478015 | Msa0476650:CDS | 50.0% |
| AGGCAAGCCATGATTGAAGC+AGG | - | chr3_3:80478152-80478171 | Msa0476650:CDS | 50.0% | |
| ATTGCTTGAGCTGACGCTTG+TGG | - | chr3_3:80478187-80478206 | Msa0476650:CDS | 50.0% | |
| TTGCTTGAGCTGACGCTTGT+GGG | - | chr3_3:80478188-80478207 | Msa0476650:CDS | 50.0% | |
| GTAGTGCCTTGGCACAGAAA+AGG | - | chr3_3:80478210-80478229 | Msa0476650:CDS | 50.0% | |
| ! | TGATGCCCTTTTCTGTGCCA+AGG | + | chr3_3:80478219-80478238 | None:intergenic | 50.0% |
| !! | TGGCACAGAAAAGGGCATCA+AGG | - | chr3_3:80478219-80478238 | Msa0476650:CDS | 50.0% |
| ! | CAGGTTTCTGGGAGAAGTGA+TGG | - | chr3_3:80478275-80478294 | Msa0476650:CDS | 50.0% |
| ! | GTTTCTGGGAGAAGTGATGG+TGG | - | chr3_3:80478278-80478297 | Msa0476650:CDS | 50.0% |
| AGTGAAGCAAAACGCTCGGA+AGG | + | chr3_3:80478509-80478528 | None:intergenic | 50.0% | |
| !! | TTGCAGTTGATGGAGAGCAG+AGG | - | chr3_3:80478570-80478589 | Msa0476650:intron | 50.0% |
| ! | CGGTAGTGTTTTTCGCATGG+TGG | + | chr3_3:80476891-80476910 | None:intergenic | 50.0% |
| CATGCGAAAAACACTACCGC+CGG | - | chr3_3:80476892-80476911 | Msa0476650:three_prime_UTR | 50.0% | |
| ! | CTTCTTCGCGGTGGTAATGT+CGG | + | chr3_3:80476996-80477015 | None:intergenic | 50.0% |
| !! | AATTAGCTCTGTCGCGTCGA+CGG | - | chr3_3:80477017-80477036 | Msa0476650:three_prime_UTR | 50.0% |
| TTCTCCGCGTAACTCCTTCA+CGG | + | chr3_3:80477046-80477065 | None:intergenic | 50.0% | |
| GGGCAATTTCTCCTCTCGTT+GGG | - | chr3_3:80477286-80477305 | Msa0476650:three_prime_UTR | 50.0% | |
| GAATCAAGCATCCCAACGAG+AGG | + | chr3_3:80477300-80477319 | None:intergenic | 50.0% | |
| !! | TAGGAAGGGTATTGCACCAG+AGG | + | chr3_3:80477781-80477800 | None:intergenic | 50.0% |
| !! | AATTTGGTGTCGAGTCCCGA+GGG | - | chr3_3:80477996-80478015 | Msa0476650:CDS | 50.0% |
| AGGCAAGCCATGATTGAAGC+AGG | - | chr3_3:80478152-80478171 | Msa0476650:CDS | 50.0% | |
| ATTGCTTGAGCTGACGCTTG+TGG | - | chr3_3:80478187-80478206 | Msa0476650:CDS | 50.0% | |
| TTGCTTGAGCTGACGCTTGT+GGG | - | chr3_3:80478188-80478207 | Msa0476650:CDS | 50.0% | |
| GTAGTGCCTTGGCACAGAAA+AGG | - | chr3_3:80478210-80478229 | Msa0476650:CDS | 50.0% | |
| ! | TGATGCCCTTTTCTGTGCCA+AGG | + | chr3_3:80478219-80478238 | None:intergenic | 50.0% |
| !! | TGGCACAGAAAAGGGCATCA+AGG | - | chr3_3:80478219-80478238 | Msa0476650:CDS | 50.0% |
| ! | CAGGTTTCTGGGAGAAGTGA+TGG | - | chr3_3:80478275-80478294 | Msa0476650:CDS | 50.0% |
| ! | GTTTCTGGGAGAAGTGATGG+TGG | - | chr3_3:80478278-80478297 | Msa0476650:CDS | 50.0% |
| AGTGAAGCAAAACGCTCGGA+AGG | + | chr3_3:80478509-80478528 | None:intergenic | 50.0% | |
| !! | TTGCAGTTGATGGAGAGCAG+AGG | - | chr3_3:80478570-80478589 | Msa0476650:intron | 50.0% |
| ! | CGGCGGTAGTGTTTTTCGCA+TGG | + | chr3_3:80476894-80476913 | None:intergenic | 55.0% |
| ATGATGCGGCGGAAGGATGA+GGG | + | chr3_3:80476934-80476953 | None:intergenic | 55.0% | |
| AATGATGCGGCGGAAGGATG+AGG | + | chr3_3:80476935-80476954 | None:intergenic | 55.0% | |
| GTCGAAAATGATGCGGCGGA+AGG | + | chr3_3:80476941-80476960 | None:intergenic | 55.0% | |
| !! | AGGCGTCGAAAATGATGCGG+CGG | + | chr3_3:80476945-80476964 | None:intergenic | 55.0% |
| ! | GTAATGTCGGTGGTGTCGAG+AGG | + | chr3_3:80476983-80477002 | None:intergenic | 55.0% |
| GCAACCGTGAAGGAGTTACG+CGG | - | chr3_3:80477039-80477058 | Msa0476650:three_prime_UTR | 55.0% | |
| ! | AGAGGCACACTCGCAATGCT+CGG | - | chr3_3:80477264-80477283 | Msa0476650:three_prime_UTR | 55.0% |
| GGGGCAATTTCTCCTCTCGT+TGG | - | chr3_3:80477285-80477304 | Msa0476650:three_prime_UTR | 55.0% | |
| !! | CAATTTGGTGTCGAGTCCCG+AGG | - | chr3_3:80477995-80478014 | Msa0476650:CDS | 55.0% |
| ! | CGGCGGTAGTGTTTTTCGCA+TGG | + | chr3_3:80476894-80476913 | None:intergenic | 55.0% |
| ATGATGCGGCGGAAGGATGA+GGG | + | chr3_3:80476934-80476953 | None:intergenic | 55.0% | |
| AATGATGCGGCGGAAGGATG+AGG | + | chr3_3:80476935-80476954 | None:intergenic | 55.0% | |
| GTCGAAAATGATGCGGCGGA+AGG | + | chr3_3:80476941-80476960 | None:intergenic | 55.0% | |
| !! | AGGCGTCGAAAATGATGCGG+CGG | + | chr3_3:80476945-80476964 | None:intergenic | 55.0% |
| ! | GTAATGTCGGTGGTGTCGAG+AGG | + | chr3_3:80476983-80477002 | None:intergenic | 55.0% |
| GCAACCGTGAAGGAGTTACG+CGG | - | chr3_3:80477039-80477058 | Msa0476650:three_prime_UTR | 55.0% | |
| ! | AGAGGCACACTCGCAATGCT+CGG | - | chr3_3:80477264-80477283 | Msa0476650:three_prime_UTR | 55.0% |
| GGGGCAATTTCTCCTCTCGT+TGG | - | chr3_3:80477285-80477304 | Msa0476650:three_prime_UTR | 55.0% | |
| !! | CAATTTGGTGTCGAGTCCCG+AGG | - | chr3_3:80477995-80478014 | Msa0476650:CDS | 55.0% |
| GGAGAAGCGGAAGTTACCGG+CGG | + | chr3_3:80476911-80476930 | None:intergenic | 60.0% | |
| GGGGGAGAAGCGGAAGTTAC+CGG | + | chr3_3:80476914-80476933 | None:intergenic | 60.0% | |
| GGAAGGATGAGGGGGAGAAG+CGG | + | chr3_3:80476924-80476943 | None:intergenic | 60.0% | |
| TGATGCGGCGGAAGGATGAG+GGG | + | chr3_3:80476933-80476952 | None:intergenic | 60.0% | |
| TTCGACGCCTTAAGCTGCGG+CGG | - | chr3_3:80476955-80476974 | Msa0476650:three_prime_UTR | 60.0% | |
| ! | CTTCGCGGTGGTAATGTCGG+TGG | + | chr3_3:80476993-80477012 | None:intergenic | 60.0% |
| GCGGAGAAGACTCGACGAAG+CGG | - | chr3_3:80477190-80477209 | Msa0476650:three_prime_UTR | 60.0% | |
| AGACTCGACGAAGCGGCGAA+TGG | - | chr3_3:80477197-80477216 | Msa0476650:three_prime_UTR | 60.0% | |
| TGCGAGTGTGCCTCTCGCTT+CGG | + | chr3_3:80477259-80477278 | None:intergenic | 60.0% | |
| GAGGCACACTCGCAATGCTC+GGG | - | chr3_3:80477265-80477284 | Msa0476650:three_prime_UTR | 60.0% | |
| AGGCACACTCGCAATGCTCG+GGG | - | chr3_3:80477266-80477285 | Msa0476650:three_prime_UTR | 60.0% | |
| GACGCTTGTGGGTAGTGCCT+TGG | - | chr3_3:80478199-80478218 | Msa0476650:CDS | 60.0% | |
| GGAGAAGCGGAAGTTACCGG+CGG | + | chr3_3:80476911-80476930 | None:intergenic | 60.0% | |
| GGGGGAGAAGCGGAAGTTAC+CGG | + | chr3_3:80476914-80476933 | None:intergenic | 60.0% | |
| GGAAGGATGAGGGGGAGAAG+CGG | + | chr3_3:80476924-80476943 | None:intergenic | 60.0% | |
| TGATGCGGCGGAAGGATGAG+GGG | + | chr3_3:80476933-80476952 | None:intergenic | 60.0% | |
| TTCGACGCCTTAAGCTGCGG+CGG | - | chr3_3:80476955-80476974 | Msa0476650:three_prime_UTR | 60.0% | |
| ! | CTTCGCGGTGGTAATGTCGG+TGG | + | chr3_3:80476993-80477012 | None:intergenic | 60.0% |
| GCGGAGAAGACTCGACGAAG+CGG | - | chr3_3:80477190-80477209 | Msa0476650:three_prime_UTR | 60.0% | |
| AGACTCGACGAAGCGGCGAA+TGG | - | chr3_3:80477197-80477216 | Msa0476650:three_prime_UTR | 60.0% | |
| TGCGAGTGTGCCTCTCGCTT+CGG | + | chr3_3:80477259-80477278 | None:intergenic | 60.0% | |
| GAGGCACACTCGCAATGCTC+GGG | - | chr3_3:80477265-80477284 | Msa0476650:three_prime_UTR | 60.0% | |
| AGGCACACTCGCAATGCTCG+GGG | - | chr3_3:80477266-80477285 | Msa0476650:three_prime_UTR | 60.0% | |
| GACGCTTGTGGGTAGTGCCT+TGG | - | chr3_3:80478199-80478218 | Msa0476650:CDS | 60.0% | |
| GATGCGGCGGAAGGATGAGG+GGG | + | chr3_3:80476932-80476951 | None:intergenic | 65.0% | |
| AGAGGCTCCGCCGCAGCTTA+AGG | + | chr3_3:80476965-80476984 | None:intergenic | 65.0% | |
| GACGAAGCGGCGAATGGCAG+CGG | - | chr3_3:80477203-80477222 | Msa0476650:three_prime_UTR | 65.0% | |
| GATGCGGCGGAAGGATGAGG+GGG | + | chr3_3:80476932-80476951 | None:intergenic | 65.0% | |
| AGAGGCTCCGCCGCAGCTTA+AGG | + | chr3_3:80476965-80476984 | None:intergenic | 65.0% | |
| GACGAAGCGGCGAATGGCAG+CGG | - | chr3_3:80477203-80477222 | Msa0476650:three_prime_UTR | 65.0% | |
| ! | CGCGTCGACGGCAACCGTGA+AGG | - | chr3_3:80477029-80477048 | Msa0476650:three_prime_UTR | 70.0% |
| ! | CGCGTCGACGGCAACCGTGA+AGG | - | chr3_3:80477029-80477048 | Msa0476650:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 80476838 | 80479087 | 80476838 | ID=Msa0476650;Name=Msa0476650 |
| chr3_3 | mRNA | 80476838 | 80479087 | 80476838 | ID=Msa0476650-mRNA-1;Parent=Msa0476650;Name=Msa0476650-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0.33|0.66|0|0.33|3|522|414 |
| chr3_3 | exon | 80476838 | 80478299 | 80476838 | ID=Msa0476650-mRNA-1:exon:22031;Parent=Msa0476650-mRNA-1 |
| chr3_3 | exon | 80478492 | 80478520 | 80478492 | ID=Msa0476650-mRNA-1:exon:22030;Parent=Msa0476650-mRNA-1 |
| chr3_3 | exon | 80478812 | 80479087 | 80478812 | ID=Msa0476650-mRNA-1:exon:22029;Parent=Msa0476650-mRNA-1 |
| chr3_3 | CDS | 80478812 | 80479087 | 80478812 | ID=Msa0476650-mRNA-1:cds;Parent=Msa0476650-mRNA-1 |
| chr3_3 | CDS | 80478492 | 80478520 | 80478492 | ID=Msa0476650-mRNA-1:cds;Parent=Msa0476650-mRNA-1 |
| chr3_3 | CDS | 80477360 | 80478299 | 80477360 | ID=Msa0476650-mRNA-1:cds;Parent=Msa0476650-mRNA-1 |
| chr3_3 | three_prime_UTR | 80476838 | 80477359 | 80476838 | ID=Msa0476650-mRNA-1:three_prime_utr;Parent=Msa0476650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
