Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170410 | AES89414.1 | 92.529 | 174 | 4 | 1 | 2 | 166 | 777 | 950 | 1.25e-97 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170410 | sp|P36428|SYA_ARATH | 64.943 | 174 | 51 | 2 | 3 | 166 | 830 | 1003 | 6.62e-52 | 180 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170410 | G7JNH3 | 92.529 | 174 | 4 | 1 | 2 | 166 | 777 | 950 | 5.99e-98 | 312 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001240 | Msa1170410 | 0.800321 | 1.522726e-48 | -8.615850e-47 |
| Msa0004860 | Msa1170410 | 0.811378 | 7.214552e-51 | -8.615850e-47 |
| Msa0004920 | Msa1170410 | 0.832266 | 1.042765e-55 | -8.615850e-47 |
| Msa0009430 | Msa1170410 | 0.833001 | 6.853024e-56 | -8.615850e-47 |
| Msa0011170 | Msa1170410 | 0.804590 | 2.007897e-49 | -8.615850e-47 |
| Msa0015610 | Msa1170410 | 0.812705 | 3.706417e-51 | -8.615850e-47 |
| Msa0020930 | Msa1170410 | 0.853966 | 1.684529e-61 | -8.615850e-47 |
| Msa0031340 | Msa1170410 | 0.838499 | 2.774047e-57 | -8.615850e-47 |
| Msa0031710 | Msa1170410 | 0.809221 | 2.106631e-50 | -8.615850e-47 |
| Msa0032110 | Msa1170410 | 0.803005 | 4.284069e-49 | -8.615850e-47 |
| Msa0036670 | Msa1170410 | 0.812525 | 4.058325e-51 | -8.615850e-47 |
| Msa0040450 | Msa1170410 | 0.801389 | 9.215587e-49 | -8.615850e-47 |
| Msa0043980 | Msa1170410 | 0.810109 | 1.357145e-50 | -8.615850e-47 |
| Msa0051770 | Msa1170410 | 0.818413 | 1.985403e-52 | -8.615850e-47 |
| Msa0054730 | Msa1170410 | -0.806797 | 6.909418e-50 | -8.615850e-47 |
| Msa0068680 | Msa1170410 | 0.844505 | 7.253020e-59 | -8.615850e-47 |
| Msa0074700 | Msa1170410 | 0.838868 | 2.227218e-57 | -8.615850e-47 |
| Msa0083280 | Msa1170410 | 0.817207 | 3.716050e-52 | -8.615850e-47 |
| Msa0084380 | Msa1170410 | 0.805681 | 1.186760e-49 | -8.615850e-47 |
| Msa0090360 | Msa1170410 | 0.835755 | 1.394618e-56 | -8.615850e-47 |
| Msa0101700 | Msa1170410 | 0.800258 | 1.568336e-48 | -8.615850e-47 |
| Msa0109690 | Msa1170410 | 0.807294 | 5.421895e-50 | -8.615850e-47 |
| Msa0114060 | Msa1170410 | 0.865287 | 6.587042e-65 | -8.615850e-47 |
| Msa0119960 | Msa1170410 | 0.825417 | 4.740462e-54 | -8.615850e-47 |
| Msa0606720 | Msa1170410 | 0.804824 | 1.794070e-49 | -8.615850e-47 |
| Msa0607050 | Msa1170410 | 0.841801 | 3.811288e-58 | -8.615850e-47 |
| Msa0608710 | Msa1170410 | 0.803045 | 4.204423e-49 | -8.615850e-47 |
| Msa0610430 | Msa1170410 | 0.833778 | 4.385719e-56 | -8.615850e-47 |
| Msa0612960 | Msa1170410 | 0.808158 | 3.552942e-50 | -8.615850e-47 |
| Msa0623790 | Msa1170410 | 0.830623 | 2.646549e-55 | -8.615850e-47 |
| Msa0626090 | Msa1170410 | 0.807094 | 5.978283e-50 | -8.615850e-47 |
| Msa0627450 | Msa1170410 | 0.821348 | 4.235127e-53 | -8.615850e-47 |
| Msa0643180 | Msa1170410 | 0.805986 | 1.024316e-49 | -8.615850e-47 |
| Msa0643560 | Msa1170410 | 0.813958 | 1.966445e-51 | -8.615850e-47 |
| Msa0647500 | Msa1170410 | 0.828546 | 8.468054e-55 | -8.615850e-47 |
| Msa0649490 | Msa1170410 | 0.812966 | 3.248695e-51 | -8.615850e-47 |
| Msa0661190 | Msa1170410 | -0.830725 | 2.497832e-55 | -8.615850e-47 |
| Msa0662500 | Msa1170410 | 0.806408 | 8.346080e-50 | -8.615850e-47 |
| Msa0663240 | Msa1170410 | 0.808637 | 2.808658e-50 | -8.615850e-47 |
| Msa0663390 | Msa1170410 | 0.806473 | 8.086791e-50 | -8.615850e-47 |
| Msa0667050 | Msa1170410 | 0.801559 | 8.505408e-49 | -8.615850e-47 |
| Msa0682840 | Msa1170410 | 0.820100 | 8.196529e-53 | -8.615850e-47 |
| Msa0688480 | Msa1170410 | 0.827429 | 1.572057e-54 | -8.615850e-47 |
| Msa0690150 | Msa1170410 | 0.832634 | 8.451179e-56 | -8.615850e-47 |
| Msa0709400 | Msa1170410 | 0.844941 | 5.534708e-59 | -8.615850e-47 |
| Msa0737470 | Msa1170410 | 0.840503 | 8.363303e-58 | -8.615850e-47 |
| Msa0740510 | Msa1170410 | 0.809319 | 2.006859e-50 | -8.615850e-47 |
| Msa0742380 | Msa1170410 | 0.810754 | 9.849404e-51 | -8.615850e-47 |
| Msa0744000 | Msa1170410 | 0.825869 | 3.705213e-54 | -8.615850e-47 |
| Msa0747060 | Msa1170410 | 0.803851 | 2.861874e-49 | -8.615850e-47 |
| Msa0788850 | Msa1170410 | 0.806756 | 7.046485e-50 | -8.615850e-47 |
| Msa0793810 | Msa1170410 | 0.802706 | 4.939595e-49 | -8.615850e-47 |
| Msa0794670 | Msa1170410 | 0.804165 | 2.462593e-49 | -8.615850e-47 |
| Msa0796700 | Msa1170410 | 0.806787 | 6.941823e-50 | -8.615850e-47 |
| Msa0802010 | Msa1170410 | 0.809362 | 1.964277e-50 | -8.615850e-47 |
| Msa0803890 | Msa1170410 | 0.806044 | 9.956419e-50 | -8.615850e-47 |
| Msa0806790 | Msa1170410 | 0.806988 | 6.294550e-50 | -8.615850e-47 |
| Msa0808270 | Msa1170410 | 0.820328 | 7.268553e-53 | -8.615850e-47 |
| Msa0816590 | Msa1170410 | 0.807185 | 5.719604e-50 | -8.615850e-47 |
| Msa0820770 | Msa1170410 | 0.817212 | 3.707473e-52 | -8.615850e-47 |
| Msa0824960 | Msa1170410 | 0.809724 | 1.642766e-50 | -8.615850e-47 |
| Msa0825080 | Msa1170410 | 0.807969 | 3.897692e-50 | -8.615850e-47 |
| Msa0840820 | Msa1170410 | 0.808887 | 2.483189e-50 | -8.615850e-47 |
| Msa0127650 | Msa1170410 | 0.809481 | 1.852662e-50 | -8.615850e-47 |
| Msa0137840 | Msa1170410 | 0.818794 | 1.627204e-52 | -8.615850e-47 |
| Msa0150300 | Msa1170410 | 0.800663 | 1.296626e-48 | -8.615850e-47 |
| Msa0159930 | Msa1170410 | 0.863196 | 2.957837e-64 | -8.615850e-47 |
| Msa0160550 | Msa1170410 | 0.802066 | 6.691338e-49 | -8.615850e-47 |
| Msa0168720 | Msa1170410 | 0.807254 | 5.528672e-50 | -8.615850e-47 |
| Msa0170570 | Msa1170410 | 0.807557 | 4.768510e-50 | -8.615850e-47 |
| Msa0183050 | Msa1170410 | 0.828825 | 7.249510e-55 | -8.615850e-47 |
| Msa0184040 | Msa1170410 | 0.824932 | 6.174774e-54 | -8.615850e-47 |
| Msa0184780 | Msa1170410 | 0.827612 | 1.420663e-54 | -8.615850e-47 |
| Msa0189320 | Msa1170410 | 0.844400 | 7.738083e-59 | -8.615850e-47 |
| Msa0191050 | Msa1170410 | 0.844779 | 6.117543e-59 | -8.615850e-47 |
| Msa0194950 | Msa1170410 | -0.808185 | 3.507146e-50 | -8.615850e-47 |
| Msa0205130 | Msa1170410 | 0.820588 | 6.335416e-53 | -8.615850e-47 |
| Msa0216240 | Msa1170410 | 0.808842 | 2.539160e-50 | -8.615850e-47 |
| Msa0220580 | Msa1170410 | 0.849447 | 3.214898e-60 | -8.615850e-47 |
| Msa0229990 | Msa1170410 | 0.841316 | 5.116482e-58 | -8.615850e-47 |
| Msa0233350 | Msa1170410 | 0.832975 | 6.956238e-56 | -8.615850e-47 |
| Msa0366240 | Msa1170410 | 0.811087 | 8.341630e-51 | -8.615850e-47 |
| Msa0373930 | Msa1170410 | 0.820071 | 8.322646e-53 | -8.615850e-47 |
| Msa0399340 | Msa1170410 | 0.806781 | 6.963819e-50 | -8.615850e-47 |
| Msa0408400 | Msa1170410 | 0.806935 | 6.458826e-50 | -8.615850e-47 |
| Msa0411190 | Msa1170410 | 0.810735 | 9.942513e-51 | -8.615850e-47 |
| Msa0417270 | Msa1170410 | 0.812638 | 3.833180e-51 | -8.615850e-47 |
| Msa0424790 | Msa1170410 | 0.806309 | 8.755750e-50 | -8.615850e-47 |
| Msa0433640 | Msa1170410 | 0.817215 | 3.702250e-52 | -8.615850e-47 |
| Msa0436050 | Msa1170410 | 0.800192 | 1.617205e-48 | -8.615850e-47 |
| Msa0436490 | Msa1170410 | -0.801269 | 9.750672e-49 | -8.615850e-47 |
| Msa0436760 | Msa1170410 | 0.817037 | 4.057891e-52 | -8.615850e-47 |
| Msa0439200 | Msa1170410 | 0.819984 | 8.714237e-53 | -8.615850e-47 |
| Msa0440750 | Msa1170410 | 0.818482 | 1.915500e-52 | -8.615850e-47 |
| Msa0455040 | Msa1170410 | 0.806737 | 7.112249e-50 | -8.615850e-47 |
| Msa0470690 | Msa1170410 | 0.813923 | 2.001936e-51 | -8.615850e-47 |
| Msa0475550 | Msa1170410 | 0.809484 | 1.849633e-50 | -8.615850e-47 |
| Msa0477080 | Msa1170410 | 0.852471 | 4.517466e-61 | -8.615850e-47 |
| Msa0479970 | Msa1170410 | 0.864868 | 8.920561e-65 | -8.615850e-47 |
| Msa0481530 | Msa1170410 | 0.801328 | 9.482365e-49 | -8.615850e-47 |
| Msa0993290 | Msa1170410 | 0.815087 | 1.106175e-51 | -8.615850e-47 |
| Msa0993600 | Msa1170410 | 0.814019 | 1.906259e-51 | -8.615850e-47 |
| Msa1012320 | Msa1170410 | 0.823033 | 1.722235e-53 | -8.615850e-47 |
| Msa1017630 | Msa1170410 | 0.835884 | 1.294173e-56 | -8.615850e-47 |
| Msa1018100 | Msa1170410 | 0.807973 | 3.890483e-50 | -8.615850e-47 |
| Msa1035480 | Msa1170410 | 0.825574 | 4.352294e-54 | -8.615850e-47 |
| Msa1040400 | Msa1170410 | 0.801533 | 8.609633e-49 | -8.615850e-47 |
| Msa1041730 | Msa1170410 | 0.816429 | 5.555378e-52 | -8.615850e-47 |
| Msa1046020 | Msa1170410 | 0.805137 | 1.543581e-49 | -8.615850e-47 |
| Msa1046060 | Msa1170410 | 0.801704 | 7.943074e-49 | -8.615850e-47 |
| Msa1048280 | Msa1170410 | -0.803078 | 4.139376e-49 | -8.615850e-47 |
| Msa1081820 | Msa1170410 | 0.801002 | 1.105715e-48 | -8.615850e-47 |
| Msa1081980 | Msa1170410 | 0.818579 | 1.821043e-52 | -8.615850e-47 |
| Msa1082500 | Msa1170410 | 0.814492 | 1.498870e-51 | -8.615850e-47 |
| Msa1083300 | Msa1170410 | 0.814923 | 1.203177e-51 | -8.615850e-47 |
| Msa1085200 | Msa1170410 | 0.802881 | 4.545117e-49 | -8.615850e-47 |
| Msa0241390 | Msa1170410 | 0.813268 | 2.789400e-51 | -8.615850e-47 |
| Msa0243100 | Msa1170410 | 0.800884 | 1.168729e-48 | -8.615850e-47 |
| Msa0243710 | Msa1170410 | 0.812578 | 3.951677e-51 | -8.615850e-47 |
| Msa0244810 | Msa1170410 | 0.813489 | 2.493848e-51 | -8.615850e-47 |
| Msa0250950 | Msa1170410 | 0.802136 | 6.473042e-49 | -8.615850e-47 |
| Msa0260680 | Msa1170410 | 0.831077 | 2.047985e-55 | -8.615850e-47 |
| Msa0261930 | Msa1170410 | 0.832199 | 1.083409e-55 | -8.615850e-47 |
| Msa0264150 | Msa1170410 | 0.802848 | 4.618094e-49 | -8.615850e-47 |
| Msa0271510 | Msa1170410 | 0.808775 | 2.623572e-50 | -8.615850e-47 |
| Msa0280090 | Msa1170410 | 0.860163 | 2.501236e-63 | -8.615850e-47 |
| Msa0287650 | Msa1170410 | 0.806266 | 8.943052e-50 | -8.615850e-47 |
| Msa0309770 | Msa1170410 | 0.848280 | 6.779930e-60 | -8.615850e-47 |
| Msa0312650 | Msa1170410 | 0.816071 | 6.680674e-52 | -8.615850e-47 |
| Msa0315440 | Msa1170410 | -0.800813 | 1.208457e-48 | -8.615850e-47 |
| Msa0333030 | Msa1170410 | 0.821562 | 3.779826e-53 | -8.615850e-47 |
| Msa0333720 | Msa1170410 | -0.806350 | 8.586178e-50 | -8.615850e-47 |
| Msa0334550 | Msa1170410 | 0.838757 | 2.379172e-57 | -8.615850e-47 |
| Msa0336420 | Msa1170410 | 0.824666 | 7.134655e-54 | -8.615850e-47 |
| Msa0341050 | Msa1170410 | 0.817450 | 3.277892e-52 | -8.615850e-47 |
| Msa0345970 | Msa1170410 | 0.815924 | 7.204160e-52 | -8.615850e-47 |
| Msa1121440 | Msa1170410 | 0.831201 | 1.909222e-55 | -8.615850e-47 |
| Msa1124960 | Msa1170410 | 0.841540 | 4.466219e-58 | -8.615850e-47 |
| Msa1125080 | Msa1170410 | 0.810051 | 1.396715e-50 | -8.615850e-47 |
| Msa1125760 | Msa1170410 | 0.805479 | 1.308622e-49 | -8.615850e-47 |
| Msa1131220 | Msa1170410 | 0.818483 | 1.914373e-52 | -8.615850e-47 |
| Msa1145250 | Msa1170410 | -0.801853 | 7.399850e-49 | -8.615850e-47 |
| Msa1147280 | Msa1170410 | 0.836459 | 9.243646e-57 | -8.615850e-47 |
| Msa1147970 | Msa1170410 | 0.827283 | 1.704474e-54 | -8.615850e-47 |
| Msa1154280 | Msa1170410 | 0.801363 | 9.326274e-49 | -8.615850e-47 |
| Msa1157930 | Msa1170410 | -0.803571 | 3.271041e-49 | -8.615850e-47 |
| Msa1159840 | Msa1170410 | 0.820153 | 7.971082e-53 | -8.615850e-47 |
| Msa1165920 | Msa1170410 | 0.828065 | 1.105683e-54 | -8.615850e-47 |
| Msa1167220 | Msa1170410 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa1170410 | Msa1194030 | 0.801108 | 1.051721e-48 | -8.615850e-47 |
| Msa1170410 | Msa1201430 | -0.802220 | 6.221253e-49 | -8.615850e-47 |
| Msa1170410 | Msa1204530 | 0.825759 | 3.933860e-54 | -8.615850e-47 |
| Msa1170410 | Msa1214890 | 0.811097 | 8.302981e-51 | -8.615850e-47 |
| Msa1170410 | Msa1228590 | 0.815700 | 8.083730e-52 | -8.615850e-47 |
| Msa1170410 | Msa1233910 | 0.828194 | 1.029637e-54 | -8.615850e-47 |
| Msa1170410 | Msa1244600 | 0.846783 | 1.748257e-59 | -8.615850e-47 |
| Msa1170410 | Msa1246510 | 0.812947 | 3.279762e-51 | -8.615850e-47 |
| Msa1170410 | Msa1247250 | 0.845291 | 4.450549e-59 | -8.615850e-47 |
| Msa1170410 | Msa1253020 | 0.813163 | 2.941912e-51 | -8.615850e-47 |
| Msa1170410 | Msa1255330 | 0.820181 | 7.855448e-53 | -8.615850e-47 |
| Msa1170410 | Msa1267430 | 0.841579 | 4.361640e-58 | -8.615850e-47 |
| Msa1170410 | Msa1288420 | 0.816424 | 5.569820e-52 | -8.615850e-47 |
| Msa1170410 | Msa1294120 | 0.841854 | 3.690404e-58 | -8.615850e-47 |
| Msa1170410 | Msa1296760 | 0.827128 | 1.856023e-54 | -8.615850e-47 |
| Msa1170410 | Msa1305340 | 0.813368 | 2.652054e-51 | -8.615850e-47 |
| Msa1170410 | Msa1305660 | 0.811778 | 5.905400e-51 | -8.615850e-47 |
| Msa1170410 | Msa1306840 | 0.823235 | 1.544852e-53 | -8.615850e-47 |
| Msa1170410 | Msa1331320 | 0.801295 | 9.629875e-49 | -8.615850e-47 |
| Msa1170410 | Msa1331910 | 0.800003 | 1.766753e-48 | -8.615850e-47 |
| Msa1170410 | Msa1335540 | 0.813152 | 2.957857e-51 | -8.615850e-47 |
| Msa1170410 | Msa1353980 | 0.812801 | 3.531840e-51 | -8.615850e-47 |
| Msa1170410 | Msa1356140 | 0.803719 | 3.048308e-49 | -8.615850e-47 |
| Msa1170410 | Msa1357530 | 0.800026 | 1.748109e-48 | -8.615850e-47 |
| Msa1170410 | Msa1359040 | 0.829686 | 4.481193e-55 | -8.615850e-47 |
| Msa1170410 | Msa1361100 | 0.802472 | 5.520212e-49 | -8.615850e-47 |
| Msa1170410 | Msa1373030 | 0.803495 | 3.392308e-49 | -8.615850e-47 |
| Msa1170410 | Msa1374470 | 0.817322 | 3.501844e-52 | -8.615850e-47 |
| Msa1170410 | Msa1377500 | 0.805961 | 1.036760e-49 | -8.615850e-47 |
| Msa1170410 | Msa1382540 | 0.825100 | 5.633386e-54 | -8.615850e-47 |
| Msa1170410 | Msa1391410 | 0.800770 | 1.233025e-48 | -8.615850e-47 |
| Msa1170410 | Msa1400870 | -0.802182 | 6.333630e-49 | -8.615850e-47 |
| Msa1170410 | Msa1411020 | 0.823030 | 1.724879e-53 | -8.615850e-47 |
| Msa1170410 | Msa1420490 | 0.801638 | 8.192646e-49 | -8.615850e-47 |
| Msa1170410 | Msa1423390 | 0.805151 | 1.533310e-49 | -8.615850e-47 |
| Msa1170410 | Msa1424290 | 0.818812 | 1.612268e-52 | -8.615850e-47 |
| Msa1170410 | Msa1424450 | 0.810998 | 8.723564e-51 | -8.615850e-47 |
| Msa1170410 | Msa1424750 | 0.804058 | 2.591694e-49 | -8.615850e-47 |
| Msa1170410 | Msa1426030 | 0.950925 | 5.988354e-109 | -8.615850e-47 |
| Msa1170410 | Msa1427230 | 0.804706 | 1.898900e-49 | -8.615850e-47 |
| Msa1170410 | Msa1432420 | 0.817091 | 3.946526e-52 | -8.615850e-47 |
| Msa1170410 | Msa1433390 | 0.833239 | 5.977935e-56 | -8.615850e-47 |
| Msa1170410 | Msa1434350 | 0.822345 | 2.489880e-53 | -8.615850e-47 |
| Msa1170410 | Msa1435890 | 0.824589 | 7.436737e-54 | -8.615850e-47 |
| Msa1170410 | Msa1439320 | 0.819823 | 9.484457e-53 | -8.615850e-47 |
| Msa1170410 | Msa1440370 | 0.802711 | 4.927782e-49 | -8.615850e-47 |
| Msa1170410 | Msa1440810 | 0.807345 | 5.290326e-50 | -8.615850e-47 |
| Msa1170410 | Msa1449820 | 0.803946 | 2.734412e-49 | -8.615850e-47 |
| Msa1170410 | Msa1451560 | 0.823513 | 1.330065e-53 | -8.615850e-47 |
| Msa1170410 | Msa1452240 | 0.826329 | 2.880369e-54 | -8.615850e-47 |
| Msa1170410 | Msa1453780 | -0.836776 | 7.676191e-57 | -8.615850e-47 |
| Msa1170410 | Msa1457240 | 0.807269 | 5.488978e-50 | -8.615850e-47 |
| Msa1170410 | Msa1457440 | 0.804259 | 2.353867e-49 | -8.615850e-47 |
| Msa1170410 | Msa1460050 | 0.827637 | 1.401523e-54 | -8.615850e-47 |
| Msa1170410 | Msa1460830 | 0.808241 | 3.411302e-50 | -8.615850e-47 |
| Msa1170410 | Msa1461280 | 0.809950 | 1.468440e-50 | -8.615850e-47 |
| Msa0484720 | Msa1170410 | 0.831240 | 1.867014e-55 | -8.615850e-47 |
| Msa0484780 | Msa1170410 | 0.803286 | 3.747820e-49 | -8.615850e-47 |
| Msa0493630 | Msa1170410 | 0.838483 | 2.799070e-57 | -8.615850e-47 |
| Msa0501460 | Msa1170410 | 0.802685 | 4.990102e-49 | -8.615850e-47 |
| Msa0502880 | Msa1170410 | 0.829229 | 5.784284e-55 | -8.615850e-47 |
| Msa0507680 | Msa1170410 | 0.813944 | 1.980295e-51 | -8.615850e-47 |
| Msa0516320 | Msa1170410 | 0.804443 | 2.155129e-49 | -8.615850e-47 |
| Msa0521430 | Msa1170410 | 0.806029 | 1.003291e-49 | -8.615850e-47 |
| Msa0521500 | Msa1170410 | 0.824876 | 6.364798e-54 | -8.615850e-47 |
| Msa0521540 | Msa1170410 | 0.816216 | 6.200231e-52 | -8.615850e-47 |
| Msa0548240 | Msa1170410 | 0.831800 | 1.359656e-55 | -8.615850e-47 |
| Msa0563840 | Msa1170410 | 0.823039 | 1.716800e-53 | -8.615850e-47 |
| Msa0566310 | Msa1170410 | 0.804921 | 1.712278e-49 | -8.615850e-47 |
| Msa0577500 | Msa1170410 | 0.826192 | 3.103877e-54 | -8.615850e-47 |
| Msa0599520 | Msa1170410 | 0.808138 | 3.588656e-50 | -8.615850e-47 |
| Msa0602390 | Msa1170410 | 0.808690 | 2.736514e-50 | -8.615850e-47 |
| Msa0602460 | Msa1170410 | 0.806704 | 7.228983e-50 | -8.615850e-47 |
| Msa0861090 | Msa1170410 | 0.810654 | 1.035272e-50 | -8.615850e-47 |
| Msa0864300 | Msa1170410 | 0.817832 | 2.687325e-52 | -8.615850e-47 |
| Msa0866950 | Msa1170410 | 0.826148 | 3.179591e-54 | -8.615850e-47 |
| Msa0871270 | Msa1170410 | 0.806511 | 7.939603e-50 | -8.615850e-47 |
| Msa0876200 | Msa1170410 | 0.808092 | 3.669448e-50 | -8.615850e-47 |
| Msa0880020 | Msa1170410 | 0.821706 | 3.500572e-53 | -8.615850e-47 |
| Msa0884410 | Msa1170410 | -0.811574 | 6.540724e-51 | -8.615850e-47 |
| Msa0895120 | Msa1170410 | 0.817444 | 3.286584e-52 | -8.615850e-47 |
| Msa0933230 | Msa1170410 | 0.811845 | 5.711094e-51 | -8.615850e-47 |
| Msa0935670 | Msa1170410 | 0.805805 | 1.118135e-49 | -8.615850e-47 |
| Msa0938220 | Msa1170410 | 0.805986 | 1.024384e-49 | -8.615850e-47 |
| Msa0945970 | Msa1170410 | 0.850967 | 1.205818e-60 | -8.615850e-47 |
| Msa0947660 | Msa1170410 | 0.817402 | 3.359675e-52 | -8.615850e-47 |
| Msa0966400 | Msa1170410 | 0.801169 | 1.022047e-48 | -8.615850e-47 |
| Msa0968590 | Msa1170410 | 0.819940 | 8.917277e-53 | -8.615850e-47 |
| Msa0968680 | Msa1170410 | 0.822536 | 2.247967e-53 | -8.615850e-47 |
| Msa0971090 | Msa1170410 | 0.805925 | 1.054743e-49 | -8.615850e-47 |
| Msa0978250 | Msa1170410 | 0.807393 | 5.168085e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170410 | MtrunA17_Chr4g0038011 | 92.529 | 174 | 4 | 1 | 2 | 166 | 816 | 989 | 1.97e-101 | 312 |
| Msa1170410 | MtrunA17_Chr4g0038031 | 84.302 | 172 | 18 | 1 | 3 | 165 | 463 | 634 | 4.57e-81 | 251 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170410 | AT1G50200.1 | 64.943 | 174 | 51 | 2 | 3 | 166 | 830 | 1003 | 6.73e-53 | 180 |
| Msa1170410 | AT1G50200.2 | 62.088 | 182 | 51 | 3 | 3 | 166 | 830 | 1011 | 2.03e-50 | 173 |
Find 53 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCAGATTAATAAATTAAT+TGG | 0.176205 | 7_4:-63584764 | None:intergenic |
| CATTACAGAGTGTGCTTTGA+TGG | 0.251134 | 7_4:+63584835 | Msa1170410:three_prime_UTR |
| TTCCAATTAATTTATTAATC+TGG | 0.264222 | 7_4:+63584762 | Msa1170410:three_prime_UTR |
| CCCCTTCTGAGTGATTTATA+CGG | 0.322501 | 7_4:-63584729 | None:intergenic |
| ATTGGATTGATTGATTTAGA+AGG | 0.330529 | 7_4:+63584909 | Msa1170410:three_prime_UTR |
| GACCAAGATTGCCCTACTTC+AGG | 0.355901 | 7_4:+63583141 | Msa1170410:CDS |
| TGTTCAAGTGTAATAGCAAT+TGG | 0.373317 | 7_4:+63584891 | Msa1170410:three_prime_UTR |
| AGAATGGCTGAGTAATGCTT+TGG | 0.394510 | 7_4:+63583762 | Msa1170410:CDS |
| GAATGGCTGAGTAATGCTTT+GGG | 0.404215 | 7_4:+63583763 | Msa1170410:CDS |
| TGCATATCTCACGTTAATGT+TGG | 0.411098 | 7_4:+63583412 | Msa1170410:CDS |
| TACCTGAAGTAGGGCAATCT+TGG | 0.411861 | 7_4:-63583143 | None:intergenic |
| ATTTCAGCTTTCTTAGCTGC+AGG | 0.437519 | 7_4:-63583115 | None:intergenic |
| TACTCTCTAGTTCAATTTCA+CGG | 0.450028 | 7_4:-63584691 | None:intergenic |
| CATCATATAATACCTGAAGT+AGG | 0.455474 | 7_4:-63583153 | None:intergenic |
| GTGCCGGAGAAAGGAGATAA+AGG | 0.472153 | 7_4:+63583724 | Msa1170410:CDS |
| GGAAAAGGAGGTCTTGCAAC+GGG | 0.472528 | 7_4:+63583811 | Msa1170410:CDS |
| GGGAGATGTGGTAAAGGAAA+AGG | 0.476017 | 7_4:+63583796 | Msa1170410:CDS |
| GCATATCTCACGTTAATGTT+GGG | 0.483698 | 7_4:+63583413 | Msa1170410:CDS |
| ATGCTTTGGGGCCACTGAAA+GGG | 0.487479 | 7_4:+63583776 | Msa1170410:CDS |
| TGTAGTGTGTGCTGGGGTGC+CGG | 0.494475 | 7_4:+63583708 | Msa1170410:CDS |
| TTACCTTTATCTCCTTTCTC+CGG | 0.495540 | 7_4:-63583727 | None:intergenic |
| TTGGATTGATTGATTTAGAA+GGG | 0.498975 | 7_4:+63584910 | Msa1170410:three_prime_UTR |
| ATTGATTGATTTAGAAGGGA+AGG | 0.509018 | 7_4:+63584914 | Msa1170410:three_prime_UTR |
| TGTGCTGGGGTGCCGGAGAA+AGG | 0.514670 | 7_4:+63583715 | Msa1170410:CDS |
| AACAAAGCTGTAGTGTGTGC+TGG | 0.518252 | 7_4:+63583700 | Msa1170410:CDS |
| AGGAGGTCTTGCAACGGGAC+AGG | 0.521507 | 7_4:+63583816 | Msa1170410:CDS |
| CAGAGTGTGCTTTGATGGCA+AGG | 0.522222 | 7_4:+63584840 | Msa1170410:three_prime_UTR |
| TTCCGTATAAATCACTCAGA+AGG | 0.523355 | 7_4:+63584727 | Msa1170410:three_prime_UTR |
| TCCGTATAAATCACTCAGAA+GGG | 0.526568 | 7_4:+63584728 | Msa1170410:three_prime_UTR |
| GAAAGGAGATAAAGGTAAGC+TGG | 0.527245 | 7_4:+63583732 | Msa1170410:CDS |
| TACAAAAGTCATTGATCAGA+AGG | 0.530377 | 7_4:+63583465 | Msa1170410:CDS |
| AATGCTTTGGGGCCACTGAA+AGG | 0.530573 | 7_4:+63583775 | Msa1170410:CDS |
| ATCATATAATACCTGAAGTA+GGG | 0.532869 | 7_4:-63583152 | None:intergenic |
| GCTGATCTAGCTGTTTCAGA+TGG | 0.536347 | 7_4:+63583379 | Msa1170410:CDS |
| ACAAAGCTGTAGTGTGTGCT+GGG | 0.548423 | 7_4:+63583701 | Msa1170410:CDS |
| TTACCACATCTCCCTTTCAG+TGG | 0.549551 | 7_4:-63583787 | None:intergenic |
| CTGATCTAGCTGTTTCAGAT+GGG | 0.557727 | 7_4:+63583380 | Msa1170410:CDS |
| CTGAAAGGGAGATGTGGTAA+AGG | 0.558294 | 7_4:+63583790 | Msa1170410:CDS |
| CTCACACGTAAATGAGGCTA+TGG | 0.583114 | 7_4:+63584647 | Msa1170410:CDS |
| AGATGCCTCACACGTAAATG+AGG | 0.584387 | 7_4:+63584641 | Msa1170410:CDS |
| AGATGTGGTAAAGGAAAAGG+AGG | 0.595385 | 7_4:+63583799 | Msa1170410:CDS |
| CGATGTTGCAGCAGTTCGTG+AGG | 0.602573 | 7_4:+63583438 | Msa1170410:CDS |
| TTCATCTTTGAAAAGCAATG+TGG | 0.602709 | 7_4:+63583078 | Msa1170410:CDS |
| AATGGCTGAGTAATGCTTTG+GGG | 0.604194 | 7_4:+63583764 | Msa1170410:CDS |
| TAAACAGGGATTGTCAGTGA+TGG | 0.616674 | 7_4:+63583654 | Msa1170410:intron |
| CGTATAAATCACTCAGAAGG+GGG | 0.617456 | 7_4:+63584730 | Msa1170410:three_prime_UTR |
| CATAGCCTCATTTACGTGTG+AGG | 0.628945 | 7_4:-63584646 | None:intergenic |
| CCGTATAAATCACTCAGAAG+GGG | 0.629565 | 7_4:+63584729 | Msa1170410:three_prime_UTR |
| GTAAGCTGGATGTATCAGAA+TGG | 0.647412 | 7_4:+63583746 | Msa1170410:CDS |
| GGGCCACTGAAAGGGAGATG+TGG | 0.655092 | 7_4:+63583784 | Msa1170410:CDS |
| AGGAAAAGGAGGTCTTGCAA+CGG | 0.669184 | 7_4:+63583810 | Msa1170410:CDS |
| GTATAAATCACTCAGAAGGG+GGG | 0.703292 | 7_4:+63584731 | Msa1170410:three_prime_UTR |
| CAAAGCTGTAGTGTGTGCTG+GGG | 0.725318 | 7_4:+63583702 | Msa1170410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAATATCATAATTCTTGT+AGG | + | chr7_4:63583280-63583299 | Msa1170410:intron | 15.0% |
| !! | AATGACATAATATATGAAAT+GGG | - | chr7_4:63583853-63583872 | None:intergenic | 15.0% |
| !! | TAATGACATAATATATGAAA+TGG | - | chr7_4:63583854-63583873 | None:intergenic | 15.0% |
| !! | ATTTCATATATTATGTCATT+AGG | + | chr7_4:63583853-63583872 | Msa1170410:intron | 15.0% |
| !! | ACACAAAAATATAATTACAT+AGG | + | chr7_4:63584014-63584033 | Msa1170410:intron | 15.0% |
| !!! | TTTATGAACGTTTTTTATAT+AGG | + | chr7_4:63584069-63584088 | Msa1170410:intron | 15.0% |
| !!! | TTTTATATTGAAAGAGAAAA+AGG | + | chr7_4:63584251-63584270 | Msa1170410:intron | 15.0% |
| !! | TTTATATTGAAAGAGAAAAA+GGG | + | chr7_4:63584252-63584271 | Msa1170410:intron | 15.0% |
| !!! | TTATAGTTTTGAATTTCTTA+TGG | + | chr7_4:63584456-63584475 | Msa1170410:intron | 15.0% |
| !! | TTCCAATTAATTTATTAATC+TGG | + | chr7_4:63584762-63584781 | Msa1170410:three_prime_UTR | 15.0% |
| !! | ATCCAGATTAATAAATTAAT+TGG | - | chr7_4:63584767-63584786 | None:intergenic | 15.0% |
| !!! | TGTTTAATACATGAATTTTT+AGG | + | chr7_4:63584805-63584824 | Msa1170410:three_prime_UTR | 15.0% |
| !!! | GTTTAATACATGAATTTTTA+GGG | + | chr7_4:63584806-63584825 | Msa1170410:three_prime_UTR | 15.0% |
| !! | TTTAATATCATAATTCTTGT+AGG | + | chr7_4:63583280-63583299 | Msa1170410:intron | 15.0% |
| !! | AATGACATAATATATGAAAT+GGG | - | chr7_4:63583853-63583872 | None:intergenic | 15.0% |
| !! | TAATGACATAATATATGAAA+TGG | - | chr7_4:63583854-63583873 | None:intergenic | 15.0% |
| !! | ATTTCATATATTATGTCATT+AGG | + | chr7_4:63583853-63583872 | Msa1170410:intron | 15.0% |
| !! | ACACAAAAATATAATTACAT+AGG | + | chr7_4:63584014-63584033 | Msa1170410:intron | 15.0% |
| !!! | TTTATGAACGTTTTTTATAT+AGG | + | chr7_4:63584069-63584088 | Msa1170410:intron | 15.0% |
| !!! | TTTTATATTGAAAGAGAAAA+AGG | + | chr7_4:63584251-63584270 | Msa1170410:intron | 15.0% |
| !! | TTTATATTGAAAGAGAAAAA+GGG | + | chr7_4:63584252-63584271 | Msa1170410:intron | 15.0% |
| !!! | TTATAGTTTTGAATTTCTTA+TGG | + | chr7_4:63584456-63584475 | Msa1170410:intron | 15.0% |
| !! | TTCCAATTAATTTATTAATC+TGG | + | chr7_4:63584762-63584781 | Msa1170410:three_prime_UTR | 15.0% |
| !! | ATCCAGATTAATAAATTAAT+TGG | - | chr7_4:63584767-63584786 | None:intergenic | 15.0% |
| !!! | TGTTTAATACATGAATTTTT+AGG | + | chr7_4:63584805-63584824 | Msa1170410:three_prime_UTR | 15.0% |
| !!! | GTTTAATACATGAATTTTTA+GGG | + | chr7_4:63584806-63584825 | Msa1170410:three_prime_UTR | 15.0% |
| !! | GAATTATGATATTAAACTCT+AGG | - | chr7_4:63583276-63583295 | None:intergenic | 20.0% |
| !! | ATGACATAATATATGAAATG+GGG | - | chr7_4:63583852-63583871 | None:intergenic | 20.0% |
| !! | AAATGACATGATATATGAAA+TGG | - | chr7_4:63583902-63583921 | None:intergenic | 20.0% |
| !!! | TTCATATATCATGTCATTTA+AGG | + | chr7_4:63583903-63583922 | Msa1170410:intron | 20.0% |
| !! | AAAAAACGTTCATAAAAACA+AGG | - | chr7_4:63584065-63584084 | None:intergenic | 20.0% |
| !! | AGAATGATAAAAAGTTGTTT+AGG | - | chr7_4:63584097-63584116 | None:intergenic | 20.0% |
| !!! | ATGGTTTTCAAAATTTTGAA+TGG | + | chr7_4:63584162-63584181 | Msa1170410:intron | 20.0% |
| !! | GAATTATGATATTAAACTCT+AGG | - | chr7_4:63583276-63583295 | None:intergenic | 20.0% |
| !! | ATGACATAATATATGAAATG+GGG | - | chr7_4:63583852-63583871 | None:intergenic | 20.0% |
| !! | AAATGACATGATATATGAAA+TGG | - | chr7_4:63583902-63583921 | None:intergenic | 20.0% |
| !!! | TTCATATATCATGTCATTTA+AGG | + | chr7_4:63583903-63583922 | Msa1170410:intron | 20.0% |
| !! | AAAAAACGTTCATAAAAACA+AGG | - | chr7_4:63584065-63584084 | None:intergenic | 20.0% |
| !! | AGAATGATAAAAAGTTGTTT+AGG | - | chr7_4:63584097-63584116 | None:intergenic | 20.0% |
| !!! | ATGGTTTTCAAAATTTTGAA+TGG | + | chr7_4:63584162-63584181 | Msa1170410:intron | 20.0% |
| ! | ATCATATAATACCTGAAGTA+GGG | - | chr7_4:63583155-63583174 | None:intergenic | 25.0% |
| !! | ACAACTTTTTATCATTCTCT+TGG | + | chr7_4:63584099-63584118 | Msa1170410:intron | 25.0% |
| ! | TTTATCATTCTCTTGGATAT+AGG | + | chr7_4:63584106-63584125 | Msa1170410:intron | 25.0% |
| ! | TATTTGAAAATTGAGCTACT+AGG | - | chr7_4:63584316-63584335 | None:intergenic | 25.0% |
| !! | GACAATCACTTAAATTTTCA+TGG | + | chr7_4:63584345-63584364 | Msa1170410:intron | 25.0% |
| ! | ATTATCACGTACTAATATGT+TGG | + | chr7_4:63584518-63584537 | Msa1170410:intron | 25.0% |
| !! | AATATGTTGGCTATTTATGA+AGG | + | chr7_4:63584531-63584550 | Msa1170410:intron | 25.0% |
| !! | ATATGTTGGCTATTTATGAA+GGG | + | chr7_4:63584532-63584551 | Msa1170410:intron | 25.0% |
| !! | ATTGGATTGATTGATTTAGA+AGG | + | chr7_4:63584909-63584928 | Msa1170410:three_prime_UTR | 25.0% |
| !! | TTGGATTGATTGATTTAGAA+GGG | + | chr7_4:63584910-63584929 | Msa1170410:three_prime_UTR | 25.0% |
| ! | ATCATATAATACCTGAAGTA+GGG | - | chr7_4:63583155-63583174 | None:intergenic | 25.0% |
| !! | ACAACTTTTTATCATTCTCT+TGG | + | chr7_4:63584099-63584118 | Msa1170410:intron | 25.0% |
| ! | TTTATCATTCTCTTGGATAT+AGG | + | chr7_4:63584106-63584125 | Msa1170410:intron | 25.0% |
| ! | TATTTGAAAATTGAGCTACT+AGG | - | chr7_4:63584316-63584335 | None:intergenic | 25.0% |
| !! | GACAATCACTTAAATTTTCA+TGG | + | chr7_4:63584345-63584364 | Msa1170410:intron | 25.0% |
| ! | ATTATCACGTACTAATATGT+TGG | + | chr7_4:63584518-63584537 | Msa1170410:intron | 25.0% |
| !! | AATATGTTGGCTATTTATGA+AGG | + | chr7_4:63584531-63584550 | Msa1170410:intron | 25.0% |
| !! | ATATGTTGGCTATTTATGAA+GGG | + | chr7_4:63584532-63584551 | Msa1170410:intron | 25.0% |
| !! | ATTGGATTGATTGATTTAGA+AGG | + | chr7_4:63584909-63584928 | Msa1170410:three_prime_UTR | 25.0% |
| !! | TTGGATTGATTGATTTAGAA+GGG | + | chr7_4:63584910-63584929 | Msa1170410:three_prime_UTR | 25.0% |
| GAAACTTTCTGTGACAAAAA+GGG | - | chr7_4:63583061-63583080 | None:intergenic | 30.0% | |
| TGAAACTTTCTGTGACAAAA+AGG | - | chr7_4:63583062-63583081 | None:intergenic | 30.0% | |
| ! | TTCATCTTTGAAAAGCAATG+TGG | + | chr7_4:63583078-63583097 | Msa1170410:CDS | 30.0% |
| CATCATATAATACCTGAAGT+AGG | - | chr7_4:63583156-63583175 | None:intergenic | 30.0% | |
| TACAAAAGTCATTGATCAGA+AGG | + | chr7_4:63583465-63583484 | Msa1170410:CDS | 30.0% | |
| GACAGAAAATATAATTGCCA+AGG | - | chr7_4:63583599-63583618 | None:intergenic | 30.0% | |
| TGTCAACATCAAACATTAAC+TGG | + | chr7_4:63583615-63583634 | Msa1170410:intron | 30.0% | |
| TTGATCATAATACCCTTGTT+TGG | + | chr7_4:63583987-63584006 | Msa1170410:intron | 30.0% | |
| AAACCATTAAACACAATCCA+TGG | - | chr7_4:63584149-63584168 | None:intergenic | 30.0% | |
| AAGAGTTATCTAAGTTTGTG+TGG | + | chr7_4:63584280-63584299 | Msa1170410:intron | 30.0% | |
| !!! | GATCTACTTTGAAATGCTTT+TGG | + | chr7_4:63584406-63584425 | Msa1170410:intron | 30.0% |
| ! | TACTCTCTAGTTCAATTTCA+CGG | - | chr7_4:63584694-63584713 | None:intergenic | 30.0% |
| TGTTCAAGTGTAATAGCAAT+TGG | + | chr7_4:63584891-63584910 | Msa1170410:three_prime_UTR | 30.0% | |
| ! | ATTGATTGATTTAGAAGGGA+AGG | + | chr7_4:63584914-63584933 | Msa1170410:three_prime_UTR | 30.0% |
| GAAACTTTCTGTGACAAAAA+GGG | - | chr7_4:63583061-63583080 | None:intergenic | 30.0% | |
| TGAAACTTTCTGTGACAAAA+AGG | - | chr7_4:63583062-63583081 | None:intergenic | 30.0% | |
| ! | TTCATCTTTGAAAAGCAATG+TGG | + | chr7_4:63583078-63583097 | Msa1170410:CDS | 30.0% |
| CATCATATAATACCTGAAGT+AGG | - | chr7_4:63583156-63583175 | None:intergenic | 30.0% | |
| TACAAAAGTCATTGATCAGA+AGG | + | chr7_4:63583465-63583484 | Msa1170410:CDS | 30.0% | |
| GACAGAAAATATAATTGCCA+AGG | - | chr7_4:63583599-63583618 | None:intergenic | 30.0% | |
| TGTCAACATCAAACATTAAC+TGG | + | chr7_4:63583615-63583634 | Msa1170410:intron | 30.0% | |
| TTGATCATAATACCCTTGTT+TGG | + | chr7_4:63583987-63584006 | Msa1170410:intron | 30.0% | |
| AAACCATTAAACACAATCCA+TGG | - | chr7_4:63584149-63584168 | None:intergenic | 30.0% | |
| AAGAGTTATCTAAGTTTGTG+TGG | + | chr7_4:63584280-63584299 | Msa1170410:intron | 30.0% | |
| !!! | GATCTACTTTGAAATGCTTT+TGG | + | chr7_4:63584406-63584425 | Msa1170410:intron | 30.0% |
| ! | TACTCTCTAGTTCAATTTCA+CGG | - | chr7_4:63584694-63584713 | None:intergenic | 30.0% |
| TGTTCAAGTGTAATAGCAAT+TGG | + | chr7_4:63584891-63584910 | Msa1170410:three_prime_UTR | 30.0% | |
| ! | ATTGATTGATTTAGAAGGGA+AGG | + | chr7_4:63584914-63584933 | Msa1170410:three_prime_UTR | 30.0% |
| TAAGGAAATCAGTGTCAATC+AGG | - | chr7_4:63582983-63583002 | None:intergenic | 35.0% | |
| AGCATTATCTCTATCTGCTA+AGG | - | chr7_4:63583001-63583020 | None:intergenic | 35.0% | |
| CAATAAGTAACAGACAAACG+TGG | - | chr7_4:63583217-63583236 | None:intergenic | 35.0% | |
| TGCATATCTCACGTTAATGT+TGG | + | chr7_4:63583412-63583431 | Msa1170410:CDS | 35.0% | |
| GCATATCTCACGTTAATGTT+GGG | + | chr7_4:63583413-63583432 | Msa1170410:CDS | 35.0% | |
| CAACTCAACACATAATAACG+AGG | - | chr7_4:63583542-63583561 | None:intergenic | 35.0% | |
| ! | AGCAATGTTTGCTGATAAAC+AGG | + | chr7_4:63583639-63583658 | Msa1170410:intron | 35.0% |
| ! | GCAATGTTTGCTGATAAACA+GGG | + | chr7_4:63583640-63583659 | Msa1170410:intron | 35.0% |
| TTACCTTTATCTCCTTTCTC+CGG | - | chr7_4:63583730-63583749 | None:intergenic | 35.0% | |
| ! | TTTTGTGTTCGTCCAAACAA+GGG | - | chr7_4:63584002-63584021 | None:intergenic | 35.0% |
| ! | TTTTTGTGTTCGTCCAAACA+AGG | - | chr7_4:63584003-63584022 | None:intergenic | 35.0% |
| CGTTCATAAAAACAAGGACT+CGG | - | chr7_4:63584059-63584078 | None:intergenic | 35.0% | |
| ! | TTGAAATGCTTTTGGCCAAA+AGG | + | chr7_4:63584414-63584433 | Msa1170410:intron | 35.0% |
| GCTTCAGTCATAAACATCTT+AGG | + | chr7_4:63584478-63584497 | Msa1170410:intron | 35.0% | |
| !!! | TTTGCACCATCCTTTTTTTC+AGG | + | chr7_4:63584614-63584633 | Msa1170410:intron | 35.0% |
| !!! | TTGCACCATCCTTTTTTTCA+GGG | + | chr7_4:63584615-63584634 | Msa1170410:intron | 35.0% |
| TTCCGTATAAATCACTCAGA+AGG | + | chr7_4:63584727-63584746 | Msa1170410:three_prime_UTR | 35.0% | |
| TCCGTATAAATCACTCAGAA+GGG | + | chr7_4:63584728-63584747 | Msa1170410:three_prime_UTR | 35.0% | |
| TAAGGAAATCAGTGTCAATC+AGG | - | chr7_4:63582983-63583002 | None:intergenic | 35.0% | |
| AGCATTATCTCTATCTGCTA+AGG | - | chr7_4:63583001-63583020 | None:intergenic | 35.0% | |
| CAATAAGTAACAGACAAACG+TGG | - | chr7_4:63583217-63583236 | None:intergenic | 35.0% | |
| TGCATATCTCACGTTAATGT+TGG | + | chr7_4:63583412-63583431 | Msa1170410:CDS | 35.0% | |
| GCATATCTCACGTTAATGTT+GGG | + | chr7_4:63583413-63583432 | Msa1170410:CDS | 35.0% | |
| CAACTCAACACATAATAACG+AGG | - | chr7_4:63583542-63583561 | None:intergenic | 35.0% | |
| ! | AGCAATGTTTGCTGATAAAC+AGG | + | chr7_4:63583639-63583658 | Msa1170410:intron | 35.0% |
| ! | GCAATGTTTGCTGATAAACA+GGG | + | chr7_4:63583640-63583659 | Msa1170410:intron | 35.0% |
| TTACCTTTATCTCCTTTCTC+CGG | - | chr7_4:63583730-63583749 | None:intergenic | 35.0% | |
| ! | TTTTGTGTTCGTCCAAACAA+GGG | - | chr7_4:63584002-63584021 | None:intergenic | 35.0% |
| ! | TTTTTGTGTTCGTCCAAACA+AGG | - | chr7_4:63584003-63584022 | None:intergenic | 35.0% |
| CGTTCATAAAAACAAGGACT+CGG | - | chr7_4:63584059-63584078 | None:intergenic | 35.0% | |
| ! | TTGAAATGCTTTTGGCCAAA+AGG | + | chr7_4:63584414-63584433 | Msa1170410:intron | 35.0% |
| GCTTCAGTCATAAACATCTT+AGG | + | chr7_4:63584478-63584497 | Msa1170410:intron | 35.0% | |
| !!! | TTTGCACCATCCTTTTTTTC+AGG | + | chr7_4:63584614-63584633 | Msa1170410:intron | 35.0% |
| !!! | TTGCACCATCCTTTTTTTCA+GGG | + | chr7_4:63584615-63584634 | Msa1170410:intron | 35.0% |
| TTCCGTATAAATCACTCAGA+AGG | + | chr7_4:63584727-63584746 | Msa1170410:three_prime_UTR | 35.0% | |
| TCCGTATAAATCACTCAGAA+GGG | + | chr7_4:63584728-63584747 | Msa1170410:three_prime_UTR | 35.0% | |
| AAGTATCCCAATAAGTTCCC+TGG | + | chr7_4:63582889-63582908 | Msa1170410:intron | 40.0% | |
| TATCAAGTCATTCTCCACCA+GGG | - | chr7_4:63582909-63582928 | None:intergenic | 40.0% | |
| CAATCAGGCAGAGAAAGATA+TGG | - | chr7_4:63582968-63582987 | None:intergenic | 40.0% | |
| ATTTCAGCTTTCTTAGCTGC+AGG | - | chr7_4:63583118-63583137 | None:intergenic | 40.0% | |
| TAACAGACAAACGTGGAACA+GGG | - | chr7_4:63583210-63583229 | None:intergenic | 40.0% | |
| TGTAACGTTAACAGCTGAGA+AGG | + | chr7_4:63583357-63583376 | Msa1170410:intron | 40.0% | |
| ! | CTGATCTAGCTGTTTCAGAT+GGG | + | chr7_4:63583380-63583399 | Msa1170410:CDS | 40.0% |
| AAGGACACATGACAAAGTCA+AGG | - | chr7_4:63583580-63583599 | None:intergenic | 40.0% | |
| TTGACTTTGTCATGTGTCCT+TGG | + | chr7_4:63583579-63583598 | Msa1170410:intron | 40.0% | |
| TAAACAGGGATTGTCAGTGA+TGG | + | chr7_4:63583654-63583673 | Msa1170410:intron | 40.0% | |
| GAAAGGAGATAAAGGTAAGC+TGG | + | chr7_4:63583732-63583751 | Msa1170410:CDS | 40.0% | |
| GTAAGCTGGATGTATCAGAA+TGG | + | chr7_4:63583746-63583765 | Msa1170410:CDS | 40.0% | |
| AGAATGGCTGAGTAATGCTT+TGG | + | chr7_4:63583762-63583781 | Msa1170410:CDS | 40.0% | |
| GAATGGCTGAGTAATGCTTT+GGG | + | chr7_4:63583763-63583782 | Msa1170410:CDS | 40.0% | |
| AATGGCTGAGTAATGCTTTG+GGG | + | chr7_4:63583764-63583783 | Msa1170410:CDS | 40.0% | |
| AGATGTGGTAAAGGAAAAGG+AGG | + | chr7_4:63583799-63583818 | Msa1170410:CDS | 40.0% | |
| CCATTAAACACAATCCATGG+TGG | - | chr7_4:63584146-63584165 | None:intergenic | 40.0% | |
| ! | CCACCATGGATTGTGTTTAA+TGG | + | chr7_4:63584143-63584162 | Msa1170410:intron | 40.0% |
| CTGTACCCTGAAAAAAAGGA+TGG | - | chr7_4:63584623-63584642 | None:intergenic | 40.0% | |
| GCATCTGTACCCTGAAAAAA+AGG | - | chr7_4:63584627-63584646 | None:intergenic | 40.0% | |
| CCCCTTCTGAGTGATTTATA+CGG | - | chr7_4:63584732-63584751 | None:intergenic | 40.0% | |
| CCGTATAAATCACTCAGAAG+GGG | + | chr7_4:63584729-63584748 | Msa1170410:three_prime_UTR | 40.0% | |
| CGTATAAATCACTCAGAAGG+GGG | + | chr7_4:63584730-63584749 | Msa1170410:three_prime_UTR | 40.0% | |
| GTATAAATCACTCAGAAGGG+GGG | + | chr7_4:63584731-63584750 | Msa1170410:three_prime_UTR | 40.0% | |
| CATTACAGAGTGTGCTTTGA+TGG | + | chr7_4:63584835-63584854 | Msa1170410:three_prime_UTR | 40.0% | |
| AAGTATCCCAATAAGTTCCC+TGG | + | chr7_4:63582889-63582908 | Msa1170410:intron | 40.0% | |
| TATCAAGTCATTCTCCACCA+GGG | - | chr7_4:63582909-63582928 | None:intergenic | 40.0% | |
| CAATCAGGCAGAGAAAGATA+TGG | - | chr7_4:63582968-63582987 | None:intergenic | 40.0% | |
| ATTTCAGCTTTCTTAGCTGC+AGG | - | chr7_4:63583118-63583137 | None:intergenic | 40.0% | |
| TAACAGACAAACGTGGAACA+GGG | - | chr7_4:63583210-63583229 | None:intergenic | 40.0% | |
| TGTAACGTTAACAGCTGAGA+AGG | + | chr7_4:63583357-63583376 | Msa1170410:intron | 40.0% | |
| ! | CTGATCTAGCTGTTTCAGAT+GGG | + | chr7_4:63583380-63583399 | Msa1170410:CDS | 40.0% |
| AAGGACACATGACAAAGTCA+AGG | - | chr7_4:63583580-63583599 | None:intergenic | 40.0% | |
| TTGACTTTGTCATGTGTCCT+TGG | + | chr7_4:63583579-63583598 | Msa1170410:intron | 40.0% | |
| TAAACAGGGATTGTCAGTGA+TGG | + | chr7_4:63583654-63583673 | Msa1170410:intron | 40.0% | |
| GAAAGGAGATAAAGGTAAGC+TGG | + | chr7_4:63583732-63583751 | Msa1170410:CDS | 40.0% | |
| GTAAGCTGGATGTATCAGAA+TGG | + | chr7_4:63583746-63583765 | Msa1170410:CDS | 40.0% | |
| AGAATGGCTGAGTAATGCTT+TGG | + | chr7_4:63583762-63583781 | Msa1170410:CDS | 40.0% | |
| GAATGGCTGAGTAATGCTTT+GGG | + | chr7_4:63583763-63583782 | Msa1170410:CDS | 40.0% | |
| AATGGCTGAGTAATGCTTTG+GGG | + | chr7_4:63583764-63583783 | Msa1170410:CDS | 40.0% | |
| AGATGTGGTAAAGGAAAAGG+AGG | + | chr7_4:63583799-63583818 | Msa1170410:CDS | 40.0% | |
| CCATTAAACACAATCCATGG+TGG | - | chr7_4:63584146-63584165 | None:intergenic | 40.0% | |
| ! | CCACCATGGATTGTGTTTAA+TGG | + | chr7_4:63584143-63584162 | Msa1170410:intron | 40.0% |
| CTGTACCCTGAAAAAAAGGA+TGG | - | chr7_4:63584623-63584642 | None:intergenic | 40.0% | |
| GCATCTGTACCCTGAAAAAA+AGG | - | chr7_4:63584627-63584646 | None:intergenic | 40.0% | |
| CCCCTTCTGAGTGATTTATA+CGG | - | chr7_4:63584732-63584751 | None:intergenic | 40.0% | |
| CCGTATAAATCACTCAGAAG+GGG | + | chr7_4:63584729-63584748 | Msa1170410:three_prime_UTR | 40.0% | |
| CGTATAAATCACTCAGAAGG+GGG | + | chr7_4:63584730-63584749 | Msa1170410:three_prime_UTR | 40.0% | |
| GTATAAATCACTCAGAAGGG+GGG | + | chr7_4:63584731-63584750 | Msa1170410:three_prime_UTR | 40.0% | |
| CATTACAGAGTGTGCTTTGA+TGG | + | chr7_4:63584835-63584854 | Msa1170410:three_prime_UTR | 40.0% | |
| TATCCCAATAAGTTCCCTGG+TGG | + | chr7_4:63582892-63582911 | Msa1170410:intron | 45.0% | |
| TCTCCACCAGGGAACTTATT+GGG | - | chr7_4:63582898-63582917 | None:intergenic | 45.0% | |
| TTCTCCACCAGGGAACTTAT+TGG | - | chr7_4:63582899-63582918 | None:intergenic | 45.0% | |
| GTATCAAGTCATTCTCCACC+AGG | - | chr7_4:63582910-63582929 | None:intergenic | 45.0% | |
| TACCTGAAGTAGGGCAATCT+TGG | - | chr7_4:63583146-63583165 | None:intergenic | 45.0% | |
| AACAGACAAACGTGGAACAG+GGG | - | chr7_4:63583209-63583228 | None:intergenic | 45.0% | |
| GTAACAGACAAACGTGGAAC+AGG | - | chr7_4:63583211-63583230 | None:intergenic | 45.0% | |
| ! | GCTGATCTAGCTGTTTCAGA+TGG | + | chr7_4:63583379-63583398 | Msa1170410:CDS | 45.0% |
| AACAAAGCTGTAGTGTGTGC+TGG | + | chr7_4:63583700-63583719 | Msa1170410:CDS | 45.0% | |
| ACAAAGCTGTAGTGTGTGCT+GGG | + | chr7_4:63583701-63583720 | Msa1170410:CDS | 45.0% | |
| TTACCACATCTCCCTTTCAG+TGG | - | chr7_4:63583790-63583809 | None:intergenic | 45.0% | |
| CTGAAAGGGAGATGTGGTAA+AGG | + | chr7_4:63583790-63583809 | Msa1170410:CDS | 45.0% | |
| GGGAGATGTGGTAAAGGAAA+AGG | + | chr7_4:63583796-63583815 | Msa1170410:CDS | 45.0% | |
| AGGAAAAGGAGGTCTTGCAA+CGG | + | chr7_4:63583810-63583829 | Msa1170410:CDS | 45.0% | |
| ! | TGCTTTTGGCCAAAAGGCTT+CGG | + | chr7_4:63584420-63584439 | Msa1170410:intron | 45.0% |
| AGATGCCTCACACGTAAATG+AGG | + | chr7_4:63584641-63584660 | Msa1170410:CDS | 45.0% | |
| CATAGCCTCATTTACGTGTG+AGG | - | chr7_4:63584649-63584668 | None:intergenic | 45.0% | |
| CTCACACGTAAATGAGGCTA+TGG | + | chr7_4:63584647-63584666 | Msa1170410:CDS | 45.0% | |
| TATCCCAATAAGTTCCCTGG+TGG | + | chr7_4:63582892-63582911 | Msa1170410:intron | 45.0% | |
| TCTCCACCAGGGAACTTATT+GGG | - | chr7_4:63582898-63582917 | None:intergenic | 45.0% | |
| TTCTCCACCAGGGAACTTAT+TGG | - | chr7_4:63582899-63582918 | None:intergenic | 45.0% | |
| GTATCAAGTCATTCTCCACC+AGG | - | chr7_4:63582910-63582929 | None:intergenic | 45.0% | |
| TACCTGAAGTAGGGCAATCT+TGG | - | chr7_4:63583146-63583165 | None:intergenic | 45.0% | |
| AACAGACAAACGTGGAACAG+GGG | - | chr7_4:63583209-63583228 | None:intergenic | 45.0% | |
| GTAACAGACAAACGTGGAAC+AGG | - | chr7_4:63583211-63583230 | None:intergenic | 45.0% | |
| ! | GCTGATCTAGCTGTTTCAGA+TGG | + | chr7_4:63583379-63583398 | Msa1170410:CDS | 45.0% |
| AACAAAGCTGTAGTGTGTGC+TGG | + | chr7_4:63583700-63583719 | Msa1170410:CDS | 45.0% | |
| ACAAAGCTGTAGTGTGTGCT+GGG | + | chr7_4:63583701-63583720 | Msa1170410:CDS | 45.0% | |
| TTACCACATCTCCCTTTCAG+TGG | - | chr7_4:63583790-63583809 | None:intergenic | 45.0% | |
| CTGAAAGGGAGATGTGGTAA+AGG | + | chr7_4:63583790-63583809 | Msa1170410:CDS | 45.0% | |
| GGGAGATGTGGTAAAGGAAA+AGG | + | chr7_4:63583796-63583815 | Msa1170410:CDS | 45.0% | |
| AGGAAAAGGAGGTCTTGCAA+CGG | + | chr7_4:63583810-63583829 | Msa1170410:CDS | 45.0% | |
| ! | TGCTTTTGGCCAAAAGGCTT+CGG | + | chr7_4:63584420-63584439 | Msa1170410:intron | 45.0% |
| AGATGCCTCACACGTAAATG+AGG | + | chr7_4:63584641-63584660 | Msa1170410:CDS | 45.0% | |
| CATAGCCTCATTTACGTGTG+AGG | - | chr7_4:63584649-63584668 | None:intergenic | 45.0% | |
| CTCACACGTAAATGAGGCTA+TGG | + | chr7_4:63584647-63584666 | Msa1170410:CDS | 45.0% | |
| GACCAAGATTGCCCTACTTC+AGG | + | chr7_4:63583141-63583160 | Msa1170410:CDS | 50.0% | |
| CAAAGCTGTAGTGTGTGCTG+GGG | + | chr7_4:63583702-63583721 | Msa1170410:CDS | 50.0% | |
| GTGCCGGAGAAAGGAGATAA+AGG | + | chr7_4:63583724-63583743 | Msa1170410:CDS | 50.0% | |
| !! | AATGCTTTGGGGCCACTGAA+AGG | + | chr7_4:63583775-63583794 | Msa1170410:CDS | 50.0% |
| !! | ATGCTTTGGGGCCACTGAAA+GGG | + | chr7_4:63583776-63583795 | Msa1170410:CDS | 50.0% |
| GGAAAAGGAGGTCTTGCAAC+GGG | + | chr7_4:63583811-63583830 | Msa1170410:CDS | 50.0% | |
| AGAATCTTCCAGCTCCACCA+TGG | + | chr7_4:63584129-63584148 | Msa1170410:intron | 50.0% | |
| ! | AACACAATCCATGGTGGAGC+TGG | - | chr7_4:63584140-63584159 | None:intergenic | 50.0% |
| ! | GCTGTATCTCCGAAGCCTTT+TGG | - | chr7_4:63584432-63584451 | None:intergenic | 50.0% |
| AAATCACTCAGAAGGGGGGA+AGG | + | chr7_4:63584735-63584754 | Msa1170410:three_prime_UTR | 50.0% | |
| ! | CAGAGTGTGCTTTGATGGCA+AGG | + | chr7_4:63584840-63584859 | Msa1170410:three_prime_UTR | 50.0% |
| GACCAAGATTGCCCTACTTC+AGG | + | chr7_4:63583141-63583160 | Msa1170410:CDS | 50.0% | |
| CAAAGCTGTAGTGTGTGCTG+GGG | + | chr7_4:63583702-63583721 | Msa1170410:CDS | 50.0% | |
| GTGCCGGAGAAAGGAGATAA+AGG | + | chr7_4:63583724-63583743 | Msa1170410:CDS | 50.0% | |
| !! | AATGCTTTGGGGCCACTGAA+AGG | + | chr7_4:63583775-63583794 | Msa1170410:CDS | 50.0% |
| !! | ATGCTTTGGGGCCACTGAAA+GGG | + | chr7_4:63583776-63583795 | Msa1170410:CDS | 50.0% |
| GGAAAAGGAGGTCTTGCAAC+GGG | + | chr7_4:63583811-63583830 | Msa1170410:CDS | 50.0% | |
| AGAATCTTCCAGCTCCACCA+TGG | + | chr7_4:63584129-63584148 | Msa1170410:intron | 50.0% | |
| ! | AACACAATCCATGGTGGAGC+TGG | - | chr7_4:63584140-63584159 | None:intergenic | 50.0% |
| ! | GCTGTATCTCCGAAGCCTTT+TGG | - | chr7_4:63584432-63584451 | None:intergenic | 50.0% |
| AAATCACTCAGAAGGGGGGA+AGG | + | chr7_4:63584735-63584754 | Msa1170410:three_prime_UTR | 50.0% | |
| ! | CAGAGTGTGCTTTGATGGCA+AGG | + | chr7_4:63584840-63584859 | Msa1170410:three_prime_UTR | 50.0% |
| CGATGTTGCAGCAGTTCGTG+AGG | + | chr7_4:63583438-63583457 | Msa1170410:CDS | 55.0% | |
| CGATGTTGCAGCAGTTCGTG+AGG | + | chr7_4:63583438-63583457 | Msa1170410:CDS | 55.0% | |
| TGTAGTGTGTGCTGGGGTGC+CGG | + | chr7_4:63583708-63583727 | Msa1170410:CDS | 60.0% | |
| GGGCCACTGAAAGGGAGATG+TGG | + | chr7_4:63583784-63583803 | Msa1170410:CDS | 60.0% | |
| AGGAGGTCTTGCAACGGGAC+AGG | + | chr7_4:63583816-63583835 | Msa1170410:CDS | 60.0% | |
| TGTAGTGTGTGCTGGGGTGC+CGG | + | chr7_4:63583708-63583727 | Msa1170410:CDS | 60.0% | |
| GGGCCACTGAAAGGGAGATG+TGG | + | chr7_4:63583784-63583803 | Msa1170410:CDS | 60.0% | |
| AGGAGGTCTTGCAACGGGAC+AGG | + | chr7_4:63583816-63583835 | Msa1170410:CDS | 60.0% | |
| !! | TGTGCTGGGGTGCCGGAGAA+AGG | + | chr7_4:63583715-63583734 | Msa1170410:CDS | 65.0% |
| !! | TGTGCTGGGGTGCCGGAGAA+AGG | + | chr7_4:63583715-63583734 | Msa1170410:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 63582885 | 63585017 | 63582885 | ID=Msa1170410;Name=Msa1170410 |
| chr7_4 | mRNA | 63582885 | 63585017 | 63582885 | ID=Msa1170410-mRNA-1;Parent=Msa1170410;Name=Msa1170410-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.6|0.33|0.83|0.6|0.5|6|310|166 |
| chr7_4 | exon | 63582885 | 63582890 | 63582885 | ID=Msa1170410-mRNA-1:exon:20431;Parent=Msa1170410-mRNA-1 |
| chr7_4 | exon | 63583073 | 63583162 | 63583073 | ID=Msa1170410-mRNA-1:exon:20432;Parent=Msa1170410-mRNA-1 |
| chr7_4 | exon | 63583302 | 63583349 | 63583302 | ID=Msa1170410-mRNA-1:exon:20433;Parent=Msa1170410-mRNA-1 |
| chr7_4 | exon | 63583379 | 63583486 | 63583379 | ID=Msa1170410-mRNA-1:exon:20434;Parent=Msa1170410-mRNA-1 |
| chr7_4 | exon | 63583661 | 63583837 | 63583661 | ID=Msa1170410-mRNA-1:exon:20435;Parent=Msa1170410-mRNA-1 |
| chr7_4 | exon | 63584636 | 63585017 | 63584636 | ID=Msa1170410-mRNA-1:exon:20436;Parent=Msa1170410-mRNA-1 |
| chr7_4 | CDS | 63582885 | 63582890 | 63582885 | ID=Msa1170410-mRNA-1:cds;Parent=Msa1170410-mRNA-1 |
| chr7_4 | CDS | 63583073 | 63583162 | 63583073 | ID=Msa1170410-mRNA-1:cds;Parent=Msa1170410-mRNA-1 |
| chr7_4 | CDS | 63583302 | 63583349 | 63583302 | ID=Msa1170410-mRNA-1:cds;Parent=Msa1170410-mRNA-1 |
| chr7_4 | CDS | 63583379 | 63583486 | 63583379 | ID=Msa1170410-mRNA-1:cds;Parent=Msa1170410-mRNA-1 |
| chr7_4 | CDS | 63583661 | 63583837 | 63583661 | ID=Msa1170410-mRNA-1:cds;Parent=Msa1170410-mRNA-1 |
| chr7_4 | CDS | 63584636 | 63584707 | 63584636 | ID=Msa1170410-mRNA-1:cds;Parent=Msa1170410-mRNA-1 |
| chr7_4 | three_prime_UTR | 63584708 | 63585017 | 63584708 | ID=Msa1170410-mRNA-1:three_prime_utr;Parent=Msa1170410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
