Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576130 | KEH21439.1 | 96.256 | 641 | 24 | 0 | 1 | 641 | 112 | 752 | 0.0 | 1280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576130 | A0A072TVA8 | 96.256 | 641 | 24 | 0 | 1 | 641 | 112 | 752 | 0.0 | 1280 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007080 | Msa0576130 | 0.804446 | 2.152159e-49 | -8.615850e-47 |
| Msa0058340 | Msa0576130 | 0.810552 | 1.089000e-50 | -8.615850e-47 |
| Msa0124110 | Msa0576130 | 0.812205 | 4.767112e-51 | -8.615850e-47 |
| Msa0217400 | Msa0576130 | 0.823864 | 1.100659e-53 | -8.615850e-47 |
| Msa0371420 | Msa0576130 | -0.826652 | 2.412602e-54 | -8.615850e-47 |
| Msa0448550 | Msa0576130 | -0.803377 | 3.589369e-49 | -8.615850e-47 |
| Msa0465680 | Msa0576130 | -0.849125 | 3.952665e-60 | -8.615850e-47 |
| Msa0257250 | Msa0576130 | 0.813305 | 2.738416e-51 | -8.615850e-47 |
| Msa0258760 | Msa0576130 | 0.804239 | 2.376576e-49 | -8.615850e-47 |
| Msa0296560 | Msa0576130 | 0.829960 | 3.842159e-55 | -8.615850e-47 |
| Msa0313990 | Msa0576130 | 0.806491 | 8.016554e-50 | -8.615850e-47 |
| Msa0362740 | Msa0576130 | 0.809122 | 2.211437e-50 | -8.615850e-47 |
| Msa0524890 | Msa0576130 | -0.801045 | 1.083653e-48 | -8.615850e-47 |
| Msa0528970 | Msa0576130 | 0.813427 | 2.573856e-51 | -8.615850e-47 |
| Msa0564510 | Msa0576130 | 0.805573 | 1.250384e-49 | -8.615850e-47 |
| Msa0576030 | Msa0576130 | 0.831858 | 1.315399e-55 | -8.615850e-47 |
| Msa0576070 | Msa0576130 | 0.906233 | 1.846157e-80 | -8.615850e-47 |
| Msa0576130 | Msa0578970 | 0.806923 | 6.496498e-50 | -8.615850e-47 |
| Msa0576130 | Msa0651190 | 0.807561 | 4.759093e-50 | -8.615850e-47 |
| Msa0576130 | Msa0657970 | 0.800733 | 1.254535e-48 | -8.615850e-47 |
| Msa0576130 | Msa0664850 | 0.800395 | 1.470657e-48 | -8.615850e-47 |
| Msa0576130 | Msa0697140 | 0.820688 | 6.009099e-53 | -8.615850e-47 |
| Msa0576130 | Msa0697200 | 0.802354 | 5.837973e-49 | -8.615850e-47 |
| Msa0576130 | Msa0715720 | 0.802489 | 5.475389e-49 | -8.615850e-47 |
| Msa0576130 | Msa0722930 | 0.800924 | 1.147089e-48 | -8.615850e-47 |
| Msa0576130 | Msa0757950 | 0.819848 | 9.362624e-53 | -8.615850e-47 |
| Msa0576130 | Msa0767080 | 0.822065 | 2.891737e-53 | -8.615850e-47 |
| Msa0576130 | Msa0810480 | 0.814454 | 1.528352e-51 | -8.615850e-47 |
| Msa0576130 | Msa0839330 | 0.822243 | 2.628516e-53 | -8.615850e-47 |
| Msa0576130 | Msa0844900 | 0.831030 | 2.102462e-55 | -8.615850e-47 |
| Msa0576130 | Msa0846810 | 0.812167 | 4.857614e-51 | -8.615850e-47 |
| Msa0576130 | Msa0900200 | 0.822627 | 2.141205e-53 | -8.615850e-47 |
| Msa0576130 | Msa0965520 | 0.834678 | 2.608429e-56 | -8.615850e-47 |
| Msa0576130 | Msa1000020 | 0.802364 | 5.810144e-49 | -8.615850e-47 |
| Msa0576130 | Msa1068200 | -0.824043 | 9.996856e-54 | -8.615850e-47 |
| Msa0576130 | Msa1083410 | 0.817071 | 3.988312e-52 | -8.615850e-47 |
| Msa0576130 | Msa1085620 | 0.971190 | 8.931598e-133 | -8.615850e-47 |
| Msa0576130 | Msa1098560 | 0.802845 | 4.625002e-49 | -8.615850e-47 |
| Msa0576130 | Msa1104000 | 0.801732 | 7.836605e-49 | -8.615850e-47 |
| Msa0576130 | Msa1156340 | -0.814195 | 1.743488e-51 | -8.615850e-47 |
| Msa0576130 | Msa1269080 | 0.811993 | 5.300789e-51 | -8.615850e-47 |
| Msa0576130 | Msa1271300 | 0.809652 | 1.701990e-50 | -8.615850e-47 |
| Msa0576130 | Msa1278840 | 0.830762 | 2.445883e-55 | -8.615850e-47 |
| Msa0576130 | Msa1322890 | 0.815307 | 9.884186e-52 | -8.615850e-47 |
| Msa0576130 | Msa1343320 | 0.800027 | 1.747360e-48 | -8.615850e-47 |
| Msa0576130 | Msa1393040 | 0.813956 | 1.968888e-51 | -8.615850e-47 |
| Msa0576130 | Msa1414740 | 0.812503 | 4.102765e-51 | -8.615850e-47 |
| Msa0576130 | Msa1445030 | 0.802772 | 4.786756e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576130 | MtrunA17_Chr8g0393331 | 96.256 | 641 | 24 | 0 | 1 | 641 | 238 | 878 | 0.0 | 1280 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576130 | AT5G42710.3 | 38.627 | 233 | 124 | 7 | 411 | 634 | 580 | 802 | 6.25e-37 | 147 |
| Msa0576130 | AT5G42710.1 | 38.627 | 233 | 124 | 7 | 411 | 634 | 581 | 803 | 6.68e-37 | 147 |
| Msa0576130 | AT5G42710.2 | 41.579 | 190 | 99 | 4 | 449 | 634 | 618 | 799 | 6.97e-37 | 147 |
Find 218 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCACCGTCTCCCCATTTC+TGG | 0.144963 | 4_1:+80204949 | None:intergenic |
| CATGGCCGATTCTGAGATTT+TGG | 0.147923 | 4_1:-80202115 | Msa0576130:three_prime_UTR |
| GTCTATCACCAATTCAATTC+TGG | 0.162771 | 4_1:-80204813 | Msa0576130:five_prime_UTR |
| CTTCTTCTTCTGAAGATTAT+TGG | 0.168911 | 4_1:+80203630 | None:intergenic |
| CATTTCTCTCCCTCCGTCTT+TGG | 0.197688 | 4_1:+80203681 | None:intergenic |
| CCTAGTGCGAACCTATAATT+TGG | 0.209106 | 4_1:-80202089 | Msa0576130:three_prime_UTR |
| CGTTCAAATTCTTGATATCT+TGG | 0.249218 | 4_1:+80203496 | None:intergenic |
| ACTTCTACGTTATACAATTC+TGG | 0.266269 | 4_1:-80203280 | Msa0576130:CDS |
| TCACAGTCACTGCTAAATTA+TGG | 0.270963 | 4_1:-80205946 | Msa0576130:five_prime_UTR |
| AAACCACCTCAAGTGGATTT+TGG | 0.277541 | 4_1:-80202805 | Msa0576130:CDS |
| CTTGAATGTGCAATATTCTT+TGG | 0.280321 | 4_1:+80202305 | None:intergenic |
| CCATTCTTCCCCTTTGAATC+TGG | 0.291776 | 4_1:+80204780 | None:intergenic |
| ATAGATTGCATGTGGGATTT+AGG | 0.293282 | 4_1:-80202420 | Msa0576130:CDS |
| GCATATTCTTAGTATACTTC+TGG | 0.301252 | 4_1:-80202337 | Msa0576130:CDS |
| TTAGTTAGGACCCAAATTAT+AGG | 0.311223 | 4_1:+80202078 | None:intergenic |
| CACTTTCTGTTAGTGGTTGT+TGG | 0.315572 | 4_1:+80202829 | None:intergenic |
| GTTTCCTTTGGCAGAGTGTT+TGG | 0.323736 | 4_1:+80204164 | None:intergenic |
| CTAATATCAGCTTGCTACTT+TGG | 0.326090 | 4_1:+80202688 | None:intergenic |
| AACAGCTTGATCTTGCAAAT+TGG | 0.326245 | 4_1:+80203046 | None:intergenic |
| ACAAGAATCGGCCAATGATT+TGG | 0.326499 | 4_1:-80203242 | Msa0576130:intron |
| GTAAAGGACAGAAGTATAAA+TGG | 0.329098 | 4_1:-80203868 | Msa0576130:CDS |
| TACATATATATTTATTAGTT+AGG | 0.334426 | 4_1:+80202064 | None:intergenic |
| ATATCATGCTCAAGCATCTT+AGG | 0.336104 | 4_1:+80202462 | None:intergenic |
| ATTAGTTTGGCTATTACGTT+TGG | 0.339628 | 4_1:+80204243 | None:intergenic |
| TCTATCACCAATTCAATTCT+GGG | 0.348290 | 4_1:-80204812 | Msa0576130:five_prime_UTR |
| TCCTTCCCTTGTCGGCCATC+TGG | 0.352183 | 4_1:+80204268 | None:intergenic |
| CAGAGTAATAGGCAGACTTT+TGG | 0.355845 | 4_1:+80204022 | None:intergenic |
| TAGCAGTGACTGTGACAAAA+TGG | 0.358542 | 4_1:+80205954 | None:intergenic |
| GTTCAAATTCTTGATATCTT+GGG | 0.359126 | 4_1:+80203497 | None:intergenic |
| CACCTCAGACTCAGAGTAAT+AGG | 0.360186 | 4_1:+80204011 | None:intergenic |
| CAAGAATTTGAACGAGCTAA+TGG | 0.362281 | 4_1:-80203487 | Msa0576130:CDS |
| TTGTCGAAGGCTTTCCCATA+TGG | 0.368196 | 4_1:+80204866 | None:intergenic |
| GTTTAATATCACAGGAGTTC+AGG | 0.368579 | 4_1:-80202895 | Msa0576130:intron |
| ATTACAAGGAGCTATTGATT+TGG | 0.375060 | 4_1:-80204588 | Msa0576130:five_prime_UTR |
| TCAAATCAGATTATCCCATA+TGG | 0.376318 | 4_1:-80204881 | Msa0576130:five_prime_UTR |
| TTCGTTGTAAAGTTTGTAAC+TGG | 0.377156 | 4_1:-80202218 | Msa0576130:three_prime_UTR |
| GGGAAAGCCTTCGACAATAA+TGG | 0.379352 | 4_1:-80204860 | Msa0576130:five_prime_UTR |
| AAACGTAATAGCCAAACTAA+TGG | 0.382024 | 4_1:-80204241 | Msa0576130:CDS |
| GTTGTCCAGTCCCATTAGTT+TGG | 0.387006 | 4_1:+80204230 | None:intergenic |
| ACTGGCACGTCCAACTTTCT+CGG | 0.389646 | 4_1:-80204409 | Msa0576130:CDS |
| TGTGGTGCTGCTGTTTCCTT+TGG | 0.391116 | 4_1:+80204152 | None:intergenic |
| CAATCCTACCATTTGCCTAT+AGG | 0.395273 | 4_1:-80205828 | Msa0576130:intron |
| TGCAGGTTAGTTCCAGAAAT+GGG | 0.405496 | 4_1:-80204961 | Msa0576130:intron |
| TGACCCTCTGTAGGTTTGCT+TGG | 0.406588 | 4_1:+80205096 | None:intergenic |
| GTTTGGAATCCTTCCCTTGT+CGG | 0.407895 | 4_1:+80204260 | None:intergenic |
| CTGCAGGTTAGTTCCAGAAA+TGG | 0.409872 | 4_1:-80204962 | Msa0576130:intron |
| ATTGCATGTGGGATTTAGGT+TGG | 0.411296 | 4_1:-80202416 | Msa0576130:CDS |
| AATTACAATCACTAACTCTA+AGG | 0.416083 | 4_1:-80204364 | Msa0576130:CDS |
| GAAGCTAGTGGTAGAGCATC+TGG | 0.418516 | 4_1:-80203373 | Msa0576130:CDS |
| GGTGATGATGGGAAGGAAAC+AGG | 0.422219 | 4_1:-80203914 | Msa0576130:CDS |
| GAGTGGAGATTTACAAGAAT+CGG | 0.422961 | 4_1:-80203254 | Msa0576130:CDS |
| AAGGAAACCCAGAATTGAAT+TGG | 0.430418 | 4_1:+80204805 | None:intergenic |
| GTTTAGTTTCTGTGCACCTT+TGG | 0.430961 | 4_1:+80204682 | None:intergenic |
| TTCTCAATGATCTGCGTGTA+AGG | 0.434249 | 4_1:-80205896 | Msa0576130:five_prime_UTR |
| ATCCCGTTTGGCATTCTTCA+AGG | 0.435621 | 4_1:-80202732 | Msa0576130:CDS |
| AACGTAATAGCCAAACTAAT+GGG | 0.436410 | 4_1:-80204240 | Msa0576130:CDS |
| AAATGTTTATGGAAATTATG+AGG | 0.440031 | 4_1:+80205979 | None:intergenic |
| TTTACAGTGCCACTGTTATG+TGG | 0.441562 | 4_1:+80203886 | None:intergenic |
| TTCCTATCGGTTGCACAGCT+TGG | 0.442222 | 4_1:+80203069 | None:intergenic |
| CAAAGAATATTGCACATTCA+AGG | 0.442613 | 4_1:-80202304 | Msa0576130:CDS |
| TGTCGAAGGCTTTCCCATAT+GGG | 0.443080 | 4_1:+80204867 | None:intergenic |
| AGGAGGAGGAGGAGAAGAGG+AGG | 0.449880 | 4_1:-80204469 | Msa0576130:five_prime_UTR |
| CCTTCCTGAGAAGAAGGGTT+CGG | 0.452402 | 4_1:-80204208 | Msa0576130:CDS |
| AGAAGATGAGAGGAGGAGGA+TGG | 0.452891 | 4_1:-80204442 | Msa0576130:exon |
| CTTCCTGAGAAGAAGGGTTC+GGG | 0.453780 | 4_1:-80204207 | Msa0576130:CDS |
| TCCTTCAAAACCATGATGTT+TGG | 0.453949 | 4_1:-80204075 | Msa0576130:CDS |
| AATACTGAAACAGATGCATA+TGG | 0.455160 | 4_1:-80205124 | Msa0576130:intron |
| TTCAGACTAAACATCCCGTT+TGG | 0.459991 | 4_1:-80202744 | Msa0576130:CDS |
| AATCCCTCATGTGCTGCCTC+AGG | 0.463413 | 4_1:+80203023 | None:intergenic |
| CTATAGGCAAATGGTAGGAT+TGG | 0.464033 | 4_1:+80205829 | None:intergenic |
| TACCTTGAAGAATGCCAAAC+GGG | 0.467904 | 4_1:+80202730 | None:intergenic |
| CTTCTTCTGAAGATTATTGG+TGG | 0.468168 | 4_1:+80203633 | None:intergenic |
| AGGAGGAGGAGAAGAGGAGG+AGG | 0.468731 | 4_1:-80204466 | Msa0576130:five_prime_UTR |
| GTCAGTGCTTACCAAATCAT+TGG | 0.470502 | 4_1:+80203231 | None:intergenic |
| CCAGATTCAAAGGGGAAGAA+TGG | 0.472715 | 4_1:-80204780 | Msa0576130:five_prime_UTR |
| TTTATGGTATGCAACTTCAC+TGG | 0.473868 | 4_1:+80202995 | None:intergenic |
| AGGTAGAAGATGAGAGGAGG+AGG | 0.474114 | 4_1:-80204446 | Msa0576130:five_prime_UTR |
| GGCCATCTGGTTTGAAATGT+CGG | 0.476301 | 4_1:+80204281 | None:intergenic |
| TTACCCGAACCCTTCTTCTC+AGG | 0.477171 | 4_1:+80204204 | None:intergenic |
| GGCCTCCAAAATCTCAGAAT+CGG | 0.478286 | 4_1:+80202110 | None:intergenic |
| AGCAGAATCGTTGATGATGC+TGG | 0.478498 | 4_1:+80203954 | None:intergenic |
| GGAAAATTGAATGTCTTGAA+TGG | 0.478536 | 4_1:-80203352 | Msa0576130:CDS |
| GAAATGGGGAGACGGTGAAT+TGG | 0.482187 | 4_1:-80204946 | Msa0576130:five_prime_UTR |
| TTCAAATTCTTGATATCTTG+GGG | 0.482601 | 4_1:+80203498 | None:intergenic |
| TGTATTTGTTGACCCTCTGT+AGG | 0.484598 | 4_1:+80205087 | None:intergenic |
| AACAAATACAAGAGCAAATG+AGG | 0.485283 | 4_1:-80205074 | Msa0576130:five_prime_UTR |
| AAATTATGTTGAGGTGATGA+TGG | 0.485397 | 4_1:-80203926 | Msa0576130:CDS |
| GCCATTCAAATTGCAAAAGA+AGG | 0.489982 | 4_1:-80203787 | Msa0576130:CDS |
| ATATCTTGAACGGCGTGGGT+TGG | 0.491612 | 4_1:+80203590 | None:intergenic |
| TGTATCCATGTTAACACCAT+TGG | 0.491658 | 4_1:+80204637 | None:intergenic |
| CAAATCAGATTATCCCATAT+GGG | 0.493768 | 4_1:-80204880 | Msa0576130:five_prime_UTR |
| TTCCCCTTTGAATCTGGTGA+AGG | 0.495898 | 4_1:+80204786 | None:intergenic |
| TCCCACATGCAATCTATGTC+AGG | 0.502894 | 4_1:+80202426 | None:intergenic |
| CCAAATTATAGGTTCGCACT+AGG | 0.502939 | 4_1:+80202089 | None:intergenic |
| CAAAGGGGAAGAATGGATAG+AGG | 0.503785 | 4_1:-80204773 | Msa0576130:five_prime_UTR |
| AGGAGTTCAGGAAGACAGAA+TGG | 0.504166 | 4_1:-80202883 | Msa0576130:CDS |
| ATCTGGACCACCAAACATCA+TGG | 0.505621 | 4_1:+80204065 | None:intergenic |
| GGACAACCTTCCTGAGAAGA+AGG | 0.506952 | 4_1:-80204214 | Msa0576130:CDS |
| TCTGTTCAAGAGAGAGGGTA+TGG | 0.508062 | 4_1:+80204717 | None:intergenic |
| TGTTACTACCTATAGGCAAA+TGG | 0.511737 | 4_1:+80205820 | None:intergenic |
| CACACTATTAGAAGAGGAGG+AGG | 0.511782 | 4_1:-80204483 | Msa0576130:five_prime_UTR |
| TTTCCTTCACCAGATTCAAA+GGG | 0.513731 | 4_1:-80204789 | Msa0576130:five_prime_UTR |
| TCTTGCAAATTGGTTCCTAT+CGG | 0.513990 | 4_1:+80203056 | None:intergenic |
| GGTTGGAATAAAAGCATTGA+AGG | 0.514197 | 4_1:-80203989 | Msa0576130:CDS |
| TGAGAGGGTACTATCAGAGT+TGG | 0.514961 | 4_1:+80206038 | None:intergenic |
| TTATGGAAATTATGAGGTGC+TGG | 0.517044 | 4_1:+80205985 | None:intergenic |
| GAGGATGGAGAAAATGCAAC+TGG | 0.520795 | 4_1:-80204427 | Msa0576130:exon |
| TTTCCCTCCATTATTGTCGA+AGG | 0.521178 | 4_1:+80204853 | None:intergenic |
| TTCAAAACCATGATGTTTGG+TGG | 0.521517 | 4_1:-80204072 | Msa0576130:CDS |
| GTTTCCTTCACCAGATTCAA+AGG | 0.521691 | 4_1:-80204790 | Msa0576130:five_prime_UTR |
| CAGAGATCAGTAAAGAGTGC+AGG | 0.521851 | 4_1:-80204911 | Msa0576130:five_prime_UTR |
| TACTCTGAGTCTGAGGTGGT+TGG | 0.522744 | 4_1:-80204006 | Msa0576130:CDS |
| ACCAGATGGCCGACAAGGGA+AGG | 0.523601 | 4_1:-80204269 | Msa0576130:CDS |
| TATGAAGTGATGAAAAGAAA+GGG | 0.524717 | 4_1:-80202657 | Msa0576130:CDS |
| TGTTCCTGAGGCAGCACATG+AGG | 0.526845 | 4_1:-80203027 | Msa0576130:CDS |
| ACATAACAGTGGCACTGTAA+AGG | 0.527849 | 4_1:-80203884 | Msa0576130:CDS |
| TCAGAGTTGGGTGAGGGGTG+AGG | 0.528078 | 4_1:+80206051 | None:intergenic |
| ACTATTAGAAGAGGAGGAGG+AGG | 0.529138 | 4_1:-80204480 | Msa0576130:five_prime_UTR |
| TAAACAATGAAAAGAAGTCT+CGG | 0.530341 | 4_1:-80203735 | Msa0576130:CDS |
| AATGGATAGAGGAAGCAACT+TGG | 0.530831 | 4_1:-80204762 | Msa0576130:five_prime_UTR |
| CTAGTGCGAACCTATAATTT+GGG | 0.531518 | 4_1:-80202088 | Msa0576130:three_prime_UTR |
| TTATAGTAACTTAATAAAGG+AGG | 0.532615 | 4_1:+80202152 | None:intergenic |
| CGTTTATCTGTTCAAGAGAG+AGG | 0.533389 | 4_1:+80204711 | None:intergenic |
| AAAGTGAAAACCACCTCAAG+TGG | 0.534061 | 4_1:-80202812 | Msa0576130:CDS |
| AGCAGCAAGCTCTCAATATG+TGG | 0.534625 | 4_1:+80204660 | None:intergenic |
| TTCAAACCAGATGGCCGACA+AGG | 0.536635 | 4_1:-80204274 | Msa0576130:CDS |
| ATAATGGAGGGAAACTAAGA+AGG | 0.537616 | 4_1:-80204844 | Msa0576130:five_prime_UTR |
| ATTGATTTGGAAGAGTCGCT+TGG | 0.539040 | 4_1:-80204575 | Msa0576130:five_prime_UTR |
| CTGCTCCAATGGTGTTAACA+TGG | 0.539988 | 4_1:-80204642 | Msa0576130:five_prime_UTR |
| GGACGTAGAAGAGGAGAAGG+GGG | 0.544331 | 4_1:+80206007 | None:intergenic |
| AAACAATGAAAAGAAGTCTC+GGG | 0.549597 | 4_1:-80203734 | Msa0576130:CDS |
| TTGAGAGCTTGCTGCTCCAA+TGG | 0.550574 | 4_1:-80204653 | Msa0576130:five_prime_UTR |
| AGGAGGAGGTAGAAGATGAG+AGG | 0.550786 | 4_1:-80204452 | Msa0576130:five_prime_UTR |
| ATAGAGGAAGCAACTTGGAC+AGG | 0.552642 | 4_1:-80204757 | Msa0576130:five_prime_UTR |
| GAGAGGGTACTATCAGAGTT+GGG | 0.553446 | 4_1:+80206039 | None:intergenic |
| ATGGAGAAGATTAAATTCTA+CGG | 0.554997 | 4_1:-80202525 | Msa0576130:CDS |
| TGATGAAAAGAAAGGGGATA+CGG | 0.559049 | 4_1:-80202650 | Msa0576130:CDS |
| GATAAGATCTCTAGATGACT+TGG | 0.560395 | 4_1:-80202568 | Msa0576130:CDS |
| TAAGAAGCTGAACGAGGACA+TGG | 0.560558 | 4_1:-80202544 | Msa0576130:CDS |
| TACTATCAGAGTTGGGTGAG+GGG | 0.562657 | 4_1:+80206046 | None:intergenic |
| CATGCTCAAGCATCTTAGGC+AGG | 0.564457 | 4_1:+80202466 | None:intergenic |
| AATAGCCAAACTAATGGGAC+TGG | 0.564475 | 4_1:-80204235 | Msa0576130:CDS |
| GTACTATCAGAGTTGGGTGA+GGG | 0.564825 | 4_1:+80206045 | None:intergenic |
| CTATGAAGTGATGAAAAGAA+AGG | 0.565972 | 4_1:-80202658 | Msa0576130:CDS |
| CCGAACCCTTCTTCTCAGGA+AGG | 0.566132 | 4_1:+80204208 | None:intergenic |
| TTTGCAAAGGAACTATTACA+AGG | 0.566481 | 4_1:-80204602 | Msa0576130:five_prime_UTR |
| GGTACTATCAGAGTTGGGTG+AGG | 0.566782 | 4_1:+80206044 | None:intergenic |
| CTGGGACGTAGAAGAGGAGA+AGG | 0.569234 | 4_1:+80206004 | None:intergenic |
| TTACCTTGAAGAATGCCAAA+CGG | 0.573864 | 4_1:+80202729 | None:intergenic |
| GAATTGTATAACGTAGAAGT+AGG | 0.577863 | 4_1:+80203283 | None:intergenic |
| AGCATTGAAGGGCTTTGACA+AGG | 0.578051 | 4_1:-80203977 | Msa0576130:CDS |
| GTTTATCTGTTCAAGAGAGA+GGG | 0.579779 | 4_1:+80204712 | None:intergenic |
| TGCCTATTACTCTGAGTCTG+AGG | 0.579876 | 4_1:-80204013 | Msa0576130:CDS |
| ACTAAAAGATCATAAATTCG+TGG | 0.580506 | 4_1:-80203455 | Msa0576130:CDS |
| CGGTGAATTGGTCTAGCAGA+AGG | 0.582158 | 4_1:-80204934 | Msa0576130:five_prime_UTR |
| CGTGATATCTTGAACGGCGT+GGG | 0.582273 | 4_1:+80203586 | None:intergenic |
| GAAAAGAAAGGGGATACGGC+AGG | 0.585244 | 4_1:-80202646 | Msa0576130:CDS |
| AGGAGGTAGAAGATGAGAGG+AGG | 0.587972 | 4_1:-80204449 | Msa0576130:five_prime_UTR |
| TGCTCGTCAAAATTATGTTG+AGG | 0.588454 | 4_1:-80203935 | Msa0576130:CDS |
| TGAATTGGTGATAGACAGAT+CGG | 0.588623 | 4_1:+80204820 | None:intergenic |
| TTATACAATTCTGGCAAGAG+TGG | 0.589766 | 4_1:-80203271 | Msa0576130:CDS |
| GGAGTTCAGGAAGACAGAAT+GGG | 0.593117 | 4_1:-80202882 | Msa0576130:CDS |
| TTGTTGTCAACCGAGAAAGT+TGG | 0.593265 | 4_1:+80204399 | None:intergenic |
| TCATCCAAACACTCTGCCAA+AGG | 0.594757 | 4_1:-80204168 | Msa0576130:CDS |
| GGGACGTAGAAGAGGAGAAG+GGG | 0.597161 | 4_1:+80206006 | None:intergenic |
| TTACAGTGCCACTGTTATGT+GGG | 0.598348 | 4_1:+80203887 | None:intergenic |
| GTTACTATAAAACTTTAACA+TGG | 0.598403 | 4_1:-80202139 | Msa0576130:three_prime_UTR |
| AAGTCAATTATCTCCAAAGA+CGG | 0.601222 | 4_1:-80203694 | Msa0576130:CDS |
| AGAAGATTAAATTCTACGGA+AGG | 0.603033 | 4_1:-80202521 | Msa0576130:CDS |
| GAGGTGCTGGGACGTAGAAG+AGG | 0.603215 | 4_1:+80205998 | None:intergenic |
| TCGAATCACACTATTAGAAG+AGG | 0.604609 | 4_1:-80204489 | Msa0576130:five_prime_UTR |
| TGACCAAAATCCACTTGAGG+TGG | 0.604873 | 4_1:+80202802 | None:intergenic |
| TGTAAAGTTTGTAACTGGTG+AGG | 0.605802 | 4_1:-80202213 | Msa0576130:three_prime_UTR |
| GAGTAGCAAAGTTGATGTTG+AGG | 0.606782 | 4_1:-80202493 | Msa0576130:CDS |
| TGCCGACATTTCAAACCAGA+TGG | 0.612171 | 4_1:-80204283 | Msa0576130:CDS |
| TAATGGAGGGAAACTAAGAA+GGG | 0.613649 | 4_1:-80204843 | Msa0576130:five_prime_UTR |
| TCAAACCAGATGGCCGACAA+GGG | 0.617070 | 4_1:-80204273 | Msa0576130:CDS |
| TGGGACGTAGAAGAGGAGAA+GGG | 0.619089 | 4_1:+80206005 | None:intergenic |
| AATTATGTTGAGGTGATGAT+GGG | 0.619461 | 4_1:-80203925 | Msa0576130:CDS |
| AAATTCTTGATATCTTGGGG+AGG | 0.620045 | 4_1:+80203501 | None:intergenic |
| ACGTGATATCTTGAACGGCG+TGG | 0.620192 | 4_1:+80203585 | None:intergenic |
| ATGAAGTGATGAAAAGAAAG+GGG | 0.620260 | 4_1:-80202656 | Msa0576130:CDS |
| GCGTGTAAGGAAAGAACGAA+TGG | 0.620983 | 4_1:-80205883 | Msa0576130:five_prime_UTR |
| AGAGTCGCTTGGAATGCTAG+TGG | 0.621270 | 4_1:-80204564 | Msa0576130:five_prime_UTR |
| TGTTTGTTTGCTCTTCAGTG+TGG | 0.623538 | 4_1:+80204134 | None:intergenic |
| CTATTACTCTGAGTCTGAGG+TGG | 0.623717 | 4_1:-80204010 | Msa0576130:CDS |
| TATGGAAATTATGAGGTGCT+GGG | 0.627230 | 4_1:+80205986 | None:intergenic |
| CAGATAAACGAGATATCCAA+AGG | 0.627336 | 4_1:-80204698 | Msa0576130:five_prime_UTR |
| AAAGCCTTCGACAATAATGG+AGG | 0.627560 | 4_1:-80204857 | Msa0576130:five_prime_UTR |
| AATCACACTATTAGAAGAGG+AGG | 0.627745 | 4_1:-80204486 | Msa0576130:five_prime_UTR |
| GTTGGAATAAAAGCATTGAA+GGG | 0.628624 | 4_1:-80203988 | Msa0576130:CDS |
| GTTCCTGAGGCAGCACATGA+GGG | 0.628945 | 4_1:-80203026 | Msa0576130:CDS |
| TCACCACGTGATATCTTGAA+CGG | 0.629156 | 4_1:+80203580 | None:intergenic |
| AAGCGAACATCAACTAACAC+TGG | 0.631582 | 4_1:-80204312 | Msa0576130:CDS |
| ATGTTGAGGTGATGATGGGA+AGG | 0.632854 | 4_1:-80203921 | Msa0576130:CDS |
| CAATTATCTCCAAAGACGGA+GGG | 0.635481 | 4_1:-80203690 | Msa0576130:CDS |
| GACAACCTTCCTGAGAAGAA+GGG | 0.635656 | 4_1:-80204213 | Msa0576130:CDS |
| TAGTTCCAGAAATGGGGAGA+CGG | 0.635790 | 4_1:-80204954 | Msa0576130:five_prime_UTR |
| TCAATTATCTCCAAAGACGG+AGG | 0.637204 | 4_1:-80203691 | Msa0576130:CDS |
| GCAAGATCAAGCTGTTCCTG+AGG | 0.637648 | 4_1:-80203039 | Msa0576130:CDS |
| AGAAATGAACAAGAAGCTAG+TGG | 0.637949 | 4_1:-80203385 | Msa0576130:CDS |
| ACTACCTATAGGCAAATGGT+AGG | 0.640273 | 4_1:+80205824 | None:intergenic |
| GGCCTGACATAGATTGCATG+TGG | 0.647566 | 4_1:-80202428 | Msa0576130:CDS |
| AGCAAGCTGATATTAGATTG+CGG | 0.654345 | 4_1:-80202681 | Msa0576130:CDS |
| TACACCAAGCAAACCTACAG+AGG | 0.655062 | 4_1:-80205100 | Msa0576130:five_prime_UTR |
| AAGCCTTCGACAATAATGGA+GGG | 0.655744 | 4_1:-80204856 | Msa0576130:five_prime_UTR |
| ATAAAACTTTAACATGGACA+TGG | 0.663681 | 4_1:-80202133 | Msa0576130:three_prime_UTR |
| GCAGGTTAGTTCCAGAAATG+GGG | 0.665078 | 4_1:-80204960 | Msa0576130:intron |
| TACCAAGCTGTGCAACCGAT+AGG | 0.665962 | 4_1:-80203071 | Msa0576130:CDS |
| GACGTAGAAGAGGAGAAGGG+GGG | 0.666514 | 4_1:+80206008 | None:intergenic |
| ACACCAAGCAAACCTACAGA+GGG | 0.682351 | 4_1:-80205099 | Msa0576130:five_prime_UTR |
| GAAAGATAAAAGATTCTCAG+CGG | 0.691703 | 4_1:-80204335 | Msa0576130:CDS |
| TTCCTTCACCAGATTCAAAG+GGG | 0.696874 | 4_1:-80204788 | Msa0576130:five_prime_UTR |
| CTTGGTTAAGAAGCTGAACG+AGG | 0.698158 | 4_1:-80202550 | Msa0576130:CDS |
| TCGTGACCAAAATCCACTTG+AGG | 0.699292 | 4_1:+80202799 | None:intergenic |
| GCCTGACATAGATTGCATGT+GGG | 0.711274 | 4_1:-80202427 | Msa0576130:CDS |
| CAGGATCACCCACATAACAG+TGG | 0.731848 | 4_1:-80203895 | Msa0576130:CDS |
| ACGCCGTTCAAGATATCACG+TGG | 0.736213 | 4_1:-80203583 | Msa0576130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATATATATTTATTAGTT+AGG | + | chr4_1:80206040-80206059 | None:intergenic | 10.0% |
| !! | ATCATTAATTAAATATACTG+TGG | + | chr4_1:80202546-80202565 | None:intergenic | 15.0% |
| !!! | ATGTTATTTAGATTTTGAAA+TGG | + | chr4_1:80204266-80204285 | None:intergenic | 15.0% |
| !! | AAATTAAGTTCAACAAAAAA+GGG | + | chr4_1:80204998-80205017 | None:intergenic | 15.0% |
| !!! | GTTTTATAGTAACTTAATAA+AGG | + | chr4_1:80205955-80205974 | None:intergenic | 15.0% |
| !! | AAATGTTTATGGAAATTATG+AGG | + | chr4_1:80202125-80202144 | None:intergenic | 20.0% |
| !! | ACAAAATGGAAAAATGTTTA+TGG | + | chr4_1:80202136-80202155 | None:intergenic | 20.0% |
| !! | TTGTTTATTTCATCATTTCA+AGG | + | chr4_1:80202742-80202761 | None:intergenic | 20.0% |
| !! | ACAATATTAGTCATGTATAT+TGG | + | chr4_1:80202798-80202817 | None:intergenic | 20.0% |
| !!! | ATATTCATTAACTTTTGCAA+AGG | - | chr4_1:80203486-80203505 | Msa0576130:CDS | 20.0% |
| !! | TATGTTCATATGACATAAAT+TGG | + | chr4_1:80204915-80204934 | None:intergenic | 20.0% |
| !! | CAAATTAAGTTCAACAAAAA+AGG | + | chr4_1:80204999-80205018 | None:intergenic | 20.0% |
| !! | TACCATAAAAGAAAAACAAA+TGG | - | chr4_1:80205120-80205139 | Msa0576130:intron | 20.0% |
| !! | TCGAAAAATATGATGTTATA+AGG | - | chr4_1:80205730-80205749 | Msa0576130:intron | 20.0% |
| !! | CGAAAAATATGATGTTATAA+GGG | - | chr4_1:80205731-80205750 | Msa0576130:intron | 20.0% |
| !! | ACATAAAAACTTTCATAGTA+TGG | + | chr4_1:80205844-80205863 | None:intergenic | 20.0% |
| !! | TTATAGTAACTTAATAAAGG+AGG | + | chr4_1:80205952-80205971 | None:intergenic | 20.0% |
| !! | GTTACTATAAAACTTTAACA+TGG | - | chr4_1:80205962-80205981 | Msa0576130:five_prime_UTR | 20.0% |
| ! | CTATGAAATTGTTGTATGAA+TGG | + | chr4_1:80202329-80202348 | None:intergenic | 25.0% |
| !!! | GAGCCATTTTATTAATCTTT+TGG | - | chr4_1:80202371-80202390 | Msa0576130:CDS | 25.0% |
| ! | GTGCCAAAAGATTAATAAAA+TGG | + | chr4_1:80202377-80202396 | None:intergenic | 25.0% |
| ! | CAAAACCATTAATTCAAATG+AGG | - | chr4_1:80202675-80202694 | Msa0576130:CDS | 25.0% |
| !!! | TTTCAGTATTTTGGCAAAAT+TGG | + | chr4_1:80202967-80202986 | None:intergenic | 25.0% |
| ! | AATTACAATCACTAACTCTA+AGG | - | chr4_1:80203737-80203756 | Msa0576130:CDS | 25.0% |
| ! | TTTGATCAAAAACCAAAAAG+TGG | - | chr4_1:80203995-80204014 | Msa0576130:CDS | 25.0% |
| ! | TAAACAATGAAAAGAAGTCT+CGG | - | chr4_1:80204366-80204385 | Msa0576130:CDS | 25.0% |
| ! | TTCAAATTCTTGATATCTTG+GGG | + | chr4_1:80204606-80204625 | None:intergenic | 25.0% |
| ! | GTTCAAATTCTTGATATCTT+GGG | + | chr4_1:80204607-80204626 | None:intergenic | 25.0% |
| ! | ACTAAAAGATCATAAATTCG+TGG | - | chr4_1:80204646-80204665 | Msa0576130:five_prime_UTR | 25.0% |
| !!! | TGAATATGCTAAACCTTTTT+TGG | + | chr4_1:80204781-80204800 | None:intergenic | 25.0% |
| !!! | CACCATTTGTTTTTCTTTTA+TGG | + | chr4_1:80205125-80205144 | None:intergenic | 25.0% |
| ! | TGAGTATAACTAACTAAACA+CGG | - | chr4_1:80205143-80205162 | Msa0576130:intron | 25.0% |
| ! | TATGAAGTGATGAAAAGAAA+GGG | - | chr4_1:80205444-80205463 | Msa0576130:intron | 25.0% |
| ! | ATGGAGAAGATTAAATTCTA+CGG | - | chr4_1:80205576-80205595 | Msa0576130:intron | 25.0% |
| ! | AGCATGATATCTATGAAAAA+TGG | - | chr4_1:80205652-80205671 | Msa0576130:intron | 25.0% |
| ! | ATAAAACTTTAACATGGACA+TGG | - | chr4_1:80205968-80205987 | Msa0576130:five_prime_UTR | 25.0% |
| CTGAAAATGTTACTACCTAT+AGG | + | chr4_1:80202291-80202310 | None:intergenic | 30.0% | |
| GCAAGATGAAATATCTTGTT+TGG | + | chr4_1:80202480-80202499 | None:intergenic | 30.0% | |
| ATCTTGCTCTACATTAATTG+AGG | - | chr4_1:80202493-80202512 | Msa0576130:CDS | 30.0% | |
| TCTTGCTCTACATTAATTGA+GGG | - | chr4_1:80202494-80202513 | Msa0576130:CDS | 30.0% | |
| GAATGCCTCATTTGAATTAA+TGG | + | chr4_1:80202683-80202702 | None:intergenic | 30.0% | |
| !! | CTAGTTCTAGTTGTTGAAAA+AGG | + | chr4_1:80202770-80202789 | None:intergenic | 30.0% |
| ! | ATTGTGATTTGAGATTTCGA+TGG | - | chr4_1:80202813-80202832 | Msa0576130:CDS | 30.0% |
| ! | ATGCATCTGTTTCAGTATTT+TGG | + | chr4_1:80202976-80202995 | None:intergenic | 30.0% |
| AATACTGAAACAGATGCATA+TGG | - | chr4_1:80202977-80202996 | Msa0576130:intron | 30.0% | |
| AACAAATACAAGAGCAAATG+AGG | - | chr4_1:80203027-80203046 | Msa0576130:CDS | 30.0% | |
| ATGAGGTTGTAAGTAATGTT+TGG | - | chr4_1:80203044-80203063 | Msa0576130:CDS | 30.0% | |
| TATAAATAGCAGAGTTGTGT+TGG | - | chr4_1:80203080-80203099 | Msa0576130:intron | 30.0% | |
| GGCGGTTAAATAAAATTGTT+TGG | - | chr4_1:80203101-80203120 | Msa0576130:intron | 30.0% | |
| TCAAATCAGATTATCCCATA+TGG | - | chr4_1:80203220-80203239 | Msa0576130:intron | 30.0% | |
| CAAATCAGATTATCCCATAT+GGG | - | chr4_1:80203221-80203240 | Msa0576130:intron | 30.0% | |
| TCTATCACCAATTCAATTCT+GGG | - | chr4_1:80203289-80203308 | Msa0576130:CDS | 30.0% | |
| TTTGCAAAGGAACTATTACA+AGG | - | chr4_1:80203499-80203518 | Msa0576130:CDS | 30.0% | |
| ! | ATTACAAGGAGCTATTGATT+TGG | - | chr4_1:80203513-80203532 | Msa0576130:CDS | 30.0% |
| ! | CTGAGAATCTTTTATCTTTC+TGG | + | chr4_1:80203766-80203785 | None:intergenic | 30.0% |
| GAAAGATAAAAGATTCTCAG+CGG | - | chr4_1:80203766-80203785 | Msa0576130:CDS | 30.0% | |
| ! | ATTAGTTTGGCTATTACGTT+TGG | + | chr4_1:80203861-80203880 | None:intergenic | 30.0% |
| AAACGTAATAGCCAAACTAA+TGG | - | chr4_1:80203860-80203879 | Msa0576130:CDS | 30.0% | |
| AACGTAATAGCCAAACTAAT+GGG | - | chr4_1:80203861-80203880 | Msa0576130:CDS | 30.0% | |
| !! | GTTGGAATAAAAGCATTGAA+GGG | - | chr4_1:80204113-80204132 | Msa0576130:CDS | 30.0% |
| AAATTATGTTGAGGTGATGA+TGG | - | chr4_1:80204175-80204194 | Msa0576130:CDS | 30.0% | |
| AATTATGTTGAGGTGATGAT+GGG | - | chr4_1:80204176-80204195 | Msa0576130:CDS | 30.0% | |
| ! | GTAAAGGACAGAAGTATAAA+TGG | - | chr4_1:80204233-80204252 | Msa0576130:CDS | 30.0% |
| ! | TCCTTCTTTTGCAATTTGAA+TGG | + | chr4_1:80204318-80204337 | None:intergenic | 30.0% |
| AAACAATGAAAAGAAGTCTC+GGG | - | chr4_1:80204367-80204386 | Msa0576130:CDS | 30.0% | |
| ! | TTGACTTTTGAACTACGATA+TGG | + | chr4_1:80204394-80204413 | None:intergenic | 30.0% |
| AAGTCAATTATCTCCAAAGA+CGG | - | chr4_1:80204407-80204426 | Msa0576130:CDS | 30.0% | |
| !!! | GATTGTTTTGATGAACTCTT+GGG | + | chr4_1:80204449-80204468 | None:intergenic | 30.0% |
| ! | CTTCTTCTTCTGAAGATTAT+TGG | + | chr4_1:80204474-80204493 | None:intergenic | 30.0% |
| CGTTCAAATTCTTGATATCT+TGG | + | chr4_1:80204608-80204627 | None:intergenic | 30.0% | |
| GGAAAATTGAATGTCTTGAA+TGG | - | chr4_1:80204749-80204768 | Msa0576130:five_prime_UTR | 30.0% | |
| GAATTGTATAACGTAGAAGT+AGG | + | chr4_1:80204821-80204840 | None:intergenic | 30.0% | |
| ACTTCTACGTTATACAATTC+TGG | - | chr4_1:80204821-80204840 | Msa0576130:five_prime_UTR | 30.0% | |
| GTTCATATGACATAAATTGG+CGG | + | chr4_1:80204912-80204931 | None:intergenic | 30.0% | |
| CCTGTGATATTAAACAAACT+AGG | + | chr4_1:80205201-80205220 | None:intergenic | 30.0% | |
| !! | CCTAGTTTGTTTAATATCAC+AGG | - | chr4_1:80205198-80205217 | Msa0576130:intron | 30.0% |
| CTATGAAGTGATGAAAAGAA+AGG | - | chr4_1:80205443-80205462 | Msa0576130:intron | 30.0% | |
| ATGAAGTGATGAAAAGAAAG+GGG | - | chr4_1:80205445-80205464 | Msa0576130:intron | 30.0% | |
| AGAAGATTAAATTCTACGGA+AGG | - | chr4_1:80205580-80205599 | Msa0576130:intron | 30.0% | |
| GCATATTCTTAGTATACTTC+TGG | - | chr4_1:80205764-80205783 | Msa0576130:intron | 30.0% | |
| CTTGAATGTGCAATATTCTT+TGG | + | chr4_1:80205799-80205818 | None:intergenic | 30.0% | |
| CAAAGAATATTGCACATTCA+AGG | - | chr4_1:80205797-80205816 | Msa0576130:intron | 30.0% | |
| TTCGTTGTAAAGTTTGTAAC+TGG | - | chr4_1:80205883-80205902 | Msa0576130:five_prime_UTR | 30.0% | |
| TTAGTTAGGACCCAAATTAT+AGG | + | chr4_1:80206026-80206045 | None:intergenic | 30.0% | |
| ! | TATGGAAATTATGAGGTGCT+GGG | + | chr4_1:80202118-80202137 | None:intergenic | 35.0% |
| TTATGGAAATTATGAGGTGC+TGG | + | chr4_1:80202119-80202138 | None:intergenic | 35.0% | |
| TCACAGTCACTGCTAAATTA+TGG | - | chr4_1:80202155-80202174 | Msa0576130:three_prime_UTR | 35.0% | |
| TGTTACTACCTATAGGCAAA+TGG | + | chr4_1:80202284-80202303 | None:intergenic | 35.0% | |
| TTAAGAGCTCATCGAATGAA+AGG | + | chr4_1:80202585-80202604 | None:intergenic | 35.0% | |
| ! | TTTGAGATTTCGATGGTGTA+AGG | - | chr4_1:80202820-80202839 | Msa0576130:CDS | 35.0% |
| ! | ATAATGGAGGGAAACTAAGA+AGG | - | chr4_1:80203257-80203276 | Msa0576130:CDS | 35.0% |
| TAATGGAGGGAAACTAAGAA+GGG | - | chr4_1:80203258-80203277 | Msa0576130:CDS | 35.0% | |
| ! | TGAATTGGTGATAGACAGAT+CGG | + | chr4_1:80203284-80203303 | None:intergenic | 35.0% |
| GTCTATCACCAATTCAATTC+TGG | - | chr4_1:80203288-80203307 | Msa0576130:CDS | 35.0% | |
| AAGGAAACCCAGAATTGAAT+TGG | + | chr4_1:80203299-80203318 | None:intergenic | 35.0% | |
| TTTCCTTCACCAGATTCAAA+GGG | - | chr4_1:80203312-80203331 | Msa0576130:CDS | 35.0% | |
| GTTTATCTGTTCAAGAGAGA+GGG | + | chr4_1:80203392-80203411 | None:intergenic | 35.0% | |
| CAGATAAACGAGATATCCAA+AGG | - | chr4_1:80203403-80203422 | Msa0576130:CDS | 35.0% | |
| TGTATCCATGTTAACACCAT+TGG | + | chr4_1:80203467-80203486 | None:intergenic | 35.0% | |
| TCGAATCACACTATTAGAAG+AGG | - | chr4_1:80203612-80203631 | Msa0576130:CDS | 35.0% | |
| AATCACACTATTAGAAGAGG+AGG | - | chr4_1:80203615-80203634 | Msa0576130:CDS | 35.0% | |
| AAAAACCAAAAAGTGGCTGT+TGG | - | chr4_1:80204002-80204021 | Msa0576130:CDS | 35.0% | |
| TCCTTCAAAACCATGATGTT+TGG | - | chr4_1:80204026-80204045 | Msa0576130:CDS | 35.0% | |
| !!! | ACCAAACATCATGGTTTTGA+AGG | + | chr4_1:80204030-80204049 | None:intergenic | 35.0% |
| TTCAAAACCATGATGTTTGG+TGG | - | chr4_1:80204029-80204048 | Msa0576130:CDS | 35.0% | |
| TGGTGGTCCAGATAAAAATT+TGG | - | chr4_1:80204046-80204065 | Msa0576130:CDS | 35.0% | |
| ! | TGGAGGACCAAATTTTTATC+TGG | + | chr4_1:80204056-80204075 | None:intergenic | 35.0% |
| !!! | AATAGGCAGACTTTTGGTTT+TGG | + | chr4_1:80204076-80204095 | None:intergenic | 35.0% |
| !! | GGTTGGAATAAAAGCATTGA+AGG | - | chr4_1:80204112-80204131 | Msa0576130:CDS | 35.0% |
| TGCTCGTCAAAATTATGTTG+AGG | - | chr4_1:80204166-80204185 | Msa0576130:CDS | 35.0% | |
| ! | TCTTTTGCAATTTGAATGGC+AGG | + | chr4_1:80204314-80204333 | None:intergenic | 35.0% |
| GCCATTCAAATTGCAAAAGA+AGG | - | chr4_1:80204314-80204333 | Msa0576130:CDS | 35.0% | |
| !!! | GGATTGTTTTGATGAACTCT+TGG | + | chr4_1:80204450-80204469 | None:intergenic | 35.0% |
| ! | CTTCTTCTGAAGATTATTGG+TGG | + | chr4_1:80204471-80204490 | None:intergenic | 35.0% |
| AAATTCTTGATATCTTGGGG+AGG | + | chr4_1:80204603-80204622 | None:intergenic | 35.0% | |
| CAAGAATTTGAACGAGCTAA+TGG | - | chr4_1:80204614-80204633 | Msa0576130:five_prime_UTR | 35.0% | |
| AGAAATGAACAAGAAGCTAG+TGG | - | chr4_1:80204716-80204735 | Msa0576130:five_prime_UTR | 35.0% | |
| TTATACAATTCTGGCAAGAG+TGG | - | chr4_1:80204830-80204849 | Msa0576130:five_prime_UTR | 35.0% | |
| GAGTGGAGATTTACAAGAAT+CGG | - | chr4_1:80204847-80204866 | Msa0576130:five_prime_UTR | 35.0% | |
| ! | TCTTGCAAATTGGTTCCTAT+CGG | + | chr4_1:80205048-80205067 | None:intergenic | 35.0% |
| AACAGCTTGATCTTGCAAAT+TGG | + | chr4_1:80205058-80205077 | None:intergenic | 35.0% | |
| TTTATGGTATGCAACTTCAC+TGG | + | chr4_1:80205109-80205128 | None:intergenic | 35.0% | |
| ACTAACTAAACACGGATGAA+TGG | - | chr4_1:80205151-80205170 | Msa0576130:intron | 35.0% | |
| GTTTAATATCACAGGAGTTC+AGG | - | chr4_1:80205206-80205225 | Msa0576130:intron | 35.0% | |
| ! | TGGTTTTCACTTTCTGTTAG+TGG | + | chr4_1:80205282-80205301 | None:intergenic | 35.0% |
| TTACCTTGAAGAATGCCAAA+CGG | + | chr4_1:80205375-80205394 | None:intergenic | 35.0% | |
| !! | CTAATATCAGCTTGCTACTT+TGG | + | chr4_1:80205416-80205435 | None:intergenic | 35.0% |
| AGCAAGCTGATATTAGATTG+CGG | - | chr4_1:80205420-80205439 | Msa0576130:intron | 35.0% | |
| TGATGAAAAGAAAGGGGATA+CGG | - | chr4_1:80205451-80205470 | Msa0576130:intron | 35.0% | |
| GATAAGATCTCTAGATGACT+TGG | - | chr4_1:80205533-80205552 | Msa0576130:intron | 35.0% | |
| ATATCATGCTCAAGCATCTT+AGG | + | chr4_1:80205642-80205661 | None:intergenic | 35.0% | |
| ATAGATTGCATGTGGGATTT+AGG | - | chr4_1:80205681-80205700 | Msa0576130:intron | 35.0% | |
| TGTAAAGTTTGTAACTGGTG+AGG | - | chr4_1:80205888-80205907 | Msa0576130:five_prime_UTR | 35.0% | |
| CTAGTGCGAACCTATAATTT+GGG | - | chr4_1:80206013-80206032 | Msa0576130:five_prime_UTR | 35.0% | |
| TAGCAGTGACTGTGACAAAA+TGG | + | chr4_1:80202150-80202169 | None:intergenic | 40.0% | |
| TTCTCAATGATCTGCGTGTA+AGG | - | chr4_1:80202205-80202224 | Msa0576130:three_prime_UTR | 40.0% | |
| CTATAGGCAAATGGTAGGAT+TGG | + | chr4_1:80202275-80202294 | None:intergenic | 40.0% | |
| CAATCCTACCATTTGCCTAT+AGG | - | chr4_1:80202273-80202292 | Msa0576130:three_prime_UTR | 40.0% | |
| ACTACCTATAGGCAAATGGT+AGG | + | chr4_1:80202280-80202299 | None:intergenic | 40.0% | |
| ! | TCTACATTAATTGAGGGTGC+TGG | - | chr4_1:80202500-80202519 | Msa0576130:CDS | 40.0% |
| ! | TGTATTTGTTGACCCTCTGT+AGG | + | chr4_1:80203017-80203036 | None:intergenic | 40.0% |
| AAATAGCAGAGTTGTGTTGG+CGG | - | chr4_1:80203083-80203102 | Msa0576130:intron | 40.0% | |
| !! | ATTTCTGGAACTAACCTGCA+GGG | + | chr4_1:80203140-80203159 | None:intergenic | 40.0% |
| ! | TGCAGGTTAGTTCCAGAAAT+GGG | - | chr4_1:80203140-80203159 | Msa0576130:intron | 40.0% |
| AAAGCCTTCGACAATAATGG+AGG | - | chr4_1:80203244-80203263 | Msa0576130:CDS | 40.0% | |
| ! | AAGCCTTCGACAATAATGGA+GGG | - | chr4_1:80203245-80203264 | Msa0576130:CDS | 40.0% |
| TTTCCCTCCATTATTGTCGA+AGG | + | chr4_1:80203251-80203270 | None:intergenic | 40.0% | |
| GTTTCCTTCACCAGATTCAA+AGG | - | chr4_1:80203311-80203330 | Msa0576130:CDS | 40.0% | |
| TTCCTTCACCAGATTCAAAG+GGG | - | chr4_1:80203313-80203332 | Msa0576130:CDS | 40.0% | |
| AATGGATAGAGGAAGCAACT+TGG | - | chr4_1:80203339-80203358 | Msa0576130:CDS | 40.0% | |
| CGTTTATCTGTTCAAGAGAG+AGG | + | chr4_1:80203393-80203412 | None:intergenic | 40.0% | |
| ! | GTTTAGTTTCTGTGCACCTT+TGG | + | chr4_1:80203422-80203441 | None:intergenic | 40.0% |
| !! | ATTGATTTGGAAGAGTCGCT+TGG | - | chr4_1:80203526-80203545 | Msa0576130:CDS | 40.0% |
| ! | ATTTTTGTTCTGTGCTTGCG+AGG | + | chr4_1:80203593-80203612 | None:intergenic | 40.0% |
| TTGTTGTCAACCGAGAAAGT+TGG | + | chr4_1:80203705-80203724 | None:intergenic | 40.0% | |
| AAGCGAACATCAACTAACAC+TGG | - | chr4_1:80203789-80203808 | Msa0576130:CDS | 40.0% | |
| AATAGCCAAACTAATGGGAC+TGG | - | chr4_1:80203866-80203885 | Msa0576130:CDS | 40.0% | |
| TGTTTGTTTGCTCTTCAGTG+TGG | + | chr4_1:80203970-80203989 | None:intergenic | 40.0% | |
| ! | CAGAGTAATAGGCAGACTTT+TGG | + | chr4_1:80204082-80204101 | None:intergenic | 40.0% |
| ! | TTACAGTGCCACTGTTATGT+GGG | + | chr4_1:80204217-80204236 | None:intergenic | 40.0% |
| ! | TTTACAGTGCCACTGTTATG+TGG | + | chr4_1:80204218-80204237 | None:intergenic | 40.0% |
| ACATAACAGTGGCACTGTAA+AGG | - | chr4_1:80204217-80204236 | Msa0576130:CDS | 40.0% | |
| TCAATTATCTCCAAAGACGG+AGG | - | chr4_1:80204410-80204429 | Msa0576130:CDS | 40.0% | |
| CAATTATCTCCAAAGACGGA+GGG | - | chr4_1:80204411-80204430 | Msa0576130:CDS | 40.0% | |
| TCACCACGTGATATCTTGAA+CGG | + | chr4_1:80204524-80204543 | None:intergenic | 40.0% | |
| TGAATGGAGCAGACCAAAAA+AGG | - | chr4_1:80204765-80204784 | Msa0576130:five_prime_UTR | 40.0% | |
| ACAAGAATCGGCCAATGATT+TGG | - | chr4_1:80204859-80204878 | Msa0576130:five_prime_UTR | 40.0% | |
| GTCAGTGCTTACCAAATCAT+TGG | + | chr4_1:80204873-80204892 | None:intergenic | 40.0% | |
| CACTTTCTGTTAGTGGTTGT+TGG | + | chr4_1:80205275-80205294 | None:intergenic | 40.0% | |
| AAAGTGAAAACCACCTCAAG+TGG | - | chr4_1:80205289-80205308 | Msa0576130:intron | 40.0% | |
| !! | AAACCACCTCAAGTGGATTT+TGG | - | chr4_1:80205296-80205315 | Msa0576130:intron | 40.0% |
| TTCAGACTAAACATCCCGTT+TGG | - | chr4_1:80205357-80205376 | Msa0576130:intron | 40.0% | |
| TACCTTGAAGAATGCCAAAC+GGG | + | chr4_1:80205374-80205393 | None:intergenic | 40.0% | |
| !! | GAGTAGCAAAGTTGATGTTG+AGG | - | chr4_1:80205608-80205627 | Msa0576130:intron | 40.0% |
| ATTGCATGTGGGATTTAGGT+TGG | - | chr4_1:80205685-80205704 | Msa0576130:intron | 40.0% | |
| CCAAATTATAGGTTCGCACT+AGG | + | chr4_1:80206015-80206034 | None:intergenic | 40.0% | |
| CCTAGTGCGAACCTATAATT+TGG | - | chr4_1:80206012-80206031 | Msa0576130:five_prime_UTR | 40.0% | |
| TACTATCAGAGTTGGGTGAG+GGG | + | chr4_1:80202058-80202077 | None:intergenic | 45.0% | |
| GTACTATCAGAGTTGGGTGA+GGG | + | chr4_1:80202059-80202078 | None:intergenic | 45.0% | |
| !! | GAGAGGGTACTATCAGAGTT+GGG | + | chr4_1:80202065-80202084 | None:intergenic | 45.0% |
| !! | TGAGAGGGTACTATCAGAGT+TGG | + | chr4_1:80202066-80202085 | None:intergenic | 45.0% |
| GCGTGTAAGGAAAGAACGAA+TGG | - | chr4_1:80202218-80202237 | Msa0576130:three_prime_UTR | 45.0% | |
| TGAAGACTGGCAGTAAGGTA+GGG | + | chr4_1:80202706-80202725 | None:intergenic | 45.0% | |
| TACACCAAGCAAACCTACAG+AGG | - | chr4_1:80203001-80203020 | Msa0576130:CDS | 45.0% | |
| ACACCAAGCAAACCTACAGA+GGG | - | chr4_1:80203002-80203021 | Msa0576130:CDS | 45.0% | |
| !! | CATTTCTGGAACTAACCTGC+AGG | + | chr4_1:80203141-80203160 | None:intergenic | 45.0% |
| ! | CTGCAGGTTAGTTCCAGAAA+TGG | - | chr4_1:80203139-80203158 | Msa0576130:intron | 45.0% |
| ! | GCAGGTTAGTTCCAGAAATG+GGG | - | chr4_1:80203141-80203160 | Msa0576130:intron | 45.0% |
| TAGTTCCAGAAATGGGGAGA+CGG | - | chr4_1:80203147-80203166 | Msa0576130:intron | 45.0% | |
| ! | CAGAGATCAGTAAAGAGTGC+AGG | - | chr4_1:80203190-80203209 | Msa0576130:intron | 45.0% |
| TGTCGAAGGCTTTCCCATAT+GGG | + | chr4_1:80203237-80203256 | None:intergenic | 45.0% | |
| TTGTCGAAGGCTTTCCCATA+TGG | + | chr4_1:80203238-80203257 | None:intergenic | 45.0% | |
| GGGAAAGCCTTCGACAATAA+TGG | - | chr4_1:80203241-80203260 | Msa0576130:intron | 45.0% | |
| TTCCCCTTTGAATCTGGTGA+AGG | + | chr4_1:80203318-80203337 | None:intergenic | 45.0% | |
| CCATTCTTCCCCTTTGAATC+TGG | + | chr4_1:80203324-80203343 | None:intergenic | 45.0% | |
| CCAGATTCAAAGGGGAAGAA+TGG | - | chr4_1:80203321-80203340 | Msa0576130:CDS | 45.0% | |
| CAAAGGGGAAGAATGGATAG+AGG | - | chr4_1:80203328-80203347 | Msa0576130:CDS | 45.0% | |
| ATAGAGGAAGCAACTTGGAC+AGG | - | chr4_1:80203344-80203363 | Msa0576130:CDS | 45.0% | |
| TCTGTTCAAGAGAGAGGGTA+TGG | + | chr4_1:80203387-80203406 | None:intergenic | 45.0% | |
| AGCAGCAAGCTCTCAATATG+TGG | + | chr4_1:80203444-80203463 | None:intergenic | 45.0% | |
| ! | CTGCTCCAATGGTGTTAACA+TGG | - | chr4_1:80203459-80203478 | Msa0576130:CDS | 45.0% |
| CACACTATTAGAAGAGGAGG+AGG | - | chr4_1:80203618-80203637 | Msa0576130:CDS | 45.0% | |
| ACTATTAGAAGAGGAGGAGG+AGG | - | chr4_1:80203621-80203640 | Msa0576130:CDS | 45.0% | |
| GAGGATGGAGAAAATGCAAC+TGG | - | chr4_1:80203674-80203693 | Msa0576130:CDS | 45.0% | |
| TGCCGACATTTCAAACCAGA+TGG | - | chr4_1:80203818-80203837 | Msa0576130:CDS | 45.0% | |
| ! | GGCCATCTGGTTTGAAATGT+CGG | + | chr4_1:80203823-80203842 | None:intergenic | 45.0% |
| ! | GTTTGGAATCCTTCCCTTGT+CGG | + | chr4_1:80203844-80203863 | None:intergenic | 45.0% |
| GTTGTCCAGTCCCATTAGTT+TGG | + | chr4_1:80203874-80203893 | None:intergenic | 45.0% | |
| GACAACCTTCCTGAGAAGAA+GGG | - | chr4_1:80203888-80203907 | Msa0576130:CDS | 45.0% | |
| TCATCCAAACACTCTGCCAA+AGG | - | chr4_1:80203933-80203952 | Msa0576130:CDS | 45.0% | |
| ! | GTTTCCTTTGGCAGAGTGTT+TGG | + | chr4_1:80203940-80203959 | None:intergenic | 45.0% |
| !!! | AGGATCCAACAGCCACTTTT+TGG | + | chr4_1:80204010-80204029 | None:intergenic | 45.0% |
| ATCTGGACCACCAAACATCA+TGG | + | chr4_1:80204039-80204058 | None:intergenic | 45.0% | |
| !!! | AGGCAGACTTTTGGTTTTGG+AGG | + | chr4_1:80204073-80204092 | None:intergenic | 45.0% |
| TGCCTATTACTCTGAGTCTG+AGG | - | chr4_1:80204088-80204107 | Msa0576130:CDS | 45.0% | |
| CACCTCAGACTCAGAGTAAT+AGG | + | chr4_1:80204093-80204112 | None:intergenic | 45.0% | |
| CTATTACTCTGAGTCTGAGG+TGG | - | chr4_1:80204091-80204110 | Msa0576130:CDS | 45.0% | |
| ! | AGCATTGAAGGGCTTTGACA+AGG | - | chr4_1:80204124-80204143 | Msa0576130:CDS | 45.0% |
| !! | AGCAGAATCGTTGATGATGC+TGG | + | chr4_1:80204150-80204169 | None:intergenic | 45.0% |
| !! | ATGTTGAGGTGATGATGGGA+AGG | - | chr4_1:80204180-80204199 | Msa0576130:CDS | 45.0% |
| !! | TTGGTAAGCACTGACTGAGT+AGG | - | chr4_1:80204878-80204897 | Msa0576130:five_prime_UTR | 45.0% |
| AGGAGTTCAGGAAGACAGAA+TGG | - | chr4_1:80205218-80205237 | Msa0576130:intron | 45.0% | |
| GGAGTTCAGGAAGACAGAAT+GGG | - | chr4_1:80205219-80205238 | Msa0576130:intron | 45.0% | |
| TGACCAAAATCCACTTGAGG+TGG | + | chr4_1:80205302-80205321 | None:intergenic | 45.0% | |
| TCGTGACCAAAATCCACTTG+AGG | + | chr4_1:80205305-80205324 | None:intergenic | 45.0% | |
| ATCCCGTTTGGCATTCTTCA+AGG | - | chr4_1:80205369-80205388 | Msa0576130:intron | 45.0% | |
| CTTGGTTAAGAAGCTGAACG+AGG | - | chr4_1:80205551-80205570 | Msa0576130:intron | 45.0% | |
| TAAGAAGCTGAACGAGGACA+TGG | - | chr4_1:80205557-80205576 | Msa0576130:intron | 45.0% | |
| GCCTGACATAGATTGCATGT+GGG | - | chr4_1:80205674-80205693 | Msa0576130:intron | 45.0% | |
| TCCCACATGCAATCTATGTC+AGG | + | chr4_1:80205678-80205697 | None:intergenic | 45.0% | |
| !!! | CATGGCCGATTCTGAGATTT+TGG | - | chr4_1:80205986-80206005 | Msa0576130:five_prime_UTR | 45.0% |
| GGCCTCCAAAATCTCAGAAT+CGG | + | chr4_1:80205994-80206013 | None:intergenic | 45.0% | |
| GGTACTATCAGAGTTGGGTG+AGG | + | chr4_1:80202060-80202079 | None:intergenic | 50.0% | |
| TGGGACGTAGAAGAGGAGAA+GGG | + | chr4_1:80202099-80202118 | None:intergenic | 50.0% | |
| GAAGACTGGCAGTAAGGTAG+GGG | + | chr4_1:80202705-80202724 | None:intergenic | 50.0% | |
| GTGAAGACTGGCAGTAAGGT+AGG | + | chr4_1:80202707-80202726 | None:intergenic | 50.0% | |
| GAGAGTGAAGACTGGCAGTA+AGG | + | chr4_1:80202711-80202730 | None:intergenic | 50.0% | |
| GCCAGTCTTCACTCTCATCA+CGG | - | chr4_1:80202715-80202734 | Msa0576130:CDS | 50.0% | |
| TCCGTGATGAGAGTGAAGAC+TGG | + | chr4_1:80202719-80202738 | None:intergenic | 50.0% | |
| ! | TGACCCTCTGTAGGTTTGCT+TGG | + | chr4_1:80203008-80203027 | None:intergenic | 50.0% |
| ATTCACCGTCTCCCCATTTC+TGG | + | chr4_1:80203155-80203174 | None:intergenic | 50.0% | |
| GAAATGGGGAGACGGTGAAT+TGG | - | chr4_1:80203155-80203174 | Msa0576130:intron | 50.0% | |
| ! | CGGTGAATTGGTCTAGCAGA+AGG | - | chr4_1:80203167-80203186 | Msa0576130:intron | 50.0% |
| !! | TTGAGAGCTTGCTGCTCCAA+TGG | - | chr4_1:80203448-80203467 | Msa0576130:CDS | 50.0% |
| AGAGTCGCTTGGAATGCTAG+TGG | - | chr4_1:80203537-80203556 | Msa0576130:CDS | 50.0% | |
| AGGAGGAGGTAGAAGATGAG+AGG | - | chr4_1:80203649-80203668 | Msa0576130:CDS | 50.0% | |
| AGGAGGTAGAAGATGAGAGG+AGG | - | chr4_1:80203652-80203671 | Msa0576130:CDS | 50.0% | |
| AGGTAGAAGATGAGAGGAGG+AGG | - | chr4_1:80203655-80203674 | Msa0576130:CDS | 50.0% | |
| AGAAGATGAGAGGAGGAGGA+TGG | - | chr4_1:80203659-80203678 | Msa0576130:CDS | 50.0% | |
| ACTGGCACGTCCAACTTTCT+CGG | - | chr4_1:80203692-80203711 | Msa0576130:CDS | 50.0% | |
| TTCAAACCAGATGGCCGACA+AGG | - | chr4_1:80203827-80203846 | Msa0576130:CDS | 50.0% | |
| TCAAACCAGATGGCCGACAA+GGG | - | chr4_1:80203828-80203847 | Msa0576130:CDS | 50.0% | |
| GGACAACCTTCCTGAGAAGA+AGG | - | chr4_1:80203887-80203906 | Msa0576130:CDS | 50.0% | |
| CCTTCCTGAGAAGAAGGGTT+CGG | - | chr4_1:80203893-80203912 | Msa0576130:CDS | 50.0% | |
| CTTCCTGAGAAGAAGGGTTC+GGG | - | chr4_1:80203894-80203913 | Msa0576130:CDS | 50.0% | |
| TTACCCGAACCCTTCTTCTC+AGG | + | chr4_1:80203900-80203919 | None:intergenic | 50.0% | |
| !! | TGTGGTGCTGCTGTTTCCTT+TGG | + | chr4_1:80203952-80203971 | None:intergenic | 50.0% |
| ! | TACTCTGAGTCTGAGGTGGT+TGG | - | chr4_1:80204095-80204114 | Msa0576130:CDS | 50.0% |
| !! | GGTGATGATGGGAAGGAAAC+AGG | - | chr4_1:80204187-80204206 | Msa0576130:CDS | 50.0% |
| CAGGATCACCCACATAACAG+TGG | - | chr4_1:80204206-80204225 | Msa0576130:CDS | 50.0% | |
| CATTTCTCTCCCTCCGTCTT+TGG | + | chr4_1:80204423-80204442 | None:intergenic | 50.0% | |
| ATATCTTGAACGGCGTGGGT+TGG | + | chr4_1:80204514-80204533 | None:intergenic | 50.0% | |
| CGTGATATCTTGAACGGCGT+GGG | + | chr4_1:80204518-80204537 | None:intergenic | 50.0% | |
| ACGTGATATCTTGAACGGCG+TGG | + | chr4_1:80204519-80204538 | None:intergenic | 50.0% | |
| ACGCCGTTCAAGATATCACG+TGG | - | chr4_1:80204518-80204537 | Msa0576130:five_prime_UTR | 50.0% | |
| ! | GAAGCTAGTGGTAGAGCATC+TGG | - | chr4_1:80204728-80204747 | Msa0576130:five_prime_UTR | 50.0% |
| TACCAAGCTGTGCAACCGAT+AGG | - | chr4_1:80205030-80205049 | Msa0576130:intron | 50.0% | |
| ! | TTCCTATCGGTTGCACAGCT+TGG | + | chr4_1:80205035-80205054 | None:intergenic | 50.0% |
| GCAAGATCAAGCTGTTCCTG+AGG | - | chr4_1:80205062-80205081 | Msa0576130:intron | 50.0% | |
| GAAAAGAAAGGGGATACGGC+AGG | - | chr4_1:80205455-80205474 | Msa0576130:intron | 50.0% | |
| CATGCTCAAGCATCTTAGGC+AGG | + | chr4_1:80205638-80205657 | None:intergenic | 50.0% | |
| GGCCTGACATAGATTGCATG+TGG | - | chr4_1:80205673-80205692 | Msa0576130:intron | 50.0% | |
| !!! | GGCCGATTCTGAGATTTTGG+AGG | - | chr4_1:80205989-80206008 | Msa0576130:five_prime_UTR | 50.0% |
| AAGGGGGGAGATGGTTGAGA+GGG | + | chr4_1:80202081-80202100 | None:intergenic | 55.0% | |
| GACGTAGAAGAGGAGAAGGG+GGG | + | chr4_1:80202096-80202115 | None:intergenic | 55.0% | |
| GGACGTAGAAGAGGAGAAGG+GGG | + | chr4_1:80202097-80202116 | None:intergenic | 55.0% | |
| GGGACGTAGAAGAGGAGAAG+GGG | + | chr4_1:80202098-80202117 | None:intergenic | 55.0% | |
| CTGGGACGTAGAAGAGGAGA+AGG | + | chr4_1:80202100-80202119 | None:intergenic | 55.0% | |
| ! | CTAACCTGCAGGGCATCACA+TGG | + | chr4_1:80203130-80203149 | None:intergenic | 55.0% |
| AAGAGGAGGAGGAGGAGAAG+AGG | - | chr4_1:80203629-80203648 | Msa0576130:CDS | 55.0% | |
| CCGAACCCTTCTTCTCAGGA+AGG | + | chr4_1:80203896-80203915 | None:intergenic | 55.0% | |
| TGTTCCTGAGGCAGCACATG+AGG | - | chr4_1:80205074-80205093 | Msa0576130:five_prime_UTR | 55.0% | |
| GTTCCTGAGGCAGCACATGA+GGG | - | chr4_1:80205075-80205094 | Msa0576130:five_prime_UTR | 55.0% | |
| AATCCCTCATGTGCTGCCTC+AGG | + | chr4_1:80205081-80205100 | None:intergenic | 55.0% | |
| TCAGAGTTGGGTGAGGGGTG+AGG | + | chr4_1:80202053-80202072 | None:intergenic | 60.0% | |
| GAAGGGGGGAGATGGTTGAG+AGG | + | chr4_1:80202082-80202101 | None:intergenic | 60.0% | |
| GAAGAGGAGAAGGGGGGAGA+TGG | + | chr4_1:80202090-80202109 | None:intergenic | 60.0% | |
| !! | GAGGTGCTGGGACGTAGAAG+AGG | + | chr4_1:80202106-80202125 | None:intergenic | 60.0% |
| GTGTCCATGTGATGCCCTGC+AGG | - | chr4_1:80203123-80203142 | Msa0576130:intron | 60.0% | |
| AGGAGGAGGAGGAGAAGAGG+AGG | - | chr4_1:80203632-80203651 | Msa0576130:CDS | 60.0% | |
| AGGAGGAGGAGAAGAGGAGG+AGG | - | chr4_1:80203635-80203654 | Msa0576130:CDS | 60.0% | |
| ACCAGATGGCCGACAAGGGA+AGG | - | chr4_1:80203832-80203851 | Msa0576130:CDS | 60.0% | |
| TCCTTCCCTTGTCGGCCATC+TGG | + | chr4_1:80203836-80203855 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 80202050 | 80206073 | 80202050 | ID=Msa0576130;Name=Msa0576130 |
| chr4_1 | mRNA | 80202050 | 80206073 | 80202050 | ID=Msa0576130-mRNA-1;Parent=Msa0576130;Name=Msa0576130-mRNA-1;_AED=0.05;_eAED=0.05;_QI=840|1|1|1|1|0.8|5|246|641 |
| chr4_1 | exon | 80202050 | 80202903 | 80202050 | ID=Msa0576130-mRNA-1:exon:28668;Parent=Msa0576130-mRNA-1 |
| chr4_1 | exon | 80202982 | 80203096 | 80202982 | ID=Msa0576130-mRNA-1:exon:28667;Parent=Msa0576130-mRNA-1 |
| chr4_1 | exon | 80203243 | 80204978 | 80203243 | ID=Msa0576130-mRNA-1:exon:28666;Parent=Msa0576130-mRNA-1 |
| chr4_1 | exon | 80205072 | 80205133 | 80205072 | ID=Msa0576130-mRNA-1:exon:28665;Parent=Msa0576130-mRNA-1 |
| chr4_1 | exon | 80205829 | 80206073 | 80205829 | ID=Msa0576130-mRNA-1:exon:28664;Parent=Msa0576130-mRNA-1 |
| chr4_1 | five_prime_UTR | 80205829 | 80206073 | 80205829 | ID=Msa0576130-mRNA-1:five_prime_utr;Parent=Msa0576130-mRNA-1 |
| chr4_1 | five_prime_UTR | 80205072 | 80205133 | 80205072 | ID=Msa0576130-mRNA-1:five_prime_utr;Parent=Msa0576130-mRNA-1 |
| chr4_1 | five_prime_UTR | 80204446 | 80204978 | 80204446 | ID=Msa0576130-mRNA-1:five_prime_utr;Parent=Msa0576130-mRNA-1 |
| chr4_1 | CDS | 80203243 | 80204445 | 80203243 | ID=Msa0576130-mRNA-1:cds;Parent=Msa0576130-mRNA-1 |
| chr4_1 | CDS | 80202982 | 80203096 | 80202982 | ID=Msa0576130-mRNA-1:cds;Parent=Msa0576130-mRNA-1 |
| chr4_1 | CDS | 80202296 | 80202903 | 80202296 | ID=Msa0576130-mRNA-1:cds;Parent=Msa0576130-mRNA-1 |
| chr4_1 | three_prime_UTR | 80202050 | 80202295 | 80202050 | ID=Msa0576130-mRNA-1:three_prime_utr;Parent=Msa0576130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
