Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0599520 | XP_013455612.2 | 90.372 | 457 | 16 | 4 | 28 | 458 | 42 | 496 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0599520 | sp|Q6H7U2|C3H13_ORYSJ | 32.135 | 445 | 221 | 16 | 51 | 443 | 11 | 426 | 1.10e-45 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0599520 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001240 | Msa0599520 | 0.805620 | 1.222403e-49 | -8.615850e-47 |
| Msa0017510 | Msa0599520 | 0.803607 | 3.216085e-49 | -8.615850e-47 |
| Msa0054730 | Msa0599520 | -0.810600 | 1.063365e-50 | -8.615850e-47 |
| Msa0074700 | Msa0599520 | 0.801822 | 7.511726e-49 | -8.615850e-47 |
| Msa0106370 | Msa0599520 | -0.802625 | 5.133021e-49 | -8.615850e-47 |
| Msa0114060 | Msa0599520 | 0.827352 | 1.640362e-54 | -8.615850e-47 |
| Msa0157290 | Msa0599520 | 0.802820 | 4.679204e-49 | -8.615850e-47 |
| Msa0159930 | Msa0599520 | 0.808715 | 2.702787e-50 | -8.615850e-47 |
| Msa0200260 | Msa0599520 | 0.813148 | 2.964215e-51 | -8.615850e-47 |
| Msa0220580 | Msa0599520 | 0.800228 | 1.589957e-48 | -8.615850e-47 |
| Msa0260680 | Msa0599520 | 0.816788 | 4.616477e-52 | -8.615850e-47 |
| Msa0280090 | Msa0599520 | 0.811440 | 6.995301e-51 | -8.615850e-47 |
| Msa0345970 | Msa0599520 | 0.802460 | 5.551237e-49 | -8.615850e-47 |
| Msa0597330 | Msa0599520 | 0.822239 | 2.635104e-53 | -8.615850e-47 |
| Msa0599520 | Msa0607050 | 0.812884 | 3.386160e-51 | -8.615850e-47 |
| Msa0599520 | Msa0661190 | -0.823125 | 1.638642e-53 | -8.615850e-47 |
| Msa0599520 | Msa0678600 | 0.909418 | 5.821488e-82 | -8.615850e-47 |
| Msa0599520 | Msa0690750 | 0.804375 | 2.226888e-49 | -8.615850e-47 |
| Msa0599520 | Msa0709400 | 0.809780 | 1.597499e-50 | -8.615850e-47 |
| Msa0599520 | Msa0796700 | 0.805864 | 1.086259e-49 | -8.615850e-47 |
| Msa0599520 | Msa0880140 | 0.801844 | 7.432405e-49 | -8.615850e-47 |
| Msa0599520 | Msa0993290 | 0.809077 | 2.261696e-50 | -8.615850e-47 |
| Msa0599520 | Msa0993600 | 0.807007 | 6.236515e-50 | -8.615850e-47 |
| Msa0599520 | Msa1006120 | -0.803271 | 3.774432e-49 | -8.615850e-47 |
| Msa0599520 | Msa1014540 | 0.807140 | 5.846962e-50 | -8.615850e-47 |
| Msa0599520 | Msa1041730 | 0.806632 | 7.487574e-50 | -8.615850e-47 |
| Msa0599520 | Msa1124050 | 0.824702 | 6.996646e-54 | -8.615850e-47 |
| Msa0599520 | Msa1124960 | 0.807720 | 4.404334e-50 | -8.615850e-47 |
| Msa0599520 | Msa1125080 | 0.809972 | 1.452937e-50 | -8.615850e-47 |
| Msa0599520 | Msa1170410 | 0.808138 | 3.588656e-50 | -8.615850e-47 |
| Msa0599520 | Msa1209010 | 0.814816 | 1.270583e-51 | -8.615850e-47 |
| Msa0599520 | Msa1244250 | 0.803550 | 3.304736e-49 | -8.615850e-47 |
| Msa0599520 | Msa1246510 | 0.807181 | 5.728802e-50 | -8.615850e-47 |
| Msa0599520 | Msa1296880 | 0.801034 | 1.089128e-48 | -8.615850e-47 |
| Msa0599520 | Msa1411020 | 0.801740 | 7.808089e-49 | -8.615850e-47 |
| Msa0599520 | Msa1434350 | 0.802575 | 5.257306e-49 | -8.615850e-47 |
| Msa0599520 | Msa1439320 | 0.800474 | 1.417032e-48 | -8.615850e-47 |
| Msa0599520 | Msa1452240 | 0.810182 | 1.308817e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0599520 | MtrunA17_Chr4g0024081 | 90.372 | 457 | 16 | 4 | 28 | 458 | 42 | 496 | 0.0 | 823 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0599520 | AT3G21810.1 | 33.333 | 303 | 139 | 8 | 51 | 301 | 7 | 298 | 9.06e-31 | 124 |
| Msa0599520 | AT3G21810.2 | 32.218 | 239 | 129 | 6 | 94 | 301 | 38 | 274 | 2.75e-18 | 87.0 |
Find 107 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATACTTCAATTCCATTATC+AGG | 0.154544 | 4_2:-39301634 | None:intergenic |
| TCCAATCACCAAACATAATT+TGG | 0.183533 | 4_2:+39300748 | Msa0599520:CDS |
| GTTCCTGAATTCTAGAATTA+AGG | 0.245226 | 4_2:-39300237 | None:intergenic |
| TAGCCTTAATTCTAGAATTC+AGG | 0.264978 | 4_2:+39300234 | Msa0599520:CDS |
| TTCTCAGACATTTCTAGAAT+TGG | 0.297684 | 4_2:+39300665 | Msa0599520:CDS |
| GCGGATCTCCTTGCAGAAAA+AGG | 0.300826 | 4_2:+39300780 | Msa0599520:CDS |
| TGATAATGGAATGGCATTAC+AGG | 0.320982 | 4_2:+39302067 | Msa0599520:CDS |
| AAGAGGATGGGGAGTATAAA+AGG | 0.327357 | 4_2:+39300278 | Msa0599520:CDS |
| TTGCTGCGGGGAATCAAATC+TGG | 0.330633 | 4_2:-39302116 | None:intergenic |
| TGTGAGGAGGCCCCTGATAA+TGG | 0.359411 | 4_2:+39301622 | Msa0599520:CDS |
| GCAGGAAAGAGAGACTATTT+AGG | 0.365279 | 4_2:+39298089 | Msa0599520:intron |
| TTCTGTCCTTGAAGTTTCAT+TGG | 0.368375 | 4_2:-39302042 | None:intergenic |
| TAGAAATACTCTTGAGGATC+AGG | 0.371223 | 4_2:+39299687 | Msa0599520:CDS |
| TGAAAATTCACCATTATAGT+TGG | 0.375369 | 4_2:-39295614 | None:intergenic |
| GAAAACACAAGAAAGGAATA+TGG | 0.376155 | 4_2:+39301677 | Msa0599520:CDS |
| AGTGGCCAAAGTGATATTTC+TGG | 0.381454 | 4_2:+39299598 | Msa0599520:CDS |
| GGTTGACGGCACTTCAATCC+TGG | 0.385159 | 4_2:-39301958 | None:intergenic |
| TCAAGGACAGAAAATGATAA+TGG | 0.388686 | 4_2:+39302053 | Msa0599520:CDS |
| AGTATCTAGGCACCAAGATC+TGG | 0.407157 | 4_2:+39301651 | Msa0599520:CDS |
| TCCAAATTATGTTTGGTGAT+TGG | 0.408302 | 4_2:-39300749 | None:intergenic |
| TTAAAGCATTATGTTGAAGA+AGG | 0.425995 | 4_2:+39302375 | Msa0599520:three_prime_UTR |
| CTTGTCTAGTTGTCTTTGCA+TGG | 0.441905 | 4_2:+39302454 | Msa0599520:three_prime_UTR |
| CAGAAGACATAGGAGAAAAC+AGG | 0.454359 | 4_2:+39299570 | Msa0599520:intron |
| CATGTGCAAAAGAACAGTTC+TGG | 0.459711 | 4_2:-39295564 | None:intergenic |
| TCTCGAGCCGGTGAATATCT+TGG | 0.463968 | 4_2:-39298158 | None:intergenic |
| GTTGTGTTCCAAATTATGTT+TGG | 0.469670 | 4_2:-39300756 | None:intergenic |
| TTTAGGTAATAATGACTTGA+GGG | 0.469756 | 4_2:+39298106 | Msa0599520:CDS |
| CATGGTTTAACTAGTATTTG+TGG | 0.472021 | 4_2:+39302313 | Msa0599520:exon |
| TAACAACATTCATTCAGAAA+AGG | 0.473891 | 4_2:+39301708 | Msa0599520:CDS |
| GTAAGCAATGGTGAGAATAC+TGG | 0.475904 | 4_2:+39300719 | Msa0599520:CDS |
| ATTCTGTACTTGTCTTTGCA+TGG | 0.479241 | 4_2:+39302489 | Msa0599520:three_prime_UTR |
| ATAATGGAATTGAAGTATCT+AGG | 0.479355 | 4_2:+39301638 | Msa0599520:CDS |
| TTGAAGAAGAAAAGAAAGAG+TGG | 0.480913 | 4_2:-39295321 | None:intergenic |
| CTGATACCAATGAAACTTCA+AGG | 0.492224 | 4_2:+39302036 | Msa0599520:CDS |
| CGACCTCTTGCCTCTCGAGC+CGG | 0.496526 | 4_2:-39298170 | None:intergenic |
| ATACTTCAATTCCATTATCA+GGG | 0.497610 | 4_2:-39301633 | None:intergenic |
| ACAACACGCTCGTCGCAACT+TGG | 0.497641 | 4_2:+39295441 | Msa0599520:CDS |
| TGCTGCGGGGAATCAAATCT+GGG | 0.499304 | 4_2:-39302115 | None:intergenic |
| TTCTAGAATTCAGGAACTTG+AGG | 0.500849 | 4_2:+39300243 | Msa0599520:CDS |
| CAGGTCCGACTTCAAAGGTT+CGG | 0.509285 | 4_2:+39300632 | Msa0599520:CDS |
| GGCAGCAGCAGCAGCCCATG+TGG | 0.509296 | 4_2:+39302289 | Msa0599520:CDS |
| ACTTCAATCCTGGATTCCTT+CGG | 0.509539 | 4_2:-39301948 | None:intergenic |
| AATTATGTTTGGTGATTGGA+GGG | 0.510840 | 4_2:-39300745 | None:intergenic |
| AGCGTTGATATTGTAAGCAA+TGG | 0.513750 | 4_2:+39300707 | Msa0599520:CDS |
| AAATTATGTTTGGTGATTGG+AGG | 0.515054 | 4_2:-39300746 | None:intergenic |
| AACTTCCAGAAATATCACTT+TGG | 0.517782 | 4_2:-39299603 | None:intergenic |
| ATATAGTCCACTGAGGTCTC+CGG | 0.522959 | 4_2:+39298623 | Msa0599520:CDS |
| AACCTGCGAATAATTGCTGC+GGG | 0.524739 | 4_2:-39302129 | None:intergenic |
| GTTGATATTGAGCATGATAA+CGG | 0.525710 | 4_2:+39302011 | Msa0599520:CDS |
| TGAGGTCTCCGGAGAAAAGA+AGG | 0.526705 | 4_2:+39298634 | Msa0599520:CDS |
| CTCAGTTAAACAAAGAGGAT+GGG | 0.527683 | 4_2:+39300266 | Msa0599520:CDS |
| ATCACCTCCAAGATATTCAC+CGG | 0.528176 | 4_2:+39298151 | Msa0599520:CDS |
| TGGAATGGCATTACAGGTGA+AGG | 0.528941 | 4_2:+39302073 | Msa0599520:CDS |
| TGAGGGATAAACTTGACAAA+AGG | 0.534124 | 4_2:+39298123 | Msa0599520:CDS |
| ATATACAGCCGAAGGAATCC+AGG | 0.536998 | 4_2:+39301940 | Msa0599520:intron |
| TTCTAGAATTGGTGCTGATG+AGG | 0.537743 | 4_2:+39300676 | Msa0599520:CDS |
| GCTCAGTTAAACAAAGAGGA+TGG | 0.540853 | 4_2:+39300265 | Msa0599520:CDS |
| TTATGTGCGCTTTATCAGAA+TGG | 0.542420 | 4_2:+39295529 | Msa0599520:CDS |
| TCCCCGCAGCAATTATTCGC+AGG | 0.545017 | 4_2:+39302127 | Msa0599520:CDS |
| AGAGGTCGGCAGACCATTCG+CGG | 0.553269 | 4_2:+39298185 | Msa0599520:CDS |
| CTTCTTGAACACTCTCATCC+AGG | 0.556266 | 4_2:-39300207 | None:intergenic |
| ATCTTGTGTCTAACCGCGAA+TGG | 0.556846 | 4_2:-39298198 | None:intergenic |
| CGAGCCGGTGAATATCTTGG+AGG | 0.558434 | 4_2:-39298155 | None:intergenic |
| CTGGAAGGAAAACACAAGAA+AGG | 0.561449 | 4_2:+39301670 | Msa0599520:CDS |
| GACAGAAAATGATAATGGAA+TGG | 0.562419 | 4_2:+39302058 | Msa0599520:CDS |
| CTAGTTAAACCATGTCCACA+TGG | 0.563579 | 4_2:-39302304 | None:intergenic |
| TCAACTTTGAACAATTCGAT+CGG | 0.563735 | 4_2:-39295471 | None:intergenic |
| AGCAGCAGCCCATGTGGACA+TGG | 0.566741 | 4_2:+39302295 | Msa0599520:CDS |
| AAGATATTCACCGGCTCGAG+AGG | 0.567135 | 4_2:+39298160 | Msa0599520:CDS |
| TAACTTAATGTGCAGTATGA+GGG | 0.569651 | 4_2:+39302227 | Msa0599520:intron |
| GATCACAGGTCCGACTTCAA+AGG | 0.571245 | 4_2:+39300627 | Msa0599520:intron |
| GACAACATGAGCTGCCATGC+TGG | 0.571700 | 4_2:-39301979 | None:intergenic |
| GGATGAGAGTGTTCAAGAAG+TGG | 0.580126 | 4_2:+39300210 | Msa0599520:CDS |
| TCAGTTAAACAAAGAGGATG+GGG | 0.582580 | 4_2:+39300267 | Msa0599520:CDS |
| GAACCGAAAATCCCAACTAT+CGG | 0.583849 | 4_2:+39299845 | Msa0599520:CDS |
| TGAGCTGCCATGCTGGTTGA+CGG | 0.590544 | 4_2:-39301972 | None:intergenic |
| ATTTAGGTAATAATGACTTG+AGG | 0.602441 | 4_2:+39298105 | Msa0599520:CDS |
| GATCTCCGAACCTTTGAAGT+CGG | 0.606184 | 4_2:-39300637 | None:intergenic |
| GCATGCAGAACGAGATTCTG+TGG | 0.606610 | 4_2:+39300805 | Msa0599520:CDS |
| TCAGTTGAAACAGCAAGAAG+CGG | 0.613051 | 4_2:+39301553 | Msa0599520:CDS |
| TACTTCAATTCCATTATCAG+GGG | 0.616698 | 4_2:-39301632 | None:intergenic |
| AAGAGTATTTCTAGAACCAG+AGG | 0.619782 | 4_2:-39299677 | None:intergenic |
| GGAATGGCATTACAGGTGAA+GGG | 0.625351 | 4_2:+39302074 | Msa0599520:CDS |
| TGAAGTGCCGTCAACCAGCA+TGG | 0.625663 | 4_2:+39301965 | Msa0599520:CDS |
| TGGTTCTAGAAATACTCTTG+AGG | 0.626257 | 4_2:+39299681 | Msa0599520:CDS |
| GGCAGCTCATGTTGTCGATG+AGG | 0.635035 | 4_2:+39301986 | Msa0599520:CDS |
| TGTGGATGGTCTTGATGAAG+AGG | 0.636361 | 4_2:+39302268 | Msa0599520:CDS |
| TGAGGCTCAGTTAAACAAAG+AGG | 0.640733 | 4_2:+39300261 | Msa0599520:CDS |
| GGAGAAGTAACGCTGAACAC+TGG | 0.644160 | 4_2:-39295300 | None:intergenic |
| TAACCTGCGAATAATTGCTG+CGG | 0.648704 | 4_2:-39302130 | None:intergenic |
| AACGAGAATGTGGATGTGGA+TGG | 0.650385 | 4_2:+39302254 | Msa0599520:CDS |
| ATCGATTGACAAGAGTTGTG+AGG | 0.651602 | 4_2:+39301606 | Msa0599520:CDS |
| TCACCGGCTCGAGAGGCAAG+AGG | 0.653046 | 4_2:+39298167 | Msa0599520:CDS |
| CATAATTTGGAACACAACGG+CGG | 0.658852 | 4_2:+39300761 | Msa0599520:CDS |
| CGGCTCGAGAGGCAAGAGGT+CGG | 0.660465 | 4_2:+39298171 | Msa0599520:CDS |
| GGTGCAATGACAGAAGACAT+AGG | 0.667541 | 4_2:+39299560 | Msa0599520:intron |
| AAACATAATTTGGAACACAA+CGG | 0.668028 | 4_2:+39300758 | Msa0599520:CDS |
| AAACAGCAAGAAGCGGAAAG+CGG | 0.668812 | 4_2:+39301560 | Msa0599520:CDS |
| TCTAGGCACCAAGATCTGGA+AGG | 0.672774 | 4_2:+39301655 | Msa0599520:CDS |
| AGGAGAAAACAGGATATCAG+TGG | 0.680364 | 4_2:+39299580 | Msa0599520:CDS |
| TAGTTAAACCATGTCCACAT+GGG | 0.685652 | 4_2:-39302303 | None:intergenic |
| GATTGACAAGAGTTGTGAGG+AGG | 0.689653 | 4_2:+39301609 | Msa0599520:CDS |
| AACACTGGTAGAGCTACTCG+TGG | 0.699304 | 4_2:-39295285 | None:intergenic |
| GCTGCGGGGAATCAAATCTG+GGG | 0.713601 | 4_2:-39302114 | None:intergenic |
| TCTGTGGAAGAGTTACAACA+AGG | 0.739554 | 4_2:+39300821 | Msa0599520:CDS |
| ACCTGCGAATAATTGCTGCG+GGG | 0.744720 | 4_2:-39302128 | None:intergenic |
| TTGCAGAATATAGTCCACTG+AGG | 0.772392 | 4_2:+39298616 | Msa0599520:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTGTAATTTTAGTTA+CGG | + | chr4_2:39299158-39299177 | Msa0599520:intron | 10.0% |
| !! | AAAAAGAATAAATAAAAAAC+AGG | - | chr4_2:39300391-39300410 | None:intergenic | 10.0% |
| !!! | AAATACATTCTTTAATTTTT+TGG | + | chr4_2:39300566-39300585 | Msa0599520:intron | 10.0% |
| !!! | AATACATTCTTTAATTTTTT+GGG | + | chr4_2:39300567-39300586 | Msa0599520:intron | 10.0% |
| !! | TAATAGTTGTTAATTATAAA+TGG | + | chr4_2:39301099-39301118 | Msa0599520:intron | 10.0% |
| !!! | CATATACTAATAATTTTATT+TGG | + | chr4_2:39301367-39301386 | Msa0599520:intron | 10.0% |
| !!! | TTCAATTATTTTTTGGATTT+TGG | + | chr4_2:39296549-39296568 | Msa0599520:intron | 15.0% |
| !! | TATGATATAAGTTTAATCTA+TGG | + | chr4_2:39296827-39296846 | Msa0599520:intron | 15.0% |
| !! | ATGATATAAGTTTAATCTAT+GGG | + | chr4_2:39296828-39296847 | Msa0599520:intron | 15.0% |
| !! | ATTAATATGTTCAATTTCAA+CGG | + | chr4_2:39297190-39297209 | Msa0599520:intron | 15.0% |
| !! | AATTCATATATGAAATGATT+GGG | - | chr4_2:39297493-39297512 | None:intergenic | 15.0% |
| !! | TACAAATGATATATAATACA+AGG | - | chr4_2:39299033-39299052 | None:intergenic | 15.0% |
| !!! | TTTTTTGTAATTTTAGTTAC+GGG | + | chr4_2:39299159-39299178 | Msa0599520:intron | 15.0% |
| !!! | TATAATGGAATGAAATTAAA+TGG | - | chr4_2:39299406-39299425 | None:intergenic | 15.0% |
| !!! | TTTGGTAAATATAGTTATTT+TGG | + | chr4_2:39300851-39300870 | Msa0599520:intron | 15.0% |
| !!! | CTAAATTTTTTAAAAACTAG+AGG | - | chr4_2:39301074-39301093 | None:intergenic | 15.0% |
| !!! | AATTTTTTAATATGTGTCTT+TGG | - | chr4_2:39301267-39301286 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAGGTTCGAT+GGG | - | chr4_2:39295368-39295387 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAAAGGTTCGA+TGG | - | chr4_2:39295369-39295388 | None:intergenic | 20.0% |
| !! | GAGTACAACTAATAAAAAAA+GGG | - | chr4_2:39296011-39296030 | None:intergenic | 20.0% |
| !!! | TTTGCACTTCAATTATTTTT+TGG | + | chr4_2:39296542-39296561 | Msa0599520:intron | 20.0% |
| !! | TGATATAAGTTTAATCTATG+GGG | + | chr4_2:39296829-39296848 | Msa0599520:intron | 20.0% |
| !! | TGAGGAAATAAATTATATAG+TGG | + | chr4_2:39296948-39296967 | Msa0599520:intron | 20.0% |
| !! | ATGTGAATTAATTAGATTAC+AGG | - | chr4_2:39296993-39297012 | None:intergenic | 20.0% |
| !! | TGTTATTCCATATATTTATC+TGG | + | chr4_2:39297037-39297056 | Msa0599520:intron | 20.0% |
| !! | ATTGAATCCAGATAAATATA+TGG | - | chr4_2:39297047-39297066 | None:intergenic | 20.0% |
| !! | GAATTCATATATGAAATGAT+TGG | - | chr4_2:39297494-39297513 | None:intergenic | 20.0% |
| !!! | ATGATATATGATATTCCTTT+TGG | + | chr4_2:39297573-39297592 | Msa0599520:intron | 20.0% |
| !! | AAAATGTAAAATTGCTATCA+TGG | - | chr4_2:39298323-39298342 | None:intergenic | 20.0% |
| !! | GCTTAAATATCTCTTAAAAA+TGG | - | chr4_2:39298395-39298414 | None:intergenic | 20.0% |
| !!! | TTTCTTATTTATCATTCATG+AGG | - | chr4_2:39298853-39298872 | None:intergenic | 20.0% |
| !! | AAGTATATATTTATCACATC+TGG | - | chr4_2:39298908-39298927 | None:intergenic | 20.0% |
| !!! | TTTTTGTAATTTTAGTTACG+GGG | + | chr4_2:39299160-39299179 | Msa0599520:intron | 20.0% |
| !! | ATATTTGATGTGCAAATTAA+AGG | - | chr4_2:39299487-39299506 | None:intergenic | 20.0% |
| !!! | ATCATTTTTTCTTCTTTAAC+TGG | - | chr4_2:39299655-39299674 | None:intergenic | 20.0% |
| !!! | CACATGTTTATTTTTATTCT+TGG | + | chr4_2:39299775-39299794 | Msa0599520:intron | 20.0% |
| !!! | TTAAATCTGATACTGATTTT+GGG | + | chr4_2:39300000-39300019 | Msa0599520:intron | 20.0% |
| !! | TGAAATATTTATCCACTTTA+AGG | + | chr4_2:39300120-39300139 | Msa0599520:intron | 20.0% |
| !!! | GTACAAATGTATATTTTTGA+AGG | + | chr4_2:39300180-39300199 | Msa0599520:intron | 20.0% |
| !! | TCAAGAATTGTAAAACTAAT+GGG | - | chr4_2:39300352-39300371 | None:intergenic | 20.0% |
| !! | ATCAAGAATTGTAAAACTAA+TGG | - | chr4_2:39300353-39300372 | None:intergenic | 20.0% |
| !! | ATTCACAATATACAAAAAGT+CGG | - | chr4_2:39300998-39301017 | None:intergenic | 20.0% |
| !! | TATTGTGAATAATGTAGATT+TGG | + | chr4_2:39301008-39301027 | Msa0599520:intron | 20.0% |
| !! | CATATTGAAAAAGAACATAA+AGG | + | chr4_2:39301159-39301178 | Msa0599520:intron | 20.0% |
| !! | TACTAATTCAATTAATTCCA+TGG | + | chr4_2:39301731-39301750 | Msa0599520:intron | 20.0% |
| ! | TGAAAATTCACCATTATAGT+TGG | - | chr4_2:39295617-39295636 | None:intergenic | 25.0% |
| !!! | GTTTTGTTTTTTGTTGAGAT+AGG | + | chr4_2:39295668-39295687 | Msa0599520:intron | 25.0% |
| ! | GGAGTACAACTAATAAAAAA+AGG | - | chr4_2:39296012-39296031 | None:intergenic | 25.0% |
| !! | TTTTATTAGTTGTACTCCTA+AGG | + | chr4_2:39296014-39296033 | Msa0599520:intron | 25.0% |
| ! | TTTATTAGTTGTACTCCTAA+GGG | + | chr4_2:39296015-39296034 | Msa0599520:intron | 25.0% |
| ! | GTAATCGAAGTTCTATATTT+AGG | - | chr4_2:39296319-39296338 | None:intergenic | 25.0% |
| !!! | AACTAATCACTATTGTTTTG+CGG | + | chr4_2:39296384-39296403 | Msa0599520:intron | 25.0% |
| !! | TACAAAGTGTTATCAAATAG+CGG | + | chr4_2:39296419-39296438 | Msa0599520:intron | 25.0% |
| !! | ATTGTACCTGTTTTATATCA+AGG | + | chr4_2:39296589-39296608 | Msa0599520:intron | 25.0% |
| !! | GAAAAGAAATATAGTTTGTC+AGG | - | chr4_2:39296623-39296642 | None:intergenic | 25.0% |
| !! | GACAAACTATATTTCTTTTC+TGG | + | chr4_2:39296623-39296642 | Msa0599520:intron | 25.0% |
| ! | ATTCAATACTCTTAAAACAG+AGG | + | chr4_2:39297060-39297079 | Msa0599520:intron | 25.0% |
| ! | TGGATGCTTATCTAATAATA+TGG | + | chr4_2:39297086-39297105 | Msa0599520:intron | 25.0% |
| !! | TGTTTGACATAGTATTTTCT+TGG | + | chr4_2:39297338-39297357 | Msa0599520:intron | 25.0% |
| ! | TCTTTATTACTTAAGCATCT+TGG | + | chr4_2:39297688-39297707 | Msa0599520:intron | 25.0% |
| ! | ACATAATATATAACCTCGAA+TGG | - | chr4_2:39297724-39297743 | None:intergenic | 25.0% |
| ! | AAAGATATAAGCTACATACA+TGG | + | chr4_2:39297811-39297830 | Msa0599520:intron | 25.0% |
| ! | AAGATATAAGCTACATACAT+GGG | + | chr4_2:39297812-39297831 | Msa0599520:intron | 25.0% |
| ! | ACTATATCTGTCATAATTTG+AGG | + | chr4_2:39297839-39297858 | Msa0599520:intron | 25.0% |
| ! | CTATATCTGTCATAATTTGA+GGG | + | chr4_2:39297840-39297859 | Msa0599520:intron | 25.0% |
| ! | TCTCTTATTATTCCTGATAT+TGG | + | chr4_2:39297926-39297945 | Msa0599520:intron | 25.0% |
| !!! | AAAGCTTATTTTCTTATTGC+AGG | + | chr4_2:39298071-39298090 | Msa0599520:intron | 25.0% |
| ! | ATTTAGGTAATAATGACTTG+AGG | + | chr4_2:39298105-39298124 | Msa0599520:CDS | 25.0% |
| ! | TTTAGGTAATAATGACTTGA+GGG | + | chr4_2:39298106-39298125 | Msa0599520:CDS | 25.0% |
| !!! | TTTTTAGTTTAGTCATACCA+TGG | + | chr4_2:39298258-39298277 | Msa0599520:intron | 25.0% |
| ! | ATTTCAATTCATGGAACATT+AGG | - | chr4_2:39298597-39298616 | None:intergenic | 25.0% |
| ! | TATTCTGCAATTTCAATTCA+TGG | - | chr4_2:39298606-39298625 | None:intergenic | 25.0% |
| !! | TTAATTTACCTTCTTTTCTC+CGG | - | chr4_2:39298645-39298664 | None:intergenic | 25.0% |
| ! | GATATATAATACAAGGACAT+GGG | - | chr4_2:39299026-39299045 | None:intergenic | 25.0% |
| ! | TGATATATAATACAAGGACA+TGG | - | chr4_2:39299027-39299046 | None:intergenic | 25.0% |
| ! | CATTTGTAATTGTTAGTTGA+TGG | + | chr4_2:39299045-39299064 | Msa0599520:intron | 25.0% |
| ! | ATGGAATTCTATTCTATGTT+TGG | + | chr4_2:39299288-39299307 | Msa0599520:intron | 25.0% |
| !!! | GGTTATTTTGATTCAACTAA+AGG | + | chr4_2:39299353-39299372 | Msa0599520:intron | 25.0% |
| !!! | TGGTTCTATTTTGTACTATT+TGG | - | chr4_2:39299386-39299405 | None:intergenic | 25.0% |
| ! | TTTATACTAAATCATAGACG+AGG | - | chr4_2:39299526-39299545 | None:intergenic | 25.0% |
| !! | TAGTTTTTGTCTCTTGTATT+TGG | + | chr4_2:39299869-39299888 | Msa0599520:intron | 25.0% |
| !!! | CTTAAATCTGATACTGATTT+TGG | + | chr4_2:39299999-39300018 | Msa0599520:intron | 25.0% |
| ! | TTTCATTAATCTTCTCAAGA+CGG | - | chr4_2:39300040-39300059 | None:intergenic | 25.0% |
| ! | TTCACATTATTTCAGAGAAA+TGG | - | chr4_2:39300076-39300095 | None:intergenic | 25.0% |
| !!! | ATATTTATCCACTTTAAGGT+TGG | + | chr4_2:39300124-39300143 | Msa0599520:intron | 25.0% |
| ! | AATTTAATCCAACCTTAAAG+TGG | - | chr4_2:39300135-39300154 | None:intergenic | 25.0% |
| ! | CAAGAATTGTAAAACTAATG+GGG | - | chr4_2:39300351-39300370 | None:intergenic | 25.0% |
| !!! | CCTTATTTTTGAAGTAATTC+TGG | - | chr4_2:39300431-39300450 | None:intergenic | 25.0% |
| ! | CCAGAATTACTTCAAAAATA+AGG | + | chr4_2:39300428-39300447 | Msa0599520:intron | 25.0% |
| !! | AAACATAATTTGGAACACAA+CGG | + | chr4_2:39300758-39300777 | Msa0599520:CDS | 25.0% |
| ! | ATACTTCAATTCCATTATCA+GGG | - | chr4_2:39301636-39301655 | None:intergenic | 25.0% |
| !! | ATAATGGAATTGAAGTATCT+AGG | + | chr4_2:39301638-39301657 | Msa0599520:CDS | 25.0% |
| ! | TAACAACATTCATTCAGAAA+AGG | + | chr4_2:39301708-39301727 | Msa0599520:CDS | 25.0% |
| !! | TTTATCTGTTGCATTCTTTT+TGG | + | chr4_2:39301795-39301814 | Msa0599520:intron | 25.0% |
| !! | TTATCTGTTGCATTCTTTTT+GGG | + | chr4_2:39301796-39301815 | Msa0599520:intron | 25.0% |
| !! | CACTACATAAGATTTTCAAA+AGG | + | chr4_2:39301872-39301891 | Msa0599520:intron | 25.0% |
| !! | TTAAAGCATTATGTTGAAGA+AGG | + | chr4_2:39302375-39302394 | Msa0599520:three_prime_UTR | 25.0% |
| !! | TTGAAGAAGGATTTTCTAAT+AGG | + | chr4_2:39302388-39302407 | Msa0599520:three_prime_UTR | 25.0% |
| ! | AAAACCCAAAAAAATGACAT+AGG | - | chr4_2:39302551-39302570 | None:intergenic | 25.0% |
| TTGAAGAAGAAAAGAAAGAG+TGG | - | chr4_2:39295324-39295343 | None:intergenic | 30.0% | |
| ! | TCTTTTCTTCTTCAACTTCA+AGG | + | chr4_2:39295329-39295348 | Msa0599520:CDS | 30.0% |
| TCAACTTTGAACAATTCGAT+CGG | - | chr4_2:39295474-39295493 | None:intergenic | 30.0% | |
| ! | CGATTTTCTTCCAACTATAA+TGG | + | chr4_2:39295604-39295623 | Msa0599520:CDS | 30.0% |
| !!! | GTTTTTTGTTGAGATAGGTT+TGG | + | chr4_2:39295673-39295692 | Msa0599520:intron | 30.0% |
| ! | AGATAGGTTTGGATTTGTTT+GGG | + | chr4_2:39295684-39295703 | Msa0599520:intron | 30.0% |
| ATTGTTAGTTGAGGGATATT+TGG | + | chr4_2:39295774-39295793 | Msa0599520:intron | 30.0% | |
| ! | TATTTGGTGGATGTAAATTG+TGG | + | chr4_2:39295790-39295809 | Msa0599520:intron | 30.0% |
| AATTATTACTTGTACCCCTA+AGG | + | chr4_2:39295814-39295833 | Msa0599520:intron | 30.0% | |
| ATTATTACTTGTACCCCTAA+GGG | + | chr4_2:39295815-39295834 | Msa0599520:intron | 30.0% | |
| ! | GACTATTTGAGTTTATCTAC+TGG | + | chr4_2:39296050-39296069 | Msa0599520:intron | 30.0% |
| TTTGCGAGAACTTACAAAAA+GGG | + | chr4_2:39296098-39296117 | Msa0599520:intron | 30.0% | |
| !! | GTTGTTTTCATAAGCTATCT+TGG | - | chr4_2:39296168-39296187 | None:intergenic | 30.0% |
| ATGCTTATGATATAAGTTGC+AGG | + | chr4_2:39296268-39296287 | Msa0599520:intron | 30.0% | |
| !! | TAAGTGTTGTTTGTCCAAAA+TGG | + | chr4_2:39296292-39296311 | Msa0599520:intron | 30.0% |
| !! | AAGTGTTGTTTGTCCAAAAT+GGG | + | chr4_2:39296293-39296312 | Msa0599520:intron | 30.0% |
| ! | TTCTATATTTAGGCCCATTT+TGG | - | chr4_2:39296309-39296328 | None:intergenic | 30.0% |
| CAAGAACCTTGATATAAAAC+AGG | - | chr4_2:39296598-39296617 | None:intergenic | 30.0% | |
| TGTTTGTAAGTTCTTCATTC+AGG | - | chr4_2:39296672-39296691 | None:intergenic | 30.0% | |
| !! | ATAACGTACTTAACTTGCAT+GGG | + | chr4_2:39296878-39296897 | Msa0599520:intron | 30.0% |
| CATTGCATGAAGAAAATTTG+AGG | + | chr4_2:39296930-39296949 | Msa0599520:intron | 30.0% | |
| ATATAGTGGTGACACATTAT+CGG | + | chr4_2:39296962-39296981 | Msa0599520:intron | 30.0% | |
| ATATGTTCAATTTCAACGGT+AGG | + | chr4_2:39297194-39297213 | Msa0599520:intron | 30.0% | |
| ACACTTGTTCTGCATATTTA+TGG | - | chr4_2:39297385-39297404 | None:intergenic | 30.0% | |
| TGGATCTTATGATATTCCTT+TGG | + | chr4_2:39297527-39297546 | Msa0599520:intron | 30.0% | |
| GGATCTTATGATATTCCTTT+GGG | + | chr4_2:39297528-39297547 | Msa0599520:intron | 30.0% | |
| ATATCAAATCACATAGCCTT+CGG | + | chr4_2:39297660-39297679 | Msa0599520:intron | 30.0% | |
| !! | ATATCTTTGAAGTGCAATCA+AGG | - | chr4_2:39297799-39297818 | None:intergenic | 30.0% |
| GAACATTAGGAAAGAGAAAA+GGG | - | chr4_2:39298584-39298603 | None:intergenic | 30.0% | |
| ACATTAGCAACAGAAATGAA+AGG | - | chr4_2:39298698-39298717 | None:intergenic | 30.0% | |
| ACATACTTGAGAGTTTGAAA+GGG | + | chr4_2:39298774-39298793 | Msa0599520:intron | 30.0% | |
| ! | TAACACAAGGCATTAATTCA+TGG | - | chr4_2:39298936-39298955 | None:intergenic | 30.0% |
| CAATTGAACGTAATAACACA+AGG | - | chr4_2:39298949-39298968 | None:intergenic | 30.0% | |
| !! | GTTGATGGTATTATGTTCAT+TGG | + | chr4_2:39299060-39299079 | Msa0599520:intron | 30.0% |
| ! | TTCATGAAACTTATTTGCTG+TGG | + | chr4_2:39299110-39299129 | Msa0599520:intron | 30.0% |
| !! | TCATGAAACTTATTTGCTGT+GGG | + | chr4_2:39299111-39299130 | Msa0599520:intron | 30.0% |
| ATTCTTACTCTCAATACACT+TGG | + | chr4_2:39299228-39299247 | Msa0599520:intron | 30.0% | |
| GCATGATTTGATTAAGAATG+TGG | + | chr4_2:39299332-39299351 | Msa0599520:intron | 30.0% | |
| TTGATGTGCAAATTAAAGGT+TGG | - | chr4_2:39299483-39299502 | None:intergenic | 30.0% | |
| AACTTCCAGAAATATCACTT+TGG | - | chr4_2:39299606-39299625 | None:intergenic | 30.0% | |
| GAAGAAAAAATGATTTCCTC+TGG | + | chr4_2:39299661-39299680 | Msa0599520:CDS | 30.0% | |
| GAACAAACAAGAGAATGTAT+TGG | - | chr4_2:39299748-39299767 | None:intergenic | 30.0% | |
| ACAAAAACTAACCGATAGTT+GGG | - | chr4_2:39299859-39299878 | None:intergenic | 30.0% | |
| !!! | GATTTCAAGTCTTTGTTTTG+AGG | + | chr4_2:39299976-39299995 | Msa0599520:intron | 30.0% |
| !! | TAGCCTTAATTCTAGAATTC+AGG | + | chr4_2:39300234-39300253 | Msa0599520:CDS | 30.0% |
| !! | GTTCCTGAATTCTAGAATTA+AGG | - | chr4_2:39300240-39300259 | None:intergenic | 30.0% |
| AATTGTAAAACTAATGGGGA+TGG | - | chr4_2:39300347-39300366 | None:intergenic | 30.0% | |
| !! | TTGTTTTGTATGTAGATCAC+AGG | + | chr4_2:39300613-39300632 | Msa0599520:intron | 30.0% |
| !! | TTCTCAGACATTTCTAGAAT+TGG | + | chr4_2:39300665-39300684 | Msa0599520:CDS | 30.0% |
| ! | AATTATGTTTGGTGATTGGA+GGG | - | chr4_2:39300748-39300767 | None:intergenic | 30.0% |
| ! | AAATTATGTTTGGTGATTGG+AGG | - | chr4_2:39300749-39300768 | None:intergenic | 30.0% |
| TCCAATCACCAAACATAATT+TGG | + | chr4_2:39300748-39300767 | Msa0599520:CDS | 30.0% | |
| ! | TCCAAATTATGTTTGGTGAT+TGG | - | chr4_2:39300752-39300771 | None:intergenic | 30.0% |
| GTTGTGTTCCAAATTATGTT+TGG | - | chr4_2:39300759-39300778 | None:intergenic | 30.0% | |
| AAAATGTCTTTCATCTGTGT+GGG | + | chr4_2:39300929-39300948 | Msa0599520:intron | 30.0% | |
| TGAAATGAAACAAGAATACG+AGG | - | chr4_2:39301141-39301160 | None:intergenic | 30.0% | |
| AACATAAAGGTCTGTGTATA+TGG | + | chr4_2:39301172-39301191 | Msa0599520:intron | 30.0% | |
| ! | TATGTAATTTTTCCTGACCT+TGG | + | chr4_2:39301202-39301221 | Msa0599520:intron | 30.0% |
| !!! | GATTGTCATTTTAAACCAGT+TGG | + | chr4_2:39301300-39301319 | Msa0599520:intron | 30.0% |
| TACTTCAATTCCATTATCAG+GGG | - | chr4_2:39301635-39301654 | None:intergenic | 30.0% | |
| GATACTTCAATTCCATTATC+AGG | - | chr4_2:39301637-39301656 | None:intergenic | 30.0% | |
| GAAAACACAAGAAAGGAATA+TGG | + | chr4_2:39301677-39301696 | Msa0599520:CDS | 30.0% | |
| ATGACTGTAACAAAAGAAAC+CGG | - | chr4_2:39301825-39301844 | None:intergenic | 30.0% | |
| ! | AGATTTTCAAAAGGTTACTG+TGG | + | chr4_2:39301881-39301900 | Msa0599520:intron | 30.0% |
| TGTATATTCATGGGTATGAA+TGG | - | chr4_2:39301927-39301946 | None:intergenic | 30.0% | |
| GTTGATATTGAGCATGATAA+CGG | + | chr4_2:39302011-39302030 | Msa0599520:CDS | 30.0% | |
| TCAAGGACAGAAAATGATAA+TGG | + | chr4_2:39302053-39302072 | Msa0599520:CDS | 30.0% | |
| !! | GACAGAAAATGATAATGGAA+TGG | + | chr4_2:39302058-39302077 | Msa0599520:CDS | 30.0% |
| TTAACTTAATGTGCAGTATG+AGG | + | chr4_2:39302226-39302245 | Msa0599520:intron | 30.0% | |
| TAACTTAATGTGCAGTATGA+GGG | + | chr4_2:39302227-39302246 | Msa0599520:intron | 30.0% | |
| CATGGTTTAACTAGTATTTG+TGG | + | chr4_2:39302313-39302332 | Msa0599520:exon | 30.0% | |
| !!! | TGGTTTCTAGCTTTTTGTTT+TGG | + | chr4_2:39302333-39302352 | Msa0599520:three_prime_UTR | 30.0% |
| !!! | GGTTTCTAGCTTTTTGTTTT+GGG | + | chr4_2:39302334-39302353 | Msa0599520:three_prime_UTR | 30.0% |
| !!! | GTTTCTAGCTTTTTGTTTTG+GGG | + | chr4_2:39302335-39302354 | Msa0599520:three_prime_UTR | 30.0% |
| !!! | TTTCTAGCTTTTTGTTTTGG+GGG | + | chr4_2:39302336-39302355 | Msa0599520:three_prime_UTR | 30.0% |
| ! | GAAGGATTTTCTAATAGGAT+AGG | + | chr4_2:39302393-39302412 | Msa0599520:three_prime_UTR | 30.0% |
| !!! | ACATGCCTATGTCATTTTTT+TGG | + | chr4_2:39302543-39302562 | Msa0599520:three_prime_UTR | 30.0% |
| !!! | CATGCCTATGTCATTTTTTT+GGG | + | chr4_2:39302544-39302563 | Msa0599520:three_prime_UTR | 30.0% |
| TTATGTGCGCTTTATCAGAA+TGG | + | chr4_2:39295529-39295548 | Msa0599520:CDS | 35.0% | |
| ! | AGAACTGTTCTTTTGCACAT+GGG | + | chr4_2:39295566-39295585 | Msa0599520:CDS | 35.0% |
| ! | GAGATAGGTTTGGATTTGTT+TGG | + | chr4_2:39295683-39295702 | Msa0599520:intron | 35.0% |
| AGTGGTTTGATTGTTAGTTG+AGG | + | chr4_2:39295765-39295784 | Msa0599520:intron | 35.0% | |
| GTGGTTTGATTGTTAGTTGA+GGG | + | chr4_2:39295766-39295785 | Msa0599520:intron | 35.0% | |
| TTATTACTTGTACCCCTAAG+GGG | + | chr4_2:39295816-39295835 | Msa0599520:intron | 35.0% | |
| AGCCTCTTGTGTAAAAATCA+GGG | + | chr4_2:39295906-39295925 | Msa0599520:intron | 35.0% | |
| ! | TACCCTGATTTTTACACAAG+AGG | - | chr4_2:39295911-39295930 | None:intergenic | 35.0% |
| CTCAAATAGTCAATCCAAAC+AGG | - | chr4_2:39296041-39296060 | None:intergenic | 35.0% | |
| CTTTGCGAGAACTTACAAAA+AGG | + | chr4_2:39296097-39296116 | Msa0599520:intron | 35.0% | |
| AAATAAGTAGCATAGCGTAG+CGG | + | chr4_2:39296355-39296374 | Msa0599520:intron | 35.0% | |
| TTATCAAATAGCGGCTATTG+TGG | + | chr4_2:39296428-39296447 | Msa0599520:intron | 35.0% | |
| GTCATAATGTAAGTCCGTTA+TGG | - | chr4_2:39296505-39296524 | None:intergenic | 35.0% | |
| !! | GATAACGTACTTAACTTGCA+TGG | + | chr4_2:39296877-39296896 | Msa0599520:intron | 35.0% |
| !! | TAACGTACTTAACTTGCATG+GGG | + | chr4_2:39296879-39296898 | Msa0599520:intron | 35.0% |
| TACTCTTAAAACAGAGGATC+TGG | + | chr4_2:39297066-39297085 | Msa0599520:intron | 35.0% | |
| ATCTCCTTTCACAGAATCAA+TGG | - | chr4_2:39297121-39297140 | None:intergenic | 35.0% | |
| CATACGTATGCAATAACACA+TGG | + | chr4_2:39297148-39297167 | Msa0599520:intron | 35.0% | |
| ! | TGCCAATTGGTTTATCTTAG+AGG | + | chr4_2:39297303-39297322 | Msa0599520:intron | 35.0% |
| !! | TGCCTCTAAGATAAACCAAT+TGG | - | chr4_2:39297308-39297327 | None:intergenic | 35.0% |
| TTTCCTGAAGGATCTTAATC+AGG | + | chr4_2:39297404-39297423 | Msa0599520:intron | 35.0% | |
| TGAATTCCACTACTTAAGAG+TGG | + | chr4_2:39297507-39297526 | Msa0599520:intron | 35.0% | |
| TAAGATCCACTCTTAAGTAG+TGG | - | chr4_2:39297516-39297535 | None:intergenic | 35.0% | |
| AGTAATAAAGATCCATCCGA+AGG | - | chr4_2:39297679-39297698 | None:intergenic | 35.0% | |
| !!! | ATCTACTTTTTGCTCTTACG+TGG | + | chr4_2:39297874-39297893 | Msa0599520:intron | 35.0% |
| !!! | TCTACTTTTTGCTCTTACGT+GGG | + | chr4_2:39297875-39297894 | Msa0599520:intron | 35.0% |
| ATTCCTGATATTGGTAAGCT+TGG | + | chr4_2:39297935-39297954 | Msa0599520:intron | 35.0% | |
| ATACCAAGCTTACCAATATC+AGG | - | chr4_2:39297941-39297960 | None:intergenic | 35.0% | |
| TGAGGGATAAACTTGACAAA+AGG | + | chr4_2:39298123-39298142 | Msa0599520:CDS | 35.0% | |
| AACGAGAACAAGCAGAAATA+AGG | - | chr4_2:39298224-39298243 | None:intergenic | 35.0% | |
| GGTTCAAAGTCACTTGAAAA+AGG | + | chr4_2:39298288-39298307 | Msa0599520:intron | 35.0% | |
| TATAACTTCAGAAGGAAGCA+AGG | - | chr4_2:39298488-39298507 | None:intergenic | 35.0% | |
| ATGTCAGCTATAACTTCAGA+AGG | - | chr4_2:39298496-39298515 | None:intergenic | 35.0% | |
| GGAACATTAGGAAAGAGAAA+AGG | - | chr4_2:39298585-39298604 | None:intergenic | 35.0% | |
| GACATACTTGAGAGTTTGAA+AGG | + | chr4_2:39298773-39298792 | Msa0599520:intron | 35.0% | |
| CATACTTGAGAGTTTGAAAG+GGG | + | chr4_2:39298775-39298794 | Msa0599520:intron | 35.0% | |
| ATACTTGAGAGTTTGAAAGG+GGG | + | chr4_2:39298776-39298795 | Msa0599520:intron | 35.0% | |
| AGATGAGACATGTCAAAACA+TGG | + | chr4_2:39299269-39299288 | Msa0599520:intron | 35.0% | |
| ATGAATGTAATATCTCCGTC+AGG | + | chr4_2:39299456-39299475 | Msa0599520:intron | 35.0% | |
| TGAATGTAATATCTCCGTCA+GGG | + | chr4_2:39299457-39299476 | Msa0599520:intron | 35.0% | |
| GTATAAACATTAGCAACTCC+TGG | + | chr4_2:39299539-39299558 | Msa0599520:intron | 35.0% | |
| !! | AAGAGTATTTCTAGAACCAG+AGG | - | chr4_2:39299680-39299699 | None:intergenic | 35.0% |
| !! | TGGTTCTAGAAATACTCTTG+AGG | + | chr4_2:39299681-39299700 | Msa0599520:CDS | 35.0% |
| TAGAAATACTCTTGAGGATC+AGG | + | chr4_2:39299687-39299706 | Msa0599520:CDS | 35.0% | |
| ! | TAACCGATAGTTGGGATTTT+CGG | - | chr4_2:39299851-39299870 | None:intergenic | 35.0% |
| GACAAAAACTAACCGATAGT+TGG | - | chr4_2:39299860-39299879 | None:intergenic | 35.0% | |
| ! | CAATTTTTCCTCTCTGAACA+GGG | - | chr4_2:39299921-39299940 | None:intergenic | 35.0% |
| TTCAGAGAGGAAAAATTGGA+GGG | + | chr4_2:39299923-39299942 | Msa0599520:intron | 35.0% | |
| GAGGGCAAAATCATCTTATA+GGG | + | chr4_2:39299941-39299960 | Msa0599520:intron | 35.0% | |
| AGGGCAAAATCATCTTATAG+GGG | + | chr4_2:39299942-39299961 | Msa0599520:intron | 35.0% | |
| !! | TATATTTTTGAAGGTCTGCC+TGG | + | chr4_2:39300189-39300208 | Msa0599520:intron | 35.0% |
| !! | TTCTAGAATTCAGGAACTTG+AGG | + | chr4_2:39300243-39300262 | Msa0599520:CDS | 35.0% |
| TCGAATGCACAATCAGAAAT+TGG | + | chr4_2:39300459-39300478 | Msa0599520:intron | 35.0% | |
| !! | AGCGTTGATATTGTAAGCAA+TGG | + | chr4_2:39300707-39300726 | Msa0599520:CDS | 35.0% |
| TTACAACAAGGTCAGTAGTT+TGG | + | chr4_2:39300833-39300852 | Msa0599520:intron | 35.0% | |
| ACCTTTGCTAAGCAAAACAT+TGG | + | chr4_2:39300892-39300911 | Msa0599520:intron | 35.0% | |
| CCTTTGCTAAGCAAAACATT+GGG | + | chr4_2:39300893-39300912 | Msa0599520:intron | 35.0% | |
| GAAAATGTCTTTCATCTGTG+TGG | + | chr4_2:39300928-39300947 | Msa0599520:intron | 35.0% | |
| AAATGTCTTTCATCTGTGTG+GGG | + | chr4_2:39300930-39300949 | Msa0599520:intron | 35.0% | |
| TAATGTAGATTTGGCTGTTG+AGG | + | chr4_2:39301017-39301036 | Msa0599520:intron | 35.0% | |
| AATGTAGATTTGGCTGTTGA+GGG | + | chr4_2:39301018-39301037 | Msa0599520:intron | 35.0% | |
| ! | CTTATGGTTTGTAACCTGTA+TGG | + | chr4_2:39301041-39301060 | Msa0599520:intron | 35.0% |
| ! | TCATTTTAAACCAGTTGGTC+TGG | + | chr4_2:39301305-39301324 | Msa0599520:intron | 35.0% |
| AATTCAATTACCAGACCAAC+TGG | - | chr4_2:39301318-39301337 | None:intergenic | 35.0% | |
| ! | TTTTCCTTTAATCTTGCCAC+TGG | + | chr4_2:39301465-39301484 | Msa0599520:intron | 35.0% |
| TTTCCTTTAATCTTGCCACT+GGG | + | chr4_2:39301466-39301485 | Msa0599520:intron | 35.0% | |
| CTGATACCAATGAAACTTCA+AGG | + | chr4_2:39302036-39302055 | Msa0599520:CDS | 35.0% | |
| TTCTGTCCTTGAAGTTTCAT+TGG | - | chr4_2:39302045-39302064 | None:intergenic | 35.0% | |
| !! | TGATAATGGAATGGCATTAC+AGG | + | chr4_2:39302067-39302086 | Msa0599520:CDS | 35.0% |
| !!! | CTACAAGTGTCTAGCTTTTA+AGG | - | chr4_2:39302186-39302205 | None:intergenic | 35.0% |
| TAAAAACGAGAATGTGGATG+TGG | + | chr4_2:39302250-39302269 | Msa0599520:CDS | 35.0% | |
| TAGTTAAACCATGTCCACAT+GGG | - | chr4_2:39302306-39302325 | None:intergenic | 35.0% | |
| ATTCTGTACTTGTCTTTGCA+TGG | + | chr4_2:39302489-39302508 | Msa0599520:three_prime_UTR | 35.0% | |
| AAAAATGACATAGGCATGTG+AGG | - | chr4_2:39302542-39302561 | None:intergenic | 35.0% | |
| ! | CGTGTTGTTGCTGAGAAAAA+GGG | - | chr4_2:39295429-39295448 | None:intergenic | 40.0% |
| CATGTGCAAAAGAACAGTTC+TGG | - | chr4_2:39295567-39295586 | None:intergenic | 40.0% | |
| ! | CAGAACTGTTCTTTTGCACA+TGG | + | chr4_2:39295565-39295584 | Msa0599520:CDS | 40.0% |
| GTTTGGGTGAGTGAATTAGT+TGG | + | chr4_2:39295700-39295719 | Msa0599520:intron | 40.0% | |
| AAGTTCACCCCAACATTGTA+GGG | - | chr4_2:39295745-39295764 | None:intergenic | 40.0% | |
| TAAGTTCACCCCAACATTGT+AGG | - | chr4_2:39295746-39295765 | None:intergenic | 40.0% | |
| GTTAGTTGAGGGATATTTGG+TGG | + | chr4_2:39295777-39295796 | Msa0599520:intron | 40.0% | |
| TATTACTTGTACCCCTAAGG+GGG | + | chr4_2:39295817-39295836 | Msa0599520:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAATC+AGG | + | chr4_2:39295905-39295924 | Msa0599520:intron | 40.0% | |
| CTAATAAAAAAAGGGCCTCC+AGG | - | chr4_2:39296003-39296022 | None:intergenic | 40.0% | |
| ACCTCAATTCACTTGTGCTT+AGG | - | chr4_2:39296076-39296095 | None:intergenic | 40.0% | |
| TTATGGATCGCAGAGAATAG+CGG | - | chr4_2:39296488-39296507 | None:intergenic | 40.0% | |
| CTATTCTCTGCGATCCATAA+CGG | + | chr4_2:39296488-39296507 | Msa0599520:intron | 40.0% | |
| GATGGCTGTAGATATGTCAT+TGG | + | chr4_2:39296729-39296748 | Msa0599520:intron | 40.0% | |
| TCACAGAATCAATGGACGTA+TGG | - | chr4_2:39297113-39297132 | None:intergenic | 40.0% | |
| !! | ACGTCCATTGATTCTGTGAA+AGG | + | chr4_2:39297114-39297133 | Msa0599520:intron | 40.0% |
| ATGCAATAACACATGGCATG+TGG | + | chr4_2:39297155-39297174 | Msa0599520:intron | 40.0% | |
| TGCAATAACACATGGCATGT+GGG | + | chr4_2:39297156-39297175 | Msa0599520:intron | 40.0% | |
| CAACAGTCTGCAACATAAAG+TGG | - | chr4_2:39297228-39297247 | None:intergenic | 40.0% | |
| GTTTATCTTAGAGGCAATGC+TGG | + | chr4_2:39297312-39297331 | Msa0599520:intron | 40.0% | |
| AAGCCTGATTAAGATCCTTC+AGG | - | chr4_2:39297410-39297429 | None:intergenic | 40.0% | |
| GGATCTTAATCAGGCTTACA+TGG | + | chr4_2:39297413-39297432 | Msa0599520:intron | 40.0% | |
| AAAACGAAGTAACAGCCCAA+AGG | - | chr4_2:39297546-39297565 | None:intergenic | 40.0% | |
| !! | TTTGGGCTGTTACTTCGTTT+TGG | + | chr4_2:39297545-39297564 | Msa0599520:intron | 40.0% |
| !! | TCCTTTTGGCTGTTACTTCA+TGG | + | chr4_2:39297587-39297606 | Msa0599520:intron | 40.0% |
| CTACATGGACATAGGCAAAA+TGG | + | chr4_2:39297610-39297629 | Msa0599520:intron | 40.0% | |
| TGGATATGACTTTCCATTCG+AGG | + | chr4_2:39297708-39297727 | Msa0599520:intron | 40.0% | |
| AAGTGCAATCAAGGTAGCAA+TGG | - | chr4_2:39297790-39297809 | None:intergenic | 40.0% | |
| GCAGGAAAGAGAGACTATTT+AGG | + | chr4_2:39298089-39298108 | Msa0599520:intron | 40.0% | |
| ATCACCTCCAAGATATTCAC+CGG | + | chr4_2:39298151-39298170 | Msa0599520:CDS | 40.0% | |
| AGTTTAGTCATACCATGGAG+AGG | + | chr4_2:39298263-39298282 | Msa0599520:intron | 40.0% | |
| ACGACAAGTTAGGGTGAAAT+AGG | - | chr4_2:39298439-39298458 | None:intergenic | 40.0% | |
| ! | TATTTCACCCTAACTTGTCG+TGG | + | chr4_2:39298438-39298457 | Msa0599520:intron | 40.0% |
| TTGCAGAATATAGTCCACTG+AGG | + | chr4_2:39298616-39298635 | Msa0599520:intron | 40.0% | |
| TACTTGAGAGTTTGAAAGGG+GGG | + | chr4_2:39298777-39298796 | Msa0599520:intron | 40.0% | |
| !! | ACTTATTTGCTGTGGGATGA+TGG | + | chr4_2:39299118-39299137 | Msa0599520:intron | 40.0% |
| !! | CTTATTTGCTGTGGGATGAT+GGG | + | chr4_2:39299119-39299138 | Msa0599520:intron | 40.0% |
| ! | TTGATACCTAGGACTTGTTC+AGG | + | chr4_2:39299184-39299203 | Msa0599520:intron | 40.0% |
| ! | TGATACCTAGGACTTGTTCA+GGG | + | chr4_2:39299185-39299204 | Msa0599520:intron | 40.0% |
| GCTGTCAGCAAGGATTATAA+TGG | - | chr4_2:39299421-39299440 | None:intergenic | 40.0% | |
| ! | AAATTAAAGGTTGGCCCTGA+CGG | - | chr4_2:39299474-39299493 | None:intergenic | 40.0% |
| CAGAAGACATAGGAGAAAAC+AGG | + | chr4_2:39299570-39299589 | Msa0599520:intron | 40.0% | |
| AGGAGAAAACAGGATATCAG+TGG | + | chr4_2:39299580-39299599 | Msa0599520:CDS | 40.0% | |
| AGTGGCCAAAGTGATATTTC+TGG | + | chr4_2:39299598-39299617 | Msa0599520:CDS | 40.0% | |
| GAACCGAAAATCCCAACTAT+CGG | + | chr4_2:39299845-39299864 | Msa0599520:CDS | 40.0% | |
| ! | CCAATTTTTCCTCTCTGAAC+AGG | - | chr4_2:39299922-39299941 | None:intergenic | 40.0% |
| CCTGTTCAGAGAGGAAAAAT+TGG | + | chr4_2:39299919-39299938 | Msa0599520:intron | 40.0% | |
| GTTCAGAGAGGAAAAATTGG+AGG | + | chr4_2:39299922-39299941 | Msa0599520:intron | 40.0% | |
| GGAGGGCAAAATCATCTTAT+AGG | + | chr4_2:39299940-39299959 | Msa0599520:intron | 40.0% | |
| ! | ATGGGGAGTATAAAAGGTAC+TGG | + | chr4_2:39300284-39300303 | Msa0599520:intron | 40.0% |
| AGTTGCAAGATGAACTGAAG+AGG | + | chr4_2:39300482-39300501 | Msa0599520:intron | 40.0% | |
| !! | TTCTAGAATTGGTGCTGATG+AGG | + | chr4_2:39300676-39300695 | Msa0599520:CDS | 40.0% |
| GTAAGCAATGGTGAGAATAC+TGG | + | chr4_2:39300719-39300738 | Msa0599520:CDS | 40.0% | |
| ! | CATAATTTGGAACACAACGG+CGG | + | chr4_2:39300761-39300780 | Msa0599520:CDS | 40.0% |
| TCTGTGGAAGAGTTACAACA+AGG | + | chr4_2:39300821-39300840 | Msa0599520:CDS | 40.0% | |
| ! | CCCAATGTTTTGCTTAGCAA+AGG | - | chr4_2:39300896-39300915 | None:intergenic | 40.0% |
| GTTTGTAACCTGTATGGTTC+TGG | + | chr4_2:39301047-39301066 | Msa0599520:intron | 40.0% | |
| ATATACTCTAGTCCAAGGTC+AGG | - | chr4_2:39301217-39301236 | None:intergenic | 40.0% | |
| ! | TGACCTTGGACTAGAGTATA+TGG | + | chr4_2:39301216-39301235 | Msa0599520:intron | 40.0% |
| CTTCCATATACTCTAGTCCA+AGG | - | chr4_2:39301222-39301241 | None:intergenic | 40.0% | |
| TCAGTTGAAACAGCAAGAAG+CGG | + | chr4_2:39301553-39301572 | Msa0599520:CDS | 40.0% | |
| ATCGATTGACAAGAGTTGTG+AGG | + | chr4_2:39301606-39301625 | Msa0599520:CDS | 40.0% | |
| ! | TGTGTTTTCCTTCCAGATCT+TGG | - | chr4_2:39301666-39301685 | None:intergenic | 40.0% |
| CTGGAAGGAAAACACAAGAA+AGG | + | chr4_2:39301670-39301689 | Msa0599520:CDS | 40.0% | |
| !!! | TTGCATTCTTTTTGGGATGC+CGG | + | chr4_2:39301803-39301822 | Msa0599520:intron | 40.0% |
| TCCTTCGGCTGTATATTCAT+GGG | - | chr4_2:39301936-39301955 | None:intergenic | 40.0% | |
| TTCCTTCGGCTGTATATTCA+TGG | - | chr4_2:39301937-39301956 | None:intergenic | 40.0% | |
| ACTTCAATCCTGGATTCCTT+CGG | - | chr4_2:39301951-39301970 | None:intergenic | 40.0% | |
| TAACCTGCGAATAATTGCTG+CGG | - | chr4_2:39302133-39302152 | None:intergenic | 40.0% | |
| TGAGGGTAAAAACGAGAATG+TGG | + | chr4_2:39302244-39302263 | Msa0599520:CDS | 40.0% | |
| CTAGTTAAACCATGTCCACA+TGG | - | chr4_2:39302307-39302326 | None:intergenic | 40.0% | |
| !!! | TTTTTGTTTTGGGGGTTCAG+AGG | + | chr4_2:39302344-39302363 | Msa0599520:three_prime_UTR | 40.0% |
| CTTGTCTAGTTGTCTTTGCA+TGG | + | chr4_2:39302454-39302473 | Msa0599520:three_prime_UTR | 40.0% | |
| ! | GCGTGTTGTTGCTGAGAAAA+AGG | - | chr4_2:39295430-39295449 | None:intergenic | 45.0% |
| TTGAGAGAGCCCTACAATGT+TGG | + | chr4_2:39295733-39295752 | Msa0599520:intron | 45.0% | |
| TGAGAGAGCCCTACAATGTT+GGG | + | chr4_2:39295734-39295753 | Msa0599520:intron | 45.0% | |
| CAATGTTGGGGTGAACTTAG+TGG | + | chr4_2:39295747-39295766 | Msa0599520:intron | 45.0% | |
| ! | GAGTTCGTGGTTTCAAGTCT+TGG | + | chr4_2:39295879-39295898 | Msa0599520:intron | 45.0% |
| GTTGCGTACAATACCCCAAA+TGG | + | chr4_2:39295933-39295952 | Msa0599520:intron | 45.0% | |
| CGTACAATACCCCAAATGGT+GGG | + | chr4_2:39295937-39295956 | Msa0599520:intron | 45.0% | |
| GCCTAAGCACAAGTGAATTG+AGG | + | chr4_2:39296072-39296091 | Msa0599520:intron | 45.0% | |
| TGTCTTCTTGCAGACGTAGA+TGG | + | chr4_2:39296711-39296730 | Msa0599520:intron | 45.0% | |
| CAGTACAAACACAGACAGAC+AGG | - | chr4_2:39296776-39296795 | None:intergenic | 45.0% | |
| ACTGTGACTTCTACACAAGC+TGG | + | chr4_2:39296792-39296811 | Msa0599520:intron | 45.0% | |
| ! | CTGTTGCATTTTCAGCACTG+CGG | + | chr4_2:39297242-39297261 | Msa0599520:intron | 45.0% |
| TCGCAATGAATGCTGCCAAT+TGG | + | chr4_2:39297290-39297309 | Msa0599520:intron | 45.0% | |
| GCAGAACAAGTGTTTCCTGA+AGG | + | chr4_2:39297392-39297411 | Msa0599520:intron | 45.0% | |
| CAGGCTTACATGGATGTATC+TGG | + | chr4_2:39297423-39297442 | Msa0599520:intron | 45.0% | |
| GCCATGAAGTAACAGCCAAA+AGG | - | chr4_2:39297591-39297610 | None:intergenic | 45.0% | |
| ! | GCTGTTACTTCATGGCTACA+TGG | + | chr4_2:39297595-39297614 | Msa0599520:intron | 45.0% |
| CTTCATGGCTACATGGACAT+AGG | + | chr4_2:39297602-39297621 | Msa0599520:intron | 45.0% | |
| CAAATCACATAGCCTTCGGA+TGG | + | chr4_2:39297664-39297683 | Msa0599520:intron | 45.0% | |
| ! | ACTTTTTGCTCTTACGTGGG+AGG | + | chr4_2:39297878-39297897 | Msa0599520:intron | 45.0% |
| ATCTTGTGTCTAACCGCGAA+TGG | - | chr4_2:39298201-39298220 | None:intergenic | 45.0% | |
| TAGTCATACCATGGAGAGGA+AGG | + | chr4_2:39298267-39298286 | Msa0599520:intron | 45.0% | |
| ACTTTGAACCTTCCTCTCCA+TGG | - | chr4_2:39298278-39298297 | None:intergenic | 45.0% | |
| CCATGATCCACGACAAGTTA+GGG | - | chr4_2:39298448-39298467 | None:intergenic | 45.0% | |
| ACCATGATCCACGACAAGTT+AGG | - | chr4_2:39298449-39298468 | None:intergenic | 45.0% | |
| ATATAGTCCACTGAGGTCTC+CGG | + | chr4_2:39298623-39298642 | Msa0599520:CDS | 45.0% | |
| GGAGGAGATTAGAGAAGGAT+GGG | + | chr4_2:39298798-39298817 | Msa0599520:intron | 45.0% | |
| GAGGAGATTAGAGAAGGATG+GGG | + | chr4_2:39298799-39298818 | Msa0599520:intron | 45.0% | |
| AGGAGATTAGAGAAGGATGG+GGG | + | chr4_2:39298800-39298819 | Msa0599520:intron | 45.0% | |
| AGTTACGGGGTTTGATACCT+AGG | + | chr4_2:39299173-39299192 | Msa0599520:intron | 45.0% | |
| AAACTCCCTGAACAAGTCCT+AGG | - | chr4_2:39299193-39299212 | None:intergenic | 45.0% | |
| AACTTTGCATGCTGTCAGCA+AGG | - | chr4_2:39299431-39299450 | None:intergenic | 45.0% | |
| ATGTCTTCTGTCATTGCACC+AGG | - | chr4_2:39299560-39299579 | None:intergenic | 45.0% | |
| GGTGCAATGACAGAAGACAT+AGG | + | chr4_2:39299560-39299579 | Msa0599520:intron | 45.0% | |
| CTTCTTGAACACTCTCATCC+AGG | - | chr4_2:39300210-39300229 | None:intergenic | 45.0% | |
| !! | GGATGAGAGTGTTCAAGAAG+TGG | + | chr4_2:39300210-39300229 | Msa0599520:CDS | 45.0% |
| !! | GATCTCCGAACCTTTGAAGT+CGG | - | chr4_2:39300640-39300659 | None:intergenic | 45.0% |
| TCTTTCATCTGTGTGGGGAA+TGG | + | chr4_2:39300935-39300954 | Msa0599520:intron | 45.0% | |
| ATTTGGCTGTTGAGGGCTTA+TGG | + | chr4_2:39301025-39301044 | Msa0599520:intron | 45.0% | |
| ATGCCCAGTGGCAAGATTAA+AGG | - | chr4_2:39301472-39301491 | None:intergenic | 45.0% | |
| TTTAATCTTGCCACTGGGCA+TGG | + | chr4_2:39301471-39301490 | Msa0599520:intron | 45.0% | |
| TTTCCAATAACCATGCCCAG+TGG | - | chr4_2:39301484-39301503 | None:intergenic | 45.0% | |
| AAACAGCAAGAAGCGGAAAG+CGG | + | chr4_2:39301560-39301579 | Msa0599520:CDS | 45.0% | |
| GATTGACAAGAGTTGTGAGG+AGG | + | chr4_2:39301609-39301628 | Msa0599520:CDS | 45.0% | |
| AGTATCTAGGCACCAAGATC+TGG | + | chr4_2:39301651-39301670 | Msa0599520:CDS | 45.0% | |
| ! | GTTTTCTCAAGAGCCAGAAG+AGG | - | chr4_2:39301765-39301784 | None:intergenic | 45.0% |
| ACCCATGAATATACAGCCGA+AGG | + | chr4_2:39301932-39301951 | Msa0599520:intron | 45.0% | |
| ATATACAGCCGAAGGAATCC+AGG | + | chr4_2:39301940-39301959 | Msa0599520:intron | 45.0% | |
| TGGAATGGCATTACAGGTGA+AGG | + | chr4_2:39302073-39302092 | Msa0599520:CDS | 45.0% | |
| GGAATGGCATTACAGGTGAA+GGG | + | chr4_2:39302074-39302093 | Msa0599520:CDS | 45.0% | |
| AACCTGCGAATAATTGCTGC+GGG | - | chr4_2:39302132-39302151 | None:intergenic | 45.0% | |
| AACGAGAATGTGGATGTGGA+TGG | + | chr4_2:39302254-39302273 | Msa0599520:CDS | 45.0% | |
| ! | TGTGGATGGTCTTGATGAAG+AGG | + | chr4_2:39302268-39302287 | Msa0599520:CDS | 45.0% |
| !! | AATAAGAAAAAAAAAAAAAA+AGG | - | chr4_2:39295377-39295396 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTTG+AGG | + | chr4_2:39298045-39298064 | Msa0599520:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTTGA+GGG | + | chr4_2:39298046-39298065 | Msa0599520:intron | 5.0% |
| AACACTGGTAGAGCTACTCG+TGG | - | chr4_2:39295288-39295307 | None:intergenic | 50.0% | |
| GGAGAAGTAACGCTGAACAC+TGG | - | chr4_2:39295303-39295322 | None:intergenic | 50.0% | |
| GAGAGAGCCCTACAATGTTG+GGG | + | chr4_2:39295735-39295754 | Msa0599520:intron | 50.0% | |
| GTCATGTGACTGAGAGTTCG+TGG | + | chr4_2:39295866-39295885 | Msa0599520:intron | 50.0% | |
| GCGTACAATACCCCAAATGG+TGG | + | chr4_2:39295936-39295955 | Msa0599520:intron | 50.0% | |
| ATGAAGGGGTCCCACCATTT+GGG | - | chr4_2:39295950-39295969 | None:intergenic | 50.0% | |
| TGTACTCCTAAGGGCCTGTT+TGG | + | chr4_2:39296024-39296043 | Msa0599520:intron | 50.0% | |
| GTCAATCCAAACAGGCCCTT+AGG | - | chr4_2:39296033-39296052 | None:intergenic | 50.0% | |
| ACACAGACAGACAGGACTAG+TGG | - | chr4_2:39296768-39296787 | None:intergenic | 50.0% | |
| TCTCGAGCCGGTGAATATCT+TGG | - | chr4_2:39298161-39298180 | None:intergenic | 50.0% | |
| !! | AAGATATTCACCGGCTCGAG+AGG | + | chr4_2:39298160-39298179 | Msa0599520:CDS | 50.0% |
| ! | CCCTAACTTGTCGTGGATCA+TGG | + | chr4_2:39298445-39298464 | Msa0599520:intron | 50.0% |
| TGAGGTCTCCGGAGAAAAGA+AGG | + | chr4_2:39298634-39298653 | Msa0599520:CDS | 50.0% | |
| TTGAGAGTTTGAAAGGGGGG+AGG | + | chr4_2:39298780-39298799 | Msa0599520:intron | 50.0% | |
| GGGAGGAGATTAGAGAAGGA+TGG | + | chr4_2:39298797-39298816 | Msa0599520:intron | 50.0% | |
| GGAGATTAGAGAAGGATGGG+GGG | + | chr4_2:39298801-39298820 | Msa0599520:intron | 50.0% | |
| AGTTGCATCCCTGTTCAGAG+AGG | + | chr4_2:39299910-39299929 | Msa0599520:intron | 50.0% | |
| GATCACAGGTCCGACTTCAA+AGG | + | chr4_2:39300627-39300646 | Msa0599520:intron | 50.0% | |
| CAGGTCCGACTTCAAAGGTT+CGG | + | chr4_2:39300632-39300651 | Msa0599520:CDS | 50.0% | |
| GCGGATCTCCTTGCAGAAAA+AGG | + | chr4_2:39300780-39300799 | Msa0599520:CDS | 50.0% | |
| ! | GCATGCAGCCTTTTTCTGCA+AGG | - | chr4_2:39300791-39300810 | None:intergenic | 50.0% |
| GCATGCAGAACGAGATTCTG+TGG | + | chr4_2:39300805-39300824 | Msa0599520:CDS | 50.0% | |
| TTCATCTGTGTGGGGAATGG+AGG | + | chr4_2:39300938-39300957 | Msa0599520:intron | 50.0% | |
| CTAGAGGTCCAGAACCATAC+AGG | - | chr4_2:39301058-39301077 | None:intergenic | 50.0% | |
| TTGCCACTGGGCATGGTTAT+TGG | + | chr4_2:39301478-39301497 | Msa0599520:intron | 50.0% | |
| AATGCCCTGCATGCACGTTT+GGG | - | chr4_2:39301534-39301553 | None:intergenic | 50.0% | |
| TCTAGGCACCAAGATCTGGA+AGG | + | chr4_2:39301655-39301674 | Msa0599520:CDS | 50.0% | |
| TGCTGCGGGGAATCAAATCT+GGG | - | chr4_2:39302118-39302137 | None:intergenic | 50.0% | |
| TTGCTGCGGGGAATCAAATC+TGG | - | chr4_2:39302119-39302138 | None:intergenic | 50.0% | |
| ACCTGCGAATAATTGCTGCG+GGG | - | chr4_2:39302131-39302150 | None:intergenic | 50.0% | |
| ! | CGCAGGTTAGTTCTTCTTCG+AGG | + | chr4_2:39302144-39302163 | Msa0599520:intron | 50.0% |
| ACAACACGCTCGTCGCAACT+TGG | + | chr4_2:39295441-39295460 | Msa0599520:CDS | 55.0% | |
| TGTGCCAAAGCTCCCCCTTA+GGG | - | chr4_2:39295832-39295851 | None:intergenic | 55.0% | |
| TTGTGCCAAAGCTCCCCCTT+AGG | - | chr4_2:39295833-39295852 | None:intergenic | 55.0% | |
| ! | AAGGGGGAGCTTTGGCACAA+CGG | + | chr4_2:39295833-39295852 | Msa0599520:intron | 55.0% |
| TGAAGGGGTCCCACCATTTG+GGG | - | chr4_2:39295949-39295968 | None:intergenic | 55.0% | |
| CATGAAGGGGTCCCACCATT+TGG | - | chr4_2:39295951-39295970 | None:intergenic | 55.0% | |
| ! | CAAATGGTGGGACCCCTTCA+TGG | + | chr4_2:39295949-39295968 | Msa0599520:intron | 55.0% |
| CATACGCAGGGTCCATGAAG+GGG | - | chr4_2:39295964-39295983 | None:intergenic | 55.0% | |
| GCATACGCAGGGTCCATGAA+GGG | - | chr4_2:39295965-39295984 | None:intergenic | 55.0% | |
| CTTCATGGACCCTGCGTATG+CGG | + | chr4_2:39295964-39295983 | Msa0599520:intron | 55.0% | |
| TTCATGGACCCTGCGTATGC+GGG | + | chr4_2:39295965-39295984 | Msa0599520:intron | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr4_2:39295976-39295995 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr4_2:39295977-39295996 | None:intergenic | 55.0% | |
| ! | TGCGGGAGCTTTAGTACACC+TGG | + | chr4_2:39295982-39296001 | Msa0599520:intron | 55.0% |
| ! | GGGAGCTTTAGTACACCTGG+AGG | + | chr4_2:39295985-39296004 | Msa0599520:intron | 55.0% |
| CGAGCCGGTGAATATCTTGG+AGG | - | chr4_2:39298158-39298177 | None:intergenic | 55.0% | |
| ! | CTTTTCTCCGGAGACCTCAG+TGG | - | chr4_2:39298633-39298652 | None:intergenic | 55.0% |
| AGGGGGGAGGAGATTAGAGA+AGG | + | chr4_2:39298793-39298812 | Msa0599520:intron | 55.0% | |
| TGGCAGAGACACATCGACAC+GGG | - | chr4_2:39298994-39299013 | None:intergenic | 55.0% | |
| CTGGCAGAGACACATCGACA+CGG | - | chr4_2:39298995-39299014 | None:intergenic | 55.0% | |
| AAGGACATGGGACACGACAC+TGG | - | chr4_2:39299014-39299033 | None:intergenic | 55.0% | |
| GTCTCCCAAACGTGCATGCA+GGG | + | chr4_2:39301527-39301546 | Msa0599520:intron | 55.0% | |
| GAATGCCCTGCATGCACGTT+TGG | - | chr4_2:39301535-39301554 | None:intergenic | 55.0% | |
| TGTGAGGAGGCCCCTGATAA+TGG | + | chr4_2:39301622-39301641 | Msa0599520:CDS | 55.0% | |
| GGTTGACGGCACTTCAATCC+TGG | - | chr4_2:39301961-39301980 | None:intergenic | 55.0% | |
| !! | TGAAGTGCCGTCAACCAGCA+TGG | + | chr4_2:39301965-39301984 | Msa0599520:CDS | 55.0% |
| ! | TGAGCTGCCATGCTGGTTGA+CGG | - | chr4_2:39301975-39301994 | None:intergenic | 55.0% |
| GACAACATGAGCTGCCATGC+TGG | - | chr4_2:39301982-39302001 | None:intergenic | 55.0% | |
| GGCAGCTCATGTTGTCGATG+AGG | + | chr4_2:39301986-39302005 | Msa0599520:CDS | 55.0% | |
| GCTGCGGGGAATCAAATCTG+GGG | - | chr4_2:39302117-39302136 | None:intergenic | 55.0% | |
| TCCCCGCAGCAATTATTCGC+AGG | + | chr4_2:39302127-39302146 | Msa0599520:CDS | 55.0% | |
| GTACCCCTAAGGGGGAGCTT+TGG | + | chr4_2:39295825-39295844 | Msa0599520:intron | 60.0% | |
| GTGCCAAAGCTCCCCCTTAG+GGG | - | chr4_2:39295831-39295850 | None:intergenic | 60.0% | |
| CGCATACGCAGGGTCCATGA+AGG | - | chr4_2:39295966-39295985 | None:intergenic | 60.0% | |
| AGAGGTCGGCAGACCATTCG+CGG | + | chr4_2:39298185-39298204 | Msa0599520:CDS | 60.0% | |
| CGTCTCCCAAACGTGCATGC+AGG | + | chr4_2:39301526-39301545 | Msa0599520:intron | 60.0% | |
| CAGAAGAGGCAGAGCTGCCA+TGG | - | chr4_2:39301751-39301770 | None:intergenic | 60.0% | |
| CATGGCAGCTCTGCCTCTTC+TGG | + | chr4_2:39301749-39301768 | Msa0599520:intron | 60.0% | |
| AGCAGCAGCCCATGTGGACA+TGG | + | chr4_2:39302295-39302314 | Msa0599520:CDS | 60.0% | |
| !! | TCACCGGCTCGAGAGGCAAG+AGG | + | chr4_2:39298167-39298186 | Msa0599520:CDS | 65.0% |
| CGACCTCTTGCCTCTCGAGC+CGG | - | chr4_2:39298173-39298192 | None:intergenic | 65.0% | |
| CGGCTCGAGAGGCAAGAGGT+CGG | + | chr4_2:39298171-39298190 | Msa0599520:CDS | 65.0% | |
| GGCAGCAGCAGCAGCCCATG+TGG | + | chr4_2:39302289-39302308 | Msa0599520:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 39295279 | 39302630 | 39295279 | ID=Msa0599520;Name=Msa0599520 |
| chr4_2 | mRNA | 39295279 | 39302630 | 39295279 | ID=Msa0599520-mRNA-1;Parent=Msa0599520;Name=Msa0599520-mRNA-1;_AED=0.31;_eAED=0.31;_QI=0|0.9|1|1|1|0.90|11|308|458 |
| chr4_2 | exon | 39295279 | 39295350 | 39295279 | ID=Msa0599520-mRNA-1:exon:8588;Parent=Msa0599520-mRNA-1 |
| chr4_2 | exon | 39295439 | 39295625 | 39295439 | ID=Msa0599520-mRNA-1:exon:8589;Parent=Msa0599520-mRNA-1 |
| chr4_2 | exon | 39298093 | 39298206 | 39298093 | ID=Msa0599520-mRNA-1:exon:8590;Parent=Msa0599520-mRNA-1 |
| chr4_2 | exon | 39298622 | 39298655 | 39298622 | ID=Msa0599520-mRNA-1:exon:8591;Parent=Msa0599520-mRNA-1 |
| chr4_2 | exon | 39299573 | 39299708 | 39299573 | ID=Msa0599520-mRNA-1:exon:8592;Parent=Msa0599520-mRNA-1 |
| chr4_2 | exon | 39299810 | 39299866 | 39299810 | ID=Msa0599520-mRNA-1:exon:8593;Parent=Msa0599520-mRNA-1 |
| chr4_2 | exon | 39300202 | 39300299 | 39300202 | ID=Msa0599520-mRNA-1:exon:8594;Parent=Msa0599520-mRNA-1 |
| chr4_2 | exon | 39300628 | 39300842 | 39300628 | ID=Msa0599520-mRNA-1:exon:8595;Parent=Msa0599520-mRNA-1 |
| chr4_2 | exon | 39301548 | 39301729 | 39301548 | ID=Msa0599520-mRNA-1:exon:8596;Parent=Msa0599520-mRNA-1 |
| chr4_2 | exon | 39301948 | 39302148 | 39301948 | ID=Msa0599520-mRNA-1:exon:8597;Parent=Msa0599520-mRNA-1 |
| chr4_2 | exon | 39302242 | 39302630 | 39302242 | ID=Msa0599520-mRNA-1:exon:8598;Parent=Msa0599520-mRNA-1 |
| chr4_2 | CDS | 39295279 | 39295350 | 39295279 | ID=Msa0599520-mRNA-1:cds;Parent=Msa0599520-mRNA-1 |
| chr4_2 | CDS | 39295439 | 39295625 | 39295439 | ID=Msa0599520-mRNA-1:cds;Parent=Msa0599520-mRNA-1 |
| chr4_2 | CDS | 39298093 | 39298206 | 39298093 | ID=Msa0599520-mRNA-1:cds;Parent=Msa0599520-mRNA-1 |
| chr4_2 | CDS | 39298622 | 39298655 | 39298622 | ID=Msa0599520-mRNA-1:cds;Parent=Msa0599520-mRNA-1 |
| chr4_2 | CDS | 39299573 | 39299708 | 39299573 | ID=Msa0599520-mRNA-1:cds;Parent=Msa0599520-mRNA-1 |
| chr4_2 | CDS | 39299810 | 39299866 | 39299810 | ID=Msa0599520-mRNA-1:cds;Parent=Msa0599520-mRNA-1 |
| chr4_2 | CDS | 39300202 | 39300299 | 39300202 | ID=Msa0599520-mRNA-1:cds;Parent=Msa0599520-mRNA-1 |
| chr4_2 | CDS | 39300628 | 39300842 | 39300628 | ID=Msa0599520-mRNA-1:cds;Parent=Msa0599520-mRNA-1 |
| chr4_2 | CDS | 39301548 | 39301729 | 39301548 | ID=Msa0599520-mRNA-1:cds;Parent=Msa0599520-mRNA-1 |
| chr4_2 | CDS | 39301948 | 39302148 | 39301948 | ID=Msa0599520-mRNA-1:cds;Parent=Msa0599520-mRNA-1 |
| chr4_2 | CDS | 39302242 | 39302322 | 39302242 | ID=Msa0599520-mRNA-1:cds;Parent=Msa0599520-mRNA-1 |
| chr4_2 | three_prime_UTR | 39302323 | 39302630 | 39302323 | ID=Msa0599520-mRNA-1:three_prime_utr;Parent=Msa0599520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
