AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0524920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0524920 MtrunA17_Chr1g0149251 85.347 389 12 1 1 389 1 344 0.0 672
Msa0524920 MtrunA17_Chr4g0003441 81.491 389 27 1 1 389 145 488 0.0 645
Msa0524920 MtrunA17_Chr3g0137901 99.444 180 1 0 210 389 1 180 1.36e-129 369
Msa0524920 MtrunA17_Chr3g0137891 93.258 178 11 1 1 177 1 178 4.44e-117 340
Msa0524920 MtrunA17_Chr2g0299681 35.340 382 196 7 1 381 78 409 6.17e-63 207
Msa0524920 MtrunA17_Chr2g0329931 35.340 382 196 7 1 381 78 409 3.31e-62 205
Msa0524920 MtrunA17_Chr4g0070981 35.079 382 197 7 1 381 78 409 7.27e-62 204
Msa0524920 MtrunA17_Chr8g0342861 34.817 382 198 7 1 381 78 409 1.08e-60 201
Msa0524920 MtrunA17_Chr7g0247191 32.642 386 207 7 2 386 188 521 8.75e-59 199
Msa0524920 MtrunA17_Chr7g0247181 32.642 386 207 7 2 386 178 511 2.21e-58 198
Msa0524920 MtrunA17_Chr7g0247221 32.642 386 207 7 2 386 181 514 3.09e-58 197
Msa0524920 MtrunA17_Chr2g0297261 32.454 379 203 8 2 378 72 399 5.08e-56 189
Msa0524920 MtrunA17_Chr3g0107851 31.063 367 189 7 2 353 155 472 5.98e-47 168
Msa0524920 MtrunA17_Chr1g0176041 33.422 377 183 9 2 358 192 520 1.08e-46 168
Msa0524920 MtrunA17_Chr3g0121351 32.713 376 178 9 2 353 183 507 2.30e-46 167
Msa0524920 MtrunA17_Chr6g0483491 30.532 357 196 8 2 355 48 355 4.28e-44 158
Msa0524920 MtrunA17_Chr7g0236841 30.532 357 196 8 2 355 48 355 5.32e-44 158
Msa0524920 MtrunA17_Chr4g0063551 32.632 380 185 10 2 358 178 509 1.19e-43 160
Msa0524920 MtrunA17_Chr2g0330401 29.589 365 199 8 2 358 134 448 1.98e-43 157
Msa0524920 MtrunA17_Chr4g0076491 30.612 392 187 8 2 363 325 661 1.84e-42 157
Msa0524920 MtrunA17_Chr7g0271121 29.781 366 196 7 2 357 144 458 3.69e-42 157
Msa0524920 MtrunA17_Chr1g0193491 27.882 373 209 9 2 364 152 474 1.09e-41 155
Msa0524920 MtrunA17_Chr6g0449741 30.357 392 186 9 2 363 287 621 1.68e-40 152
Msa0524920 MtrunA17_Chr3g0095031 28.827 392 207 11 2 379 128 461 1.70e-40 150
Msa0524920 MtrunA17_Chr5g0442191 29.040 396 214 11 2 385 119 459 6.07e-40 149
Msa0524920 MtrunA17_Chr2g0310581 28.457 376 211 10 3 371 92 416 3.04e-37 141
Msa0524920 MtrunA17_Chr1g0200181 28.455 369 198 10 2 355 183 500 8.75e-37 140
Msa0524920 MtrunA17_Chr6g0449911 27.249 389 220 10 2 377 203 541 5.88e-36 139
Msa0524920 MtrunA17_Chr7g0263771 32.143 364 194 12 7 368 176 488 8.76e-36 138
Msa0524920 MtrunA17_Chr1g0179761 27.053 414 208 11 2 380 121 475 5.16e-35 134
Msa0524920 MtrunA17_Chr2g0293631 29.282 362 197 11 2 355 534 844 1.31e-34 135
Msa0524920 MtrunA17_Chr2g0300291 28.571 378 208 12 2 369 179 504 2.24e-34 134
Msa0524920 MtrunA17_Chr7g0270131 28.255 361 204 12 2 355 270 582 5.54e-34 134
Msa0524920 MtrunA17_Chr1g0157691 27.371 369 202 10 2 355 185 502 1.57e-33 131
Msa0524920 MtrunA17_Chr3g0114081 26.722 363 224 6 2 354 54 384 1.69e-33 131
Msa0524920 MtrunA17_Chr3g0098121 28.571 378 207 13 2 369 190 514 3.44e-33 131
Msa0524920 MtrunA17_Chr7g0236831 26.862 443 234 14 2 388 202 610 1.09e-32 130
Msa0524920 MtrunA17_Chr8g0347171 28.142 366 210 12 2 355 198 522 9.48e-32 126
Msa0524920 MtrunA17_Chr6g0475251 28.378 370 188 12 2 351 141 453 1.07e-31 127
Msa0524920 MtrunA17_Chr4g0040761 28.099 363 203 13 1 356 56 367 1.97e-31 126
Msa0524920 MtrunA17_Chr8g0347161 28.065 367 209 14 2 355 140 464 2.12e-31 125
Msa0524920 MtrunA17_Chr2g0309551 26.303 403 247 7 2 374 147 529 2.48e-31 125
Msa0524920 MtrunA17_Chr2g0277821 27.072 362 208 8 2 355 542 855 2.71e-31 126
Msa0524920 MtrunA17_Chr8g0347151 27.869 366 211 10 2 355 239 563 3.98e-31 125
Msa0524920 MtrunA17_Chr8g0386451 28.767 365 209 10 2 355 326 650 5.12e-31 125
Msa0524920 MtrunA17_Chr5g0409981 28.457 376 189 9 2 355 140 457 7.23e-31 123
Msa0524920 MtrunA17_Chr8g0342851 26.984 378 199 9 2 378 11 312 9.43e-29 114
Msa0524920 MtrunA17_Chr1g0204391 26.772 381 196 12 2 351 82 410 7.84e-28 115
Msa0524920 MtrunA17_Chr2g0307471 25.895 363 210 8 2 354 129 442 3.76e-27 113
Msa0524920 MtrunA17_Chr6g0461751 27.297 370 197 11 2 355 178 491 5.07e-26 109
Msa0524920 MtrunA17_Chr5g0443991 26.301 365 206 12 2 354 114 427 2.88e-25 107
Msa0524920 MtrunA17_Chr4g0062301 25.000 364 213 9 2 354 135 449 4.66e-25 107
Msa0524920 MtrunA17_Chr1g0169331 25.659 417 226 14 1 382 28 395 6.47e-25 105
Msa0524920 MtrunA17_Chr4g0029191 26.034 411 241 18 3 367 84 477 9.95e-25 106
Msa0524920 MtrunA17_Chr2g0301281 25.061 411 245 18 3 367 81 474 8.31e-24 103
Msa0524920 MtrunA17_Chr4g0025141 32.787 183 109 4 211 380 42 223 9.00e-24 98.6
Msa0524920 MtrunA17_Chr6g0466611 25.729 377 204 15 3 355 181 505 2.28e-22 99.4
Msa0524920 MtrunA17_Chr4g0058591 25.157 318 186 7 2 314 240 510 6.22e-22 97.4
Msa0524920 MtrunA17_Chr5g0429221 24.022 358 217 8 2 355 42 348 2.99e-20 91.7
Msa0524920 MtrunA17_Chr3g0145781 26.005 373 207 11 8 354 176 505 8.10e-20 91.3
Msa0524920 MtrunA17_Chr4g0074521 26.271 354 217 13 2 343 120 441 1.35e-18 87.4
Msa0524920 MtrunA17_Chr4g0039471 34.177 158 98 4 3 157 262 416 3.26e-17 82.8
Msa0524920 MtrunA17_Chr4g0004301 25.316 395 230 14 2 355 71 441 5.33e-16 79.3
Msa0524920 MtrunA17_Chr5g0434301 25.063 395 231 14 2 355 71 441 2.75e-15 77.4
Msa0524920 MtrunA17_Chr4g0025101 35.000 100 51 1 285 370 90 189 1.79e-14 72.0
Msa0524920 MtrunA17_Chr4g0025131 32.283 127 78 2 2 125 97 218 1.26e-12 67.8
Msa0524920 MtrunA17_Chr1g0155201 49.180 61 28 1 295 355 167 224 3.61e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0524920 AT5G11200.3 81.425 393 61 2 1 389 84 468 0.0 650
Msa0524920 AT5G11200.2 79.404 403 69 2 1 389 84 486 0.0 647
Msa0524920 AT5G11170.2 80.206 389 32 1 1 389 1 344 0.0 636
Msa0524920 AT5G11170.1 80.206 389 32 1 1 389 84 427 0.0 635
Msa0524920 AT5G11200.1 80.206 389 32 1 1 389 84 427 0.0 635
Msa0524920 AT1G72730.1 34.817 382 198 7 1 381 79 410 4.49e-62 205
Msa0524920 AT3G13920.4 35.079 382 197 7 1 381 72 403 8.09e-62 204
Msa0524920 AT3G13920.1 35.079 382 197 7 1 381 77 408 9.28e-62 204
Msa0524920 AT3G13920.3 35.079 382 197 7 1 381 67 398 1.10e-61 204
Msa0524920 AT2G45810.1 33.679 386 203 8 2 386 193 526 1.13e-60 204
Msa0524920 AT3G61240.2 33.938 386 202 9 2 386 163 496 5.48e-60 202
Msa0524920 AT3G61240.1 33.938 386 202 9 2 386 163 496 5.48e-60 202
Msa0524920 AT1G54270.2 34.555 382 199 7 1 381 72 403 7.31e-60 199
Msa0524920 AT1G54270.1 34.555 382 199 7 1 381 77 408 9.91e-60 199
Msa0524920 AT3G13920.5 36.236 356 177 6 1 355 81 387 2.63e-59 198
Msa0524920 AT3G13920.2 36.236 356 177 6 1 355 77 383 2.77e-59 198
Msa0524920 AT4G00660.1 33.161 386 205 7 2 386 170 503 4.99e-59 200
Msa0524920 AT4G00660.2 33.161 386 205 7 2 386 170 503 4.99e-59 200
Msa0524920 AT3G19760.1 32.718 379 202 8 2 378 74 401 3.22e-57 192
Msa0524920 AT1G51380.1 33.246 382 196 10 2 378 61 388 6.33e-55 186
Msa0524920 AT3G53110.1 28.827 392 212 11 3 377 134 475 8.44e-44 159
Msa0524920 AT1G55150.1 30.707 368 191 10 2 358 138 452 7.28e-43 156
Msa0524920 AT3G58570.1 32.877 365 191 9 2 353 185 508 1.49e-42 157
Msa0524920 AT1G55150.2 30.707 368 191 10 2 358 163 477 1.67e-42 156
Msa0524920 AT3G58510.1 31.622 370 187 9 2 353 190 511 8.08e-42 155
Msa0524920 AT3G58510.3 31.622 370 187 9 2 353 190 511 8.08e-42 155
Msa0524920 AT3G58510.2 31.622 370 187 9 2 353 190 511 8.08e-42 155
Msa0524920 AT5G63120.2 28.611 360 203 9 2 355 204 515 5.19e-41 153
Msa0524920 AT5G26742.3 28.415 366 203 6 2 357 48 364 1.63e-40 152
Msa0524920 AT5G26742.1 28.415 366 203 6 2 357 141 457 2.62e-40 152
Msa0524920 AT5G26742.2 28.415 366 203 6 2 357 141 457 2.64e-40 152
Msa0524920 AT5G60990.1 29.155 367 198 8 2 355 48 365 4.47e-40 148
Msa0524920 AT1G16280.1 30.027 373 203 9 2 367 97 418 4.82e-40 149
Msa0524920 AT3G22330.1 30.328 366 188 10 2 355 143 453 5.56e-40 150
Msa0524920 AT3G22310.2 31.564 358 186 10 2 351 155 461 8.63e-40 149
Msa0524920 AT3G22310.1 31.564 358 186 10 2 351 155 461 9.93e-40 149
Msa0524920 AT1G28180.1 29.551 379 204 9 2 370 12 337 1.07e-39 145
Msa0524920 AT2G42520.2 31.635 373 185 12 2 353 198 521 1.69e-39 149
Msa0524920 AT2G42520.1 31.635 373 185 12 2 353 198 521 1.69e-39 149
Msa0524920 AT2G42520.3 31.635 373 185 12 2 353 198 521 1.69e-39 149
Msa0524920 AT2G33730.1 29.288 379 194 7 2 355 352 681 2.00e-39 149
Msa0524920 AT1G31970.1 31.694 366 191 9 2 355 153 471 7.04e-37 140
Msa0524920 AT3G01540.1 28.462 390 214 13 2 377 197 535 4.79e-36 139
Msa0524920 AT3G01540.4 28.462 390 214 13 2 377 197 535 5.48e-36 139
Msa0524920 AT3G01540.2 28.462 390 214 13 2 377 197 535 5.48e-36 139
Msa0524920 AT3G01540.3 28.462 390 214 13 2 377 197 535 5.48e-36 139
Msa0524920 AT4G16630.1 27.877 391 217 12 2 380 206 543 6.15e-36 140
Msa0524920 AT5G14610.7 29.805 359 195 11 2 353 69 377 1.76e-35 136
Msa0524920 AT5G14610.3 29.805 359 195 11 2 353 69 377 1.76e-35 136
Msa0524920 AT5G14610.6 29.805 359 195 11 2 353 200 508 2.77e-35 137
Msa0524920 AT5G14610.2 29.805 359 195 11 2 353 200 508 2.78e-35 137
Msa0524920 AT2G47330.1 29.086 361 201 10 2 355 267 579 3.20e-35 137
Msa0524920 AT5G14610.5 29.805 359 195 11 2 353 208 516 3.75e-35 137
Msa0524920 AT5G14610.1 29.805 359 195 11 2 353 268 576 4.71e-35 137
Msa0524920 AT1G20920.2 27.747 364 203 9 2 355 230 543 4.70e-34 134
Msa0524920 AT5G51280.1 27.248 367 205 8 2 355 185 502 6.25e-34 133
Msa0524920 AT4G33370.1 28.883 367 199 8 2 355 136 453 1.23e-33 132
Msa0524920 AT1G20920.4 27.671 365 202 9 2 355 568 881 4.61e-33 131
Msa0524920 AT1G20920.6 27.671 365 202 9 2 355 568 881 4.61e-33 131
Msa0524920 AT1G20920.3 27.671 365 202 9 2 355 568 881 4.61e-33 131
Msa0524920 AT1G20920.7 27.671 365 202 9 2 355 568 881 4.61e-33 131
Msa0524920 AT1G20920.5 27.671 365 202 9 2 355 568 881 4.61e-33 131
Msa0524920 AT1G20920.1 27.671 365 202 9 2 355 568 881 4.61e-33 131
Msa0524920 AT5G63630.1 27.100 369 210 8 2 355 93 417 5.79e-33 129
Msa0524920 AT3G06480.1 27.461 386 224 9 2 381 474 809 1.53e-32 130
Msa0524920 AT5G63630.2 27.100 369 210 8 2 355 287 611 1.64e-32 129
Msa0524920 AT1G71370.1 26.359 368 207 8 2 354 55 373 3.34e-32 127
Msa0524920 AT3G16840.2 28.506 435 238 12 2 389 231 639 7.03e-32 128
Msa0524920 AT3G16840.1 28.506 435 238 12 2 389 230 638 7.30e-32 128
Msa0524920 AT5G62190.1 28.117 409 213 12 2 387 135 485 1.16e-31 127
Msa0524920 AT1G12770.2 25.781 384 229 10 2 352 149 509 1.44e-31 126
Msa0524920 AT1G12770.1 25.781 384 229 10 2 352 149 509 1.44e-31 126
Msa0524920 AT1G63250.1 28.338 367 209 10 2 355 367 692 1.36e-30 124
Msa0524920 AT1G77030.1 27.298 359 209 13 1 355 66 376 5.86e-30 122
Msa0524920 AT5G05450.1 25.068 367 222 7 2 354 55 382 6.45e-30 121
Msa0524920 AT3G09720.2 29.679 374 186 14 7 366 185 495 6.68e-30 121
Msa0524920 AT3G09720.1 29.679 374 186 14 7 366 185 495 6.68e-30 121
Msa0524920 AT5G08610.1 27.027 370 209 10 2 355 421 745 8.79e-30 122
Msa0524920 AT3G02065.1 27.568 370 197 11 2 355 12 326 1.62e-29 117
Msa0524920 AT5G08620.1 25.936 374 208 8 2 355 119 443 1.72e-29 120
Msa0524920 AT3G02065.3 27.913 369 195 11 3 355 150 463 2.27e-28 116
Msa0524920 AT3G02065.2 27.913 369 195 11 3 355 150 463 2.27e-28 116
Msa0524920 AT2G07750.1 27.520 367 212 10 2 355 414 739 5.66e-28 116
Msa0524920 AT3G18600.1 26.741 359 204 12 2 351 128 436 6.84e-27 112
Msa0524920 AT5G65900.1 27.493 371 187 15 2 351 193 502 1.14e-24 106
Msa0524920 AT5G63120.1 26.332 319 181 9 2 314 204 474 1.86e-24 105
Msa0524920 AT5G63120.3 26.462 325 183 10 2 320 204 478 1.92e-24 105
Msa0524920 AT5G63120.4 26.462 325 183 10 2 320 204 478 1.92e-24 105
Msa0524920 AT5G63120.5 26.462 325 183 10 2 320 204 478 1.92e-24 105
Msa0524920 AT4G09730.1 26.862 376 201 14 3 355 152 476 5.63e-24 104
Msa0524920 AT2G40700.1 27.068 399 231 15 2 354 70 454 7.99e-24 103
Msa0524920 AT1G51380.2 31.518 257 124 7 2 256 61 267 1.07e-23 99.8
Msa0524920 AT4G15850.1 27.344 384 235 13 2 355 74 443 2.39e-23 102
Msa0524920 AT1G51380.4 35.233 193 119 5 2 193 61 248 8.89e-22 95.1
Msa0524920 AT1G51380.3 35.233 193 119 5 2 193 61 248 9.34e-22 95.1
Msa0524920 AT5G54910.1 25.538 372 209 15 2 359 110 427 9.56e-21 94.7
Msa0524920 AT5G19210.2 25.344 363 207 11 2 343 115 434 1.24e-20 93.6
Msa0524920 AT5G14610.4 27.711 332 181 12 2 326 208 487 1.43e-20 93.6
Msa0524920 AT3G06480.2 25.610 328 189 8 2 323 474 752 1.08e-18 88.6
Msa0524920 AT3G06980.1 24.661 369 224 10 4 354 415 747 2.45e-17 84.3
Msa0524920 AT3G09620.1 34.320 169 98 6 2 161 435 599 4.24e-14 74.7
Msa0524920 AT3G09620.1 45.000 60 33 0 296 355 660 719 1.08e-11 67.0
Msa0524920 AT3G09620.2 34.320 169 98 6 2 161 436 600 4.43e-14 74.7
Msa0524920 AT3G09620.2 45.000 60 33 0 296 355 661 720 1.06e-11 67.0
Msa0524920 AT5G19210.1 24.497 298 165 9 63 343 23 277 5.11e-14 72.8
Msa0524920 AT5G19210.3 24.497 298 165 9 63 343 23 277 5.11e-14 72.8

Find 127 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACTCTTGTATACTTTAAT+AGG 0.207564 3_4:+78465925 Msa0524920:three_prime_UTR
CAGCAGATTGATCCTGTTCC+AGG 0.258533 3_4:+78462128 Msa0524920:CDS
TATCAAATCATTCATGATTT+CGG 0.280084 3_4:+78466031 Msa0524920:three_prime_UTR
ATAAAACAAACCTTTCTTCT+TGG 0.281030 3_4:-78463684 None:intergenic
ATTTGACAGTAAATCATGTT+AGG 0.289356 3_4:-78463317 None:intergenic
TTACTTACCGTTGGCTCCTT+CGG 0.298580 3_4:+78461978 Msa0524920:five_prime_UTR
ATCATAGTGGATATTGCTTT+GGG 0.302530 3_4:+78465656 Msa0524920:exon
GTTGGCCGAGCTGGAAGATT+TGG 0.303568 3_4:+78464739 Msa0524920:CDS
TACTTACCGTTGGCTCCTTC+GGG 0.309489 3_4:+78461979 Msa0524920:five_prime_UTR
CATCATAGTGGATATTGCTT+TGG 0.320279 3_4:+78465655 Msa0524920:exon
TAAAACAAACCTTTCTTCTT+GGG 0.342819 3_4:-78463683 None:intergenic
TTTGTTCTGAAGTGTACTTT+TGG 0.361228 3_4:+78466067 Msa0524920:three_prime_UTR
CATCTATCACAATACTGTTC+TGG 0.370649 3_4:+78461899 Msa0524920:five_prime_UTR
GAAGCCAAGTTAACCCTTCA+TGG 0.374844 3_4:+78463377 Msa0524920:CDS
GTAATTTGTCAAGCTAAATC+TGG 0.375081 3_4:+78462068 Msa0524920:CDS
AATTTGTTCCTTTCAGCCTA+TGG 0.384694 3_4:+78463337 Msa0524920:CDS
GATTCTTGTAGCTACAGATT+TGG 0.387454 3_4:+78464530 Msa0524920:CDS
GGGGCAACACTTGGTCCGTT+TGG 0.390379 3_4:+78465676 Msa0524920:three_prime_UTR
AAATGTAATTGCAAGGCCTT+TGG 0.392224 3_4:-78464764 None:intergenic
ACTTTACAGGTTGGCCGAGC+TGG 0.402167 3_4:+78464730 Msa0524920:intron
GCCAATGCTAGTATTCTTCC+AGG 0.402281 3_4:-78462420 None:intergenic
TGTTAGTAGAGCAGCTGAGC+TGG 0.405799 3_4:+78463606 Msa0524920:CDS
CAAATTGTTGTTGGAACGCC+TGG 0.413036 3_4:+78462402 Msa0524920:CDS
CGGTGATGCTGTTGTTGAAC+TGG 0.416246 3_4:+78465898 Msa0524920:three_prime_UTR
TCTGGAGAACTAACATGCTT+TGG 0.425799 3_4:+78461917 Msa0524920:five_prime_UTR
GTTTCAAGGAGGGGCATACT+AGG 0.426560 3_4:+78464508 Msa0524920:CDS
TTGATAGAAATGTGAGGAAA+AGG 0.428212 3_4:-78466014 None:intergenic
CCAGAGTGAATGCATATAGA+TGG 0.428290 3_4:-78463655 None:intergenic
GTGTTAAACATTCTGTATGA+TGG 0.430791 3_4:+78465811 Msa0524920:three_prime_UTR
TAACAACTTGGTTGAAGTCT+AGG 0.431244 3_4:-78463570 None:intergenic
GCAGAAACTTGGCCTGGAAC+AGG 0.433044 3_4:-78462140 None:intergenic
AAGTAAGTGTCTGCAGAATC+AGG 0.433468 3_4:-78464606 None:intergenic
TATTGCTTTGGGGCAACACT+TGG 0.446693 3_4:+78465667 Msa0524920:three_prime_UTR
CAAATTAAAAGCGTCAGAAA+TGG 0.447273 3_4:+78461949 Msa0524920:five_prime_UTR
ACCCTCATCTACTGGATTTG+TGG 0.452586 3_4:+78465710 Msa0524920:three_prime_UTR
TGATAAGATGCTTGAATCAC+TGG 0.464819 3_4:+78462497 Msa0524920:CDS
AGGGTCCGTCCTCAAGCTAA+TGG 0.468759 3_4:-78463297 None:intergenic
TGTAGGTTGAAGCGTTATAG+AGG 0.469448 3_4:+78464486 Msa0524920:intron
GCGTTCCAACAACAATTTGA+GGG 0.474065 3_4:-78462398 None:intergenic
CACAAGAGAACTAGCTTACC+AGG 0.475324 3_4:+78462178 Msa0524920:CDS
TTTGACAGTAAATCATGTTA+GGG 0.483744 3_4:-78463316 None:intergenic
TAACGATGAGCTAAAGGAAC+TGG 0.484575 3_4:-78466173 None:intergenic
GAGTGCCCTCAAATTGTTGT+TGG 0.484980 3_4:+78462393 Msa0524920:CDS
GTATGAGTACCCTCATCTAC+TGG 0.485739 3_4:+78465702 Msa0524920:three_prime_UTR
GAAGCGTTATAGAGGTTTCA+AGG 0.487117 3_4:+78464494 Msa0524920:CDS
TGTCAAGCTAAATCTGGAAT+GGG 0.490633 3_4:+78462074 Msa0524920:CDS
CAGTCCATGAAGGGTTAACT+TGG 0.491161 3_4:-78463381 None:intergenic
TTGTCAAGCTAAATCTGGAA+TGG 0.491537 3_4:+78462073 Msa0524920:CDS
CTGCAGACACTTACTTGCAC+AGG 0.493193 3_4:+78464613 Msa0524920:CDS
CAAGAAGATCATTCAACTTG+CGG 0.494607 3_4:-78463543 None:intergenic
GCTACAGATTTGGTTGGTAG+AGG 0.500164 3_4:+78464540 Msa0524920:CDS
ACAGAACAAGTGCAGAAACT+TGG 0.502577 3_4:-78462151 None:intergenic
TGGACAAGAACTGTGGTTCA+AGG 0.509662 3_4:+78463241 Msa0524920:CDS
ACCATGCTGATGTCGGGCCT+AGG 0.510799 3_4:+78465770 Msa0524920:three_prime_UTR
TCCGTGTAACGATGAGCTAA+AGG 0.511745 3_4:-78466179 None:intergenic
GATTTGACCATGCTGATGTC+GGG 0.511765 3_4:+78465764 Msa0524920:three_prime_UTR
CATCATAACTTGCTTATCGT+GGG 0.512480 3_4:-78462659 None:intergenic
AAGACAGCAACCTTCAGATC+GGG 0.512540 3_4:-78462324 None:intergenic
ACAAGTGCAGAAACTTGGCC+TGG 0.514338 3_4:-78462146 None:intergenic
CAACACTTGGTCCGTTTGGA+CGG 0.514563 3_4:+78465680 Msa0524920:three_prime_UTR
GCACTACATCAAATTGAAAG+AGG 0.517823 3_4:+78463510 Msa0524920:intron
AACCCTTCATGGACTGGTGC+AGG 0.517866 3_4:+78463388 Msa0524920:CDS
ATAAATTTCCATAGGCTGAA+AGG 0.521521 3_4:-78463345 None:intergenic
CAAAGCAATATCCACTATGA+TGG 0.521600 3_4:-78465654 None:intergenic
CTTGTAGCTACAGATTTGGT+TGG 0.522187 3_4:+78464534 Msa0524920:CDS
AAATCATTCATGATTTCGGA+TGG 0.522299 3_4:+78466035 Msa0524920:three_prime_UTR
TTGTGGATTCCATTAGCTTG+AGG 0.522549 3_4:+78463288 Msa0524920:CDS
GAAGAATACTAGCATTGGCT+AGG 0.526509 3_4:+78462424 Msa0524920:CDS
GTGATTTGCAGGTTCAGTCA+AGG 0.528181 3_4:+78464885 Msa0524920:intron
AACAAAGTACAACACAACTA+AGG 0.529373 3_4:-78465845 None:intergenic
CTACAGATTTGGTTGGTAGA+GGG 0.530961 3_4:+78464541 Msa0524920:CDS
CCATCTATATGCATTCACTC+TGG 0.537546 3_4:+78463655 Msa0524920:CDS
CAAGTTAACCCTTCATGGAC+TGG 0.538235 3_4:+78463382 Msa0524920:CDS
TGGTTCCAAATCTTCCAGCT+CGG 0.539236 3_4:-78464744 None:intergenic
AAAGACATGAGCAACAAAAC+CGG 0.540312 3_4:-78465966 None:intergenic
CTGGCATGTCCCAAGAAGAA+AGG 0.541548 3_4:+78463674 Msa0524920:CDS
ACCTCAAGCAATCCTCGGAA+TGG 0.545341 3_4:+78462043 Msa0524920:exon
GTAGAGGTATCAATCTGCTC+AGG 0.546365 3_4:-78464932 None:intergenic
ATCCACAACGAAATGAATGA+TGG 0.547414 3_4:-78463273 None:intergenic
GGCGTTCCAACAACAATTTG+AGG 0.547645 3_4:-78462399 None:intergenic
AACAACTTGGTTGAAGTCTA+GGG 0.548156 3_4:-78463569 None:intergenic
GTTATAGAGGTTTCAAGGAG+GGG 0.549962 3_4:+78464499 Msa0524920:CDS
GCCTGGAAGAATACTAGCAT+TGG 0.549976 3_4:+78462419 Msa0524920:CDS
TCATCAACATAAATTTCCAT+AGG 0.552344 3_4:-78463353 None:intergenic
CGCCACAAATCCAGTAGATG+AGG 0.556237 3_4:-78465712 None:intergenic
TGATTTGACCATGCTGATGT+CGG 0.556376 3_4:+78465763 Msa0524920:three_prime_UTR
AGATATGCCATGAGTTTGAG+AGG 0.557167 3_4:+78462286 Msa0524920:intron
GGGTACTCATACCGTCCAAA+CGG 0.561945 3_4:-78465691 None:intergenic
ACATCATAACTTGCTTATCG+TGG 0.563979 3_4:-78462660 None:intergenic
TCCTTTAGCTCATCGTTACA+CGG 0.564276 3_4:+78466178 Msa0524920:three_prime_UTR
AAAGTGCTTACTGTAGGTAG+AGG 0.564836 3_4:-78464948 None:intergenic
TACTAAACCTCTCAAACTCA+TGG 0.569538 3_4:-78462293 None:intergenic
TGCATACCTCAAGCAATCCT+CGG 0.569749 3_4:+78462038 Msa0524920:five_prime_UTR
AAAAGGCCCGAAGGAGCCAA+CGG 0.573751 3_4:-78461985 None:intergenic
AAAGACAGCAACCTTCAGAT+CGG 0.576558 3_4:-78462325 None:intergenic
CGTTATAGAGGTTTCAAGGA+GGG 0.577094 3_4:+78464498 Msa0524920:CDS
CTACCTGCACCAGTCCATGA+AGG 0.577194 3_4:-78463391 None:intergenic
ATGAAACAAATGTAATTGCA+AGG 0.583398 3_4:-78464771 None:intergenic
TACCTACTTACCCGATCTGA+AGG 0.587362 3_4:+78462314 Msa0524920:CDS
ATCCATCATTCATTTCGTTG+TGG 0.590381 3_4:+78463271 Msa0524920:CDS
GGACAAGAACTGTGGTTCAA+GGG 0.591425 3_4:+78463242 Msa0524920:CDS
GATCAACGGAAAAGTAGCCT+AGG 0.594351 3_4:-78465787 None:intergenic
GCTGGAAGATTTGGAACCAA+AGG 0.594660 3_4:+78464748 Msa0524920:CDS
GGATTCCATTAGCTTGAGGA+CGG 0.597526 3_4:+78463292 Msa0524920:CDS
GTTGAAACAGAATATCGTAC+CGG 0.606839 3_4:+78465947 Msa0524920:three_prime_UTR
GACAAATTACATCCATTCCG+AGG 0.613516 3_4:-78462055 None:intergenic
CTCATCTACTGGATTTGTGG+CGG 0.619714 3_4:+78465713 Msa0524920:three_prime_UTR
TGCAGACACTTACTTGCACA+GGG 0.621788 3_4:+78464614 Msa0524920:CDS
AGGAACTGGTAGCATAGACA+TGG 0.626266 3_4:-78466159 None:intergenic
TACCTGCACCAGTCCATGAA+GGG 0.627063 3_4:-78463390 None:intergenic
AACCTTCAGATCGGGTAAGT+AGG 0.628828 3_4:-78462316 None:intergenic
AAGAATACTAGCATTGGCTA+GGG 0.631042 3_4:+78462425 Msa0524920:CDS
GAATGTTTAACACCGATCAA+CGG 0.635548 3_4:-78465801 None:intergenic
CATGTGCAGTGCCATCATAG+TGG 0.639227 3_4:+78465643 Msa0524920:intron
ATCATAACTTGCTTATCGTG+GGG 0.649459 3_4:-78462658 None:intergenic
GCCACAAATCCAGTAGATGA+GGG 0.650591 3_4:-78465711 None:intergenic
GCCTAGGCCCGACATCAGCA+TGG 0.650908 3_4:-78465771 None:intergenic
TCCATTCCGAGGATTGCTTG+AGG 0.655490 3_4:-78462044 None:intergenic
GGTCAATATCAAAGTTCACA+AGG 0.667495 3_4:+78462356 Msa0524920:CDS
ACTGGTAGCATAGACATGGA+AGG 0.671581 3_4:-78466155 None:intergenic
TCATAGTGGATATTGCTTTG+GGG 0.681035 3_4:+78465657 Msa0524920:exon
CTGCAAGGAGACAAAACACG+TGG 0.696203 3_4:+78463221 Msa0524920:CDS
GATAAGATGCTTGAATCACT+GGG 0.702068 3_4:+78462498 Msa0524920:CDS
AATGATTTGATAGAAATGTG+AGG 0.712968 3_4:-78466020 None:intergenic
GCGTTATAGAGGTTTCAAGG+AGG 0.725932 3_4:+78464497 Msa0524920:CDS
AAACACGTGGACAAGAACTG+TGG 0.734092 3_4:+78463234 Msa0524920:CDS
AGTCGAGAGAACAAAGACAG+CGG 0.750658 3_4:-78462102 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCTTATTATTTTATTTGT+AGG + chr3_4:78464469-78464488 Msa0524920:intron 10.0%
!!! ATTTATTTTCAATTTTTCTT+AGG + chr3_4:78465038-78465057 Msa0524920:intron 10.0%
!!! TACTTTTTTCAAACATTTTT+GGG + chr3_4:78463783-78463802 Msa0524920:intron 15.0%
!! ATAAATGAAAGATCAAAATA+AGG - chr3_4:78464660-78464679 None:intergenic 15.0%
!!! TATTTACTTTCACTAAATTT+TGG + chr3_4:78464677-78464696 Msa0524920:intron 15.0%
!! TTTATATTTATGATTTGAAC+TGG + chr3_4:78465242-78465261 Msa0524920:intron 15.0%
!!! TTTTCTCGTTAAATTTTTTT+TGG - chr3_4:78465502-78465521 None:intergenic 15.0%
!! TAATATTCAAACTAAACAGA+AGG - chr3_4:78462539-78462558 None:intergenic 20.0%
!!! GTACTTTTTTCAAACATTTT+TGG + chr3_4:78463782-78463801 Msa0524920:intron 20.0%
!!! ACTTTTTTCAAACATTTTTG+GGG + chr3_4:78463784-78463803 Msa0524920:intron 20.0%
!! TTAGTGTTAATACATTTAAG+TGG - chr3_4:78463829-78463848 None:intergenic 20.0%
!!! TTTTTAACTTTGAATGACAA+AGG + chr3_4:78464330-78464349 Msa0524920:intron 20.0%
!!! TTTCACTAAATTTTGGTTTA+GGG + chr3_4:78464684-78464703 Msa0524920:intron 20.0%
!! AACATAATTAGAAATGCTAA+TGG - chr3_4:78464861-78464880 None:intergenic 20.0%
!!! TTTTATCAATGCATTACAAA+AGG + chr3_4:78465164-78465183 Msa0524920:intron 20.0%
!!! TTTTTATGTTTCATGATGTT+AGG + chr3_4:78465314-78465333 Msa0524920:intron 20.0%
!!! CATATGTTCTACATTTTTTA+GGG - chr3_4:78465469-78465488 None:intergenic 20.0%
!!! ACATATGTTCTACATTTTTT+AGG - chr3_4:78465470-78465489 None:intergenic 20.0%
!! TATCAAATCATTCATGATTT+CGG + chr3_4:78466031-78466050 Msa0524920:three_prime_UTR 20.0%
!!! CTCAAAATCTGTTTTTTTTT+GGG + chr3_4:78466094-78466113 Msa0524920:three_prime_UTR 20.0%
!!! TTTAGTTTGAATATTACCAC+TGG + chr3_4:78462543-78462562 Msa0524920:intron 25.0%
! TAAGAACAATAAAAACCACA+TGG - chr3_4:78462583-78462602 None:intergenic 25.0%
! ATCAATCTTTACTTCTGATA+GGG + chr3_4:78462834-78462853 Msa0524920:intron 25.0%
! TGTTAAGTAAAATTGGACAA+AGG - chr3_4:78462882-78462901 None:intergenic 25.0%
! TTTGACAGTAAATCATGTTA+GGG - chr3_4:78463319-78463338 None:intergenic 25.0%
! ATTTGACAGTAAATCATGTT+AGG - chr3_4:78463320-78463339 None:intergenic 25.0%
! TCATCAACATAAATTTCCAT+AGG - chr3_4:78463356-78463375 None:intergenic 25.0%
! TATAAGCAAACAACTTGAAA+AGG - chr3_4:78463418-78463437 None:intergenic 25.0%
!!! ACAGATAAGACATTTTAAGA+GGG - chr3_4:78463462-78463481 None:intergenic 25.0%
!! TACAGATAAGACATTTTAAG+AGG - chr3_4:78463463-78463482 None:intergenic 25.0%
!! TTTTCACAAAGATAACAACT+TGG - chr3_4:78463585-78463604 None:intergenic 25.0%
! TAAAACAAACCTTTCTTCTT+GGG - chr3_4:78463686-78463705 None:intergenic 25.0%
! ATAAAACAAACCTTTCTTCT+TGG - chr3_4:78463687-78463706 None:intergenic 25.0%
!! TTCATGTTTTGCAATTCTAT+TGG + chr3_4:78463739-78463758 Msa0524920:intron 25.0%
!! TGTGAGCTTTTTGAATATAA+GGG + chr3_4:78463958-78463977 Msa0524920:intron 25.0%
!! AGCATTGAATAAATCTCTTA+GGG - chr3_4:78464211-78464230 None:intergenic 25.0%
!! TAGCATTGAATAAATCTCTT+AGG - chr3_4:78464212-78464231 None:intergenic 25.0%
! TTGTTCTTTCAAATCAAAAG+TGG - chr3_4:78464293-78464312 None:intergenic 25.0%
! GAATTGTCAATAGACAATTA+AGG - chr3_4:78464392-78464411 None:intergenic 25.0%
!!! CTTTCACTAAATTTTGGTTT+AGG + chr3_4:78464683-78464702 Msa0524920:intron 25.0%
! ATGAAACAAATGTAATTGCA+AGG - chr3_4:78464774-78464793 None:intergenic 25.0%
!! GTATTCCATTTGATTTCTAA+TGG + chr3_4:78465102-78465121 Msa0524920:intron 25.0%
! ATTGACCATTAGAAATCAAA+TGG - chr3_4:78465110-78465129 None:intergenic 25.0%
! AAATGTAGAACATATGTTTG+TGG + chr3_4:78465473-78465492 Msa0524920:intron 25.0%
! ATCAAACTAATTATGCAACT+TGG - chr3_4:78465556-78465575 None:intergenic 25.0%
! AATATTAATCTCTTCTGACT+TGG + chr3_4:78465613-78465632 Msa0524920:intron 25.0%
! ACACTCTTGTATACTTTAAT+AGG + chr3_4:78465925-78465944 Msa0524920:three_prime_UTR 25.0%
! AATGATTTGATAGAAATGTG+AGG - chr3_4:78466023-78466042 None:intergenic 25.0%
!!! GCTCAAAATCTGTTTTTTTT+TGG + chr3_4:78466093-78466112 Msa0524920:three_prime_UTR 25.0%
!!! TATTTTCAGATTGATTTTGC+AGG + chr3_4:78466121-78466140 Msa0524920:three_prime_UTR 25.0%
!! CAAATTAAAAGCGTCAGAAA+TGG + chr3_4:78461949-78461968 Msa0524920:five_prime_UTR 30.0%
!!! TGGTTTATTTTACTTACCGT+TGG + chr3_4:78461969-78461988 Msa0524920:five_prime_UTR 30.0%
GATGATGAAGCAAAGAAAAA+AGG - chr3_4:78462005-78462024 None:intergenic 30.0%
! GTAATTTGTCAAGCTAAATC+TGG + chr3_4:78462068-78462087 Msa0524920:CDS 30.0%
TAGCTTACCAGGTATTTATT+GGG + chr3_4:78462189-78462208 Msa0524920:intron 30.0%
!!! ATGTTTTTTTTGCAGACATG+AGG + chr3_4:78462605-78462624 Msa0524920:intron 30.0%
!!! GCATAAATTTTTTGCAGACT+GGG - chr3_4:78462714-78462733 None:intergenic 30.0%
!!! TGCATAAATTTTTTGCAGAC+TGG - chr3_4:78462715-78462734 None:intergenic 30.0%
ATGCAAGATGTAATTTCTCA+TGG + chr3_4:78462730-78462749 Msa0524920:intron 30.0%
TCAAACAACTAAAAACCTCA+GGG - chr3_4:78462801-78462820 None:intergenic 30.0%
TTCAAACAACTAAAAACCTC+AGG - chr3_4:78462802-78462821 None:intergenic 30.0%
!! TTTTAGTTGTTTGAATGCTG+TGG + chr3_4:78462807-78462826 Msa0524920:intron 30.0%
CATCAATCTTTACTTCTGAT+AGG + chr3_4:78462833-78462852 Msa0524920:intron 30.0%
AGCAGGTTGTTAAGTAAAAT+TGG - chr3_4:78462889-78462908 None:intergenic 30.0%
! AATTTTACTTAACAACCTGC+TGG + chr3_4:78462888-78462907 Msa0524920:intron 30.0%
! TCTCTAATATTTGCTAGTGT+TGG + chr3_4:78463037-78463056 Msa0524920:intron 30.0%
! CTCTAATATTTGCTAGTGTT+GGG + chr3_4:78463038-78463057 Msa0524920:intron 30.0%
!!! ATGGGTTTTTTTCATTGTGT+TGG + chr3_4:78463062-78463081 Msa0524920:intron 30.0%
!!! TGGGTTTTTTTCATTGTGTT+GGG + chr3_4:78463063-78463082 Msa0524920:intron 30.0%
!!! TTGTTCCTGTCATTTTTCTT+TGG + chr3_4:78463151-78463170 Msa0524920:intron 30.0%
!!! TGTTCCTGTCATTTTTCTTT+GGG + chr3_4:78463152-78463171 Msa0524920:intron 30.0%
ATAAATTTCCATAGGCTGAA+AGG - chr3_4:78463348-78463367 None:intergenic 30.0%
!! CAGATAAGACATTTTAAGAG+GGG - chr3_4:78463461-78463480 None:intergenic 30.0%
GTTAATACATTTAAGTGGCA+TGG - chr3_4:78463824-78463843 None:intergenic 30.0%
TAATCTGTAGCTCACAATAA+TGG + chr3_4:78463846-78463865 Msa0524920:intron 30.0%
! GTGTGAGCTTTTTGAATATA+AGG + chr3_4:78463957-78463976 Msa0524920:intron 30.0%
! TTTGAATATAAGGGTGTGTT+TGG + chr3_4:78463967-78463986 Msa0524920:intron 30.0%
ATGCTATTATGACATTACTG+AGG + chr3_4:78464226-78464245 Msa0524920:intron 30.0%
TTAACTTTGAATGACAAAGG+AGG + chr3_4:78464333-78464352 Msa0524920:intron 30.0%
TTGATGTTCTCAACAATGTA+AGG + chr3_4:78464806-78464825 Msa0524920:intron 30.0%
TGATGTTCTCAACAATGTAA+GGG + chr3_4:78464807-78464826 Msa0524920:intron 30.0%
!! TTATGTTTGTTGTGATTTGC+AGG + chr3_4:78464874-78464893 Msa0524920:intron 30.0%
!! AATGAAAAAGTGCTTACTGT+AGG - chr3_4:78464957-78464976 None:intergenic 30.0%
!! TCCTGTATTGATTTGTTTGT+AGG + chr3_4:78464990-78465009 Msa0524920:intron 30.0%
TCCTACAAACAAATCAATAC+AGG - chr3_4:78464994-78465013 None:intergenic 30.0%
!! GTATTGATTTGTTTGTAGGA+CGG + chr3_4:78464994-78465013 Msa0524920:intron 30.0%
CGGAATTGGAATTATAAGTT+AGG + chr3_4:78465014-78465033 Msa0524920:intron 30.0%
AATCGTGCAAAATTAGCAAA+TGG - chr3_4:78465141-78465160 None:intergenic 30.0%
ATTTGTGCTTTCCTAAAGTT+TGG + chr3_4:78465191-78465210 Msa0524920:intron 30.0%
CAGCTAAGAAAATGAGTATT+TGG - chr3_4:78465290-78465309 None:intergenic 30.0%
TTTCTTTGTACTTGAGAGTT+AGG + chr3_4:78465349-78465368 Msa0524920:intron 30.0%
!! ATCATAGTGGATATTGCTTT+GGG + chr3_4:78465656-78465675 Msa0524920:exon 30.0%
GTGTTAAACATTCTGTATGA+TGG + chr3_4:78465811-78465830 Msa0524920:three_prime_UTR 30.0%
AACAAAGTACAACACAACTA+AGG - chr3_4:78465848-78465867 None:intergenic 30.0%
!! TTTACGATCATGTTTTGAGT+TGG + chr3_4:78465868-78465887 Msa0524920:three_prime_UTR 30.0%
!!! TGTTTTGAGTTGGTATTTGA+CGG + chr3_4:78465878-78465897 Msa0524920:three_prime_UTR 30.0%
!!! TCATGTCTTTGGTGTTTTTA+CGG + chr3_4:78465979-78465998 Msa0524920:three_prime_UTR 30.0%
TTGATAGAAATGTGAGGAAA+AGG - chr3_4:78466017-78466036 None:intergenic 30.0%
AAATCATTCATGATTTCGGA+TGG + chr3_4:78466035-78466054 Msa0524920:three_prime_UTR 30.0%
!!! TTTGTTCTGAAGTGTACTTT+TGG + chr3_4:78466067-78466086 Msa0524920:three_prime_UTR 30.0%
CATCTATCACAATACTGTTC+TGG + chr3_4:78461899-78461918 Msa0524920:five_prime_UTR 35.0%
TTGTCAAGCTAAATCTGGAA+TGG + chr3_4:78462073-78462092 Msa0524920:CDS 35.0%
! TGTCAAGCTAAATCTGGAAT+GGG + chr3_4:78462074-78462093 Msa0524920:CDS 35.0%
CTAGCTTACCAGGTATTTAT+TGG + chr3_4:78462188-78462207 Msa0524920:intron 35.0%
AGCTTACCAGGTATTTATTG+GGG + chr3_4:78462190-78462209 Msa0524920:intron 35.0%
ATGGCATATCTGAAAGGAAA+AGG - chr3_4:78462277-78462296 None:intergenic 35.0%
AAACTCATGGCATATCTGAA+AGG - chr3_4:78462283-78462302 None:intergenic 35.0%
TACTAAACCTCTCAAACTCA+TGG - chr3_4:78462296-78462315 None:intergenic 35.0%
GGTCAATATCAAAGTTCACA+AGG + chr3_4:78462356-78462375 Msa0524920:CDS 35.0%
!! AAGAATACTAGCATTGGCTA+GGG + chr3_4:78462425-78462444 Msa0524920:CDS 35.0%
TGATAAGATGCTTGAATCAC+TGG + chr3_4:78462497-78462516 Msa0524920:CDS 35.0%
GATAAGATGCTTGAATCACT+GGG + chr3_4:78462498-78462517 Msa0524920:CDS 35.0%
!!! GTCTTCTCTTATTTTCCATG+TGG + chr3_4:78462565-78462584 Msa0524920:intron 35.0%
!! ATCATAACTTGCTTATCGTG+GGG - chr3_4:78462661-78462680 None:intergenic 35.0%
!! CATCATAACTTGCTTATCGT+GGG - chr3_4:78462662-78462681 None:intergenic 35.0%
!! ACATCATAACTTGCTTATCG+TGG - chr3_4:78462663-78462682 None:intergenic 35.0%
!!! TAAATTTTTTGCAGACTGGG+CGG - chr3_4:78462711-78462730 None:intergenic 35.0%
GACTTCTAATCAAGTAGTAC+TGG - chr3_4:78462756-78462775 None:intergenic 35.0%
! ATATTTGCTAGTGTTGGGTA+TGG + chr3_4:78463043-78463062 Msa0524920:intron 35.0%
! TATTTGCTAGTGTTGGGTAT+GGG + chr3_4:78463044-78463063 Msa0524920:intron 35.0%
!!! CACTTTTTCTTTGAAGAGGA+GGG + chr3_4:78463088-78463107 Msa0524920:intron 35.0%
!! ACTTTTTCTTTGAAGAGGAG+GGG + chr3_4:78463089-78463108 Msa0524920:intron 35.0%
!!! TTGGTTGGGTTGAGATATTT+TGG + chr3_4:78463126-78463145 Msa0524920:intron 35.0%
!!! TGGTTGGGTTGAGATATTTT+GGG + chr3_4:78463127-78463146 Msa0524920:intron 35.0%
GTGACAAAAAAGTTTCTGCA+AGG + chr3_4:78463206-78463225 Msa0524920:intron 35.0%
ATCCATCATTCATTTCGTTG+TGG + chr3_4:78463271-78463290 Msa0524920:CDS 35.0%
ATCCACAACGAAATGAATGA+TGG - chr3_4:78463276-78463295 None:intergenic 35.0%
! AATTTGTTCCTTTCAGCCTA+TGG + chr3_4:78463337-78463356 Msa0524920:CDS 35.0%
AATTTGATGTAGTGCTGTCA+CGG - chr3_4:78463505-78463524 None:intergenic 35.0%
GCACTACATCAAATTGAAAG+AGG + chr3_4:78463510-78463529 Msa0524920:intron 35.0%
CAAGAAGATCATTCAACTTG+CGG - chr3_4:78463546-78463565 None:intergenic 35.0%
AACAACTTGGTTGAAGTCTA+GGG - chr3_4:78463572-78463591 None:intergenic 35.0%
TAACAACTTGGTTGAAGTCT+AGG - chr3_4:78463573-78463592 None:intergenic 35.0%
!! ACATTTTTGGGGATTTTGTG+TGG + chr3_4:78463795-78463814 Msa0524920:intron 35.0%
! GTAAATTCTACACCTCCTTT+TGG - chr3_4:78463874-78463893 None:intergenic 35.0%
TAAATCTCTTAGGGTGTGTT+TGG - chr3_4:78464202-78464221 None:intergenic 35.0%
ATGACATTACTGAGGAATGA+TGG + chr3_4:78464234-78464253 Msa0524920:intron 35.0%
TATTGACAATTCTGTTGCAG+TGG + chr3_4:78464400-78464419 Msa0524920:intron 35.0%
ATTGACAATTCTGTTGCAGT+GGG + chr3_4:78464401-78464420 Msa0524920:intron 35.0%
GATTCTTGTAGCTACAGATT+TGG + chr3_4:78464530-78464549 Msa0524920:CDS 35.0%
AAATGTAATTGCAAGGCCTT+TGG - chr3_4:78464767-78464786 None:intergenic 35.0%
ATTTGTTTGTAGGACGGAAT+TGG + chr3_4:78465000-78465019 Msa0524920:intron 35.0%
CAAAGCAATATCCACTATGA+TGG - chr3_4:78465657-78465676 None:intergenic 35.0%
!! CATCATAGTGGATATTGCTT+TGG + chr3_4:78465655-78465674 Msa0524920:exon 35.0%
!! TCATAGTGGATATTGCTTTG+GGG + chr3_4:78465657-78465676 Msa0524920:exon 35.0%
GAATGTTTAACACCGATCAA+CGG - chr3_4:78465804-78465823 None:intergenic 35.0%
GTTGAAACAGAATATCGTAC+CGG + chr3_4:78465947-78465966 Msa0524920:three_prime_UTR 35.0%
AAAGACATGAGCAACAAAAC+CGG - chr3_4:78465969-78465988 None:intergenic 35.0%
!! TTTCAGATTGATTTTGCAGG+TGG + chr3_4:78466124-78466143 Msa0524920:three_prime_UTR 35.0%
TCTGGAGAACTAACATGCTT+TGG + chr3_4:78461917-78461936 Msa0524920:five_prime_UTR 40.0%
GACAAATTACATCCATTCCG+AGG - chr3_4:78462058-78462077 None:intergenic 40.0%
ACAGAACAAGTGCAGAAACT+TGG - chr3_4:78462154-78462173 None:intergenic 40.0%
AGATATGCCATGAGTTTGAG+AGG + chr3_4:78462286-78462305 Msa0524920:intron 40.0%
AAAGACAGCAACCTTCAGAT+CGG - chr3_4:78462328-78462347 None:intergenic 40.0%
! CTGAAGGTTGCTGTCTTTTA+TGG + chr3_4:78462330-78462349 Msa0524920:CDS 40.0%
! AAGGTTGCTGTCTTTTATGG+TGG + chr3_4:78462333-78462352 Msa0524920:CDS 40.0%
! AGGTTGCTGTCTTTTATGGT+GGG + chr3_4:78462334-78462353 Msa0524920:CDS 40.0%
GCGTTCCAACAACAATTTGA+GGG - chr3_4:78462401-78462420 None:intergenic 40.0%
!! GAAGAATACTAGCATTGGCT+AGG + chr3_4:78462424-78462443 Msa0524920:CDS 40.0%
GGAAAATAAGAGAAGACCAG+TGG - chr3_4:78462562-78462581 None:intergenic 40.0%
CTAAAAACCTCAGGGAATGT+GGG - chr3_4:78462793-78462812 None:intergenic 40.0%
ACTAAAAACCTCAGGGAATG+TGG - chr3_4:78462794-78462813 None:intergenic 40.0%
ATTGGAGTAGAAGATGTGGA+TGG + chr3_4:78462936-78462955 Msa0524920:intron 40.0%
TTGGAGTAGAAGATGTGGAT+GGG + chr3_4:78462937-78462956 Msa0524920:intron 40.0%
TTTAGTAATGCTCCTGACTG+TGG + chr3_4:78462963-78462982 Msa0524920:intron 40.0%
TTAGTAATGCTCCTGACTGT+GGG + chr3_4:78462964-78462983 Msa0524920:intron 40.0%
AAGTACATAATCCCACAGTC+AGG - chr3_4:78462978-78462997 None:intergenic 40.0%
!!! GGTGCACTTTTTCTTTGAAG+AGG + chr3_4:78463084-78463103 Msa0524920:intron 40.0%
!!! GCACTTTTTCTTTGAAGAGG+AGG + chr3_4:78463087-78463106 Msa0524920:intron 40.0%
TGCACCCAAAGAAAAATGAC+AGG - chr3_4:78463159-78463178 None:intergenic 40.0%
! TTGTGGATTCCATTAGCTTG+AGG + chr3_4:78463288-78463307 Msa0524920:CDS 40.0%
CCAGAGTGAATGCATATAGA+TGG - chr3_4:78463658-78463677 None:intergenic 40.0%
CCATCTATATGCATTCACTC+TGG + chr3_4:78463655-78463674 Msa0524920:CDS 40.0%
AAAATGATTCCCAGCATCTG+CGG - chr3_4:78463717-78463736 None:intergenic 40.0%
! CTCACAATAATGGTGCCAAA+AGG + chr3_4:78463856-78463875 Msa0524920:intron 40.0%
! ACAATAATGGTGCCAAAAGG+AGG + chr3_4:78463859-78463878 Msa0524920:intron 40.0%
TCTGAAAACGCTTAGACAAG+AGG - chr3_4:78463896-78463915 None:intergenic 40.0%
! ATAAGGGTGTGTTTGGATTG+AGG + chr3_4:78463974-78463993 Msa0524920:intron 40.0%
! TAAGGGTGTGTTTGGATTGA+GGG + chr3_4:78463975-78463994 Msa0524920:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG + chr3_4:78463981-78464000 Msa0524920:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG + chr3_4:78463985-78464004 Msa0524920:intron 40.0%
TTTGGATTGAGGGTTTGGAA+GGG - chr3_4:78464184-78464203 None:intergenic 40.0%
TTAGGGTGTGTTTGGATTGA+GGG - chr3_4:78464194-78464213 None:intergenic 40.0%
! CATTACTGAGGAATGATGGA+TGG + chr3_4:78464238-78464257 Msa0524920:intron 40.0%
TTGAATGACAAAGGAGGTTC+AGG + chr3_4:78464339-78464358 Msa0524920:intron 40.0%
! TGTAGGTTGAAGCGTTATAG+AGG + chr3_4:78464486-78464505 Msa0524920:intron 40.0%
! GAAGCGTTATAGAGGTTTCA+AGG + chr3_4:78464494-78464513 Msa0524920:CDS 40.0%
CGTTATAGAGGTTTCAAGGA+GGG + chr3_4:78464498-78464517 Msa0524920:CDS 40.0%
GTTATAGAGGTTTCAAGGAG+GGG + chr3_4:78464499-78464518 Msa0524920:CDS 40.0%
! CTTGTAGCTACAGATTTGGT+TGG + chr3_4:78464534-78464553 Msa0524920:CDS 40.0%
!! CTACAGATTTGGTTGGTAGA+GGG + chr3_4:78464541-78464560 Msa0524920:CDS 40.0%
AAGTAAGTGTCTGCAGAATC+AGG - chr3_4:78464609-78464628 None:intergenic 40.0%
! TTAGGGTAGTCTGACTCTTT+TGG + chr3_4:78464701-78464720 Msa0524920:intron 40.0%
!! CTTTTGGAGGGATACTTTAC+AGG + chr3_4:78464717-78464736 Msa0524920:intron 40.0%
! AAAGTGCTTACTGTAGGTAG+AGG - chr3_4:78464951-78464970 None:intergenic 40.0%
GAGACACTCAACCAAACTTT+AGG - chr3_4:78465205-78465224 None:intergenic 40.0%
AATTATGCAACTTGGTCCCT+TGG - chr3_4:78465548-78465567 None:intergenic 40.0%
!!! GATTTGTGGCGGAGATTTTT+TGG + chr3_4:78465724-78465743 Msa0524920:three_prime_UTR 40.0%
!!! TGGCGGAGATTTTTTGGAAA+AGG + chr3_4:78465730-78465749 Msa0524920:three_prime_UTR 40.0%
!!! GGCGGAGATTTTTTGGAAAA+GGG + chr3_4:78465731-78465750 Msa0524920:three_prime_UTR 40.0%
TGATTTGACCATGCTGATGT+CGG + chr3_4:78465763-78465782 Msa0524920:three_prime_UTR 40.0%
!!! TAGGCTACTTTTCCGTTGAT+CGG + chr3_4:78465789-78465808 Msa0524920:three_prime_UTR 40.0%
!!! GGTTTTGTTGCTCATGTCTT+TGG + chr3_4:78465968-78465987 Msa0524920:three_prime_UTR 40.0%
TAACGATGAGCTAAAGGAAC+TGG - chr3_4:78466176-78466195 None:intergenic 40.0%
! TCCTTTAGCTCATCGTTACA+CGG + chr3_4:78466178-78466197 Msa0524920:three_prime_UTR 40.0%
!! TTACTTACCGTTGGCTCCTT+CGG + chr3_4:78461978-78461997 Msa0524920:five_prime_UTR 45.0%
AGCAAAGAAAAAAGGCCCGA+AGG - chr3_4:78461997-78462016 None:intergenic 45.0%
TGCATACCTCAAGCAATCCT+CGG + chr3_4:78462038-78462057 Msa0524920:five_prime_UTR 45.0%
AGTCGAGAGAACAAAGACAG+CGG - chr3_4:78462105-78462124 None:intergenic 45.0%
! CACAAGAGAACTAGCTTACC+AGG + chr3_4:78462178-78462197 Msa0524920:CDS 45.0%
CCAATGCCCCAATAAATACC+TGG - chr3_4:78462199-78462218 None:intergenic 45.0%
CCAGGTATTTATTGGGGCAT+TGG + chr3_4:78462196-78462215 Msa0524920:intron 45.0%
TACCTACTTACCCGATCTGA+AGG + chr3_4:78462314-78462333 Msa0524920:CDS 45.0%
AACCTTCAGATCGGGTAAGT+AGG - chr3_4:78462319-78462338 None:intergenic 45.0%
AAGACAGCAACCTTCAGATC+GGG - chr3_4:78462327-78462346 None:intergenic 45.0%
! GGTTGCTGTCTTTTATGGTG+GGG + chr3_4:78462335-78462354 Msa0524920:CDS 45.0%
GAGTGCCCTCAAATTGTTGT+TGG + chr3_4:78462393-78462412 Msa0524920:CDS 45.0%
GGCGTTCCAACAACAATTTG+AGG - chr3_4:78462402-78462421 None:intergenic 45.0%
! CAAATTGTTGTTGGAACGCC+TGG + chr3_4:78462402-78462421 Msa0524920:CDS 45.0%
GCCTGGAAGAATACTAGCAT+TGG + chr3_4:78462419-78462438 Msa0524920:CDS 45.0%
GCCAATGCTAGTATTCTTCC+AGG - chr3_4:78462423-78462442 None:intergenic 45.0%
! GTTTTCAGCAACACTCAGCA+AGG + chr3_4:78462681-78462700 Msa0524920:CDS 45.0%
TTAACAACCTGCTGGTGAGT+TGG + chr3_4:78462896-78462915 Msa0524920:intron 45.0%
! CTGGATTGGAGTAGAAGATG+TGG + chr3_4:78462932-78462951 Msa0524920:intron 45.0%
CCAGCATGAACAACAAGAGA+CGG - chr3_4:78463005-78463024 None:intergenic 45.0%
!! CGTCTCTTGTTGTTCATGCT+GGG + chr3_4:78463003-78463022 Msa0524920:intron 45.0%
AAACACGTGGACAAGAACTG+TGG + chr3_4:78463234-78463253 Msa0524920:CDS 45.0%
TGGACAAGAACTGTGGTTCA+AGG + chr3_4:78463241-78463260 Msa0524920:CDS 45.0%
GGACAAGAACTGTGGTTCAA+GGG + chr3_4:78463242-78463261 Msa0524920:CDS 45.0%
! GGATTCCATTAGCTTGAGGA+CGG + chr3_4:78463292-78463311 Msa0524920:CDS 45.0%
GAAGCCAAGTTAACCCTTCA+TGG + chr3_4:78463377-78463396 Msa0524920:CDS 45.0%
CAGTCCATGAAGGGTTAACT+TGG - chr3_4:78463384-78463403 None:intergenic 45.0%
CAAGTTAACCCTTCATGGAC+TGG + chr3_4:78463382-78463401 Msa0524920:CDS 45.0%
GTTTGGATTGAGGGTTTAGG+AGG + chr3_4:78463984-78464003 Msa0524920:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG + chr3_4:78463986-78464005 Msa0524920:intron 45.0%
TTGGATTGAGGGTTTGGAAG+GGG - chr3_4:78464183-78464202 None:intergenic 45.0%
GTTTGGATTGAGGGTTTGGA+AGG - chr3_4:78464185-78464204 None:intergenic 45.0%
GTGTGTTTGGATTGAGGGTT+TGG - chr3_4:78463980-78463999 None:intergenic 45.0%
CTTAGGGTGTGTTTGGATTG+AGG - chr3_4:78464195-78464214 None:intergenic 45.0%
GGAGGTTCAGGAAACAAATG+CGG + chr3_4:78464351-78464370 Msa0524920:intron 45.0%
GCGTTATAGAGGTTTCAAGG+AGG + chr3_4:78464497-78464516 Msa0524920:CDS 45.0%
!! GCTACAGATTTGGTTGGTAG+AGG + chr3_4:78464540-78464559 Msa0524920:CDS 45.0%
TGCAGACACTTACTTGCACA+GGG + chr3_4:78464614-78464633 Msa0524920:CDS 45.0%
! GGTAGTCTGACTCTTTTGGA+GGG + chr3_4:78464705-78464724 Msa0524920:intron 45.0%
TGGAGGGATACTTTACAGGT+TGG + chr3_4:78464721-78464740 Msa0524920:intron 45.0%
TGGTTCCAAATCTTCCAGCT+CGG - chr3_4:78464747-78464766 None:intergenic 45.0%
! GCTGGAAGATTTGGAACCAA+AGG + chr3_4:78464748-78464767 Msa0524920:CDS 45.0%
! GTGATTTGCAGGTTCAGTCA+AGG + chr3_4:78464885-78464904 Msa0524920:intron 45.0%
!! GTAGAGGTATCAATCTGCTC+AGG - chr3_4:78464935-78464954 None:intergenic 45.0%
CTTGGATATTCTTGCCTCTC+GGG - chr3_4:78465530-78465549 None:intergenic 45.0%
CCTTGGATATTCTTGCCTCT+CGG - chr3_4:78465531-78465550 None:intergenic 45.0%
CGAGAGGCAAGAATATCCAA+GGG + chr3_4:78465529-78465548 Msa0524920:intron 45.0%
!! TATTGCTTTGGGGCAACACT+TGG + chr3_4:78465667-78465686 Msa0524920:three_prime_UTR 45.0%
GTATGAGTACCCTCATCTAC+TGG + chr3_4:78465702-78465721 Msa0524920:three_prime_UTR 45.0%
ACCCTCATCTACTGGATTTG+TGG + chr3_4:78465710-78465729 Msa0524920:three_prime_UTR 45.0%
GCCACAAATCCAGTAGATGA+GGG - chr3_4:78465714-78465733 None:intergenic 45.0%
CTCATCTACTGGATTTGTGG+CGG + chr3_4:78465713-78465732 Msa0524920:three_prime_UTR 45.0%
GATTTGACCATGCTGATGTC+GGG + chr3_4:78465764-78465783 Msa0524920:three_prime_UTR 45.0%
GATCAACGGAAAAGTAGCCT+AGG - chr3_4:78465790-78465809 None:intergenic 45.0%
ACTGGTAGCATAGACATGGA+AGG - chr3_4:78466158-78466177 None:intergenic 45.0%
AGGAACTGGTAGCATAGACA+TGG - chr3_4:78466162-78466181 None:intergenic 45.0%
TCCGTGTAACGATGAGCTAA+AGG - chr3_4:78466182-78466201 None:intergenic 45.0%
!! AAATCATAAATATAAAAATT+AGG - chr3_4:78465238-78465257 None:intergenic 5.0%
!! TACTTACCGTTGGCTCCTTC+GGG + chr3_4:78461979-78461998 Msa0524920:five_prime_UTR 50.0%
ACCTCAAGCAATCCTCGGAA+TGG + chr3_4:78462043-78462062 Msa0524920:exon 50.0%
TCCATTCCGAGGATTGCTTG+AGG - chr3_4:78462047-78462066 None:intergenic 50.0%
CAGCAGATTGATCCTGTTCC+AGG + chr3_4:78462128-78462147 Msa0524920:CDS 50.0%
ACAAGTGCAGAAACTTGGCC+TGG - chr3_4:78462149-78462168 None:intergenic 50.0%
CATACTTCCCACATTCCCTG+AGG + chr3_4:78462783-78462802 Msa0524920:intron 50.0%
!! CCGTCTCTTGTTGTTCATGC+TGG + chr3_4:78463002-78463021 Msa0524920:intron 50.0%
GTGCAAGTATCCAATGTCCG+TGG + chr3_4:78463174-78463193 Msa0524920:intron 50.0%
TTTGTCACCGACAAGTGCCA+CGG - chr3_4:78463194-78463213 None:intergenic 50.0%
CTGCAAGGAGACAAAACACG+TGG + chr3_4:78463221-78463240 Msa0524920:CDS 50.0%
TACCTGCACCAGTCCATGAA+GGG - chr3_4:78463393-78463412 None:intergenic 50.0%
TCACGGCAGACAAGAAGGTA+AGG - chr3_4:78463488-78463507 None:intergenic 50.0%
TGTTAGTAGAGCAGCTGAGC+TGG + chr3_4:78463606-78463625 Msa0524920:CDS 50.0%
CTGGCATGTCCCAAGAAGAA+AGG + chr3_4:78463674-78463693 Msa0524920:CDS 50.0%
TATGAGATGTCCGCAGATGC+TGG + chr3_4:78463704-78463723 Msa0524920:intron 50.0%
ATGAGATGTCCGCAGATGCT+GGG + chr3_4:78463705-78463724 Msa0524920:intron 50.0%
ATTGAGGGTTTAGGAGGGGA+GGG + chr3_4:78463990-78464009 Msa0524920:intron 50.0%
TTGAGGGTTTGGAAGGGGAA+GGG - chr3_4:78464178-78464197 None:intergenic 50.0%
ATTGAGGGTTTGGAAGGGGA+AGG - chr3_4:78464179-78464198 None:intergenic 50.0%
! GTTTCAAGGAGGGGCATACT+AGG + chr3_4:78464508-78464527 Msa0524920:CDS 50.0%
CTGCAGACACTTACTTGCAC+AGG + chr3_4:78464613-78464632 Msa0524920:CDS 50.0%
! GGGTAGTCTGACTCTTTTGG+AGG + chr3_4:78464704-78464723 Msa0524920:intron 50.0%
ACGAGAAAATCTGACCCGAG+AGG + chr3_4:78465513-78465532 Msa0524920:intron 50.0%
CCGAGAGGCAAGAATATCCA+AGG + chr3_4:78465528-78465547 Msa0524920:intron 50.0%
CACTATGATGGCACTGCACA+TGG - chr3_4:78465645-78465664 None:intergenic 50.0%
CATGTGCAGTGCCATCATAG+TGG + chr3_4:78465643-78465662 Msa0524920:intron 50.0%
CAACACTTGGTCCGTTTGGA+CGG + chr3_4:78465680-78465699 Msa0524920:three_prime_UTR 50.0%
GGGTACTCATACCGTCCAAA+CGG - chr3_4:78465694-78465713 None:intergenic 50.0%
CGCCACAAATCCAGTAGATG+AGG - chr3_4:78465715-78465734 None:intergenic 50.0%
CGGTGATGCTGTTGTTGAAC+TGG + chr3_4:78465898-78465917 Msa0524920:three_prime_UTR 50.0%
AAAAGGCCCGAAGGAGCCAA+CGG - chr3_4:78461988-78462007 None:intergenic 55.0%
GCAGAAACTTGGCCTGGAAC+AGG - chr3_4:78462143-78462162 None:intergenic 55.0%
! AACCTGCTGGTGAGTTGGAG+TGG + chr3_4:78462901-78462920 Msa0524920:intron 55.0%
! ACCTGCTGGTGAGTTGGAGT+GGG + chr3_4:78462902-78462921 Msa0524920:intron 55.0%
! TTGAAGAGGAGGGGTGTGTG+TGG + chr3_4:78463098-78463117 Msa0524920:intron 55.0%
! TGAAGAGGAGGGGTGTGTGT+GGG + chr3_4:78463099-78463118 Msa0524920:intron 55.0%
!! TGTGTGTGGGTGGGTTGGTT+GGG + chr3_4:78463112-78463131 Msa0524920:intron 55.0%
CCAATGTCCGTGGCACTTGT+CGG + chr3_4:78463184-78463203 Msa0524920:intron 55.0%
AGGGTCCGTCCTCAAGCTAA+TGG - chr3_4:78463300-78463319 None:intergenic 55.0%
!! AACCCTTCATGGACTGGTGC+AGG + chr3_4:78463388-78463407 Msa0524920:CDS 55.0%
CTACCTGCACCAGTCCATGA+AGG - chr3_4:78463394-78463413 None:intergenic 55.0%
!! CTTCATGGACTGGTGCAGGT+AGG + chr3_4:78463392-78463411 Msa0524920:intron 55.0%
TGCTGTCACGGCAGACAAGA+AGG - chr3_4:78463493-78463512 None:intergenic 55.0%
GATTGAGGGTTTAGGAGGGG+AGG + chr3_4:78463989-78464008 Msa0524920:intron 55.0%
CAGGAAACAAATGCGGCTGC+TGG + chr3_4:78464358-78464377 Msa0524920:intron 55.0%
! ACTTTACAGGTTGGCCGAGC+TGG + chr3_4:78464730-78464749 Msa0524920:intron 55.0%
GTTGGCCGAGCTGGAAGATT+TGG + chr3_4:78464739-78464758 Msa0524920:CDS 55.0%
! CCTGCTGGTGAGTTGGAGTG+GGG + chr3_4:78462903-78462922 Msa0524920:intron 60.0%
! CTGGTGAGTTGGAGTGGGGT+TGG + chr3_4:78462907-78462926 Msa0524920:intron 60.0%
! AGTTGGAGTGGGGTTGGCAC+TGG + chr3_4:78462913-78462932 Msa0524920:intron 60.0%
! GAGTGGGGTTGGCACTGGAT+TGG + chr3_4:78462918-78462937 Msa0524920:intron 60.0%
!! GTGTGTGTGGGTGGGTTGGT+TGG + chr3_4:78463111-78463130 Msa0524920:intron 60.0%
CCGACAAGTGCCACGGACAT+TGG - chr3_4:78463187-78463206 None:intergenic 60.0%
GGTTTGGAAGGGGAAGGGAG+GGG - chr3_4:78464173-78464192 None:intergenic 60.0%
GGGTTTGGAAGGGGAAGGGA+GGG - chr3_4:78464174-78464193 None:intergenic 60.0%
AGGGTTTGGAAGGGGAAGGG+AGG - chr3_4:78464175-78464194 None:intergenic 60.0%
GGGGCAACACTTGGTCCGTT+TGG + chr3_4:78465676-78465695 Msa0524920:three_prime_UTR 60.0%
ACCATGCTGATGTCGGGCCT+AGG + chr3_4:78465770-78465789 Msa0524920:three_prime_UTR 60.0%
CCCCACTCCAACTCACCAGC+AGG - chr3_4:78462906-78462925 None:intergenic 65.0%
! AGAGGAGGGGTGTGTGTGGG+TGG + chr3_4:78463102-78463121 Msa0524920:intron 65.0%
! GAGGAGGGGTGTGTGTGGGT+GGG + chr3_4:78463103-78463122 Msa0524920:intron 65.0%
! AGGGGTGTGTGTGGGTGGGT+TGG + chr3_4:78463107-78463126 Msa0524920:intron 65.0%
TGGAAGGGGAAGGGAGGGGA+GGG - chr3_4:78464169-78464188 None:intergenic 65.0%
TTGGAAGGGGAAGGGAGGGG+AGG - chr3_4:78464170-78464189 None:intergenic 65.0%
GCCTAGGCCCGACATCAGCA+TGG - chr3_4:78465774-78465793 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 78461877 78466232 78461877 ID=Msa0524920;Name=Msa0524920
chr3_4 mRNA 78461877 78466232 78461877 ID=Msa0524920-mRNA-1;Parent=Msa0524920;Name=Msa0524920-mRNA-1;_AED=0.08;_eAED=0.08;_QI=185|0.87|0.88|1|0.75|0.66|9|570|389
chr3_4 exon 78461877 78462199 78461877 ID=Msa0524920-mRNA-1:exon:23236;Parent=Msa0524920-mRNA-1
chr3_4 exon 78462288 78462519 78462288 ID=Msa0524920-mRNA-1:exon:23237;Parent=Msa0524920-mRNA-1
chr3_4 exon 78462620 78462738 78462620 ID=Msa0524920-mRNA-1:exon:23238;Parent=Msa0524920-mRNA-1
chr3_4 exon 78463218 78463409 78463218 ID=Msa0524920-mRNA-1:exon:23239;Parent=Msa0524920-mRNA-1
chr3_4 exon 78463511 78463695 78463511 ID=Msa0524920-mRNA-1:exon:23240;Parent=Msa0524920-mRNA-1
chr3_4 exon 78464491 78464635 78464491 ID=Msa0524920-mRNA-1:exon:23241;Parent=Msa0524920-mRNA-1
chr3_4 exon 78464739 78464822 78464739 ID=Msa0524920-mRNA-1:exon:23242;Parent=Msa0524920-mRNA-1
chr3_4 exon 78464896 78464959 78464896 ID=Msa0524920-mRNA-1:exon:23243;Parent=Msa0524920-mRNA-1
chr3_4 exon 78465652 78466232 78465652 ID=Msa0524920-mRNA-1:exon:23244;Parent=Msa0524920-mRNA-1
chr3_4 five_prime_UTR 78461877 78462061 78461877 ID=Msa0524920-mRNA-1:five_prime_utr;Parent=Msa0524920-mRNA-1
chr3_4 CDS 78462062 78462199 78462062 ID=Msa0524920-mRNA-1:cds;Parent=Msa0524920-mRNA-1
chr3_4 CDS 78462288 78462519 78462288 ID=Msa0524920-mRNA-1:cds;Parent=Msa0524920-mRNA-1
chr3_4 CDS 78462620 78462738 78462620 ID=Msa0524920-mRNA-1:cds;Parent=Msa0524920-mRNA-1
chr3_4 CDS 78463218 78463409 78463218 ID=Msa0524920-mRNA-1:cds;Parent=Msa0524920-mRNA-1
chr3_4 CDS 78463511 78463695 78463511 ID=Msa0524920-mRNA-1:cds;Parent=Msa0524920-mRNA-1
chr3_4 CDS 78464491 78464635 78464491 ID=Msa0524920-mRNA-1:cds;Parent=Msa0524920-mRNA-1
chr3_4 CDS 78464739 78464822 78464739 ID=Msa0524920-mRNA-1:cds;Parent=Msa0524920-mRNA-1
chr3_4 CDS 78464896 78464959 78464896 ID=Msa0524920-mRNA-1:cds;Parent=Msa0524920-mRNA-1
chr3_4 CDS 78465652 78465662 78465652 ID=Msa0524920-mRNA-1:cds;Parent=Msa0524920-mRNA-1
chr3_4 three_prime_UTR 78465663 78466232 78465663 ID=Msa0524920-mRNA-1:three_prime_utr;Parent=Msa0524920-mRNA-1
Gene Sequence

>Msa0524920

ATGGATGTAATTTGTCAAGCTAAATCTGGAATGGGAAAGACCGCTGTCTTTGTTCTCTCGACTTTGCAGCAGATTGATCCTGTTCCAGGCCAAGTTTCTGCACTTGTTCTGTGTCACACAAGAGAACTAGCTTACCAGATATGCCATGAGTTTGAGAGGTTTAGTACCTACTTACCCGATCTGAAGGTTGCTGTCTTTTATGGTGGGGTCAATATCAAAGTTCACAAGGATCTATTGAAAAATGAGTGCCCTCAAATTGTTGTTGGAACGCCTGGAAGAATACTAGCATTGGCTAGGGAGAAGAATCTTTCATTGAAGAATGTTCGTCATTTCGTTTTAGATGAGTGTGATAAGATGCTTGAATCACTGGACATGAGGAAAGACGTTCAAGACATTTTCAAGTTGACTCCCCACGATAAGCAAGTTATGATGTTTTCAGCAACACTCAGCAAGGAAATCCGCCCAGTCTGCAAAAAATTTATGCAAGATTTTCTGCAAGGAGACAAAACACGTGGACAAGAACTGTGGTTCAAGGGATCTGCATCCATCATTCATTTCGTTGTGGATTCCATTAGCTTGAGGACGGACCCTAACATGATTTACTGTCAAATTTGTTCCTTTCAGCCTATGGAAATTTATGTTGATGATGAAGCCAAGTTAACCCTTCATGGACTGGTGCAGCACTACATCAAATTGAAAGAGGAAGAGAAAAACCGCAAGTTGAATGATCTTCTTGATGCCCTAGACTTCAACCAAGTTGTTATCTTTGTGAAAAGTGTTAGTAGAGCAGCTGAGCTGGACAGACTACTTATAGAGTGCAATTTTCCATCTATATGCATTCACTCTGGCATGTCCCAAGAAGAAAGGTTGAAGCGTTATAGAGGTTTCAAGGAGGGGCATACTAGGATTCTTGTAGCTACAGATTTGGTTGGTAGAGGGATTGACATTGAACGTGTCAATATTGTTATAAACTATGACATGCCTGATTCTGCAGACACTTACTTGCACAGGGTTGGCCGAGCTGGAAGATTTGGAACCAAAGGCCTTGCAATTACATTTGTTTCATGTTCTTCTGATGTTGATGTTCTCAACAATGTTCAGTCAAGGTTCGAAATAGATATAAAGCAGCTTCCTGAGCAGATTGATACCTCTACCTACATGCCATCATAG
Protein sequence

>Msa0524920

MDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPQIVVGTPGRILALAREKNLSLKNVRHFVLDECDKMLESLDMRKDVQDIFKLTPHDKQVMMFSATLSKEIRPVCKKFMQDFLQGDKTRGQELWFKGSASIIHFVVDSISLRTDPNMIYCQICSFQPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSSDVDVLNNVQSRFEIDIKQLPEQIDTSTYMPS*