AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1433390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433390 MtrunA17_Chr1g0210241 98.347 242 4 0 11 252 35 276 4.29e-162 450
Msa1433390 MtrunA17_Chr2g0278661 40.000 110 63 1 11 117 35 144 1.64e-17 79.3
Msa1433390 MtrunA17_Chr4g0050781 36.364 99 63 0 11 109 35 133 5.89e-16 74.3
Msa1433390 MtrunA17_Chr4g0035031 49.020 51 26 0 11 61 36 86 8.30e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1433390 AT1G60650.2 50.943 265 95 7 11 252 40 292 1.40e-64 203
Msa1433390 AT1G60650.1 50.943 265 95 7 11 252 40 292 1.40e-64 203
Msa1433390 AT1G60650.3 51.527 262 92 7 14 252 6 255 2.40e-64 201
Msa1433390 AT1G60650.4 51.341 261 92 7 15 252 1 249 2.89e-63 198
Msa1433390 AT5G04280.1 49.650 286 90 13 11 252 35 310 1.02e-54 178
Msa1433390 AT5G04280.3 50.000 282 87 13 15 252 1 272 2.29e-53 174
Msa1433390 AT5G04280.4 50.000 282 87 13 15 252 1 272 2.29e-53 174
Msa1433390 AT5G04280.5 50.000 282 87 13 15 252 1 272 2.29e-53 174
Msa1433390 AT5G04280.2 50.000 282 87 13 15 252 1 272 2.29e-53 174
Msa1433390 AT3G26420.1 36.820 239 108 10 11 240 35 239 1.84e-22 92.8
Msa1433390 AT4G39260.3 51.923 52 25 0 11 62 34 85 1.82e-13 65.1
Msa1433390 AT4G39260.1 52.000 50 24 0 11 60 34 83 7.91e-12 62.4

Find 227 sgRNAs with CRISPR-Local

Find 891 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAGTAAATTTGGAAATTT+AGG 0.046734 tig0027301:-20590 None:intergenic
TGCAATTGAACATGGCTTTA+TGG 0.194388 tig0027301:+25153 Msa1433390:three_prime_UTR
TATAATTTGGAAGGAATATT+TGG 0.196318 tig0027301:+21624 Msa1433390:five_prime_UTR
GAGATAATTGTTGTCAAATA+TGG 0.215817 tig0027301:+22888 Msa1433390:five_prime_UTR
TGTGATACTTGTCATAAAAT+TGG 0.245413 tig0027301:+22586 Msa1433390:five_prime_UTR
AATTTCAACTTGTTCCATTC+TGG 0.251499 tig0027301:-22834 None:intergenic
ACAGGACGACCACGTGGATT+TGG 0.274620 tig0027301:+23748 Msa1433390:CDS
GGTTGAGATATGTTGAATTC+AGG 0.274960 tig0027301:+21520 Msa1433390:five_prime_UTR
CCATAGCAGATGGGTATTAA+TGG 0.275812 tig0027301:+21842 Msa1433390:five_prime_UTR
ATTTGTTGGTGGATTGGGTT+GGG 0.282263 tig0027301:+20750 Msa1433390:five_prime_UTR
AACATTAGGGACGTAGTTAT+TGG 0.285692 tig0027301:+24979 Msa1433390:three_prime_UTR
AGAGTAAATTTGGAAATTTA+GGG 0.299719 tig0027301:-20589 None:intergenic
CGTTATGACGGAGGACGTTA+TGG 0.301748 tig0027301:+24123 Msa1433390:CDS
GTTTATTTGTGGCTGCAATT+TGG 0.307072 tig0027301:+22678 Msa1433390:five_prime_UTR
AGGTGATGGTGGTCGTGGTC+GGG 0.309380 tig0027301:+24026 Msa1433390:CDS
GAAATGGATGGACGGGAAAT+TGG 0.316691 tig0027301:+23817 Msa1433390:CDS
GGCAATTGCTGCTTAGATAG+TGG 0.316895 tig0027301:+22023 Msa1433390:five_prime_UTR
GATACTAAGATTATATTTGT+TGG 0.317430 tig0027301:+22775 Msa1433390:five_prime_UTR
ACAAATAAACAGCATATATA+AGG 0.323134 tig0027301:-22665 None:intergenic
GGAATATTTGGCAGTAAGAT+TGG 0.323150 tig0027301:+21636 Msa1433390:five_prime_UTR
GTGATGAAGGAAGGAGTTAT+AGG 0.324717 tig0027301:+24839 Msa1433390:CDS
TAGCTGTATGAAAACTATTC+TGG 0.330089 tig0027301:+22933 Msa1433390:exon
AATGTGGGCGTCCAGGGCAC+TGG 0.342548 tig0027301:+23980 Msa1433390:CDS
GACTACCCGCAAAATGGTTA+TGG 0.347078 tig0027301:+24742 Msa1433390:CDS
TGCCTATGATCCCAATGCTT+TGG 0.348772 tig0027301:-22004 None:intergenic
GAAGCTATGGGGCTGGAGAT+AGG 0.348816 tig0027301:+23935 Msa1433390:CDS
TGATGAAGGAAGGAGTTATA+GGG 0.349786 tig0027301:+24840 Msa1433390:CDS
AAGTAACGACAGTCAGAAAT+AGG 0.350348 tig0027301:+20502 Msa1433390:five_prime_UTR
TCGAATATTTGTTGGTGGAT+TGG 0.355149 tig0027301:+20744 Msa1433390:five_prime_UTR
TTATATATGCTGTTTATTTG+TGG 0.356341 tig0027301:+22667 Msa1433390:five_prime_UTR
CAGGACGACCACGTGGATTT+GGG 0.358578 tig0027301:+23749 Msa1433390:CDS
TATTGCATTTGCAGATTGTC+AGG 0.361301 tig0027301:+13047 None:intergenic
TCAGAATAGTATTGATTAGT+TGG 0.362454 tig0027301:+22151 Msa1433390:five_prime_UTR
GGTGATGGTGGTCGTGGTCG+GGG 0.363476 tig0027301:+24027 Msa1433390:CDS
AGAAATAGGAGCGTTAGTTT+TGG 0.366217 tig0027301:+20516 Msa1433390:five_prime_UTR
GAGGTGATGGTGGTCGTGGT+CGG 0.367565 tig0027301:+24025 Msa1433390:CDS
CGAATATTTGTTGGTGGATT+GGG 0.369450 tig0027301:+20745 Msa1433390:five_prime_UTR
TCGAAATTGGAAGCAATGTC+TGG 0.373900 tig0027301:+20709 Msa1433390:five_prime_UTR
GGTTGCAGAAAGTACATAAA+AGG 0.375750 tig0027301:-21895 None:intergenic
AAAGACAACACGCAAGTTAC+AGG 0.376730 tig0027301:-22502 None:intergenic
TCTAACGCAGGAGCAACATT+AGG 0.379230 tig0027301:+24965 Msa1433390:three_prime_UTR
GTCCTTATGACCGCCCAAGC+AGG 0.381666 tig0027301:+24872 Msa1433390:CDS
GGCTCAGACTACCCGCAAAA+TGG 0.386349 tig0027301:+24736 Msa1433390:CDS
TATTGTTTAAATTTATATCA+TGG 0.386442 tig0027301:+22802 Msa1433390:five_prime_UTR
AGTAAGATTGGGCTGAAAAC+TGG 0.387817 tig0027301:+21648 Msa1433390:five_prime_UTR
CAATCTCGGGCCCAGTGCCC+TGG 0.390225 tig0027301:-23991 None:intergenic
ACTTCAAAATTAGCTATAAT+AGG 0.390937 tig0027301:-22091 None:intergenic
GCCCTGCTTGGGCGGTCATA+AGG 0.391874 tig0027301:-24874 None:intergenic
GGTGGTCGTGGTCGGGGTGG+TGG 0.397614 tig0027301:+24033 Msa1433390:CDS
GTTGAGATATGTTGAATTCA+GGG 0.399500 tig0027301:+21521 Msa1433390:five_prime_UTR
ATTGTTGTCAAATATGGGCT+TGG 0.399579 tig0027301:+22894 Msa1433390:five_prime_UTR
CCCTTGTTGAGGTTGAAGCT+TGG 0.409687 tig0027301:-20554 None:intergenic
TCTGATAAAATAGTAGTTTG+TGG 0.409940 tig0027301:+21466 Msa1433390:five_prime_UTR
AGATAATTGTTGTCAAATAT+GGG 0.412690 tig0027301:+22889 Msa1433390:five_prime_UTR
GAAGAAAATCGAATATTTGT+TGG 0.413061 tig0027301:+20736 Msa1433390:five_prime_UTR
CATGTTCAATTGCATTTGAA+AGG 0.414208 tig0027301:-25144 None:intergenic
CAGGAAAGAATACTTCAATA+TGG 0.416398 tig0027301:-21683 None:intergenic
TGCAAATTATAATCAATCTT+AGG 0.419300 tig0027301:-22384 None:intergenic
GGAGGATGCAATCAAAGAAA+TGG 0.419502 tig0027301:+23801 Msa1433390:CDS
TGGATTGGGTTGGGATGTTA+CGG 0.424965 tig0027301:+20759 Msa1433390:five_prime_UTR
TTGTTGTCAAATATGGGCTT+GGG 0.427812 tig0027301:+22895 Msa1433390:five_prime_UTR
GTTATGACGGAGGACGTTAT+GGG 0.429311 tig0027301:+24124 Msa1433390:CDS
TCAATTCAACAAACAAATAC+AGG 0.430928 tig0027301:-21702 None:intergenic
TGTTTCAAATGTGGGCGTCC+AGG 0.430957 tig0027301:+23973 Msa1433390:CDS
ATCCAAAGCATTGGGATCAT+AGG 0.431807 tig0027301:+22002 Msa1433390:five_prime_UTR
ACGGAGGACGTTATGGGGAT+AGG 0.436200 tig0027301:+24130 Msa1433390:CDS
AAAATAGTAGTTTGTGGTAA+AGG 0.440863 tig0027301:+21472 Msa1433390:five_prime_UTR
TTGCTAGTATTCTCCTCCCC+AGG 0.441904 tig0027301:-22407 None:intergenic
ATCATGATGGAAAGGGATAC+AGG 0.443231 tig0027301:+23730 Msa1433390:CDS
GGTGGACGAGCAGCCCTGCT+TGG 0.446845 tig0027301:-24886 None:intergenic
CTTTCAAATGCAATTGAACA+TGG 0.446952 tig0027301:+25145 Msa1433390:three_prime_UTR
CTCCACGCGCACCACCGTTT+CGG 0.447388 tig0027301:-24783 None:intergenic
CGTGGAGGTGCTGATAGATA+TGG 0.447438 tig0027301:+24799 Msa1433390:CDS
CCATTAATACCCATCTGCTA+TGG 0.448776 tig0027301:-21842 None:intergenic
CGGGTGGTAGGGGAAGCTAT+GGG 0.448997 tig0027301:+23923 Msa1433390:CDS
TTGGTCATACACACCTGCTA+TGG 0.449305 tig0027301:-21917 None:intergenic
GTGGACGAGCAGCCCTGCTT+GGG 0.450077 tig0027301:-24885 None:intergenic
GCCCGAGATTGTCCTTTGGC+AGG 0.452013 tig0027301:+24003 Msa1433390:CDS
GTGTTCACCAAGTCAGTTAA+GGG 0.454214 tig0027301:+22274 Msa1433390:five_prime_UTR
GAATATTTGGCAGTAAGATT+GGG 0.455635 tig0027301:+21637 Msa1433390:five_prime_UTR
TCGGGTGGTAGGGGAAGCTA+TGG 0.455756 tig0027301:+23922 Msa1433390:CDS
GGAGCTGCAACATAGTGGTT+TGG 0.456111 tig0027301:+22607 Msa1433390:five_prime_UTR
CGGAGGACGTTATGGGGATA+GGG 0.457724 tig0027301:+24131 Msa1433390:CDS
CTGGGCCCGAGATTGTCCTT+TGG 0.458404 tig0027301:+23999 Msa1433390:CDS
CTGCCACCCCTTAACTGACT+TGG 0.458505 tig0027301:-22281 None:intergenic
GGTGTTCACCAAGTCAGTTA+AGG 0.464814 tig0027301:+22273 Msa1433390:five_prime_UTR
TCCTGCCAAAGGACAATCTC+GGG 0.464866 tig0027301:-24004 None:intergenic
CGATCTGCAAGTGATCGATA+TGG 0.465592 tig0027301:+24709 Msa1433390:CDS
GCTCAAGGTGGAGATTAGTA+TGG 0.466638 tig0027301:+21499 Msa1433390:five_prime_UTR
AACAAGGCACAGCCCAGGAT+GGG 0.467319 tig0027301:+23859 Msa1433390:CDS
GATGGTGGTCGTGGTCGGGG+TGG 0.472270 tig0027301:+24030 Msa1433390:CDS
TCTTCACGTCCTAGGTTTGG+AGG 0.474346 tig0027301:+24063 Msa1433390:CDS
ACTACCCGCAAAATGGTTAT+GGG 0.476598 tig0027301:+24743 Msa1433390:CDS
AAGCTATGGGGCTGGAGATA+GGG 0.478531 tig0027301:+23936 Msa1433390:CDS
TGTCCTTTGGCAGGAGGTGA+TGG 0.487069 tig0027301:+24012 Msa1433390:CDS
GGGTGGTAGGGGAAGCTATG+GGG 0.488887 tig0027301:+23924 Msa1433390:CDS
TACTAATGAACCTTGTCTCT+CGG 0.493189 tig0027301:-21592 None:intergenic
ATGTGGGCGTCCAGGGCACT+GGG 0.494969 tig0027301:+23981 Msa1433390:CDS
GAAAATCGAATATTTGTTGG+TGG 0.498286 tig0027301:+20739 Msa1433390:five_prime_UTR
TACATAAAAGGCGGAAGCAA+AGG 0.498753 tig0027301:-21883 None:intergenic
GGCTGGAGATAGGGTAGGAC+AGG 0.498804 tig0027301:+23945 Msa1433390:CDS
ACAAGGCACAGCCCAGGATG+GGG 0.498851 tig0027301:+23860 Msa1433390:CDS
CTAACGCAGGAGCAACATTA+GGG 0.500880 tig0027301:+24966 Msa1433390:three_prime_UTR
TATTTGTTGGTGGATTGGGT+TGG 0.502918 tig0027301:+20749 Msa1433390:five_prime_UTR
CTTCACGTCCTAGGTTTGGA+GGG 0.505875 tig0027301:+24064 Msa1433390:CDS
TCCTTATGACCGCCCAAGCA+GGG 0.508519 tig0027301:+24873 Msa1433390:CDS
GACGTAGTTATTGGTTATGT+AGG 0.509664 tig0027301:+24988 Msa1433390:three_prime_UTR
GATTGATTATAATTTGCACC+TGG 0.513544 tig0027301:+22389 Msa1433390:five_prime_UTR
CGGCAAAATTCTCGAATGCC+AGG 0.513653 tig0027301:+20813 Msa1433390:five_prime_UTR
TACTTTCTGCAACCCATAGC+AGG 0.515890 tig0027301:+21904 Msa1433390:five_prime_UTR
GTTTCAAATGTGGGCGTCCA+GGG 0.516565 tig0027301:+23974 Msa1433390:CDS
GACCGAAACGGTGGTGCGCG+TGG 0.518819 tig0027301:+24781 Msa1433390:CDS
CAAGGCACAGCCCAGGATGG+GGG 0.520072 tig0027301:+23861 Msa1433390:CDS
GGAATGCCAGCTCGTGATGA+AGG 0.520759 tig0027301:+24826 Msa1433390:CDS
TAGGACCTGTCAGTGGTGTA+TGG 0.520994 tig0027301:-21943 None:intergenic
GACGAGCAGCCCTGCTTGGG+CGG 0.521128 tig0027301:-24882 None:intergenic
GCAATTGCTGCTTAGATAGT+GGG 0.521545 tig0027301:+22024 Msa1433390:five_prime_UTR
TCCTGTAGATCATGATGGAA+AGG 0.523083 tig0027301:+23722 Msa1433390:intron
CAACAAGGCACAGCCCAGGA+TGG 0.523273 tig0027301:+23858 Msa1433390:CDS
AACAGATTTACTAATAGAAG+TGG 0.524339 tig0027301:-21760 None:intergenic
CCTGTAGATCATGATGGAAA+GGG 0.526313 tig0027301:+23723 Msa1433390:intron
CGAGGTATACCCATAGCAGA+TGG 0.528111 tig0027301:+21832 Msa1433390:five_prime_UTR
TTCACGTCCTAGGTTTGGAG+GGG 0.528644 tig0027301:+24065 Msa1433390:CDS
AATCAGTAGCGGTCAAATGA+TGG 0.528787 tig0027301:-24907 None:intergenic
ACAAACGAGGGGAAGTAACT+AGG 0.530088 tig0027301:-25101 None:intergenic
GCAGGAGGTGATGGTGGTCG+TGG 0.530483 tig0027301:+24021 Msa1433390:CDS
AATCAAAGAAATGGATGGAC+GGG 0.530859 tig0027301:+23810 Msa1433390:CDS
ATTTGCAGATTGTCAGGGAA+TGG 0.534431 tig0027301:+13053 None:intergenic
GGTAGGGGAAGCTATGGGGC+TGG 0.536168 tig0027301:+23928 Msa1433390:CDS
CATGGAGTCATGAACCAGAA+TGG 0.540521 tig0027301:+22820 Msa1433390:five_prime_UTR
GGCCACTATACTTGTAGTCT+CGG 0.540771 tig0027301:-24167 None:intergenic
ATTGATTATAATTTGCACCT+GGG 0.540968 tig0027301:+22390 Msa1433390:five_prime_UTR
AAATAATTCTCGAGCAGACA+TGG 0.541733 tig0027301:-22234 None:intergenic
CTCCTTCCTTCATCACGAGC+TGG 0.543013 tig0027301:-24832 None:intergenic
GCAGAAGTGAAATCAATACT+TGG 0.543335 tig0027301:+22635 Msa1433390:five_prime_UTR
TGGTCATACACACCTGCTAT+GGG 0.545382 tig0027301:-21916 None:intergenic
CATTAATACCCATCTGCTAT+GGG 0.545937 tig0027301:-21841 None:intergenic
AACCGAGACTACAAGTATAG+TGG 0.547514 tig0027301:+24165 Msa1433390:CDS
CAGGGATATGAAAGTAGCCA+AGG 0.550934 tig0027301:+21539 Msa1433390:five_prime_UTR
GGGAGGAGAATACTAGCAAA+AGG 0.551136 tig0027301:+22411 Msa1433390:five_prime_UTR
GCGGAAGCAAAGGCAGCATA+CGG 0.554194 tig0027301:-21873 None:intergenic
CTTGGGCGGTCATAAGGACC+AGG 0.554744 tig0027301:-24868 None:intergenic
GTTCTTCCTGTAGATCATGA+TGG 0.555995 tig0027301:+23717 Msa1433390:intron
TTGTGTAGGTATACAACTAG+TGG 0.557536 tig0027301:+24682 Msa1433390:intron
CTCCTGCCAAAGGACAATCT+CGG 0.558163 tig0027301:-24005 None:intergenic
TCCAAGCTTCAACCTCAACA+AGG 0.559953 tig0027301:+20553 Msa1433390:five_prime_UTR
AAGGCACAGCCCAGGATGGG+GGG 0.560024 tig0027301:+23862 Msa1433390:CDS
CGAGATTGTCCTTTGGCAGG+AGG 0.560589 tig0027301:+24006 Msa1433390:CDS
CAGGATGACTGTTTCAAATG+TGG 0.561074 tig0027301:+23964 Msa1433390:CDS
AGGTTTGGAGGGGATCGCCT+TGG 0.561107 tig0027301:+24075 Msa1433390:CDS
AATGGTTATGGGAAGGAAAG+AGG 0.565681 tig0027301:+24754 Msa1433390:CDS
ATTATAATTTGCACCTGGGG+AGG 0.566749 tig0027301:+22394 Msa1433390:five_prime_UTR
GTGATCGCTATGCTAGTGAC+AGG 0.568218 tig0027301:+24190 Msa1433390:CDS
AGATCAGACTGATATTCCCT+TGG 0.569056 tig0027301:-21556 None:intergenic
AGAATACTAGCAAAAGGTGC+TGG 0.576202 tig0027301:+22417 Msa1433390:five_prime_UTR
TGCCAGCTCGTGATGAAGGA+AGG 0.577153 tig0027301:+24830 Msa1433390:CDS
CAATCAAAGAAATGGATGGA+CGG 0.577207 tig0027301:+23809 Msa1433390:CDS
CAGTCAACAAGGCACAGCCC+AGG 0.578143 tig0027301:+23854 Msa1433390:CDS
AACCACCATACACCACTGAC+AGG 0.578147 tig0027301:+21938 Msa1433390:five_prime_UTR
TTCAGACCGTCGGGGAATGG+AGG 0.579926 tig0027301:+23783 Msa1433390:CDS
TGCAGATTGTCAGGGAATGG+AGG 0.582542 tig0027301:+13056 None:intergenic
GATGAAGGAAGGAGTTATAG+GGG 0.585367 tig0027301:+24841 Msa1433390:CDS
CTAATAGAAGTGGAAGGAGG+CGG 0.585554 tig0027301:-21750 None:intergenic
TGTCAGTGGTGTATGGTGGT+TGG 0.586006 tig0027301:-21936 None:intergenic
AGGCGATCCCCTCCAAACCT+AGG 0.586100 tig0027301:-24072 None:intergenic
ATTGCATTTGCAGATTGTCA+GGG 0.586253 tig0027301:+13048 None:intergenic
AGGATGACTGTTTCAAATGT+GGG 0.586550 tig0027301:+23965 Msa1433390:CDS
TTGATTATAATTTGCACCTG+GGG 0.586761 tig0027301:+22391 Msa1433390:five_prime_UTR
GCAGAATTACATGAAATGCT+AGG 0.587261 tig0027301:+22300 Msa1433390:five_prime_UTR
CCAGCGAGAGATTCTAACGC+AGG 0.588400 tig0027301:+24953 Msa1433390:three_prime_UTR
TGTGGTAAAGGTAGAGCTCA+AGG 0.590002 tig0027301:+21484 Msa1433390:five_prime_UTR
AAATTGGAGCTGCAACATAG+TGG 0.592429 tig0027301:+22602 Msa1433390:five_prime_UTR
AGCAGCACTAGAGTACTCAT+AGG 0.592699 tig0027301:-21962 None:intergenic
GAGGAACGATGTCAATGCAA+TGG 0.595040 tig0027301:+22471 Msa1433390:five_prime_UTR
TGTCACTAGCATAGCGATCA+CGG 0.597431 tig0027301:-24188 None:intergenic
TGCATTGACATCGTTCCTCG+TGG 0.598177 tig0027301:-22467 None:intergenic
CCAAGCTTCAACCTCAACAA+GGG 0.599651 tig0027301:+20554 Msa1433390:five_prime_UTR
TGATTGCTACTGTTGCATGT+TGG 0.603742 tig0027301:+24925 Msa1433390:exon
TTTGATCTTTGAGATGCGGT+GGG 0.603751 tig0027301:+21384 Msa1433390:intron
CCCGCAAAATGGTTATGGGA+AGG 0.605592 tig0027301:+24747 Msa1433390:CDS
TCACAGTTTCAGACAACCGC+AGG 0.606444 tig0027301:+25014 Msa1433390:three_prime_UTR
TGCTATTGTTCCGAGAGACA+AGG 0.607451 tig0027301:+21582 Msa1433390:five_prime_UTR
AGTAACTGTATCTCATCAGT+TGG 0.607918 tig0027301:+22064 Msa1433390:five_prime_UTR
GCAAGTGATCGATATGGCAG+TGG 0.607962 tig0027301:+24715 Msa1433390:CDS
GATGCAATCAAAGAAATGGA+TGG 0.610297 tig0027301:+23805 Msa1433390:CDS
TACATTGATGATCGTTATGA+CGG 0.612196 tig0027301:+24111 Msa1433390:CDS
TTTGAAGGAAACCCTTGTTG+AGG 0.614606 tig0027301:-20565 None:intergenic
TTGCATCCTCCATTCCCCGA+CGG 0.618468 tig0027301:-23789 None:intergenic
GAAAGAGGCTATGACCGAAA+CGG 0.621535 tig0027301:+24769 Msa1433390:CDS
AGGAGTTATAGGGGTAGACC+TGG 0.622881 tig0027301:+24850 Msa1433390:CDS
TTATGACGGAGGACGTTATG+GGG 0.626407 tig0027301:+24125 Msa1433390:CDS
GCAGACCAACGTTACAGAGG+TGG 0.626631 tig0027301:+23892 Msa1433390:CDS
CCACCATCACCTCCTGCCAA+AGG 0.626760 tig0027301:-24015 None:intergenic
CCTGCGTTAGAATCTCTCGC+TGG 0.628414 tig0027301:-24953 None:intergenic
GAGGTATACCCATAGCAGAT+GGG 0.634405 tig0027301:+21833 Msa1433390:five_prime_UTR
CAGTAGCGGTCAAATGATGG+TGG 0.636691 tig0027301:-24904 None:intergenic
GGTGCTGATAGATATGGAAG+CGG 0.637986 tig0027301:+24805 Msa1433390:CDS
CAACACGCAAGTTACAGGCA+TGG 0.641717 tig0027301:-22497 None:intergenic
TATGGGGCTGGAGATAGGGT+AGG 0.643765 tig0027301:+23940 Msa1433390:CDS
CCTTTGGCAGGAGGTGATGG+TGG 0.645070 tig0027301:+24015 Msa1433390:CDS
CGAAACGGTGGTGCGCGTGG+AGG 0.646149 tig0027301:+24784 Msa1433390:CDS
TCGCATCATCTCAGTCAACA+AGG 0.646358 tig0027301:+23843 Msa1433390:CDS
GACTAGCGTCAAACAAACGA+GGG 0.649922 tig0027301:-25113 None:intergenic
AGGGATATGAAAGTAGCCAA+GGG 0.650486 tig0027301:+21540 Msa1433390:five_prime_UTR
GACCTGTCAGTGGTGTATGG+TGG 0.656072 tig0027301:-21940 None:intergenic
TGTATCGCTCACGTTCACCA+AGG 0.663256 tig0027301:-24092 None:intergenic
TGCAGAAAGTACATAAAAGG+CGG 0.666341 tig0027301:-21892 None:intergenic
CAGTTACTCAGAATGAAGAG+AGG 0.667208 tig0027301:-22049 None:intergenic
GATTTACTAATAGAAGTGGA+AGG 0.671103 tig0027301:-21756 None:intergenic
TCACCAAGTCAGTTAAGGGG+TGG 0.671167 tig0027301:+22278 Msa1433390:five_prime_UTR
TGTTCACCAAGTCAGTTAAG+GGG 0.675802 tig0027301:+22275 Msa1433390:five_prime_UTR
TCTATAAAACTAGAATCCTG+CGG 0.677566 tig0027301:-25030 None:intergenic
AGAGGCTATGACCGAAACGG+TGG 0.684036 tig0027301:+24772 Msa1433390:CDS
AGGAGGCGGATGAACAGACA+CGG 0.689030 tig0027301:-21736 None:intergenic
GATGCAGACCAACGTTACAG+AGG 0.693509 tig0027301:+23889 Msa1433390:CDS
TGACTAGCGTCAAACAAACG+AGG 0.699147 tig0027301:-25114 None:intergenic
TTACTAATAGAAGTGGAAGG+AGG 0.701009 tig0027301:-21753 None:intergenic
TCTACTGATTGAGAAAATAG+CGG 0.702550 tig0027301:+22713 Msa1433390:five_prime_UTR
GTACTCATAGGACCTGTCAG+TGG 0.704206 tig0027301:-21950 None:intergenic
AGGGATACAGGACGACCACG+TGG 0.710858 tig0027301:+23742 Msa1433390:CDS
GATTGTAGTGAATTATAACG+AGG 0.714962 tig0027301:+21814 Msa1433390:five_prime_UTR
ACTAGCGTCAAACAAACGAG+GGG 0.728863 tig0027301:-25112 None:intergenic
ATTGATGATCGTTATGACGG+AGG 0.731591 tig0027301:+24114 Msa1433390:CDS
GCAACAGTAGCAATCAGTAG+CGG 0.734865 tig0027301:-24918 None:intergenic
GTAATAAACCCAAATCCACG+TGG 0.753361 tig0027301:-23757 None:intergenic
GGTAAAGGTAGAGCTCAAGG+TGG 0.767137 tig0027301:+21487 Msa1433390:five_prime_UTR
GCGAAAGCATGATCTCCACG+AGG 0.793215 tig0027301:+22452 Msa1433390:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTCTTATTTTGTTTAAT+TGG + tig0027301:14016-14035 Msa1433390:intron 10.0%
!!! ATTCAATTAGATTTTTTTTT+GGG + tig0027301:15740-15759 Msa1433390:intron 10.0%
!!! TTGTTAAATTTTGATTATAT+AGG + tig0027301:16423-16442 Msa1433390:intron 10.0%
!! ATGAAATATATAAAAATCAA+TGG - tig0027301:19048-19067 None:intergenic 10.0%
!!! TTGAATTAACATTTTTATTT+AGG - tig0027301:20243-20262 None:intergenic 10.0%
!!! TATTAGAGTAATTTTTTTTT+TGG - tig0027301:20356-20375 None:intergenic 10.0%
!!! ATAATTTTATATAATTTGGA+AGG + tig0027301:21615-21634 Msa1433390:five_prime_UTR 10.0%
!! TATTGTTTAAATTTATATCA+TGG + tig0027301:22802-22821 Msa1433390:five_prime_UTR 10.0%
!!! TTATAATTATTTTATAGCTA+TGG - tig0027301:24263-24282 None:intergenic 10.0%
!! TTATGTCTAATTATATTTAT+TGG + tig0027301:24327-24346 Msa1433390:intron 10.0%
!!! AAGAAAAATAACATTTTAAA+TGG - tig0027301:24470-24489 None:intergenic 10.0%
!!! AAATTATTGTTTTAAAGCTA+TGG - tig0027301:13792-13811 None:intergenic 15.0%
!!! CATTCAATTAGATTTTTTTT+TGG + tig0027301:15739-15758 Msa1433390:intron 15.0%
!! AAAAAAGATTCAAAACAAAT+AGG - tig0027301:17097-17116 None:intergenic 15.0%
!! TGATAACATATATAATGTAA+TGG - tig0027301:17307-17326 None:intergenic 15.0%
!!! CAATAATTTAATCTTTTGAA+TGG - tig0027301:17449-17468 None:intergenic 15.0%
!!! TTTTAGAGTAAAACATTTTA+GGG - tig0027301:18150-18169 None:intergenic 15.0%
!!! TTTTTAGAGTAAAACATTTT+AGG - tig0027301:18151-18170 None:intergenic 15.0%
!!! TTTAGGGTTATTTTTTATTT+TGG - tig0027301:18283-18302 None:intergenic 15.0%
!!! TGTTATAGTTTAGAATTTTA+GGG - tig0027301:18299-18318 None:intergenic 15.0%
!!! ATGTTATAGTTTAGAATTTT+AGG - tig0027301:18300-18319 None:intergenic 15.0%
!!! AAAATAATGTCTTATTCATT+TGG - tig0027301:19012-19031 None:intergenic 15.0%
!!! CAATATTTTCCATTTAAAAA+GGG - tig0027301:20013-20032 None:intergenic 15.0%
!!! ACAATATTTTCCATTTAAAA+AGG - tig0027301:20014-20033 None:intergenic 15.0%
!!! TTTTTTTTCTAACCTTAAAA+AGG + tig0027301:20474-20493 Msa1433390:intron 15.0%
!! TTACTACAACTAAAAAAAAA+TGG - tig0027301:20900-20919 None:intergenic 15.0%
!!! TTCAAAATTATTGTAGTTTT+TGG + tig0027301:21085-21104 Msa1433390:intron 15.0%
!! ATTGAAGAATTTATTATGTT+TGG + tig0027301:21310-21329 Msa1433390:intron 15.0%
!! AGTAATTCAAAAAAATCATT+CGG - tig0027301:22117-22136 None:intergenic 15.0%
!! AGAAAATTATATGTATACTT+AGG + tig0027301:23256-23275 Msa1433390:intron 15.0%
!! TAAATTGTATCTATAATTGA+TGG + tig0027301:23300-23319 Msa1433390:intron 15.0%
!! AAATTGTATCTATAATTGAT+GGG + tig0027301:23301-23320 Msa1433390:intron 15.0%
!!! TATCTAAAACTTATTTAAAC+TGG + tig0027301:24393-24412 Msa1433390:intron 15.0%
!!! ATCTAAAACTTATTTAAACT+GGG + tig0027301:24394-24413 Msa1433390:intron 15.0%
!!! ATTTTGTTTAATTGATAATG+TGG + tig0027301:24490-24509 Msa1433390:intron 15.0%
!!! TTTTGTTTAATTGATAATGT+GGG + tig0027301:24491-24510 Msa1433390:intron 15.0%
!! TGAATAAATACTACTAAAAA+GGG - tig0027301:24570-24589 None:intergenic 15.0%
!! ATGAATAAATACTACTAAAA+AGG - tig0027301:24571-24590 None:intergenic 15.0%
!!! ATTTTGTTTAATTGGTAATG+TGG + tig0027301:14024-14043 Msa1433390:intron 20.0%
!!! TTTTGTTTAATTGGTAATGT+GGG + tig0027301:14025-14044 Msa1433390:intron 20.0%
!! TAAATACTACTACTAAAAAG+AGG - tig0027301:14103-14122 None:intergenic 20.0%
!! TATCAATATTCAAAACATCA+AGG + tig0027301:15365-15384 Msa1433390:intron 20.0%
!! ATCAATATTCAAAACATCAA+GGG + tig0027301:15366-15385 Msa1433390:intron 20.0%
!!! ATTTTTTTTTGGGTTTCATT+TGG + tig0027301:15750-15769 Msa1433390:intron 20.0%
!! ATTTAGATAAAGAGAATGAT+CGG - tig0027301:15828-15847 None:intergenic 20.0%
!!! AATTTCTAGTTGCAATAAAA+GGG + tig0027301:15944-15963 Msa1433390:intron 20.0%
!! GATATGTTAGATTTATGTTT+AGG + tig0027301:16469-16488 Msa1433390:intron 20.0%
!! GTAGAATTGTTAAAATTGTT+AGG + tig0027301:16515-16534 Msa1433390:intron 20.0%
!!! GGTTTATGTTTTATGATTTT+AGG + tig0027301:16536-16555 Msa1433390:intron 20.0%
!!! TTATGATTTTAGGATAGTTT+AGG + tig0027301:16546-16565 Msa1433390:intron 20.0%
!! TAGAATTGTTAGAATTGTTT+AGG + tig0027301:16570-16589 Msa1433390:intron 20.0%
!!! AATTGTTTAGGTTTAGATTT+AGG + tig0027301:16582-16601 Msa1433390:intron 20.0%
!!! AGAAGTTTTATTGAATTGTT+AGG + tig0027301:16631-16650 Msa1433390:intron 20.0%
!! TTTATTGAATTGTTAGGTTT+AGG + tig0027301:16637-16656 Msa1433390:intron 20.0%
!! TAGAATTGTTAGAATTGTTT+AGG + tig0027301:16570-16589 Msa1433390:intron 20.0%
!! TTATCACATTACATTACATT+CGG + tig0027301:17321-17340 Msa1433390:intron 20.0%
!! GATTAAATTATTGTTAGACT+TGG + tig0027301:17456-17475 Msa1433390:intron 20.0%
!! CAAAAGATTAAATTCTTGTA+AGG - tig0027301:17556-17575 None:intergenic 20.0%
!!! CAAGAATTTAATCTTTTGAA+AGG + tig0027301:17558-17577 Msa1433390:intron 20.0%
!!! GGTTATTTTTATGATTTGTA+GGG - tig0027301:18129-18148 None:intergenic 20.0%
!!! GTGATTTTGTTGAATAAATT+TGG + tig0027301:18484-18503 Msa1433390:intron 20.0%
!!! AACAATTTTCTTTTGCAATT+AGG + tig0027301:18740-18759 Msa1433390:intron 20.0%
!! TAATACTTCAATTCAATTCA+TGG + tig0027301:18972-18991 Msa1433390:intron 20.0%
!!! TCAATTGATAACGTTATAAT+TGG - tig0027301:19322-19341 None:intergenic 20.0%
!! AACAATGCATAATATATGTA+AGG - tig0027301:19398-19417 None:intergenic 20.0%
!!! GAAATTTTTAATCACACTAT+AGG - tig0027301:19499-19518 None:intergenic 20.0%
!!! TGTCTAAAATAATTTTTCGT+AGG + tig0027301:19583-19602 Msa1433390:intron 20.0%
!! AAAATAAAGGGTTAAACATA+TGG - tig0027301:20282-20301 None:intergenic 20.0%
!! GTGTGAATTTAGAAAATAAA+GGG - tig0027301:20294-20313 None:intergenic 20.0%
!! AGAGTAAATTTGGAAATTTA+GGG - tig0027301:20592-20611 None:intergenic 20.0%
!! AAGAGTAAATTTGGAAATTT+AGG - tig0027301:20593-20612 None:intergenic 20.0%
!! CTTACAAAAAAGAGTAAATT+TGG - tig0027301:20602-20621 None:intergenic 20.0%
!! TTACATGAAAACTTCAAAAA+TGG - tig0027301:21020-21039 None:intergenic 20.0%
!! ATAATAAAACAAAACAAAGC+TGG - tig0027301:21044-21063 None:intergenic 20.0%
!!! ATTTTTTTTCTCTGTTTTTC+TGG + tig0027301:21344-21363 Msa1433390:intron 20.0%
!! TATAATTTGGAAGGAATATT+TGG + tig0027301:21624-21643 Msa1433390:five_prime_UTR 20.0%
!! ACTTCAAAATTAGCTATAAT+AGG - tig0027301:22094-22113 None:intergenic 20.0%
!! TGCAAATTATAATCAATCTT+AGG - tig0027301:22387-22406 None:intergenic 20.0%
!! TCGAAAAAAAAAATATACTC+TGG + tig0027301:22532-22551 Msa1433390:five_prime_UTR 20.0%
!! ACAAATAAACAGCATATATA+AGG - tig0027301:22668-22687 None:intergenic 20.0%
!!! TTATATATGCTGTTTATTTG+TGG + tig0027301:22667-22686 Msa1433390:five_prime_UTR 20.0%
!! GATACTAAGATTATATTTGT+TGG + tig0027301:22775-22794 Msa1433390:five_prime_UTR 20.0%
!! AGATAATTGTTGTCAAATAT+GGG + tig0027301:22889-22908 Msa1433390:five_prime_UTR 20.0%
!! TGTTTATAAATTTAATGTCC+CGG + tig0027301:23099-23118 Msa1433390:intron 20.0%
!! AAACAAGCATAAAAAAATAC+CGG - tig0027301:23121-23140 None:intergenic 20.0%
!! AAACTACTCAAAATTTCTAT+AGG - tig0027301:23165-23184 None:intergenic 20.0%
!! AATTGTATCTATAATTGATG+GGG + tig0027301:23302-23321 Msa1433390:intron 20.0%
!! TTATTCATATTTCCATTATC+TGG + tig0027301:23680-23699 Msa1433390:intron 20.0%
!! GATTGAATAAAGATTTGATT+AGG + tig0027301:24530-24549 Msa1433390:intron 20.0%
!! TTCATTTATCATGAATGAAA+AGG + tig0027301:14123-14142 Msa1433390:intron 20.0%
!!! GATTCTAGTTTTATAGATTA+TGG + tig0027301:25036-25055 Msa1433390:three_prime_UTR 20.0%
!!! ATCGTTTGTTATTATCTTGT+CGG - tig0027301:13899-13918 None:intergenic 25.0%
! AAAAAGATCAATAACCTCTT+CGG + tig0027301:14140-14159 Msa1433390:intron 25.0%
! AGAACAAAAGGAATGATAAA+TGG - tig0027301:14169-14188 None:intergenic 25.0%
! AAACAAGTACATAGAACAAA+AGG - tig0027301:14181-14200 None:intergenic 25.0%
!!! TATTTTGAAAGTCCATTTGT+AGG - tig0027301:14981-15000 None:intergenic 25.0%
! TAAAGAAAACCTAAGAAGTT+GGG - tig0027301:15300-15319 None:intergenic 25.0%
! ATAAAGAAAACCTAAGAAGT+TGG - tig0027301:15301-15320 None:intergenic 25.0%
!!! TTTTGAATATTGATAGCCAA+AGG - tig0027301:15360-15379 None:intergenic 25.0%
!! AAATTAAACAGAAGCATAAG+TGG - tig0027301:15431-15450 None:intergenic 25.0%
!! TTGGATTAATGATGATGAAA+TGG - tig0027301:15515-15534 None:intergenic 25.0%
! TTTCATCATCATTAATCCAA+TGG + tig0027301:15515-15534 Msa1433390:intron 25.0%
! ATGTTAATAACCAACAACTA+CGG + tig0027301:15657-15676 Msa1433390:intron 25.0%
!!! ATTTTGAAGTTTGGTGATTT+TGG + tig0027301:15776-15795 Msa1433390:intron 25.0%
! AACTAGAAATTGTGTAACAT+CGG - tig0027301:15935-15954 None:intergenic 25.0%
!!! CAATTTCTAGTTGCAATAAA+AGG + tig0027301:15943-15962 Msa1433390:intron 25.0%
!!! ACAGTAACATTTGTTTTTGA+AGG - tig0027301:16048-16067 None:intergenic 25.0%
! AATTAACTGTCGAATTTGAT+TGG + tig0027301:16159-16178 Msa1433390:intron 25.0%
!!! CTTGTTTTTGTGATTGAAAT+TGG - tig0027301:16338-16357 None:intergenic 25.0%
!! TGTTAGAATTGTTTAGGTTT+AGG + tig0027301:16576-16595 Msa1433390:intron 25.0%
!! GATAGTTTAGGTTTATGTTT+AGG + tig0027301:16718-16737 Msa1433390:intron 25.0%
!!! TATGTTTTTTTATATGTCGC+TGG + tig0027301:17116-17135 Msa1433390:intron 25.0%
! AATACGCAATTATTCAAGAT+GGG - tig0027301:17186-17205 None:intergenic 25.0%
! ACAATTATCTTACCTTTGAA+TGG + tig0027301:17364-17383 Msa1433390:intron 25.0%
! CAATTATCTTACCTTTGAAT+GGG + tig0027301:17365-17384 Msa1433390:intron 25.0%
! AATTATCTTACCTTTGAATG+GGG + tig0027301:17366-17385 Msa1433390:intron 25.0%
!! AATCTTTTGAATGGAACAAT+GGG - tig0027301:17440-17459 None:intergenic 25.0%
!! TAATCTTTTGAATGGAACAA+TGG - tig0027301:17441-17460 None:intergenic 25.0%
!!! TAATCTTTTGAAAGGAACAA+TGG + tig0027301:17566-17585 Msa1433390:intron 25.0%
!!! AATCTTTTGAAAGGAACAAT+GGG + tig0027301:17567-17586 Msa1433390:intron 25.0%
!! ATTGTGTAGATTTGAAACAA+TGG - tig0027301:18031-18050 None:intergenic 25.0%
!!! GGGTTATTTTTATGATTTGT+AGG - tig0027301:18130-18149 None:intergenic 25.0%
!!! TGAGATTTTGAGAGTAATAA+TGG + tig0027301:18551-18570 Msa1433390:intron 25.0%
! AAGTATCTACACAATTTAAG+AGG + tig0027301:18806-18825 Msa1433390:intron 25.0%
!!! AAATTCGTGTTTTTTCTGAT+TGG - tig0027301:18833-18852 None:intergenic 25.0%
!! AGAAAAAACACGAATTTTTG+AGG + tig0027301:18836-18855 Msa1433390:intron 25.0%
!! GAAAAAACACGAATTTTTGA+GGG + tig0027301:18837-18856 Msa1433390:intron 25.0%
! ACACTAAAAATAAGTGTCAA+GGG + tig0027301:19089-19108 Msa1433390:intron 25.0%
!!! GAGGTTCTAAATTTTAAACA+CGG + tig0027301:19277-19296 Msa1433390:intron 25.0%
!!! TTGATAACGTTATAATTGGT+AGG - tig0027301:19318-19337 None:intergenic 25.0%
!!! TTTTTAGAAATGTGGAAGTT+GGG - tig0027301:19523-19542 None:intergenic 25.0%
!!! TTGTGTCCTATTTTTTAGTA+TGG + tig0027301:19656-19675 Msa1433390:intron 25.0%
!!! TCCTATTTTTTAGTATGGAT+CGG + tig0027301:19661-19680 Msa1433390:intron 25.0%
! GAGATTAATCTTCTTAAGAT+TGG + tig0027301:19706-19725 Msa1433390:intron 25.0%
! AACAGCAACAAAATTGTTAA+AGG - tig0027301:19889-19908 None:intergenic 25.0%
!!! TTCATAATAACGGAAGATTT+TGG - tig0027301:19966-19985 None:intergenic 25.0%
! CGTGTGAATTTAGAAAATAA+AGG - tig0027301:20295-20314 None:intergenic 25.0%
! GAAGAAAATCGAATATTTGT+TGG + tig0027301:20736-20755 Msa1433390:five_prime_UTR 25.0%
! AACAAATTGGGGAAAATAAA+GGG - tig0027301:20857-20876 None:intergenic 25.0%
! AAACAAATTGGGGAAAATAA+AGG - tig0027301:20858-20877 None:intergenic 25.0%
!!! CGAATTTTATTTTCCTGAAT+GGG + tig0027301:20934-20953 Msa1433390:intron 25.0%
!! ACCTTTTCTTAAAACTGTTA+AGG + tig0027301:21206-21225 Msa1433390:intron 25.0%
!!! ACCTTAACAGTTTTAAGAAA+AGG - tig0027301:21210-21229 None:intergenic 25.0%
! TCTGATAAAATAGTAGTTTG+TGG + tig0027301:21466-21485 Msa1433390:five_prime_UTR 25.0%
!! AAAATAGTAGTTTGTGGTAA+AGG + tig0027301:21472-21491 Msa1433390:five_prime_UTR 25.0%
! TCAATTCAACAAACAAATAC+AGG - tig0027301:21705-21724 None:intergenic 25.0%
! AACAGATTTACTAATAGAAG+TGG - tig0027301:21763-21782 None:intergenic 25.0%
! TACTATTCTGATGTAAAAAG+TGG - tig0027301:22142-22161 None:intergenic 25.0%
!!! TCAGAATAGTATTGATTAGT+TGG + tig0027301:22151-22170 Msa1433390:five_prime_UTR 25.0%
!!! AGTTTTGCATTAGTTTTGAA+TGG + tig0027301:22176-22195 Msa1433390:five_prime_UTR 25.0%
!! ATTGATTATAATTTGCACCT+GGG + tig0027301:22390-22409 Msa1433390:five_prime_UTR 25.0%
! TGTGATACTTGTCATAAAAT+TGG + tig0027301:22586-22605 Msa1433390:five_prime_UTR 25.0%
! GAGATAATTGTTGTCAAATA+TGG + tig0027301:22888-22907 Msa1433390:five_prime_UTR 25.0%
! AACAAGCATAAAAAAATACC+GGG - tig0027301:23120-23139 None:intergenic 25.0%
! TTATATGTATACTTAGGAAC+TGG + tig0027301:23262-23281 Msa1433390:intron 25.0%
!! AGATACAATTTAAGTTACCA+AGG - tig0027301:23292-23311 None:intergenic 25.0%
! TTGAAATTTATGCCAGATAA+TGG - tig0027301:23695-23714 None:intergenic 25.0%
!!! TGGTTTATAACTTGTTTTCA+TGG + tig0027301:24347-24366 Msa1433390:intron 25.0%
GTTGTGGTTGAATAAAGATT+TGG + tig0027301:14059-14078 Msa1433390:intron 30.0%
! GGTTGAATAAAGATTTGGTT+AGG + tig0027301:14064-14083 Msa1433390:intron 30.0%
! ATAAAGATTTGGTTAGGCAT+TGG + tig0027301:14070-14089 Msa1433390:intron 30.0%
TAGATCTTCTTGAGTAGATA+GGG - tig0027301:14461-14480 None:intergenic 30.0%
AAAATTTCTTGTTGAGAGGA+AGG - tig0027301:14586-14605 None:intergenic 30.0%
GTTGAAAATTTCTTGTTGAG+AGG - tig0027301:14590-14609 None:intergenic 30.0%
! AGTCCTCAAAAAAGCATATT+CGG + tig0027301:14723-14742 Msa1433390:intron 30.0%
TCTTCAAATACAAAAGGAGA+TGG + tig0027301:14771-14790 Msa1433390:intron 30.0%
AGAAAGAATGATCTTCCTAA+AGG + tig0027301:14795-14814 Msa1433390:intron 30.0%
GCGCATCAAAAAAGAAATAA+TGG + tig0027301:14828-14847 Msa1433390:intron 30.0%
!! ACTAAGGATCAAAGTATTGT+TGG + tig0027301:15142-15161 Msa1433390:intron 30.0%
!! CTAAGGATCAAAGTATTGTT+GGG + tig0027301:15143-15162 Msa1433390:intron 30.0%
!! TAAGGATCAAAGTATTGTTG+GGG + tig0027301:15144-15163 Msa1433390:intron 30.0%
TTCTTCTTGCAGATTCTATA+TGG - tig0027301:15209-15228 None:intergenic 30.0%
ATCATTAATCCAATGGCAAA+GGG + tig0027301:15522-15541 Msa1433390:intron 30.0%
!! TGGAATTCTGGAACATTTAA+AGG + tig0027301:15550-15569 Msa1433390:intron 30.0%
!!! ATTTGGCTGATTTTGAAGTT+TGG + tig0027301:15767-15786 Msa1433390:intron 30.0%
TGATGACTTTAGTGTACTTA+AGG - tig0027301:15887-15906 None:intergenic 30.0%
! TGTAACATCGGATTTTACTT+TGG - tig0027301:15923-15942 None:intergenic 30.0%
ACTATTCACATATTACTGTC+AGG + tig0027301:16008-16027 Msa1433390:intron 30.0%
!!! GTAACATTTGTTTTTGAAGG+AGG - tig0027301:16045-16064 None:intergenic 30.0%
TTGATGTTCACACATTTGAT+AGG + tig0027301:16097-16116 Msa1433390:intron 30.0%
TGATGTTCACACATTTGATA+GGG + tig0027301:16098-16117 Msa1433390:intron 30.0%
TAAATTACTCAAATGCCCAT+CGG + tig0027301:16135-16154 Msa1433390:intron 30.0%
CTGTTCTTATAACAGATCAT+CGG - tig0027301:16230-16249 None:intergenic 30.0%
ATCTGTTATAAGAACAGAAC+AGG + tig0027301:16233-16252 Msa1433390:intron 30.0%
! AAAACGTAACAATGGAGTTT+TGG - tig0027301:16270-16289 None:intergenic 30.0%
! AAACTCCATTGTTACGTTTT+TGG + tig0027301:16270-16289 Msa1433390:intron 30.0%
! TTTTGTGATTGAAATTGGCT+TGG - tig0027301:16333-16352 None:intergenic 30.0%
! AATTGTTTAGGTTTAGGTGT+AGG + tig0027301:16688-16707 Msa1433390:intron 30.0%
!! GTAGGTTTTGATGATAGTTT+AGG + tig0027301:16706-16725 Msa1433390:intron 30.0%
!! ATCGCATTGTTGTTTAGTTT+AGG + tig0027301:16767-16786 Msa1433390:intron 30.0%
GAATACGCAATTATTCAAGA+TGG - tig0027301:17187-17206 None:intergenic 30.0%
AGATAATTGTTGTAGTTGGA+AGG - tig0027301:17354-17373 None:intergenic 30.0%
GGTAAGATAATTGTTGTAGT+TGG - tig0027301:17358-17377 None:intergenic 30.0%
TTTGAATTTACCCCATTCAA+AGG - tig0027301:17379-17398 None:intergenic 30.0%
! GTTAGACTTGGTTTAAATGA+TGG + tig0027301:17468-17487 Msa1433390:intron 30.0%
ATTCAAGTGTCAAAAGAATG+AGG + tig0027301:17492-17511 Msa1433390:intron 30.0%
AGATTAAATTCTTGTAAGGC+TGG - tig0027301:17552-17571 None:intergenic 30.0%
ACATTTGTCTTCCTTTGAAT+GGG - tig0027301:17641-17660 None:intergenic 30.0%
AACATTTGTCTTCCTTTGAA+TGG - tig0027301:17642-17661 None:intergenic 30.0%
GAATTGAATGAATTCAACCA+AGG - tig0027301:17913-17932 None:intergenic 30.0%
CAAACATTTCATCAAACACT+TGG + tig0027301:18084-18103 Msa1433390:intron 30.0%
!! TTTTTCAGCCCTATCAAATA+TGG + tig0027301:18713-18732 Msa1433390:intron 30.0%
! TTTTCAGCCCTATCAAATAT+GGG + tig0027301:18714-18733 Msa1433390:intron 30.0%
TGTTGTTCCCATATTTGATA+GGG - tig0027301:18724-18743 None:intergenic 30.0%
! TTGTTGTTCCCATATTTGAT+AGG - tig0027301:18725-18744 None:intergenic 30.0%
! ATTTTCTTTTGCAATTAGGC+TGG + tig0027301:18744-18763 Msa1433390:intron 30.0%
GACACTAAAAATAAGTGTCA+AGG + tig0027301:19088-19107 Msa1433390:intron 30.0%
ATGAATCACCACGTATTTAA+GGG - tig0027301:19123-19142 None:intergenic 30.0%
AATGAATCACCACGTATTTA+AGG - tig0027301:19124-19143 None:intergenic 30.0%
TAAATACGTGGTGATTCATT+TGG + tig0027301:19124-19143 Msa1433390:intron 30.0%
TGGGTTATATCTTTAACCAA+TGG + tig0027301:19148-19167 Msa1433390:intron 30.0%
TTCTCTCCTGTAAATATACT+TGG + tig0027301:19237-19256 Msa1433390:intron 30.0%
TGAGTTCCAAGTATATTTAC+AGG - tig0027301:19246-19265 None:intergenic 30.0%
!!! CTACCAACGTTTTTTTTTTG+TGG + tig0027301:19350-19369 Msa1433390:intron 30.0%
TCACCACAAAAAAAAAACGT+TGG - tig0027301:19356-19375 None:intergenic 30.0%
!!! TTTTTTTTTTGTGGTGATCG+AGG + tig0027301:19359-19378 Msa1433390:intron 30.0%
CATAATATATGTAAGGTGTG+GGG - tig0027301:19391-19410 None:intergenic 30.0%
GCATAATATATGTAAGGTGT+GGG - tig0027301:19392-19411 None:intergenic 30.0%
TGCATAATATATGTAAGGTG+TGG - tig0027301:19393-19412 None:intergenic 30.0%
TAAATTGAGTCAACAAACGT+TGG - tig0027301:19457-19476 None:intergenic 30.0%
!! CTTTTTAGAAATGTGGAAGT+TGG - tig0027301:19524-19543 None:intergenic 30.0%
!! TGTGTAGCTTTTTAGAAATG+TGG - tig0027301:19531-19550 None:intergenic 30.0%
TCCGATCCATACTAAAAAAT+AGG - tig0027301:19665-19684 None:intergenic 30.0%
TGGTTCTCGATTCATAATAA+CGG - tig0027301:19976-19995 None:intergenic 30.0%
TATGAATCGAGAACCAATTT+AGG + tig0027301:19980-19999 Msa1433390:intron 30.0%
AATTCACACGCACATTTATA+AGG + tig0027301:20204-20223 Msa1433390:intron 30.0%
AATTCACACGCACATTTATA+AGG + tig0027301:20204-20223 Msa1433390:intron 30.0%
AAAAATTCATGACGTGACAT+AGG - tig0027301:20459-20478 None:intergenic 30.0%
!! TTGGAAATTTAGGGTTTTGA+AGG - tig0027301:20583-20602 None:intergenic 30.0%
! GAAAATCGAATATTTGTTGG+TGG + tig0027301:20739-20758 Msa1433390:five_prime_UTR 30.0%
CTGAGAATTGAAACAAATTG+GGG - tig0027301:20868-20887 None:intergenic 30.0%
GCTGAGAATTGAAACAAATT+GGG - tig0027301:20869-20888 None:intergenic 30.0%
TGCTGAGAATTGAAACAAAT+TGG - tig0027301:20870-20889 None:intergenic 30.0%
TTGTAGTAATTGTTGTCACA+GGG + tig0027301:20911-20930 Msa1433390:intron 30.0%
!!! GCGAATTTTATTTTCCTGAA+TGG + tig0027301:20933-20952 Msa1433390:intron 30.0%
!!! TTTTATTTTCCTGAATGGGT+TGG + tig0027301:20938-20957 Msa1433390:intron 30.0%
! AAATTCAGCTTTTATCACAG+TGG + tig0027301:21136-21155 Msa1433390:intron 30.0%
TCTATCAGCTGTTTATGTTA+GGG + tig0027301:21229-21248 Msa1433390:intron 30.0%
GTTGAGATATGTTGAATTCA+GGG + tig0027301:21521-21540 Msa1433390:five_prime_UTR 30.0%
GAATATTTGGCAGTAAGATT+GGG + tig0027301:21637-21656 Msa1433390:five_prime_UTR 30.0%
CAGGAAAGAATACTTCAATA+TGG - tig0027301:21686-21705 None:intergenic 30.0%
GATTTACTAATAGAAGTGGA+AGG - tig0027301:21759-21778 None:intergenic 30.0%
GATTGTAGTGAATTATAACG+AGG + tig0027301:21814-21833 Msa1433390:five_prime_UTR 30.0%
! AGTTTTCAAATCCAAAGCAT+TGG + tig0027301:21993-22012 Msa1433390:five_prime_UTR 30.0%
!! GTTTTCAAATCCAAAGCATT+GGG + tig0027301:21994-22013 Msa1433390:five_prime_UTR 30.0%
! TATTTTCTGCTAAAATGTCG+AGG + tig0027301:22252-22271 Msa1433390:five_prime_UTR 30.0%
! GATTGATTATAATTTGCACC+TGG + tig0027301:22389-22408 Msa1433390:five_prime_UTR 30.0%
! TTGATTATAATTTGCACCTG+GGG + tig0027301:22391-22410 Msa1433390:five_prime_UTR 30.0%
! TTTTATGACAAGTATCACAG+AGG - tig0027301:22585-22604 None:intergenic 30.0%
! TCTACTGATTGAGAAAATAG+CGG + tig0027301:22713-22732 Msa1433390:five_prime_UTR 30.0%
! AATTTCAACTTGTTCCATTC+TGG - tig0027301:22837-22856 None:intergenic 30.0%
! TGAAATTTTTGCTCAGATTG+TGG + tig0027301:22850-22869 Msa1433390:five_prime_UTR 30.0%
TAGCTGTATGAAAACTATTC+TGG + tig0027301:22933-22952 Msa1433390:exon 30.0%
ATTCAATGCACAAGTTTCTA+TGG + tig0027301:23058-23077 Msa1433390:intron 30.0%
TTTATGTAAGCGTCATTCTT+TGG + tig0027301:23138-23157 Msa1433390:intron 30.0%
GCTTAAATTAGCCACTAAAA+CGG - tig0027301:23202-23221 None:intergenic 30.0%
TATCTATAATTGATGGGGAT+GGG + tig0027301:23307-23326 Msa1433390:intron 30.0%
ACAAGATATAAGTAGAAGGT+AGG - tig0027301:23448-23467 None:intergenic 30.0%
CAAGACAAGATATAAGTAGA+AGG - tig0027301:23452-23471 None:intergenic 30.0%
TACAAGCAAGATGGATAAAA+TGG - tig0027301:23537-23556 None:intergenic 30.0%
ATAAGATCATACAAGCAAGA+TGG - tig0027301:23546-23565 None:intergenic 30.0%
TCATACATACAAACAAGATG+AGG - tig0027301:23595-23614 None:intergenic 30.0%
! TCTTGTTTGTATGTATGATG+TGG + tig0027301:23597-23616 Msa1433390:intron 30.0%
!! ATGATGTGGTTCTATTTTAC+TGG + tig0027301:23611-23630 Msa1433390:intron 30.0%
! TTATTACATTTTCAGACCGT+CGG + tig0027301:23773-23792 Msa1433390:CDS 30.0%
! TACATTGATGATCGTTATGA+CGG + tig0027301:24111-24130 Msa1433390:CDS 30.0%
GGATAGTAACAAATGATTGA+AGG + tig0027301:24368-24387 Msa1433390:intron 30.0%
!! TTAATTGATAATGTGGGCAA+CGG + tig0027301:24497-24516 Msa1433390:intron 30.0%
ATAAAGATTTGATTAGGCAC+TGG + tig0027301:24536-24555 Msa1433390:intron 30.0%
TAACAAATACATAGACCAGA+AGG - tig0027301:24642-24661 None:intergenic 30.0%
! TGTTTTGCTGAAAATTGTGT+AGG + tig0027301:24668-24687 Msa1433390:intron 30.0%
TCTATAAAACTAGAATCCTG+CGG - tig0027301:25033-25052 None:intergenic 30.0%
CATGTTCAATTGCATTTGAA+AGG - tig0027301:25147-25166 None:intergenic 30.0%
CTTTCAAATGCAATTGAACA+TGG + tig0027301:25145-25164 Msa1433390:three_prime_UTR 30.0%
AGAATGACTGTTTCAGATGT+GGG + tig0027301:13199-13218 Msa1433390:intron 35.0%
ATGATGACTGTTTCAGATGT+GGG + tig0027301:13292-13311 Msa1433390:intron 35.0%
AACCGAGACTACAAATATAG+TGG + tig0027301:13693-13712 Msa1433390:intron 35.0%
!! TAATTGGTAATGTGGGCAAT+TGG + tig0027301:14032-14051 Msa1433390:intron 35.0%
!! AATTGGTAATGTGGGCAATT+GGG + tig0027301:14033-14052 Msa1433390:intron 35.0%
ATGATAAATGGAAACCGAAG+AGG - tig0027301:14157-14176 None:intergenic 35.0%
TGCTTTGCTGAAAATTGTGT+AGG + tig0027301:14211-14230 Msa1433390:intron 35.0%
GAATTGCAAGTGATCAACAT+GGG + tig0027301:14253-14272 Msa1433390:intron 35.0%
GATTCTTTCTCTTGGAATCT+AGG - tig0027301:14312-14331 None:intergenic 35.0%
AGTTCCTCTTCAGAAATCTT+TGG - tig0027301:14399-14418 None:intergenic 35.0%
CTAGATCTTCTTGAGTAGAT+AGG - tig0027301:14462-14481 None:intergenic 35.0%
TACTCAAGAAGATCTAGACA+TGG + tig0027301:14465-14484 Msa1433390:intron 35.0%
AGCGACTCTTCAAATACAAA+AGG + tig0027301:14765-14784 Msa1433390:intron 35.0%
!! AAACTATACACTGATTCGAC+TGG + tig0027301:14913-14932 Msa1433390:intron 35.0%
GACTTTCAAAATAGCCAAAC+AGG + tig0027301:14988-15007 Msa1433390:intron 35.0%
ATACTTTGATCCTTAGTCGT+AGG - tig0027301:15139-15158 None:intergenic 35.0%
TTATCACTCCTTCATTCTGA+GGG - tig0027301:15186-15205 None:intergenic 35.0%
AGTCTATCTGCTACTGAATA+TGG - tig0027301:15462-15481 None:intergenic 35.0%
! CAAACTAGTAAGGCTTTTAC+CGG - tig0027301:15488-15507 None:intergenic 35.0%
CATCATTAATCCAATGGCAA+AGG + tig0027301:15521-15540 Msa1433390:intron 35.0%
!!! CAAAGGGAATTTTGGAATTC+TGG + tig0027301:15538-15557 Msa1433390:intron 35.0%
!!! CATTTGTTTTTGAAGGAGGA+TGG - tig0027301:16041-16060 None:intergenic 35.0%
TATAAGAACAGAACAGGCAT+AGG + tig0027301:16239-16258 Msa1433390:intron 35.0%
GAGAACCAAAAACGTAACAA+TGG - tig0027301:16278-16297 None:intergenic 35.0%
AAGAAAAATCGCCTATGACA+TGG + tig0027301:16876-16895 Msa1433390:intron 35.0%
! CTTCGAATCCTTCTTTTTGA+CGG - tig0027301:16924-16943 None:intergenic 35.0%
ATTCAAACTTGCCAAACAAC+AGG + tig0027301:17392-17411 Msa1433390:intron 35.0%
TATGTTTGAGTCCTGTTGTT+TGG - tig0027301:17406-17425 None:intergenic 35.0%
GGTAATTCAAACTTGCCAAA+CGG - tig0027301:17619-17638 None:intergenic 35.0%
GTTTGAATTACCCCATTCAA+AGG + tig0027301:17627-17646 Msa1433390:intron 35.0%
CATTTGTCTTCCTTTGAATG+GGG - tig0027301:17640-17659 None:intergenic 35.0%
AGGAAGACAAATGTTGTAGT+TGG + tig0027301:17647-17666 Msa1433390:intron 35.0%
AGACAAATGTTGTAGTTGGA+AGG + tig0027301:17651-17670 Msa1433390:intron 35.0%
TGTCTTGATGTAACGTTAAG+AGG - tig0027301:17946-17965 None:intergenic 35.0%
! TGTAGATTTGAAACAATGGC+CGG - tig0027301:18027-18046 None:intergenic 35.0%
!! AGAGAGATTTTGAGAGAGAT+TGG + tig0027301:18518-18537 Msa1433390:intron 35.0%
!! GAGAGATTTTGAGAGAGATT+GGG + tig0027301:18519-18538 Msa1433390:intron 35.0%
!! AGAGATTTTGAGAGAGATTG+GGG + tig0027301:18520-18539 Msa1433390:intron 35.0%
AGTTAACTGCCGAATTTGAT+TGG - tig0027301:18663-18682 None:intergenic 35.0%
ATTTGAGTCCCTTAAATACG+TGG + tig0027301:19112-19131 Msa1433390:intron 35.0%
AGTATGAAGTTTCACTCCAT+TGG - tig0027301:19167-19186 None:intergenic 35.0%
AATGGAGTGAAACTTCATAC+TGG + tig0027301:19166-19185 Msa1433390:intron 35.0%
TATTGTGAGCTTAACTCAGT+TGG - tig0027301:19425-19444 None:intergenic 35.0%
TCCTCGTGAATTTAGCTAAT+TGG + tig0027301:20096-20115 Msa1433390:intron 35.0%
TCCAATTAGCTAAATTCACG+AGG - tig0027301:20100-20119 None:intergenic 35.0%
! GTTACTTGTCGTCCTTTTTA+AGG - tig0027301:20489-20508 None:intergenic 35.0%
AAGTAACGACAGTCAGAAAT+AGG + tig0027301:20502-20521 Msa1433390:five_prime_UTR 35.0%
!!! AGAAATAGGAGCGTTAGTTT+TGG + tig0027301:20516-20535 Msa1433390:five_prime_UTR 35.0%
! TTGATTCGTAACGAAAACTG+TGG + tig0027301:20675-20694 Msa1433390:intron 35.0%
! GGTTTCAGGATTTTCGAAAT+TGG + tig0027301:20696-20715 Msa1433390:intron 35.0%
! TCGAATATTTGTTGGTGGAT+TGG + tig0027301:20744-20763 Msa1433390:five_prime_UTR 35.0%
!! CGAATATTTGTTGGTGGATT+GGG + tig0027301:20745-20764 Msa1433390:five_prime_UTR 35.0%
! GAACATGCTTTTGATCGTTA+CGG + tig0027301:20793-20812 Msa1433390:five_prime_UTR 35.0%
AATTGGGGAAAATAAAGGGT+TGG - tig0027301:20853-20872 None:intergenic 35.0%
GTTGTAGTAATTGTTGTCAC+AGG + tig0027301:20910-20929 Msa1433390:intron 35.0%
!!! GATTTTGATTATCGACACTG+CGG + tig0027301:21111-21130 Msa1433390:intron 35.0%
GTCTATCAGCTGTTTATGTT+AGG + tig0027301:21228-21247 Msa1433390:intron 35.0%
! GTTAGGATGCACTCTATTTT+TGG + tig0027301:21267-21286 Msa1433390:intron 35.0%
!!! ACCTTTTGATCTTTGAGATG+CGG + tig0027301:21380-21399 Msa1433390:intron 35.0%
GGTTGAGATATGTTGAATTC+AGG + tig0027301:21520-21539 Msa1433390:five_prime_UTR 35.0%
TACTAATGAACCTTGTCTCT+CGG - tig0027301:21595-21614 None:intergenic 35.0%
GGAATATTTGGCAGTAAGAT+TGG + tig0027301:21636-21655 Msa1433390:five_prime_UTR 35.0%
TTACTAATAGAAGTGGAAGG+AGG - tig0027301:21756-21775 None:intergenic 35.0%
CATTAATACCCATCTGCTAT+GGG - tig0027301:21844-21863 None:intergenic 35.0%
! TGCAGAAAGTACATAAAAGG+CGG - tig0027301:21895-21914 None:intergenic 35.0%
! GGTTGCAGAAAGTACATAAA+AGG - tig0027301:21898-21917 None:intergenic 35.0%
AGTAACTGTATCTCATCAGT+TGG + tig0027301:22064-22083 Msa1433390:five_prime_UTR 35.0%
AAATAATTCTCGAGCAGACA+TGG - tig0027301:22237-22256 None:intergenic 35.0%
GCAGAATTACATGAAATGCT+AGG + tig0027301:22300-22319 Msa1433390:five_prime_UTR 35.0%
GCAGAAGTGAAATCAATACT+TGG + tig0027301:22635-22654 Msa1433390:five_prime_UTR 35.0%
GTTTATTTGTGGCTGCAATT+TGG + tig0027301:22678-22697 Msa1433390:five_prime_UTR 35.0%
ATTGTTGTCAAATATGGGCT+TGG + tig0027301:22894-22913 Msa1433390:five_prime_UTR 35.0%
TTGTTGTCAAATATGGGCTT+GGG + tig0027301:22895-22914 Msa1433390:five_prime_UTR 35.0%
! AATGCTGTTTGCATGTTTCA+CGG + tig0027301:23013-23032 Msa1433390:intron 35.0%
!!! AAATTGCATTGCCGTTTTAG+TGG + tig0027301:23188-23207 Msa1433390:intron 35.0%
GTATCTATAATTGATGGGGA+TGG + tig0027301:23306-23325 Msa1433390:intron 35.0%
ATCTATAATTGATGGGGATG+GGG + tig0027301:23308-23327 Msa1433390:intron 35.0%
CTTGCTTGTATGATCTTATC+TGG + tig0027301:23547-23566 Msa1433390:intron 35.0%
CAAACAAGATGAGGATACAA+TGG - tig0027301:23586-23605 None:intergenic 35.0%
! TATTACATTTTCAGACCGTC+GGG + tig0027301:23774-23793 Msa1433390:CDS 35.0%
GATGCAATCAAAGAAATGGA+TGG + tig0027301:23805-23824 Msa1433390:CDS 35.0%
CAATCAAAGAAATGGATGGA+CGG + tig0027301:23809-23828 Msa1433390:CDS 35.0%
AATCAAAGAAATGGATGGAC+GGG + tig0027301:23810-23829 Msa1433390:CDS 35.0%
! TTACAGAGGTGGTTTTTCTT+CGG + tig0027301:23903-23922 Msa1433390:CDS 35.0%
AGGATGACTGTTTCAAATGT+GGG + tig0027301:23965-23984 Msa1433390:CDS 35.0%
TTTCCATTTGTCATTCCTTC+TGG + tig0027301:24624-24643 Msa1433390:intron 35.0%
TTGTGTAGGTATACAACTAG+TGG + tig0027301:24682-24701 Msa1433390:intron 35.0%
TGATGAAGGAAGGAGTTATA+GGG + tig0027301:24840-24859 Msa1433390:CDS 35.0%
AACATTAGGGACGTAGTTAT+TGG + tig0027301:24979-24998 Msa1433390:three_prime_UTR 35.0%
! GACGTAGTTATTGGTTATGT+AGG + tig0027301:24988-25007 Msa1433390:three_prime_UTR 35.0%
! TGCAATTGAACATGGCTTTA+TGG + tig0027301:25153-25172 Msa1433390:three_prime_UTR 35.0%
GAGGATGCAATCAAACACAT+GGG + tig0027301:13075-13094 Msa1433390:intron 40.0%
ACCGACATCTCAAAGAAGAT+AGG + tig0027301:13169-13188 Msa1433390:intron 40.0%
!! CCCTATCTTCTTTGAGATGT+CGG - tig0027301:13173-13192 None:intergenic 40.0%
CCGACATCTCAAAGAAGATA+GGG + tig0027301:13170-13189 Msa1433390:intron 40.0%
ATCTCAAAGAAGATAGGGCA+GGG + tig0027301:13175-13194 Msa1433390:intron 40.0%
CAGAATGACTGTTTCAGATG+TGG + tig0027301:13198-13217 Msa1433390:intron 40.0%
CATGATGACTGTTTCAGATG+TGG + tig0027301:13291-13310 Msa1433390:intron 40.0%
CGAGAATGTACTTTCACAAG+AGG + tig0027301:13333-13352 Msa1433390:intron 40.0%
! TTTCACAAGAGGTGATGATG+TGG + tig0027301:13344-13363 Msa1433390:intron 40.0%
CACAATGACTGTTTCAGATG+TGG + tig0027301:13384-13403 Msa1433390:intron 40.0%
CTCTCCCAAGAGATAATGAT+GGG + tig0027301:13436-13455 Msa1433390:intron 40.0%
TCTCCCAAGAGATAATGATG+GGG + tig0027301:13437-13456 Msa1433390:intron 40.0%
TCCTGAAAAAGGACATTCTC+GGG - tig0027301:13520-13539 None:intergenic 40.0%
CTCCTGAAAAAGGACATTCT+CGG - tig0027301:13521-13540 None:intergenic 40.0%
!!! TGTCCTTTTTCAGGAGATGA+TGG + tig0027301:13525-13544 Msa1433390:intron 40.0%
GGCCACTATATTTGTAGTCT+CGG - tig0027301:13698-13717 None:intergenic 40.0%
GAGACTACAAATATAGTGGC+CGG + tig0027301:13697-13716 Msa1433390:intron 40.0%
AGACTACAAATATAGTGGCC+GGG + tig0027301:13698-13717 Msa1433390:intron 40.0%
TTGTGTAGGCATACAACTAG+TGG + tig0027301:14225-14244 Msa1433390:intron 40.0%
CGAATTGCAAGTGATCAACA+TGG + tig0027301:14252-14271 Msa1433390:intron 40.0%
GAAATGGCGATTCTTTCTCT+TGG - tig0027301:14320-14339 None:intergenic 40.0%
AGAGAAAGAATCGCCATTTC+AGG + tig0027301:14320-14339 Msa1433390:intron 40.0%
! GAAATCTTTGGAGGAGATGA+TGG - tig0027301:14387-14406 None:intergenic 40.0%
! TCCTCCAAAGATTTCTGAAG+AGG + tig0027301:14392-14411 Msa1433390:intron 40.0%
TCCTCTTCAGAAATCTTTGG+AGG - tig0027301:14396-14415 None:intergenic 40.0%
! CTCTGCGAACAATGTTGTTT+CGG + tig0027301:14539-14558 Msa1433390:intron 40.0%
!! CGAACAATGTTGTTTCGGTT+GGG + tig0027301:14544-14563 Msa1433390:intron 40.0%
TGAGATGTCACTCAACTGAA+GGG - tig0027301:14620-14639 None:intergenic 40.0%
TTGAGATGTCACTCAACTGA+AGG - tig0027301:14621-14640 None:intergenic 40.0%
TTCAGTTGAGTGACATCTCA+AGG + tig0027301:14620-14639 Msa1433390:intron 40.0%
TCAGTTGAGTGACATCTCAA+GGG + tig0027301:14621-14640 Msa1433390:intron 40.0%
GACATCTCAAGGGATTATCT+TGG + tig0027301:14631-14650 Msa1433390:intron 40.0%
AAGGGATTATCTTGGATTCC+AGG + tig0027301:14639-14658 Msa1433390:intron 40.0%
!!! GCTCCGAATATGCTTTTTTG+AGG - tig0027301:14729-14748 None:intergenic 40.0%
! AAAAGCATATTCGGAGCTTG+AGG + tig0027301:14732-14751 Msa1433390:intron 40.0%
GTTAGCCGAGAAATTGAAGT+CGG + tig0027301:14873-14892 Msa1433390:intron 40.0%
TAGTTTGACCCTTTGACTGT+TGG - tig0027301:14899-14918 None:intergenic 40.0%
GTTTGAGCTTCAAACCTGTT+TGG - tig0027301:15005-15024 None:intergenic 40.0%
TATCACTCCTTCATTCTGAG+GGG - tig0027301:15185-15204 None:intergenic 40.0%
GTTATCACTCCTTCATTCTG+AGG - tig0027301:15187-15206 None:intergenic 40.0%
TCTACAACTTCTTGGTTAGG+AGG - tig0027301:15253-15272 None:intergenic 40.0%
GGTTCTACAACTTCTTGGTT+AGG - tig0027301:15256-15275 None:intergenic 40.0%
AACCAAGAAGTTGTAGAACC+AGG + tig0027301:15256-15275 Msa1433390:intron 40.0%
AAACTAAGGCCCAACTTCTT+AGG + tig0027301:15288-15307 Msa1433390:intron 40.0%
CGGTAAAAGCCTTACTAGTT+TGG + tig0027301:15486-15505 Msa1433390:intron 40.0%
AAATGGTCGCCAAACTAGTA+AGG - tig0027301:15498-15517 None:intergenic 40.0%
! TCCAATGGCAAAGGGAATTT+TGG + tig0027301:15530-15549 Msa1433390:intron 40.0%
TCCAAAATTCCCTTTGCCAT+TGG - tig0027301:15534-15553 None:intergenic 40.0%
CTATAGTACTCCGTAGTTGT+TGG - tig0027301:15670-15689 None:intergenic 40.0%
! GGATTTTACTTTGGCGACTT+TGG - tig0027301:15914-15933 None:intergenic 40.0%
!!! TTGTTTTTGAAGGAGGATGG+AGG - tig0027301:16038-16057 None:intergenic 40.0%
TTCGACAGTTAATTGCCGAT+GGG - tig0027301:16153-16172 None:intergenic 40.0%
ATTCGACAGTTAATTGCCGA+TGG - tig0027301:16154-16173 None:intergenic 40.0%
CTGTCGAATTTGATTGGAAC+CGG + tig0027301:16165-16184 Msa1433390:intron 40.0%
TTAACTACCGAGGAAAACCT+CGG + tig0027301:16194-16213 Msa1433390:intron 40.0%
!!! GTTACGTTTTTGGTTCTCCT+AGG + tig0027301:16280-16299 Msa1433390:intron 40.0%
! TGGCTTGGAATGACTTGAAA+TGG - tig0027301:16318-16337 None:intergenic 40.0%
TGATGGTTCCGTCAAAAAGA+AGG + tig0027301:16913-16932 Msa1433390:intron 40.0%
CGTCAAAAAGAAGGATTCGA+AGG + tig0027301:16922-16941 Msa1433390:intron 40.0%
!! AGCGGGAGAACATGTTATTT+TGG + tig0027301:16977-16996 Msa1433390:intron 40.0%
AGGAAGATGCTTGAATGTAG+TGG + tig0027301:17062-17081 Msa1433390:intron 40.0%
ACAGGACTCAAACATATGTC+CGG + tig0027301:17410-17429 Msa1433390:intron 40.0%
!! ATGAAGGTATCGAAGTGTCA+AGG - tig0027301:17524-17543 None:intergenic 40.0%
!! TGTAAGGCTGGTTTAGATGA+AGG - tig0027301:17540-17559 None:intergenic 40.0%
GAAAGGAACAATGGGAATGT+CGG + tig0027301:17575-17594 Msa1433390:intron 40.0%
AAAGGAACAATGGGAATGTC+GGG + tig0027301:17576-17595 Msa1433390:intron 40.0%
CAGAAGATCGTGATTAGGTA+GGG - tig0027301:17683-17702 None:intergenic 40.0%
! AAACGTGACGAGCATGTTTT+GGG - tig0027301:17785-17804 None:intergenic 40.0%
! AAAACGTGACGAGCATGTTT+TGG - tig0027301:17786-17805 None:intergenic 40.0%
TGTAACGTTAAGAGGTCTCA+AGG - tig0027301:17938-17957 None:intergenic 40.0%
GACGTTCATGCACAATTCAA+CGG - tig0027301:17997-18016 None:intergenic 40.0%
! GTAGATTTGAAACAATGGCC+GGG - tig0027301:18026-18045 None:intergenic 40.0%
! CAGCCGATTCCAATCAAATT+CGG + tig0027301:18651-18670 Msa1433390:intron 40.0%
CTGCCGAATTTGATTGGAAT+CGG - tig0027301:18657-18676 None:intergenic 40.0%
! CTTTTGCAATTAGGCTGGTA+AGG + tig0027301:18749-18768 Msa1433390:intron 40.0%
TACGTGGTGATTCATTTGGT+TGG + tig0027301:19128-19147 Msa1433390:intron 40.0%
ACGTGGTGATTCATTTGGTT+GGG + tig0027301:19129-19148 Msa1433390:intron 40.0%
GGAACTCATATGCAATTGTG+AGG + tig0027301:19258-19277 Msa1433390:intron 40.0%
TCTCTATAATTACGTGCCCA+TGG - tig0027301:19690-19709 None:intergenic 40.0%
AAAGGGAGTCTCACCTAAAT+TGG - tig0027301:19996-20015 None:intergenic 40.0%
! GGTGAGACTCCCTTTTTAAA+TGG + tig0027301:20001-20020 Msa1433390:intron 40.0%
TTTGAAGGAAACCCTTGTTG+AGG - tig0027301:20568-20587 None:intergenic 40.0%
GTAACGAAAACTGTGGTTTC+AGG + tig0027301:20682-20701 Msa1433390:intron 40.0%
TCGAAATTGGAAGCAATGTC+TGG + tig0027301:20709-20728 Msa1433390:five_prime_UTR 40.0%
!! TATTTGTTGGTGGATTGGGT+TGG + tig0027301:20749-20768 Msa1433390:five_prime_UTR 40.0%
!! ATTTGTTGGTGGATTGGGTT+GGG + tig0027301:20750-20769 Msa1433390:five_prime_UTR 40.0%
! TTCAGCTTTTATCACAGTGG+TGG + tig0027301:21139-21158 Msa1433390:intron 40.0%
ACCGCATCTCAAAGATCAAA+AGG - tig0027301:21384-21403 None:intergenic 40.0%
!!! TTTTGATCTTTGAGATGCGG+TGG + tig0027301:21383-21402 Msa1433390:intron 40.0%
!! TTTGATCTTTGAGATGCGGT+GGG + tig0027301:21384-21403 Msa1433390:intron 40.0%
AGGGATATGAAAGTAGCCAA+GGG + tig0027301:21540-21559 Msa1433390:five_prime_UTR 40.0%
AGATCAGACTGATATTCCCT+TGG - tig0027301:21559-21578 None:intergenic 40.0%
AGTAAGATTGGGCTGAAAAC+TGG + tig0027301:21648-21667 Msa1433390:five_prime_UTR 40.0%
CCATTAATACCCATCTGCTA+TGG - tig0027301:21845-21864 None:intergenic 40.0%
CCATAGCAGATGGGTATTAA+TGG + tig0027301:21842-21861 Msa1433390:five_prime_UTR 40.0%
TACATAAAAGGCGGAAGCAA+AGG - tig0027301:21886-21905 None:intergenic 40.0%
!! ATCCAAAGCATTGGGATCAT+AGG + tig0027301:22002-22021 Msa1433390:five_prime_UTR 40.0%
! GCAATTGCTGCTTAGATAGT+GGG + tig0027301:22024-22043 Msa1433390:five_prime_UTR 40.0%
CAGTTACTCAGAATGAAGAG+AGG - tig0027301:22052-22071 None:intergenic 40.0%
GTGTTCACCAAGTCAGTTAA+GGG + tig0027301:22274-22293 Msa1433390:five_prime_UTR 40.0%
TGTTCACCAAGTCAGTTAAG+GGG + tig0027301:22275-22294 Msa1433390:five_prime_UTR 40.0%
! ATTATAATTTGCACCTGGGG+AGG + tig0027301:22394-22413 Msa1433390:five_prime_UTR 40.0%
! AGAATACTAGCAAAAGGTGC+TGG + tig0027301:22417-22436 Msa1433390:five_prime_UTR 40.0%
AAAGACAACACGCAAGTTAC+AGG - tig0027301:22505-22524 None:intergenic 40.0%
AAATTGGAGCTGCAACATAG+TGG + tig0027301:22602-22621 Msa1433390:five_prime_UTR 40.0%
GAACACAGAAGTAAGTTGTC+TGG + tig0027301:22969-22988 Msa1433390:intron 40.0%
TCTATAATTGATGGGGATGG+GGG + tig0027301:23309-23328 Msa1433390:intron 40.0%
CACACAAGATGAGGATACAA+TGG - tig0027301:23483-23502 None:intergenic 40.0%
GTATCCTCATCTTGTGTGTA+TGG + tig0027301:23485-23504 Msa1433390:intron 40.0%
AGATCCATACACACAAGATG+AGG - tig0027301:23492-23511 None:intergenic 40.0%
GTTCTTCCTGTAGATCATGA+TGG + tig0027301:23717-23736 Msa1433390:intron 40.0%
! TCCTGTAGATCATGATGGAA+AGG + tig0027301:23722-23741 Msa1433390:intron 40.0%
! CCTGTAGATCATGATGGAAA+GGG + tig0027301:23723-23742 Msa1433390:intron 40.0%
! ATCATGATGGAAAGGGATAC+AGG + tig0027301:23730-23749 Msa1433390:CDS 40.0%
GTAATAAACCCAAATCCACG+TGG - tig0027301:23760-23779 None:intergenic 40.0%
! ATTACATTTTCAGACCGTCG+GGG + tig0027301:23775-23794 Msa1433390:CDS 40.0%
GGAGGATGCAATCAAAGAAA+TGG + tig0027301:23801-23820 Msa1433390:CDS 40.0%
AAAAACCACCTCTGTAACGT+TGG - tig0027301:23900-23919 None:intergenic 40.0%
! TACAGAGGTGGTTTTTCTTC+GGG + tig0027301:23904-23923 Msa1433390:CDS 40.0%
CAGGATGACTGTTTCAAATG+TGG + tig0027301:23964-23983 Msa1433390:CDS 40.0%
! GTTCATTTTCTTCACGTCCT+AGG + tig0027301:24055-24074 Msa1433390:CDS 40.0%
! TTTTCTTCACGTCCTAGGTT+TGG + tig0027301:24060-24079 Msa1433390:CDS 40.0%
! ATTGATGATCGTTATGACGG+AGG + tig0027301:24114-24133 Msa1433390:CDS 40.0%
AACCGAGACTACAAGTATAG+TGG + tig0027301:24165-24184 Msa1433390:CDS 40.0%
AAAGCACGAGTGGTGTAATT+CGG - tig0027301:24238-24257 None:intergenic 40.0%
TGAAAAGGATCATTAACCCC+TGG + tig0027301:24601-24620 Msa1433390:intron 40.0%
GAATGACAAATGGAAACCAG+GGG - tig0027301:24620-24639 None:intergenic 40.0%
GGAATGACAAATGGAAACCA+GGG - tig0027301:24621-24640 None:intergenic 40.0%
AGGAATGACAAATGGAAACC+AGG - tig0027301:24622-24641 None:intergenic 40.0%
AGACCAGAAGGAATGACAAA+TGG - tig0027301:24630-24649 None:intergenic 40.0%
ACTACCCGCAAAATGGTTAT+GGG + tig0027301:24743-24762 Msa1433390:CDS 40.0%
! TCCTTCCCATAACCATTTTG+CGG - tig0027301:24751-24770 None:intergenic 40.0%
AATGGTTATGGGAAGGAAAG+AGG + tig0027301:24754-24773 Msa1433390:CDS 40.0%
GTGATGAAGGAAGGAGTTAT+AGG + tig0027301:24839-24858 Msa1433390:CDS 40.0%
GATGAAGGAAGGAGTTATAG+GGG + tig0027301:24841-24860 Msa1433390:CDS 40.0%
AATCAGTAGCGGTCAAATGA+TGG - tig0027301:24910-24929 None:intergenic 40.0%
TGATTGCTACTGTTGCATGT+TGG + tig0027301:24925-24944 Msa1433390:exon 40.0%
GGAGGATGCAATCAAACACA+TGG + tig0027301:13074-13093 Msa1433390:intron 45.0%
AATCAAACACATGGGTGCAC+TGG + tig0027301:13083-13102 Msa1433390:intron 45.0%
! ATGTGCCTTTTCGACAGAGA+GGG - tig0027301:13124-13143 None:intergenic 45.0%
CATCTCAAAGAAGATAGGGC+AGG + tig0027301:13174-13193 Msa1433390:intron 45.0%
GTCTGAGAAACGACAATCTC+GGG - tig0027301:13241-13260 None:intergenic 45.0%
CGTCTGAGAAACGACAATCT+CGG - tig0027301:13242-13261 None:intergenic 45.0%
! ATGATAGTGACGCTGGAGAT+AGG + tig0027301:13262-13281 Msa1433390:intron 45.0%
! TGATAGTGACGCTGGAGATA+GGG + tig0027301:13263-13282 Msa1433390:intron 45.0%
CCATCATTATCTCTTGGGAG+AGG - tig0027301:13438-13457 None:intergenic 45.0%
CCTCTCCCAAGAGATAATGA+TGG + tig0027301:13435-13454 Msa1433390:intron 45.0%
CAGCCCCATCATTATCTCTT+GGG - tig0027301:13443-13462 None:intergenic 45.0%
! ATAATGATGGGGCTGGAGAT+AGG + tig0027301:13448-13467 Msa1433390:intron 45.0%
! TAATGATGGGGCTGGAGATA+GGG + tig0027301:13449-13468 Msa1433390:intron 45.0%
GTGGTGACTGTTTCAACTGT+GGG + tig0027301:13478-13497 Msa1433390:intron 45.0%
CCACCATCATCTCCTGAAAA+AGG - tig0027301:13531-13550 None:intergenic 45.0%
!!! CCTTTTTCAGGAGATGATGG+TGG + tig0027301:13528-13547 Msa1433390:intron 45.0%
GTTCATCTTCTTCACCTCCT+AGG + tig0027301:13568-13587 Msa1433390:intron 45.0%
TCTTCTTCACCTCCTAGGTT+TGG + tig0027301:13573-13592 Msa1433390:intron 45.0%
! CGATACCTTGATGATCGTCA+TGG + tig0027301:13636-13655 Msa1433390:intron 45.0%
! TACCTTGATGATCGTCATGG+TGG + tig0027301:13639-13658 Msa1433390:intron 45.0%
TGGAGGACGTTATGAGGATA+GGG + tig0027301:13659-13678 Msa1433390:intron 45.0%
TGTTACCGAATTGCCACTCT+TGG + tig0027301:13758-13777 Msa1433390:intron 45.0%
AAGCACCAAGAGTGGCAATT+CGG - tig0027301:13766-13785 None:intergenic 45.0%
!! TATGGCAAAAGCACCAAGAG+TGG - tig0027301:13774-13793 None:intergenic 45.0%
TGGTTCAAACTTCCTGCAAC+TGG + tig0027301:14278-14297 Msa1433390:intron 45.0%
TCTTGAGTAGATAGGGAGAC+TGG - tig0027301:14454-14473 None:intergenic 45.0%
AGATCTAGACATGGTAGCTG+CGG + tig0027301:14474-14493 Msa1433390:intron 45.0%
AGTATCAACGTCTTCGGTCT+TGG - tig0027301:14521-14540 None:intergenic 45.0%
! TCGCAGAGTATCAACGTCTT+CGG - tig0027301:14527-14546 None:intergenic 45.0%
!! GCGAACAATGTTGTTTCGGT+TGG + tig0027301:14543-14562 Msa1433390:intron 45.0%
!! TTGAGAGGAAGGTACTCCAT+TGG - tig0027301:14575-14594 None:intergenic 45.0%
! GTTGGCCGACTTCAATTTCT+CGG - tig0027301:14881-14900 None:intergenic 45.0%
CAGTGAATTGAAGCCCTTGT+TGG + tig0027301:14942-14961 Msa1433390:intron 45.0%
CCTAGCTTCTGATCCAACAA+GGG - tig0027301:14958-14977 None:intergenic 45.0%
TCAGAAGCTAGGCCTACAAA+TGG + tig0027301:14966-14985 Msa1433390:intron 45.0%
TGAAGCTCAAACGACAAACC+TGG + tig0027301:15013-15032 Msa1433390:intron 45.0%
GAAGCTCAAACGACAAACCT+GGG + tig0027301:15014-15033 Msa1433390:intron 45.0%
! GGAACATTTCAGAGTGTCCT+TGG + tig0027301:15035-15054 Msa1433390:intron 45.0%
! ACATTTCAGAGTGTCCTTGG+AGG + tig0027301:15038-15057 Msa1433390:intron 45.0%
! CTAAAGGTGTATATGGAGGG+TGG - tig0027301:15075-15094 None:intergenic 45.0%
! CGGCTAAAGGTGTATATGGA+GGG - tig0027301:15078-15097 None:intergenic 45.0%
ACAACTTCTTGGTTAGGAGG+AGG - tig0027301:15250-15269 None:intergenic 45.0%
!! TGCCTGGTTCTACAACTTCT+TGG - tig0027301:15261-15280 None:intergenic 45.0%
AGAAGTTGTAGAACCAGGCA+AGG + tig0027301:15261-15280 Msa1433390:intron 45.0%
TCCGCTAGATAATCGACCTT+TGG + tig0027301:15341-15360 Msa1433390:intron 45.0%
GCCAAAGGTCGATTATCTAG+CGG - tig0027301:15345-15364 None:intergenic 45.0%
! ACTAGTAAGGCTTTTACCGG+AGG - tig0027301:15485-15504 None:intergenic 45.0%
! TTAACTGCCGAGGTTTTCCT+CGG - tig0027301:16204-16223 None:intergenic 45.0%
AATGGCTGAAAATCGCACCT+AGG - tig0027301:16300-16319 None:intergenic 45.0%
TCAGAACCAGAGTAACGTTC+AGG + tig0027301:16838-16857 Msa1433390:intron 45.0%
CAGAACCAGAGTAACGTTCA+GGG + tig0027301:16839-16858 Msa1433390:intron 45.0%
AAATCGCCTATGACATGGCA+CGG + tig0027301:16881-16900 Msa1433390:intron 45.0%
! AAAGAAGGATTCGAAGGTGC+TGG + tig0027301:16928-16947 Msa1433390:intron 45.0%
TGTACAATCAGTCGAGGTTG+TGG + tig0027301:16951-16970 Msa1433390:intron 45.0%
TTTGGTCCTCAACCAAAAGC+AGG + tig0027301:16995-17014 Msa1433390:intron 45.0%
TCCTCGTCACACAAGTCAAT+CGG - tig0027301:17046-17065 None:intergenic 45.0%
GAATGGAACAATGGGAATGC+CGG - tig0027301:17432-17451 None:intergenic 45.0%
! GGTATCGAAGTGTCAAGGAA+TGG - tig0027301:17519-17538 None:intergenic 45.0%
CCAGAAGATCGTGATTAGGT+AGG - tig0027301:17684-17703 None:intergenic 45.0%
CCTACCTAATCACGATCTTC+TGG + tig0027301:17681-17700 Msa1433390:intron 45.0%
ACCTAATCACGATCTTCTGG+CGG + tig0027301:17684-17703 Msa1433390:intron 45.0%
TGTTCCAGTGGATCGATATG+CGG - tig0027301:17753-17772 None:intergenic 45.0%
!! GAGAGTATCATTCACTTGGG+TGG - tig0027301:17824-17843 None:intergenic 45.0%
!! GGGGAGAGTATCATTCACTT+GGG - tig0027301:17827-17846 None:intergenic 45.0%
!! AGGGGAGAGTATCATTCACT+TGG - tig0027301:17828-17847 None:intergenic 45.0%
!! CAGGGATGGTGGAATATGTT+CGG - tig0027301:17873-17892 None:intergenic 45.0%
AACCTCAGAGGTTGAAGGTT+CGG - tig0027301:17969-17988 None:intergenic 45.0%
GTTCATGCACAATTCAACGG+TGG - tig0027301:17994-18013 None:intergenic 45.0%
ATGCGCTCATGCTACAAATC+TGG - tig0027301:18592-18611 None:intergenic 45.0%
GATTTGTAGCATGAGCGCAT+TGG + tig0027301:18592-18611 Msa1433390:intron 45.0%
! GCATTGGCATTTAACTGTCG+AGG + tig0027301:18608-18627 Msa1433390:intron 45.0%
ATTCGGCAGTTAACTGCTGA+AGG + tig0027301:18668-18687 Msa1433390:intron 45.0%
GTGAGCTTAACTCAGTTGGT+AGG - tig0027301:19421-19440 None:intergenic 45.0%
TCCAAGCTTCAACCTCAACA+AGG + tig0027301:20553-20572 Msa1433390:five_prime_UTR 45.0%
CCAAGCTTCAACCTCAACAA+GGG + tig0027301:20554-20573 Msa1433390:five_prime_UTR 45.0%
!! TGGATTGGGTTGGGATGTTA+CGG + tig0027301:20759-20778 Msa1433390:five_prime_UTR 45.0%
! TAAAGGGTTGGCAGAGAAAG+AGG - tig0027301:20841-20860 None:intergenic 45.0%
CAATCTAGGTCACGAAATCG+TGG - tig0027301:21177-21196 None:intergenic 45.0%
CGATTTCGTGACCTAGATTG+CGG + tig0027301:21177-21196 Msa1433390:intron 45.0%
! GTTAGGGAAGTTGCGAGTTT+TGG + tig0027301:21245-21264 Msa1433390:intron 45.0%
!!! GGAAGTTGCGAGTTTTGGTT+AGG + tig0027301:21250-21269 Msa1433390:intron 45.0%
TGTGGTAAAGGTAGAGCTCA+AGG + tig0027301:21484-21503 Msa1433390:five_prime_UTR 45.0%
GCTCAAGGTGGAGATTAGTA+TGG + tig0027301:21499-21518 Msa1433390:five_prime_UTR 45.0%
CAGGGATATGAAAGTAGCCA+AGG + tig0027301:21539-21558 Msa1433390:five_prime_UTR 45.0%
TGCTATTGTTCCGAGAGACA+AGG + tig0027301:21582-21601 Msa1433390:five_prime_UTR 45.0%
CTAATAGAAGTGGAAGGAGG+CGG - tig0027301:21753-21772 None:intergenic 45.0%
GAGGTATACCCATAGCAGAT+GGG + tig0027301:21833-21852 Msa1433390:five_prime_UTR 45.0%
TACTTTCTGCAACCCATAGC+AGG + tig0027301:21904-21923 Msa1433390:five_prime_UTR 45.0%
TGGTCATACACACCTGCTAT+GGG - tig0027301:21919-21938 None:intergenic 45.0%
TTGGTCATACACACCTGCTA+TGG - tig0027301:21920-21939 None:intergenic 45.0%
! AGCAGCACTAGAGTACTCAT+AGG - tig0027301:21965-21984 None:intergenic 45.0%
TGCCTATGATCCCAATGCTT+TGG - tig0027301:22007-22026 None:intergenic 45.0%
! GGCAATTGCTGCTTAGATAG+TGG + tig0027301:22023-22042 Msa1433390:five_prime_UTR 45.0%
GGTGTTCACCAAGTCAGTTA+AGG + tig0027301:22273-22292 Msa1433390:five_prime_UTR 45.0%
GGGAGGAGAATACTAGCAAA+AGG + tig0027301:22411-22430 Msa1433390:five_prime_UTR 45.0%
GAGGAACGATGTCAATGCAA+TGG + tig0027301:22471-22490 Msa1433390:five_prime_UTR 45.0%
CATGGAGTCATGAACCAGAA+TGG + tig0027301:22820-22839 Msa1433390:five_prime_UTR 45.0%
! ACTTAGGAACTGGTTCTCCT+TGG + tig0027301:23272-23291 Msa1433390:intron 45.0%
CCCTTTCCATCATGATCTAC+AGG - tig0027301:23726-23745 None:intergenic 45.0%
GAAATGGATGGACGGGAAAT+TGG + tig0027301:23817-23836 Msa1433390:CDS 45.0%
TCGCATCATCTCAGTCAACA+AGG + tig0027301:23843-23862 Msa1433390:CDS 45.0%
! TGGTTTTTCTTCGGGTGGTA+GGG + tig0027301:23912-23931 Msa1433390:CDS 45.0%
! GTTATGACGGAGGACGTTAT+GGG + tig0027301:24124-24143 Msa1433390:CDS 45.0%
! TTATGACGGAGGACGTTATG+GGG + tig0027301:24125-24144 Msa1433390:CDS 45.0%
GGCCACTATACTTGTAGTCT+CGG - tig0027301:24170-24189 None:intergenic 45.0%
TGTCACTAGCATAGCGATCA+CGG - tig0027301:24191-24210 None:intergenic 45.0%
CGATCTGCAAGTGATCGATA+TGG + tig0027301:24709-24728 Msa1433390:CDS 45.0%
GACTACCCGCAAAATGGTTA+TGG + tig0027301:24742-24761 Msa1433390:CDS 45.0%
! CCTTCCCATAACCATTTTGC+GGG - tig0027301:24750-24769 None:intergenic 45.0%
GAAAGAGGCTATGACCGAAA+CGG + tig0027301:24769-24788 Msa1433390:CDS 45.0%
!! GGTGCTGATAGATATGGAAG+CGG + tig0027301:24805-24824 Msa1433390:CDS 45.0%
GCAACAGTAGCAATCAGTAG+CGG - tig0027301:24921-24940 None:intergenic 45.0%
TCTAACGCAGGAGCAACATT+AGG + tig0027301:24965-24984 Msa1433390:three_prime_UTR 45.0%
CTAACGCAGGAGCAACATTA+GGG + tig0027301:24966-24985 Msa1433390:three_prime_UTR 45.0%
ACAAACGAGGGGAAGTAACT+AGG - tig0027301:25104-25123 None:intergenic 45.0%
ACTAGCGTCAAACAAACGAG+GGG - tig0027301:25115-25134 None:intergenic 45.0%
GACTAGCGTCAAACAAACGA+GGG - tig0027301:25116-25135 None:intergenic 45.0%
TGACTAGCGTCAAACAAACG+AGG - tig0027301:25117-25136 None:intergenic 45.0%
!! CATAAAAAAAAAAAAAAAAT+TGG - tig0027301:16802-16821 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTTTGA+GGG - tig0027301:20430-20449 None:intergenic 5.0%
!!! ATTTTTTTTTTTTTTTTTTG+AGG - tig0027301:20431-20450 None:intergenic 5.0%
!!! AGTAATAATTTTATATAATT+TGG + tig0027301:21611-21630 Msa1433390:five_prime_UTR 5.0%
CACATGGGTGCACTGGAAAT+TGG + tig0027301:13090-13109 Msa1433390:intron 50.0%
! CATGTGCCTTTTCGACAGAG+AGG - tig0027301:13125-13144 None:intergenic 50.0%
! GAAAAGGCACATGCCAGGAT+GGG + tig0027301:13132-13151 Msa1433390:intron 50.0%
! AAAAGGCACATGCCAGGATG+GGG + tig0027301:13133-13152 Msa1433390:intron 50.0%
TGTTTCAGATGTGGGCATCC+AGG + tig0027301:13207-13226 Msa1433390:intron 50.0%
GTTTCAGATGTGGGCATCCA+GGG + tig0027301:13208-13227 Msa1433390:intron 50.0%
! TCAGACGATGATAGTGACGC+TGG + tig0027301:13255-13274 Msa1433390:intron 50.0%
! ACAAGAGGTGATGATGTGGC+TGG + tig0027301:13348-13367 Msa1433390:intron 50.0%
! GTGATGATGTGGCTGGAGAT+GGG + tig0027301:13355-13374 Msa1433390:intron 50.0%
! TGATGATGTGGCTGGAGATG+GGG + tig0027301:13356-13375 Msa1433390:intron 50.0%
TCTTGGGAGAGGACATTCTC+GGG - tig0027301:13427-13446 None:intergenic 50.0%
CTCTTGGGAGAGGACATTCT+CGG - tig0027301:13428-13447 None:intergenic 50.0%
CCAGCCCCATCATTATCTCT+TGG - tig0027301:13444-13463 None:intergenic 50.0%
! CCAAGAGATAATGATGGGGC+TGG + tig0027301:13441-13460 Msa1433390:intron 50.0%
CGTGGTGACTGTTTCAACTG+TGG + tig0027301:13477-13496 Msa1433390:intron 50.0%
! GCCCGAGAATGTCCTTTTTC+AGG + tig0027301:13516-13535 Msa1433390:intron 50.0%
TCTTCACCTCCTAGGTTTGG+AGG + tig0027301:13576-13595 Msa1433390:intron 50.0%
CTCCACCATGACGATCATCA+AGG - tig0027301:13644-13663 None:intergenic 50.0%
! CTTGATGATCGTCATGGTGG+AGG + tig0027301:13642-13661 Msa1433390:intron 50.0%
! TCATGGTGGAGGACGTTATG+AGG + tig0027301:13653-13672 Msa1433390:intron 50.0%
GTGGAGGACGTTATGAGGAT+AGG + tig0027301:13658-13677 Msa1433390:intron 50.0%
GTGGGCAATTGGGAAAGTTG+TGG + tig0027301:14043-14062 Msa1433390:intron 50.0%
GCAAGTGATCAACATGGGAG+TGG + tig0027301:14258-14277 Msa1433390:intron 50.0%
GAGTAGATAGGGAGACTGGA+AGG - tig0027301:14450-14469 None:intergenic 50.0%
TCAACGTCTTCGGTCTTGGT+GGG - tig0027301:14517-14536 None:intergenic 50.0%
ATCAACGTCTTCGGTCTTGG+TGG - tig0027301:14518-14537 None:intergenic 50.0%
TTTCGGTTGGGATCAGCCAA+TGG + tig0027301:14556-14575 Msa1433390:intron 50.0%
AGCATATTCGGAGCTTGAGG+AGG + tig0027301:14735-14754 Msa1433390:intron 50.0%
TCGGCTAACTGTGAAGCTTC+TGG - tig0027301:14862-14881 None:intergenic 50.0%
TGAAGTCGGCCAACAGTCAA+AGG + tig0027301:14887-14906 Msa1433390:intron 50.0%
GAAGTCGGCCAACAGTCAAA+GGG + tig0027301:14888-14907 Msa1433390:intron 50.0%
CCCTTGTTGGATCAGAAGCT+AGG + tig0027301:14955-14974 Msa1433390:intron 50.0%
GCCTAGCTTCTGATCCAACA+AGG - tig0027301:14959-14978 None:intergenic 50.0%
!! GGACACTCTGAAATGTTCCC+AGG - tig0027301:15034-15053 None:intergenic 50.0%
! GCGGCTAAAGGTGTATATGG+AGG - tig0027301:15079-15098 None:intergenic 50.0%
! GGTGCGGCTAAAGGTGTATA+TGG - tig0027301:15082-15101 None:intergenic 50.0%
TTAGTCGTAGGAGCTACCTC+TGG - tig0027301:15127-15146 None:intergenic 50.0%
AGAGGTAGCTCCTACGACTA+AGG + tig0027301:15126-15145 Msa1433390:intron 50.0%
TTGGTTAGGAGGAGGACTTG+TGG - tig0027301:15242-15261 None:intergenic 50.0%
AGTTGTAGAACCAGGCAAGG+AGG + tig0027301:15264-15283 Msa1433390:intron 50.0%
CAGTAGCAGATAGACTCCTC+CGG + tig0027301:15466-15485 Msa1433390:intron 50.0%
CATCACCCTGAACGTTACTC+TGG - tig0027301:16847-16866 None:intergenic 50.0%
GTGATTCCGTGCCATGTCAT+AGG - tig0027301:16890-16909 None:intergenic 50.0%
TGGCACGGAATCACATGTGA+TGG + tig0027301:16896-16915 Msa1433390:intron 50.0%
TGCTGGTGTACAATCAGTCG+AGG + tig0027301:16945-16964 Msa1433390:intron 50.0%
ACAATCAGTCGAGGTTGTGG+AGG + tig0027301:16954-16973 Msa1433390:intron 50.0%
AACCAAAAGCAGGTGCTCCA+GGG + tig0027301:17005-17024 Msa1433390:intron 50.0%
CCTCGTCACACAAGTCAATC+GGG - tig0027301:17045-17064 None:intergenic 50.0%
AATGTTGGAGTCTCGCCGTT+TGG + tig0027301:17601-17620 Msa1433390:intron 50.0%
TCCGCCAGAAGATCGTGATT+AGG - tig0027301:17688-17707 None:intergenic 50.0%
TTACCCGCATATCGATCCAC+TGG + tig0027301:17746-17765 Msa1433390:intron 50.0%
GTTCCAGTGGATCGATATGC+GGG - tig0027301:17752-17771 None:intergenic 50.0%
TTCAACCAAGGAGTCAACCC+AGG - tig0027301:17901-17920 None:intergenic 50.0%
TGGAGAACCTCAGAGGTTGA+AGG - tig0027301:17974-17993 None:intergenic 50.0%
! GATTTGAAACAATGGCCGGG+TGG - tig0027301:18023-18042 None:intergenic 50.0%
TCGGCTGCAGTTAACTATCG+AGG - tig0027301:18638-18657 None:intergenic 50.0%
TTAGTATGGATCGGACGCCA+TGG + tig0027301:19670-19689 Msa1433390:intron 50.0%
TAGTATGGATCGGACGCCAT+GGG + tig0027301:19671-19690 Msa1433390:intron 50.0%
CCCTTGTTGAGGTTGAAGCT+TGG - tig0027301:20557-20576 None:intergenic 50.0%
CGGCAAAATTCTCGAATGCC+AGG + tig0027301:20813-20832 Msa1433390:five_prime_UTR 50.0%
!! TTGGCAGAGAAAGAGGTACC+TGG - tig0027301:20834-20853 None:intergenic 50.0%
TCTGACACACCAACCCATTC+AGG - tig0027301:20950-20969 None:intergenic 50.0%
AAGGTCCATGACCGCAATCT+AGG - tig0027301:21191-21210 None:intergenic 50.0%
GGTAAAGGTAGAGCTCAAGG+TGG + tig0027301:21487-21506 Msa1433390:five_prime_UTR 50.0%
CGAGGTATACCCATAGCAGA+TGG + tig0027301:21832-21851 Msa1433390:five_prime_UTR 50.0%
TGTCAGTGGTGTATGGTGGT+TGG - tig0027301:21939-21958 None:intergenic 50.0%
AACCACCATACACCACTGAC+AGG + tig0027301:21938-21957 Msa1433390:five_prime_UTR 50.0%
TAGGACCTGTCAGTGGTGTA+TGG - tig0027301:21946-21965 None:intergenic 50.0%
GTACTCATAGGACCTGTCAG+TGG - tig0027301:21953-21972 None:intergenic 50.0%
TCACCAAGTCAGTTAAGGGG+TGG + tig0027301:22278-22297 Msa1433390:five_prime_UTR 50.0%
TTGCTAGTATTCTCCTCCCC+AGG - tig0027301:22410-22429 None:intergenic 50.0%
! TGCATTGACATCGTTCCTCG+TGG - tig0027301:22470-22489 None:intergenic 50.0%
CAACACGCAAGTTACAGGCA+TGG - tig0027301:22500-22519 None:intergenic 50.0%
GGAGCTGCAACATAGTGGTT+TGG + tig0027301:22607-22626 Msa1433390:five_prime_UTR 50.0%
! ATTTTCAGACCGTCGGGGAA+TGG + tig0027301:23780-23799 Msa1433390:CDS 50.0%
GATGCAGACCAACGTTACAG+AGG + tig0027301:23889-23908 Msa1433390:CDS 50.0%
! AGAGGTGGTTTTTCTTCGGG+TGG + tig0027301:23907-23926 Msa1433390:CDS 50.0%
! GTGGTTTTTCTTCGGGTGGT+AGG + tig0027301:23911-23930 Msa1433390:CDS 50.0%
! GGTTTTTCTTCGGGTGGTAG+GGG + tig0027301:23913-23932 Msa1433390:CDS 50.0%
AAGCTATGGGGCTGGAGATA+GGG + tig0027301:23936-23955 Msa1433390:CDS 50.0%
TGTTTCAAATGTGGGCGTCC+AGG + tig0027301:23973-23992 Msa1433390:CDS 50.0%
GTTTCAAATGTGGGCGTCCA+GGG + tig0027301:23974-23993 Msa1433390:CDS 50.0%
TCCTGCCAAAGGACAATCTC+GGG - tig0027301:24007-24026 None:intergenic 50.0%
CTCCTGCCAAAGGACAATCT+CGG - tig0027301:24008-24027 None:intergenic 50.0%
TCTTCACGTCCTAGGTTTGG+AGG + tig0027301:24063-24082 Msa1433390:CDS 50.0%
CTTCACGTCCTAGGTTTGGA+GGG + tig0027301:24064-24083 Msa1433390:CDS 50.0%
TTCACGTCCTAGGTTTGGAG+GGG + tig0027301:24065-24084 Msa1433390:CDS 50.0%
TGTATCGCTCACGTTCACCA+AGG - tig0027301:24095-24114 None:intergenic 50.0%
! CGTTATGACGGAGGACGTTA+TGG + tig0027301:24123-24142 Msa1433390:CDS 50.0%
GTGATCGCTATGCTAGTGAC+AGG + tig0027301:24190-24209 Msa1433390:CDS 50.0%
! AGCTATGGCAAAAGCACGAG+TGG - tig0027301:24248-24267 None:intergenic 50.0%
GCAAGTGATCGATATGGCAG+TGG + tig0027301:24715-24734 Msa1433390:CDS 50.0%
CCCGCAAAATGGTTATGGGA+AGG + tig0027301:24747-24766 Msa1433390:CDS 50.0%
!! CGTGGAGGTGCTGATAGATA+TGG + tig0027301:24799-24818 Msa1433390:CDS 50.0%
AGGAGTTATAGGGGTAGACC+TGG + tig0027301:24850-24869 Msa1433390:CDS 50.0%
CAGTAGCGGTCAAATGATGG+TGG - tig0027301:24907-24926 None:intergenic 50.0%
TCACAGTTTCAGACAACCGC+AGG + tig0027301:25014-25033 Msa1433390:three_prime_UTR 50.0%
TCGCACCCTCTCTGTCGAAA+AGG + tig0027301:13116-13135 Msa1433390:intron 55.0%
! CTGTCGAAAAGGCACATGCC+AGG + tig0027301:13127-13146 Msa1433390:intron 55.0%
! CGAAAAGGCACATGCCAGGA+TGG + tig0027301:13131-13150 Msa1433390:intron 55.0%
! AAAGGCACATGCCAGGATGG+GGG + tig0027301:13134-13153 Msa1433390:intron 55.0%
AGTGACGCTGGAGATAGGGT+AGG + tig0027301:13267-13286 Msa1433390:intron 55.0%
GTGACGCTGGAGATAGGGTA+GGG + tig0027301:13268-13287 Msa1433390:intron 55.0%
TGTTTCAGATGTGGGCGTCC+AGG + tig0027301:13300-13319 Msa1433390:intron 55.0%
GTTTCAGATGTGGGCGTCCA+GGG + tig0027301:13301-13320 Msa1433390:intron 55.0%
! GGTGATGATGTGGCTGGAGA+TGG + tig0027301:13354-13373 Msa1433390:intron 55.0%
TGTTTCAGATGTGGCCGTCC+AGG + tig0027301:13393-13412 Msa1433390:intron 55.0%
GTTTCAGATGTGGCCGTCCA+GGG + tig0027301:13394-13413 Msa1433390:intron 55.0%
ATGGGGCTGGAGATAGGGTA+GGG + tig0027301:13454-13473 Msa1433390:intron 55.0%
TGTTTCAACTGTGGGCGTCC+AGG + tig0027301:13486-13505 Msa1433390:intron 55.0%
GTTTCAACTGTGGGCGTCCA+GGG + tig0027301:13487-13506 Msa1433390:intron 55.0%
ATGAACCACTACCCCGACCA+CGG - tig0027301:13554-13573 None:intergenic 55.0%
!! CTAGGTTTGGAGGTGCTGGT+GGG + tig0027301:13586-13605 Msa1433390:intron 55.0%
GGTATCGCTCACGTTCACCA+AGG - tig0027301:13623-13642 None:intergenic 55.0%
TGTCACCAGCATAGCGATCC+CGG - tig0027301:13719-13738 None:intergenic 55.0%
TAGGCGATTCAGCCAGTTGC+AGG - tig0027301:14293-14312 None:intergenic 55.0%
!! GGAGGCACTTGAGCCTGAAA+TGG - tig0027301:14336-14355 None:intergenic 55.0%
TTCAGGCTCAAGTGCCTCCA+AGG + tig0027301:14337-14356 Msa1433390:intron 55.0%
! GATGATGGCTGAGCTGGTGA+GGG - tig0027301:14372-14391 None:intergenic 55.0%
! AGATGATGGCTGAGCTGGTG+AGG - tig0027301:14373-14392 None:intergenic 55.0%
TACGAGCAGCGTGTGCGTAT+TGG - tig0027301:14666-14685 None:intergenic 55.0%
TGCGCTTCTGCTCTGCCTTT+AGG - tig0027301:14813-14832 None:intergenic 55.0%
! TGGCACTCTAGCTTCCTCCA+AGG - tig0027301:15055-15074 None:intergenic 55.0%
TACACGAGGAGGACATGGTG+CGG - tig0027301:15098-15117 None:intergenic 55.0%
TTGGCTACACGAGGAGGACA+TGG - tig0027301:15103-15122 None:intergenic 55.0%
!! CCTTAGTTTGCCTCCTTGCC+TGG - tig0027301:15277-15296 None:intergenic 55.0%
CCAGGCAAGGAGGCAAACTA+AGG + tig0027301:15274-15293 Msa1433390:intron 55.0%
CCTCGGTAGTTAACTGCAGC+CGG - tig0027301:16187-16206 None:intergenic 55.0%
TCATCGGCAGTTAACTGCCG+AGG - tig0027301:16214-16233 None:intergenic 55.0%
!! GGAGCACCTGCTTTTGGTTG+AGG - tig0027301:17004-17023 None:intergenic 55.0%
CAACCAAAAGCAGGTGCTCC+AGG + tig0027301:17004-17023 Msa1433390:intron 55.0%
!! CCCGATTGACTTGTGTGACG+AGG + tig0027301:17042-17061 Msa1433390:intron 55.0%
TGGGAATGTCGGGCGAATGT+TGG + tig0027301:17586-17605 Msa1433390:intron 55.0%
! GGGAGCACATCATGTTCCAG+TGG - tig0027301:17765-17784 None:intergenic 55.0%
AAACGTCCAACGCTCGACGA+GGG - tig0027301:17847-17866 None:intergenic 55.0%
TAAACGTCCAACGCTCGACG+AGG - tig0027301:17848-17867 None:intergenic 55.0%
GAGTCAACCCAGGAGACACA+GGG - tig0027301:17891-17910 None:intergenic 55.0%
! TGTCTCCTGGGTTGACTCCT+TGG + tig0027301:17893-17912 Msa1433390:intron 55.0%
CACCGAACCTTCAACCTCTG+AGG + tig0027301:17964-17983 Msa1433390:intron 55.0%
TCAACGGTGGAGAACCTCAG+AGG - tig0027301:17981-18000 None:intergenic 55.0%
TGCATGAACGTCGATCCACC+CGG + tig0027301:18005-18024 Msa1433390:intron 55.0%
CGTGACCTAGATTGCGGTCA+TGG + tig0027301:21183-21202 Msa1433390:intron 55.0%
AGGAGGCGGATGAACAGACA+CGG - tig0027301:21739-21758 None:intergenic 55.0%
GCGGAAGCAAAGGCAGCATA+CGG - tig0027301:21876-21895 None:intergenic 55.0%
GACCTGTCAGTGGTGTATGG+TGG - tig0027301:21943-21962 None:intergenic 55.0%
CTGCCACCCCTTAACTGACT+TGG - tig0027301:22284-22303 None:intergenic 55.0%
! GCGAAAGCATGATCTCCACG+AGG + tig0027301:22452-22471 Msa1433390:five_prime_UTR 55.0%
ACAGGACGACCACGTGGATT+TGG + tig0027301:23748-23767 Msa1433390:CDS 55.0%
CAGGACGACCACGTGGATTT+GGG + tig0027301:23749-23768 Msa1433390:CDS 55.0%
TTGCATCCTCCATTCCCCGA+CGG - tig0027301:23792-23811 None:intergenic 55.0%
AACAAGGCACAGCCCAGGAT+GGG + tig0027301:23859-23878 Msa1433390:CDS 55.0%
GCAGACCAACGTTACAGAGG+TGG + tig0027301:23892-23911 Msa1433390:CDS 55.0%
GAAGCTATGGGGCTGGAGAT+AGG + tig0027301:23935-23954 Msa1433390:CDS 55.0%
TATGGGGCTGGAGATAGGGT+AGG + tig0027301:23940-23959 Msa1433390:CDS 55.0%
CGAGATTGTCCTTTGGCAGG+AGG + tig0027301:24006-24025 Msa1433390:CDS 55.0%
TGTCCTTTGGCAGGAGGTGA+TGG + tig0027301:24012-24031 Msa1433390:CDS 55.0%
ACGGAGGACGTTATGGGGAT+AGG + tig0027301:24130-24149 Msa1433390:CDS 55.0%
CGGAGGACGTTATGGGGATA+GGG + tig0027301:24131-24150 Msa1433390:CDS 55.0%
GGCTCAGACTACCCGCAAAA+TGG + tig0027301:24736-24755 Msa1433390:CDS 55.0%
AGAGGCTATGACCGAAACGG+TGG + tig0027301:24772-24791 Msa1433390:CDS 55.0%
GGAATGCCAGCTCGTGATGA+AGG + tig0027301:24826-24845 Msa1433390:CDS 55.0%
TGCCAGCTCGTGATGAAGGA+AGG + tig0027301:24830-24849 Msa1433390:CDS 55.0%
CTCCTTCCTTCATCACGAGC+TGG - tig0027301:24835-24854 None:intergenic 55.0%
TCCTTATGACCGCCCAAGCA+GGG + tig0027301:24873-24892 Msa1433390:CDS 55.0%
CCTGCGTTAGAATCTCTCGC+TGG - tig0027301:24956-24975 None:intergenic 55.0%
CCAGCGAGAGATTCTAACGC+AGG + tig0027301:24953-24972 Msa1433390:three_prime_UTR 55.0%
AAGGCACATGCCAGGATGGG+GGG + tig0027301:13135-13154 Msa1433390:intron 60.0%
AGCATCATCACCCCCCATCC+TGG - tig0027301:13148-13167 None:intergenic 60.0%
GATGTGGGCATCCAGGGCAT+CGG + tig0027301:13214-13233 Msa1433390:intron 60.0%
! ATGTGGGCATCCAGGGCATC+GGG + tig0027301:13215-13234 Msa1433390:intron 60.0%
TGATGTGGCTGGAGATGGGG+TGG + tig0027301:13359-13378 Msa1433390:intron 60.0%
GATGTGGCTGGAGATGGGGT+GGG + tig0027301:13360-13379 Msa1433390:intron 60.0%
GATGGGGCTGGAGATAGGGT+AGG + tig0027301:13453-13472 Msa1433390:intron 60.0%
!! TCAGGAGATGATGGTGGCCG+TGG + tig0027301:13534-13553 Msa1433390:intron 60.0%
!! GAGATGATGGTGGCCGTGGT+CGG + tig0027301:13538-13557 Msa1433390:intron 60.0%
!! AGATGATGGTGGCCGTGGTC+GGG + tig0027301:13539-13558 Msa1433390:intron 60.0%
CCAGCACCTCCAAACCTAGG+AGG - tig0027301:13585-13604 None:intergenic 60.0%
! CCTCCTAGGTTTGGAGGTGC+TGG + tig0027301:13582-13601 Msa1433390:intron 60.0%
CCACCAGCACCTCCAAACCT+AGG - tig0027301:13588-13607 None:intergenic 60.0%
!! CCTAGGTTTGGAGGTGCTGG+TGG + tig0027301:13585-13604 Msa1433390:intron 60.0%
!! TTTGGAGGTGCTGGTGGGCA+CGG + tig0027301:13591-13610 Msa1433390:intron 60.0%
GGGATCGCTATGCTGGTGAC+AGG + tig0027301:13718-13737 Msa1433390:intron 60.0%
!! GAGGGAGTGGATTGCCTTGG+AGG - tig0027301:14354-14373 None:intergenic 60.0%
!! GGTGAGGGAGTGGATTGCCT+TGG - tig0027301:14357-14376 None:intergenic 60.0%
! GGAGGAGATGATGGCTGAGC+TGG - tig0027301:14378-14397 None:intergenic 60.0%
!! GGTAGCTGCGGTGCTGCAAA+AGG + tig0027301:14486-14505 Msa1433390:intron 60.0%
! CAGCGTGTGCGTATTGGTCC+TGG - tig0027301:14660-14679 None:intergenic 60.0%
GGAGGACATGGTGCGGCTAA+AGG - tig0027301:15091-15110 None:intergenic 60.0%
!! TCTGGCTTGGCTACACGAGG+AGG - tig0027301:15109-15128 None:intergenic 60.0%
TCCTCGTGTAGCCAAGCCAG+AGG + tig0027301:15108-15127 Msa1433390:intron 60.0%
!! ACCTCTGGCTTGGCTACACG+AGG - tig0027301:15112-15131 None:intergenic 60.0%
CGTAGGAGCTACCTCTGGCT+TGG - tig0027301:15122-15141 None:intergenic 60.0%
! CCTTCATTCTGAGGGGCTGC+TGG - tig0027301:15178-15197 None:intergenic 60.0%
CCAGCAGCCCCTCAGAATGA+AGG + tig0027301:15175-15194 Msa1433390:intron 60.0%
GGAGGAGGACTTGTGGCAGT+AGG - tig0027301:15235-15254 None:intergenic 60.0%
CCGGCTGCAGTTAACTACCG+AGG + tig0027301:16184-16203 Msa1433390:intron 60.0%
CAGTCGAGGTTGTGGAGGAG+CGG + tig0027301:16959-16978 Msa1433390:intron 60.0%
AGTCGAGGTTGTGGAGGAGC+GGG + tig0027301:16960-16979 Msa1433390:intron 60.0%
!! GTCCCTGGAGCACCTGCTTT+TGG - tig0027301:17010-17029 None:intergenic 60.0%
AACGTCCAACGCTCGACGAG+GGG - tig0027301:17846-17865 None:intergenic 60.0%
TCCACCATCCCTGTGTCTCC+TGG + tig0027301:17880-17899 Msa1433390:intron 60.0%
CCACCATCCCTGTGTCTCCT+GGG + tig0027301:17881-17900 Msa1433390:intron 60.0%
CAACCCAGGAGACACAGGGA+TGG - tig0027301:17887-17906 None:intergenic 60.0%
GGAGTCAACCCAGGAGACAC+AGG - tig0027301:17892-17911 None:intergenic 60.0%
TGGGGATGGGGGAAAAGAGC+TGG + tig0027301:23320-23339 Msa1433390:intron 60.0%
AGGGATACAGGACGACCACG+TGG + tig0027301:23742-23761 Msa1433390:CDS 60.0%
TTCAGACCGTCGGGGAATGG+AGG + tig0027301:23783-23802 Msa1433390:CDS 60.0%
CAGTCAACAAGGCACAGCCC+AGG + tig0027301:23854-23873 Msa1433390:CDS 60.0%
CAACAAGGCACAGCCCAGGA+TGG + tig0027301:23858-23877 Msa1433390:CDS 60.0%
ACAAGGCACAGCCCAGGATG+GGG + tig0027301:23860-23879 Msa1433390:CDS 60.0%
GCATCATCACCCCCCATCCT+GGG - tig0027301:13147-13166 None:intergenic 60.0%
TGCATCATCACCCCCCATCC+TGG - tig0027301:23875-23894 None:intergenic 60.0%
TCGGGTGGTAGGGGAAGCTA+TGG + tig0027301:23922-23941 Msa1433390:CDS 60.0%
CGGGTGGTAGGGGAAGCTAT+GGG + tig0027301:23923-23942 Msa1433390:CDS 60.0%
GGGTGGTAGGGGAAGCTATG+GGG + tig0027301:23924-23943 Msa1433390:CDS 60.0%
GGCTGGAGATAGGGTAGGAC+AGG + tig0027301:23945-23964 Msa1433390:CDS 60.0%
CTGGGCCCGAGATTGTCCTT+TGG + tig0027301:23999-24018 Msa1433390:CDS 60.0%
GCCCGAGATTGTCCTTTGGC+AGG + tig0027301:24003-24022 Msa1433390:CDS 60.0%
CCACCATCACCTCCTGCCAA+AGG - tig0027301:24018-24037 None:intergenic 60.0%
! CCTTTGGCAGGAGGTGATGG+TGG + tig0027301:24015-24034 Msa1433390:CDS 60.0%
!! GAGGTGATGGTGGTCGTGGT+CGG + tig0027301:24025-24044 Msa1433390:CDS 60.0%
!! AGGTGATGGTGGTCGTGGTC+GGG + tig0027301:24026-24045 Msa1433390:CDS 60.0%
AGGCGATCCCCTCCAAACCT+AGG - tig0027301:24075-24094 None:intergenic 60.0%
AGGTTTGGAGGGGATCGCCT+TGG + tig0027301:24075-24094 Msa1433390:CDS 60.0%
CTTGGGCGGTCATAAGGACC+AGG - tig0027301:24871-24890 None:intergenic 60.0%
GTCCTTATGACCGCCCAAGC+AGG + tig0027301:24872-24891 Msa1433390:CDS 60.0%
! ATGTGGGCGTCCAGGGCACT+GGG + tig0027301:13308-13327 Msa1433390:intron 65.0%
CATTCTCGAGCCCAGTGCCC+TGG - tig0027301:13321-13340 None:intergenic 65.0%
! ATGTGGCCGTCCAGGGCACT+GGG + tig0027301:13401-13420 Msa1433390:intron 65.0%
GCTGGAGATAGGGTAGGGCG+TGG + tig0027301:13459-13478 Msa1433390:intron 65.0%
!! GATGATGGTGGCCGTGGTCG+GGG + tig0027301:13540-13559 Msa1433390:intron 65.0%
!! TTGGAGGTGCTGGTGGGCAC+GGG + tig0027301:13592-13611 Msa1433390:intron 65.0%
AGTGGCCGGGATCGCTATGC+TGG + tig0027301:13711-13730 Msa1433390:intron 65.0%
TGGCTGAGCTGGTGAGGGAG+TGG - tig0027301:14367-14386 None:intergenic 65.0%
AGGTGCTCCAGGGACTGTCG+CGG + tig0027301:17015-17034 Msa1433390:intron 65.0%
ACTCTCCCCTCGTCGAGCGT+TGG + tig0027301:17838-17857 Msa1433390:intron 65.0%
CCCAGGAGACACAGGGATGG+TGG - tig0027301:17884-17903 None:intergenic 65.0%
CAAGGCACAGCCCAGGATGG+GGG + tig0027301:23861-23880 Msa1433390:CDS 65.0%
AAGGCACAGCCCAGGATGGG+GGG + tig0027301:23862-23881 Msa1433390:CDS 65.0%
GGTAGGGGAAGCTATGGGGC+TGG + tig0027301:23928-23947 Msa1433390:CDS 65.0%
AATGTGGGCGTCCAGGGCAC+TGG + tig0027301:23980-23999 Msa1433390:CDS 65.0%
! ATGTGGGCGTCCAGGGCACT+GGG + tig0027301:13308-13327 Msa1433390:intron 65.0%
!! GCAGGAGGTGATGGTGGTCG+TGG + tig0027301:24021-24040 Msa1433390:CDS 65.0%
!! GGTGATGGTGGTCGTGGTCG+GGG + tig0027301:24027-24046 Msa1433390:CDS 65.0%
CTCCACGCGCACCACCGTTT+CGG - tig0027301:24786-24805 None:intergenic 65.0%
GCCCTGCTTGGGCGGTCATA+AGG - tig0027301:24877-24896 None:intergenic 65.0%
GTGGACGAGCAGCCCTGCTT+GGG - tig0027301:24888-24907 None:intergenic 65.0%
CAATCTCGGGCCCGATGCCC+TGG - tig0027301:13228-13247 None:intergenic 70.0%
GATGTGGGCGTCCAGGGCAC+TGG + tig0027301:13307-13326 Msa1433390:intron 70.0%
GATGTGGCCGTCCAGGGCAC+TGG + tig0027301:13400-13419 Msa1433390:intron 70.0%
CATTCTCGGGCCCAGTGCCC+TGG - tig0027301:13414-13433 None:intergenic 70.0%
ACTGTGGGCGTCCAGGGCAC+TGG + tig0027301:13493-13512 Msa1433390:intron 70.0%
! CTGTGGGCGTCCAGGGCACT+GGG + tig0027301:13494-13513 Msa1433390:intron 70.0%
CATTCTCGGGCCCAGTGCCC+TGG - tig0027301:13414-13433 None:intergenic 70.0%
!! TGGAGGTGCTGGTGGGCACG+GGG + tig0027301:13593-13612 Msa1433390:intron 70.0%
GGTGCTCCAGGGACTGTCGC+GGG + tig0027301:17016-17035 Msa1433390:intron 70.0%
GGGTTTCCCGCGACAGTCCC+TGG - tig0027301:17025-17044 None:intergenic 70.0%
CAATCTCGGGCCCAGTGCCC+TGG - tig0027301:23994-24013 None:intergenic 70.0%
! GATGGTGGTCGTGGTCGGGG+TGG + tig0027301:24030-24049 Msa1433390:CDS 70.0%
GACCGAAACGGTGGTGCGCG+TGG + tig0027301:24781-24800 Msa1433390:CDS 70.0%
CGAAACGGTGGTGCGCGTGG+AGG + tig0027301:24784-24803 Msa1433390:CDS 70.0%
GACGAGCAGCCCTGCTTGGG+CGG - tig0027301:24885-24904 None:intergenic 70.0%
GGTGGACGAGCAGCCCTGCT+TGG - tig0027301:24889-24908 None:intergenic 70.0%
CTCGGGCCCAGTGCCCTGGA+CGG - tig0027301:13410-13429 None:intergenic 75.0%
GGTGGCCGTGGTCGGGGTAG+TGG + tig0027301:13546-13565 Msa1433390:intron 75.0%
GGTGGGCACGGGGATCGCCT+TGG + tig0027301:13603-13622 Msa1433390:intron 75.0%
GGTGGTCGTGGTCGGGGTGG+TGG + tig0027301:24033-24052 Msa1433390:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0027301 gene 13058 25191 13058 ID=Msa1433390;Name=Msa1433390
tig0027301 mRNA 13058 25191 13058 ID=Msa1433390-mRNA-1;Parent=Msa1433390;Name=Msa1433390-mRNA-1;_AED=0.21;_eAED=0.21;_QI=1818|1|1|1|0.2|0.5|6|264|252
tig0027301 exon 13058 13078 13058 ID=Msa1433390-mRNA-1:exon:8640;Parent=Msa1433390-mRNA-1
tig0027301 exon 20494 20616 20494 ID=Msa1433390-mRNA-1:exon:8641;Parent=Msa1433390-mRNA-1
tig0027301 exon 20704 20834 20704 ID=Msa1433390-mRNA-1:exon:8642;Parent=Msa1433390-mRNA-1
tig0027301 exon 21397 22978 21397 ID=Msa1433390-mRNA-1:exon:8643;Parent=Msa1433390-mRNA-1
tig0027301 exon 23730 24211 23730 ID=Msa1433390-mRNA-1:exon:8644;Parent=Msa1433390-mRNA-1
tig0027301 exon 24690 25191 24690 ID=Msa1433390-mRNA-1:exon:8645;Parent=Msa1433390-mRNA-1
tig0027301 five_prime_UTR 13058 13078 13058 ID=Msa1433390-mRNA-1:five_prime_utr;Parent=Msa1433390-mRNA-1
tig0027301 five_prime_UTR 20494 20616 20494 ID=Msa1433390-mRNA-1:five_prime_utr;Parent=Msa1433390-mRNA-1
tig0027301 five_prime_UTR 20704 20834 20704 ID=Msa1433390-mRNA-1:five_prime_utr;Parent=Msa1433390-mRNA-1
tig0027301 five_prime_UTR 21397 22939 21397 ID=Msa1433390-mRNA-1:five_prime_utr;Parent=Msa1433390-mRNA-1
tig0027301 CDS 22940 22978 22940 ID=Msa1433390-mRNA-1:cds;Parent=Msa1433390-mRNA-1
tig0027301 CDS 23730 24211 23730 ID=Msa1433390-mRNA-1:cds;Parent=Msa1433390-mRNA-1
tig0027301 CDS 24690 24927 24690 ID=Msa1433390-mRNA-1:cds;Parent=Msa1433390-mRNA-1
tig0027301 three_prime_UTR 24928 25191 24928 ID=Msa1433390-mRNA-1:three_prime_utr;Parent=Msa1433390-mRNA-1
Gene Sequence

>Msa1433390

ATGAAAACTATTCTGGTGCTTTGTCATCAGAACACAGAAATCATGATGGAAAGGGATACAGGACGACCACGTGGATTTGGGTTTATTACATTTTCAGACCGTCGGGGAATGGAGGATGCAATCAAAGAAATGGATGGACGGGAAATTGGTGATCGCATCATCTCAGTCAACAAGGCACAGCCCAGGATGGGGGGTGATGATGCAGACCAACGTTACAGAGGTGGTTTTTCTTCGGGTGGTAGGGGAAGCTATGGGGCTGGAGATAGGGTAGGACAGGATGACTGTTTCAAATGTGGGCGTCCAGGGCACTGGGCCCGAGATTGTCCTTTGGCAGGAGGTGATGGTGGTCGTGGTCGGGGTGGTGGTTCATTTTCTTCACGTCCTAGGTTTGGAGGGGATCGCCTTGGTGAACGTGAGCGATACATTGATGATCGTTATGACGGAGGACGTTATGGGGATAGGGATCGTTTAGACAACCGAGACTACAAGTATAGTGGCCGTGATCGCTATGCTAGTGACAGGTATACAACTAGTGGAGATCGATCTGCAAGTGATCGATATGGCAGTGGCTCAGACTACCCGCAAAATGGTTATGGGAAGGAAAGAGGCTATGACCGAAACGGTGGTGCGCGTGGAGGTGCTGATAGATATGGAAGCGGAATGCCAGCTCGTGATGAAGGAAGGAGTTATAGGGGTAGACCTGGTCCTTATGACCGCCCAAGCAGGGCTGCTCGTCCACCATCATTTGACCGCTACTGA
Protein sequence

>Msa1433390

MKTILVLCHQNTEIMMERDTGRPRGFGFITFSDRRGMEDAIKEMDGREIGDRIISVNKAQPRMGGDDADQRYRGGFSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPLAGGDGGRGRGGGSFSSRPRFGGDRLGERERYIDDRYDGGRYGDRDRLDNRDYKYSGRDRYASDRYTTSGDRSASDRYGSGSDYPQNGYGKERGYDRNGGARGGADRYGSGMPARDEGRSYRGRPGPYDRPSRAARPPSFDRY*