Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633670 | XP_024638076.1 | 91.274 | 997 | 65 | 5 | 1 | 993 | 1 | 979 | 0.0 | 1787 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633670 | A0A396I3C8 | 91.274 | 997 | 65 | 5 | 1 | 993 | 1 | 979 | 0.0 | 1787 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa0633670 | 0.802783 | 4.762997e-49 | -8.615850e-47 |
| Msa0017510 | Msa0633670 | 0.803136 | 4.025912e-49 | -8.615850e-47 |
| Msa0116770 | Msa0633670 | 0.817046 | 4.040903e-52 | -8.615850e-47 |
| Msa0633400 | Msa0633670 | 0.819174 | 1.333624e-52 | -8.615850e-47 |
| Msa0633670 | Msa0638070 | 0.825921 | 3.601633e-54 | -8.615850e-47 |
| Msa0633670 | Msa0638280 | 0.824705 | 6.985281e-54 | -8.615850e-47 |
| Msa0633670 | Msa0638320 | 0.806496 | 7.996537e-50 | -8.615850e-47 |
| Msa0633670 | Msa0663240 | 0.815942 | 7.137229e-52 | -8.615850e-47 |
| Msa0633670 | Msa0663250 | 0.801958 | 7.041902e-49 | -8.615850e-47 |
| Msa0633670 | Msa0677270 | 0.804489 | 2.108366e-49 | -8.615850e-47 |
| Msa0633670 | Msa0688480 | 0.815519 | 8.868474e-52 | -8.615850e-47 |
| Msa0633670 | Msa0693380 | 0.805480 | 1.308251e-49 | -8.615850e-47 |
| Msa0633670 | Msa0850960 | 0.836031 | 1.187510e-56 | -8.615850e-47 |
| Msa0633670 | Msa1019640 | 0.820981 | 5.144959e-53 | -8.615850e-47 |
| Msa0633670 | Msa1082500 | 0.803244 | 3.824168e-49 | -8.615850e-47 |
| Msa0633670 | Msa1085200 | 0.805286 | 1.436616e-49 | -8.615850e-47 |
| Msa0633670 | Msa1104370 | 0.816145 | 6.429503e-52 | -8.615850e-47 |
| Msa0633670 | Msa1113170 | 0.802219 | 6.224767e-49 | -8.615850e-47 |
| Msa0633670 | Msa1217860 | 0.816562 | 5.187759e-52 | -8.615850e-47 |
| Msa0633670 | Msa1343070 | 0.821203 | 4.574423e-53 | -8.615850e-47 |
| Msa0633670 | Msa1388450 | 0.808082 | 3.688541e-50 | -8.615850e-47 |
| Msa0633670 | Msa1403480 | 0.820378 | 7.079427e-53 | -8.615850e-47 |
| Msa0633670 | Msa1409870 | 0.810280 | 1.246690e-50 | -8.615850e-47 |
| Msa0633670 | Msa1415640 | 0.800098 | 1.690344e-48 | -8.615850e-47 |
| Msa0633670 | Msa1423880 | 0.801871 | 7.337416e-49 | -8.615850e-47 |
| Msa0633670 | Msa1439320 | 0.801308 | 9.571633e-49 | -8.615850e-47 |
| Msa0633670 | Msa1439960 | 0.810458 | 1.140985e-50 | -8.615850e-47 |
| Msa0633670 | Msa1443060 | 0.822194 | 2.698379e-53 | -8.615850e-47 |
| Msa0157290 | Msa0633670 | 0.803318 | 3.690556e-49 | -8.615850e-47 |
| Msa0165210 | Msa0633670 | 0.829395 | 5.273670e-55 | -8.615850e-47 |
| Msa0165220 | Msa0633670 | 0.828909 | 6.918378e-55 | -8.615850e-47 |
| Msa0395790 | Msa0633670 | 0.806897 | 6.580558e-50 | -8.615850e-47 |
| Msa0410650 | Msa0633670 | 0.809288 | 2.037283e-50 | -8.615850e-47 |
| Msa0436050 | Msa0633670 | 0.804371 | 2.230312e-49 | -8.615850e-47 |
| Msa0468290 | Msa0633670 | 0.800361 | 1.494046e-48 | -8.615850e-47 |
| Msa0241640 | Msa0633670 | 0.804860 | 1.763610e-49 | -8.615850e-47 |
| Msa0244860 | Msa0633670 | 0.803777 | 2.964577e-49 | -8.615850e-47 |
| Msa0283450 | Msa0633670 | 0.809925 | 1.486957e-50 | -8.615850e-47 |
| Msa0283520 | Msa0633670 | 0.814399 | 1.571626e-51 | -8.615850e-47 |
| Msa0308550 | Msa0633670 | 0.807916 | 4.001661e-50 | -8.615850e-47 |
| Msa0332000 | Msa0633670 | 0.808522 | 2.971240e-50 | -8.615850e-47 |
| Msa0350990 | Msa0633670 | 0.813657 | 2.290947e-51 | -8.615850e-47 |
| Msa0351030 | Msa0633670 | 0.807442 | 5.044926e-50 | -8.615850e-47 |
| Msa0484780 | Msa0633670 | 0.804623 | 1.976308e-49 | -8.615850e-47 |
| Msa0507680 | Msa0633670 | 0.803257 | 3.800714e-49 | -8.615850e-47 |
| Msa0521880 | Msa0633670 | 0.822645 | 2.120339e-53 | -8.615850e-47 |
| Msa0537190 | Msa0633670 | 0.871544 | 6.305681e-67 | -8.615850e-47 |
| Msa0562440 | Msa0633670 | 0.815729 | 7.963864e-52 | -8.615850e-47 |
| Msa0593650 | Msa0633670 | 0.848350 | 6.484057e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633670 | MtrunA17_Chr4g0011741 | 91.274 | 997 | 65 | 5 | 1 | 993 | 1 | 979 | 0.0 | 1787 |
| Msa0633670 | MtrunA17_Chr6g0472201 | 50.000 | 428 | 170 | 6 | 535 | 956 | 29 | 418 | 1.32e-136 | 416 |
| Msa0633670 | MtrunA17_Chr3g0096851 | 53.846 | 260 | 96 | 3 | 535 | 789 | 29 | 269 | 1.54e-91 | 292 |
| Msa0633670 | MtrunA17_Chr7g0226581 | 69.378 | 209 | 56 | 2 | 711 | 919 | 1 | 201 | 4.96e-90 | 288 |
| Msa0633670 | MtrunA17_Chr5g0409781 | 77.519 | 129 | 29 | 0 | 623 | 751 | 47 | 175 | 2.06e-66 | 220 |
| Msa0633670 | MtrunA17_Chr2g0306531 | 41.270 | 189 | 89 | 5 | 737 | 919 | 2 | 174 | 1.11e-31 | 123 |
| Msa0633670 | MtrunA17_Chr2g0306521 | 46.316 | 95 | 50 | 1 | 574 | 667 | 236 | 330 | 2.29e-23 | 102 |
| Msa0633670 | MtrunA17_Chr7g0226591 | 39.216 | 153 | 75 | 5 | 153 | 301 | 55 | 193 | 1.78e-15 | 76.3 |
| Msa0633670 | MtrunA17_Chr7g0226591 | 47.541 | 122 | 43 | 6 | 445 | 551 | 70 | 185 | 1.37e-12 | 67.8 |
| Msa0633670 | MtrunA17_Chr2g0305311 | 24.625 | 333 | 209 | 10 | 608 | 928 | 183 | 485 | 4.57e-14 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0633670 | AT1G40087.1 | 27.037 | 270 | 171 | 9 | 609 | 856 | 73 | 338 | 1.05e-18 | 90.1 |
| Msa0633670 | AT3G30200.1 | 26.667 | 270 | 176 | 8 | 605 | 856 | 193 | 458 | 1.22e-18 | 90.9 |
Find 189 sgRNAs with CRISPR-Local
Find 537 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGCTCCCCTTCTTCATTTA+AGG | 0.093712 | 4_3:+19384657 | None:intergenic |
| AACATCCACTTTATACTTTC+TGG | 0.100460 | 4_3:+19386401 | None:intergenic |
| ACCTTATTCCTTTCTACTTT+TGG | 0.161616 | 4_3:-19382633 | Msa0633670:three_prime_UTR |
| TATCACAATGAAAGTAAATA+AGG | 0.196877 | 4_3:-19389054 | Msa0633670:exon |
| CATTGATGATTTCAGGAAAT+TGG | 0.204677 | 4_3:-19384141 | Msa0633670:intron |
| GTCCTCTTACTTACACTAAT+TGG | 0.212199 | 4_3:-19384561 | Msa0633670:CDS |
| CATATATTCTCCTTCTTCTT+TGG | 0.215996 | 4_3:+19384529 | None:intergenic |
| TAGGAAATTAATGATTTATT+GGG | 0.227619 | 4_3:-19384252 | Msa0633670:CDS |
| CCATGGCAGCGCACTCTTCC+AGG | 0.230720 | 4_3:+19383414 | None:intergenic |
| AAAACTTACAATTGTGTTAC+TGG | 0.234856 | 4_3:+19383595 | None:intergenic |
| GCCCATTATTGTGGTCATTT+GGG | 0.242734 | 4_3:+19383142 | None:intergenic |
| TTAGGAAATTAATGATTTAT+TGG | 0.243216 | 4_3:-19384253 | Msa0633670:CDS |
| CTTTCTGTTGGTTTAGCTAT+TGG | 0.244340 | 4_3:-19385126 | Msa0633670:CDS |
| TCATCTTCAAAGTCATTAAA+AGG | 0.246775 | 4_3:+19382795 | None:intergenic |
| TTTCGTGATACATAACAATT+TGG | 0.249046 | 4_3:+19382426 | None:intergenic |
| CCTTATGATAGCAAAGCTTA+TGG | 0.259101 | 4_3:+19384065 | None:intergenic |
| AGCCCATTATTGTGGTCATT+TGG | 0.275452 | 4_3:+19383141 | None:intergenic |
| TTGAAAAGAAGTAAAGAAAT+TGG | 0.277839 | 4_3:-19383369 | Msa0633670:CDS |
| AGATACATTGTTCCTGAAAA+AGG | 0.278882 | 4_3:-19384413 | Msa0633670:CDS |
| ATGTATCACGAAAGTGATTT+TGG | 0.284442 | 4_3:-19382416 | Msa0633670:three_prime_UTR |
| GGAAATTGCAAGTTCTTCTA+AGG | 0.286199 | 4_3:-19383227 | Msa0633670:CDS |
| ACCGATGTAAACATCATCTT+TGG | 0.298416 | 4_3:+19388758 | None:intergenic |
| CAAAGAAGAAGGAGAATATA+TGG | 0.298681 | 4_3:-19384528 | Msa0633670:CDS |
| TGTGAATACTTTGCTATTGT+TGG | 0.304886 | 4_3:-19382358 | Msa0633670:three_prime_UTR |
| CATGATCAACAACATCCTTT+TGG | 0.306016 | 4_3:+19387307 | None:intergenic |
| GCAAAGTTCTAGTTTAAATC+AGG | 0.322392 | 4_3:-19388445 | Msa0633670:CDS |
| ACCCCAAATGACCACAATAA+TGG | 0.333226 | 4_3:-19383144 | Msa0633670:CDS |
| TCAATGATTGTTGTTTCATT+TGG | 0.334026 | 4_3:+19388178 | None:intergenic |
| CAAAAGGATGTTGTTGATCA+TGG | 0.346918 | 4_3:-19387306 | Msa0633670:CDS |
| CAATTGTGTTACTGGTAACT+TGG | 0.347417 | 4_3:+19383603 | None:intergenic |
| CAAGATTTGATCGTAAATTC+TGG | 0.349141 | 4_3:-19383483 | Msa0633670:CDS |
| AGCGACACTGATGGAATCTT+TGG | 0.355738 | 4_3:+19387258 | None:intergenic |
| TATCTTGGTCTGAATTGCTT+TGG | 0.356836 | 4_3:+19383193 | None:intergenic |
| ATTAACTTTGAAAATGATAA+TGG | 0.359329 | 4_3:-19385452 | Msa0633670:CDS |
| CCCAAAAGTAGAAAGGAATA+AGG | 0.359529 | 4_3:+19382632 | None:intergenic |
| CCCCAAATGACCACAATAAT+GGG | 0.360164 | 4_3:-19383143 | Msa0633670:CDS |
| CAAGAGGACCTTGTTGATCA+TGG | 0.361988 | 4_3:-19385563 | Msa0633670:CDS |
| AACATACCTCATCATTATTT+AGG | 0.362058 | 4_3:+19383094 | None:intergenic |
| AATTTCCTAAAGTCAGCTTC+TGG | 0.363009 | 4_3:+19384266 | None:intergenic |
| GTAAGGGTATTACCTTTCAT+TGG | 0.371408 | 4_3:+19387108 | None:intergenic |
| ACTAACGTAAACATCATCTT+TGG | 0.382211 | 4_3:+19386638 | None:intergenic |
| CTTATGATAGCAAAGCTTAT+GGG | 0.385281 | 4_3:+19384066 | None:intergenic |
| GGAAAAGGAGGCACGCGACT+TGG | 0.386753 | 4_3:-19389032 | Msa0633670:CDS |
| ATCTGAGAATCAATTGATTA+CGG | 0.386776 | 4_3:-19391028 | Msa0633670:intron |
| GCAGAGGACTTTGTAATGTC+TGG | 0.390946 | 4_3:+19388519 | None:intergenic |
| AAGCAATTCAGACCAAGATA+TGG | 0.396175 | 4_3:-19383190 | Msa0633670:CDS |
| CGTTTGATCATGCTTGAGAA+TGG | 0.397941 | 4_3:+19388344 | None:intergenic |
| CTGTTGGTTTAGCTATTGGT+TGG | 0.401483 | 4_3:-19385122 | Msa0633670:CDS |
| CGTAAATTCTGGTCAGTCTT+CGG | 0.402447 | 4_3:-19383472 | Msa0633670:CDS |
| AGAACAACCTTTCGATTACT+TGG | 0.403083 | 4_3:-19382769 | Msa0633670:CDS |
| GAAAAGGAGGCACGCGACTT+GGG | 0.403387 | 4_3:-19389031 | Msa0633670:CDS |
| AAAATTTACCCAACTCGATA+AGG | 0.404876 | 4_3:-19382514 | Msa0633670:three_prime_UTR |
| ACATACCAGAAGCTGACTTT+AGG | 0.405399 | 4_3:-19384271 | Msa0633670:CDS |
| CCGTTGTTCATGCATGAGAA+TGG | 0.406746 | 4_3:+19386178 | None:intergenic |
| CCATAAGCTTTGCTATCATA+AGG | 0.406969 | 4_3:-19384065 | Msa0633670:CDS |
| GTCATTGGTTGGCTTTCTGT+TGG | 0.408369 | 4_3:-19385138 | Msa0633670:CDS |
| ATCACAATGAAAGTAAATAA+GGG | 0.408475 | 4_3:-19389053 | Msa0633670:exon |
| AAGTGACAAGATTCAAGAAA+TGG | 0.411534 | 4_3:-19383307 | Msa0633670:CDS |
| AACTCGATAAGGATGTTGTT+TGG | 0.422804 | 4_3:-19382503 | Msa0633670:three_prime_UTR |
| CTTCCCAGTCATGAAAAGAT+TGG | 0.424153 | 4_3:+19382730 | None:intergenic |
| CATCAGACAATTGTTCTTCA+AGG | 0.426301 | 4_3:+19382880 | None:intergenic |
| CATTTGGTCATGCTTGAGAA+TGG | 0.428826 | 4_3:+19388194 | None:intergenic |
| GGAAGATCAATCCAAGTTGC+AGG | 0.431598 | 4_3:-19388300 | Msa0633670:CDS |
| TAATCATCAAGTGACATTGA+TGG | 0.431600 | 4_3:+19385515 | None:intergenic |
| TTTATCCTGTAGGTAAATCA+TGG | 0.432016 | 4_3:-19382903 | Msa0633670:intron |
| TCAGCTTCTGGTATGTTGTC+TGG | 0.433323 | 4_3:+19384278 | None:intergenic |
| GCTATTGGTTGGCTTTCTGT+TGG | 0.437849 | 4_3:-19385111 | Msa0633670:intron |
| CCGTTGATCATGCTTGAGAA+TGG | 0.441878 | 4_3:+19386274 | None:intergenic |
| CCGATGTAAACATCATCTTT+GGG | 0.444317 | 4_3:+19388759 | None:intergenic |
| TTTCTTTACCGAAGATAGTT+CGG | 0.446641 | 4_3:+19383439 | None:intergenic |
| ACTTACAGTTCTCCACTAGA+AGG | 0.448503 | 4_3:+19386591 | None:intergenic |
| TTCCAATTAGTGTAAGTAAG+AGG | 0.461637 | 4_3:+19384559 | None:intergenic |
| GAAATCACCTTAAATGAAGA+AGG | 0.461651 | 4_3:-19384664 | Msa0633670:CDS |
| AATTATGAAAATGATGTTGA+TGG | 0.463343 | 4_3:-19387183 | Msa0633670:CDS |
| GCAGCGGTGTTACCTTCCAT+TGG | 0.466100 | 4_3:+19385371 | None:intergenic |
| CCCATTATTGTGGTCATTTG+GGG | 0.468524 | 4_3:+19383143 | None:intergenic |
| AACAACATCCTTATCGAGTT+GGG | 0.470800 | 4_3:+19382506 | None:intergenic |
| CCTCAGATCATGCATGAGAA+TGG | 0.471359 | 4_3:+19386082 | None:intergenic |
| CCTGGAAGAGTGCGCTGCCA+TGG | 0.474546 | 4_3:-19383414 | Msa0633670:CDS |
| GAAGCATTCCGAACTATCTT+CGG | 0.475610 | 4_3:-19383447 | Msa0633670:CDS |
| AGCAATTCAGACCAAGATAT+GGG | 0.476590 | 4_3:-19383189 | Msa0633670:CDS |
| ATGCTATAATAAATGATGCT+TGG | 0.483767 | 4_3:-19384376 | Msa0633670:CDS |
| CTCATCATTATTTAGGCCAT+GGG | 0.484311 | 4_3:+19383101 | None:intergenic |
| CCTCATCATTATTTAGGCCA+TGG | 0.484321 | 4_3:+19383100 | None:intergenic |
| ATGAAAGTAAATAAGGGAAA+AGG | 0.485460 | 4_3:-19389047 | Msa0633670:CDS |
| GGAGGTAAAACATGAAAAGA+TGG | 0.490515 | 4_3:-19383286 | Msa0633670:CDS |
| TTCTTCTGCTCAATTCCAAA+AGG | 0.490628 | 4_3:-19387322 | Msa0633670:CDS |
| TTCTCAGATGAATTGAAAAG+AGG | 0.492954 | 4_3:+19391042 | None:intergenic |
| ACGTTAGTTCACAACTCAAA+CGG | 0.494455 | 4_3:-19386623 | Msa0633670:CDS |
| AAATTGTTCAGTAATGTCAA+TGG | 0.499066 | 4_3:-19382329 | Msa0633670:three_prime_UTR |
| TTTGAGAAGAACCTGCAACT+TGG | 0.502572 | 4_3:+19388289 | None:intergenic |
| AAAACTTCTGCTTGAGTAGG+AGG | 0.507345 | 4_3:+19383665 | None:intergenic |
| GTAGCGGGCCGCTCTCTGCT+AGG | 0.507423 | 4_3:-19387360 | Msa0633670:CDS |
| AGGGTATTACCTTTCATTGG+AGG | 0.516913 | 4_3:+19387111 | None:intergenic |
| AAAGAAGAAGGAGAATATAT+GGG | 0.517336 | 4_3:-19384527 | Msa0633670:CDS |
| TTCTCCACTACAAGGTGGCA+TGG | 0.521633 | 4_3:+19388719 | None:intergenic |
| TTAAATTTATCTTACTTGAA+CGG | 0.522475 | 4_3:+19384220 | None:intergenic |
| GTAGGCCGGTCTCAGTTCGT+TGG | 0.524260 | 4_3:-19385611 | Msa0633670:intron |
| AAACAACATCCTTATCGAGT+TGG | 0.524415 | 4_3:+19382505 | None:intergenic |
| ACATCGGTGCACAACTCAAA+CGG | 0.524605 | 4_3:-19388743 | Msa0633670:CDS |
| TTCTAGTTTAAATCAGGGGA+TGG | 0.525203 | 4_3:-19388439 | Msa0633670:CDS |
| AAAAGAGGTCAGTGAAGAAT+CGG | 0.526045 | 4_3:+19391057 | None:intergenic |
| ATGACTACTATAGACTCTGC+TGG | 0.527721 | 4_3:-19388372 | Msa0633670:CDS |
| ATTTCTTCTCTTTCAGCAAG+TGG | 0.528393 | 4_3:+19384682 | None:intergenic |
| CTTCTGGTATGTTGTCTGGA+CGG | 0.530403 | 4_3:+19384282 | None:intergenic |
| AAAAGGAGGCACGCGACTTG+GGG | 0.532219 | 4_3:-19389030 | Msa0633670:CDS |
| CAAAGTTCTAGTTTAAATCA+GGG | 0.532231 | 4_3:-19388444 | Msa0633670:CDS |
| GAAACACGACAAAGTAAGAA+AGG | 0.532579 | 4_3:-19383638 | Msa0633670:CDS |
| AAAGAGATGGCAGCAATGGA+GGG | 0.533542 | 4_3:-19383249 | Msa0633670:CDS |
| CATAAGCTTTGCTATCATAA+GGG | 0.534866 | 4_3:-19384064 | Msa0633670:CDS |
| CTTGCTGTGAAGTGGAACAT+TGG | 0.535809 | 4_3:+19386249 | None:intergenic |
| TTTGAGCAGATCCTGCCACT+TGG | 0.536367 | 4_3:+19386027 | None:intergenic |
| TAAAAGAGAAGCTAATATCA+TGG | 0.537021 | 4_3:-19382549 | Msa0633670:three_prime_UTR |
| TTTGCGCAGATCCTGCCACT+TGG | 0.537377 | 4_3:+19388139 | None:intergenic |
| TTAATCCAACGAACTGAGAC+CGG | 0.538368 | 4_3:+19385606 | None:intergenic |
| TAAGCTACCACTTGAAGAAG+AGG | 0.538486 | 4_3:-19385480 | Msa0633670:CDS |
| GGAAGTTCAATCCAAGTGGC+AGG | 0.538723 | 4_3:-19386038 | Msa0633670:CDS |
| GGAAGTTCAATCCAAGTGGC+AGG | 0.538723 | 4_3:-19388150 | Msa0633670:CDS |
| TCTCCACTACAAGGTGGCAT+GGG | 0.539275 | 4_3:+19388720 | None:intergenic |
| AGGAAATTAATGATTTATTG+GGG | 0.540538 | 4_3:-19384251 | Msa0633670:CDS |
| AGGAGGCTCACAATCATCCT+TGG | 0.544300 | 4_3:+19383682 | None:intergenic |
| CTTGAGAATGGATCGATTAG+CGG | 0.544850 | 4_3:+19386286 | None:intergenic |
| GAAGGCTATACCAAAGAAGA+AGG | 0.545383 | 4_3:-19384539 | Msa0633670:CDS |
| AAACAACAATCATTGACAGC+TGG | 0.546198 | 4_3:-19388171 | Msa0633670:CDS |
| TAAAGAGATGGCAGCAATGG+AGG | 0.548073 | 4_3:-19383250 | Msa0633670:CDS |
| GGGTATTACCTTTCATTGGA+GGG | 0.548873 | 4_3:+19387112 | None:intergenic |
| TAGTAAAGAGATGGCAGCAA+TGG | 0.550552 | 4_3:-19383253 | Msa0633670:CDS |
| TCAGATTGACTCATCAATGC+TGG | 0.550681 | 4_3:-19382693 | Msa0633670:exon |
| TCTTACTTACACTAATTGGA+AGG | 0.551758 | 4_3:-19384557 | Msa0633670:CDS |
| TTATCAACCCAAAAGTAGAA+AGG | 0.551935 | 4_3:+19382625 | None:intergenic |
| ATATCATCCTCTTCTTCAAG+TGG | 0.552179 | 4_3:+19385473 | None:intergenic |
| AAGCAACAGTCATTGACAGC+TGG | 0.553575 | 4_3:-19386059 | Msa0633670:CDS |
| TTCTCCACTAGAAGGTAGCA+TGG | 0.555126 | 4_3:+19386599 | None:intergenic |
| ATTAACTATGAAAATGATGA+TGG | 0.556975 | 4_3:-19385413 | Msa0633670:CDS |
| AATGAAGAAGGGGAGCCCAT+TGG | 0.560442 | 4_3:-19384652 | Msa0633670:CDS |
| AATGATAATGGTGATGTTGA+GGG | 0.561118 | 4_3:-19385440 | Msa0633670:CDS |
| AAATCACCTTAAATGAAGAA+GGG | 0.563337 | 4_3:-19384663 | Msa0633670:CDS |
| AAACAACAATCATTGACAGC+TGG | 0.563591 | 4_3:-19388321 | Msa0633670:CDS |
| AAATGATCAAGCGACACTGA+TGG | 0.563909 | 4_3:+19387249 | None:intergenic |
| CGGCCCATGCCACCTTGTAG+TGG | 0.564484 | 4_3:-19388723 | Msa0633670:CDS |
| AAGAATCGGTGGAGAAAATG+TGG | 0.568430 | 4_3:+19391071 | None:intergenic |
| CGGCCCATGCTACCTTCTAG+TGG | 0.568877 | 4_3:-19386603 | Msa0633670:CDS |
| AGTATGACAACTTGCGTGAG+CGG | 0.575926 | 4_3:-19384313 | Msa0633670:CDS |
| ATATTCCAGAAAGTATAAAG+TGG | 0.583110 | 4_3:-19386406 | Msa0633670:CDS |
| CAGTTCTGCTCAATTTCAAG+AGG | 0.584026 | 4_3:-19385579 | Msa0633670:CDS |
| TCTTCTTCCAAGTAATCGAA+AGG | 0.585682 | 4_3:+19382762 | None:intergenic |
| AAATGATAATGGTGATGTTG+AGG | 0.585717 | 4_3:-19385441 | Msa0633670:CDS |
| AAAGTAAATAAGGGAAAAGG+AGG | 0.587085 | 4_3:-19389044 | Msa0633670:CDS |
| TAAGCAACAAGTTGAAGTTG+AGG | 0.589915 | 4_3:-19387217 | Msa0633670:CDS |
| GAAAACTAATGACAATCCAA+TGG | 0.593959 | 4_3:-19385387 | Msa0633670:CDS |
| CATGTTAATGTGAACAATGA+TGG | 0.596679 | 4_3:-19388960 | Msa0633670:intron |
| AATTCAGAAAACAACGATGA+GGG | 0.597970 | 4_3:-19386126 | Msa0633670:CDS |
| AAAGGAGGCACGCGACTTGG+GGG | 0.599733 | 4_3:-19389029 | Msa0633670:CDS |
| AATCACCTTAAATGAAGAAG+GGG | 0.602115 | 4_3:-19384662 | Msa0633670:CDS |
| ACTAATGACAATCCAATGGA+AGG | 0.603762 | 4_3:-19385383 | Msa0633670:intron |
| AAAGTTCTAGTTTAAATCAG+GGG | 0.604848 | 4_3:-19388443 | Msa0633670:CDS |
| ACTAACGACCCTCCAATGAA+AGG | 0.605031 | 4_3:-19387120 | Msa0633670:intron |
| TAATAAATGATGCTTGGAGA+CGG | 0.606235 | 4_3:-19384370 | Msa0633670:CDS |
| AAGGTGTTGTAACTCTTCCA+TGG | 0.608703 | 4_3:+19383397 | None:intergenic |
| ATGAATGTAGCCCATTATTG+TGG | 0.611135 | 4_3:+19383133 | None:intergenic |
| GCGGGCCGCTCTCTGCTAGG+TGG | 0.618987 | 4_3:-19387357 | Msa0633670:CDS |
| CCATTCTCATGCATGATCTG+AGG | 0.622838 | 4_3:-19386082 | Msa0633670:CDS |
| TGACTACTATAGACTCTGCT+GGG | 0.622977 | 4_3:-19388371 | Msa0633670:CDS |
| CACTGATGGAATCTTTGGAG+TGG | 0.625827 | 4_3:+19387263 | None:intergenic |
| TGAAAATGATGTTGATGGTG+AGG | 0.626159 | 4_3:-19387178 | Msa0633670:CDS |
| TGACAAGATTCAAGAAATGG+AGG | 0.626506 | 4_3:-19383304 | Msa0633670:CDS |
| CCCAAAGATGATGTTTACAT+CGG | 0.630117 | 4_3:-19388759 | Msa0633670:CDS |
| AGAGGTCAGTGAAGAATCGG+TGG | 0.631061 | 4_3:+19391060 | None:intergenic |
| GCAATTCAGACCAAGATATG+GGG | 0.632072 | 4_3:-19383188 | Msa0633670:CDS |
| CATTCATCTACATCTGCCCA+TGG | 0.633478 | 4_3:-19383117 | Msa0633670:CDS |
| ACTTACGGTTCTCCACTACA+AGG | 0.637620 | 4_3:+19388711 | None:intergenic |
| TATGCTCGAGAATTCATGAT+CGG | 0.640321 | 4_3:-19384705 | Msa0633670:CDS |
| CCATGGCCTAAATAATGATG+AGG | 0.641883 | 4_3:-19383100 | Msa0633670:intron |
| TCTCCACTAGAAGGTAGCAT+GGG | 0.646411 | 4_3:+19386600 | None:intergenic |
| AATCGGTGGAGAAAATGTGG+AGG | 0.646694 | 4_3:+19391074 | None:intergenic |
| CCATTCTCAAGCATGATCAA+CGG | 0.649729 | 4_3:-19386274 | Msa0633670:CDS |
| AGCTGGAAGTTCAATCCAAG+TGG | 0.652651 | 4_3:-19386042 | Msa0633670:CDS |
| AGCTGGAAGTTCAATCCAAG+TGG | 0.652651 | 4_3:-19388154 | Msa0633670:CDS |
| CAATTCAGACCAAGATATGG+GGG | 0.664719 | 4_3:-19383187 | Msa0633670:CDS |
| GAAAATGATGTTGATGGTGA+GGG | 0.665717 | 4_3:-19387177 | Msa0633670:CDS |
| AAATTCAGAAAACAACGATG+AGG | 0.669446 | 4_3:-19386127 | Msa0633670:CDS |
| CTATGTGTAGCGTGCAACCA+AGG | 0.673476 | 4_3:-19383699 | Msa0633670:intron |
| AAGAGATGGCAGCAATGGAG+GGG | 0.675148 | 4_3:-19383248 | Msa0633670:CDS |
| TGGAAGGTCCATGATCAACA+AGG | 0.676862 | 4_3:+19385555 | None:intergenic |
| CCATTCTCATGCATGAACAA+CGG | 0.678870 | 4_3:-19386178 | Msa0633670:CDS |
| TTAATCCACCTAGCAGAGAG+CGG | 0.688646 | 4_3:+19387352 | None:intergenic |
| TTTGGTTCTTGATAGAGACG+AGG | 0.701174 | 4_3:-19386665 | Msa0633670:intron |
| TGACTTGGAAGATGACAATG+AGG | 0.723215 | 4_3:-19382823 | Msa0633670:CDS |
| TACGGTTCTCCACTACAAGG+TGG | 0.728989 | 4_3:+19388714 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTTTTTATTTTTT+TGG | - | chr4_3:19386785-19386804 | Msa0633670:intron | 0.0% |
| !! | TTAAAAAAAGTTTAATTACA+AGG | + | chr4_3:19383615-19383634 | None:intergenic | 10.0% |
| !!! | AAAAAAAAATCAGTTTTTAT+TGG | + | chr4_3:19383921-19383940 | None:intergenic | 10.0% |
| !! | TACCAAAAAAATTAACTAAA+GGG | + | chr4_3:19383126-19383145 | None:intergenic | 15.0% |
| !! | AAATACATATATTAAATCAC+CGG | + | chr4_3:19384589-19384608 | None:intergenic | 15.0% |
| !!! | TTATACTTTTCAATTGATAA+AGG | - | chr4_3:19384914-19384933 | Msa0633670:intron | 15.0% |
| !! | ATATACAAAGATAACTAAAA+CGG | + | chr4_3:19386513-19386532 | None:intergenic | 15.0% |
| !!! | TTATACTTTTCAATTGATAA+AGG | - | chr4_3:19384914-19384933 | Msa0633670:intron | 15.0% |
| !!! | TTTTTACTTATTCTATGTTT+TGG | - | chr4_3:19387742-19387761 | Msa0633670:intron | 15.0% |
| !!! | TTTTACTTATTCTATGTTTT+GGG | - | chr4_3:19387743-19387762 | Msa0633670:intron | 15.0% |
| !!! | ATTAACTTTGAAAATGATAA+TGG | - | chr4_3:19388016-19388035 | Msa0633670:intron | 15.0% |
| !! | AAATATAGCAGAAAAAAAAA+AGG | + | chr4_3:19388539-19388558 | None:intergenic | 15.0% |
| !! | TTAGGAAATTAATGATTTAT+TGG | - | chr4_3:19389215-19389234 | Msa0633670:intron | 15.0% |
| !! | TAGGAAATTAATGATTTATT+GGG | - | chr4_3:19389216-19389235 | Msa0633670:intron | 15.0% |
| !! | TTAAATTTATCTTACTTGAA+CGG | + | chr4_3:19389251-19389270 | None:intergenic | 15.0% |
| !! | ATTAAATTCTATTACAAGTT+TGG | - | chr4_3:19389465-19389484 | Msa0633670:intron | 15.0% |
| !! | TCACTTAATGATGATAATAA+CGG | + | chr4_3:19382507-19382526 | None:intergenic | 20.0% |
| !!! | TTTTTGTTAGATTTTCTGTT+TGG | - | chr4_3:19382918-19382937 | Msa0633670:intron | 20.0% |
| !!! | ATTAAAAGGTAACTTTTGTA+TGG | - | chr4_3:19382993-19383012 | Msa0633670:intron | 20.0% |
| !! | CTACCAAAAAAATTAACTAA+AGG | + | chr4_3:19383127-19383146 | None:intergenic | 20.0% |
| !!! | CATTGTACTCTTATTTTTAT+CGG | + | chr4_3:19383825-19383844 | None:intergenic | 20.0% |
| !! | ATAAAATTGAAGGATATTCA+TGG | + | chr4_3:19383864-19383883 | None:intergenic | 20.0% |
| !! | GTAGAATAGAATAAAATTGA+AGG | + | chr4_3:19383874-19383893 | None:intergenic | 20.0% |
| !!! | TCAATTTTATTCTATTCTAC+AGG | - | chr4_3:19383874-19383893 | Msa0633670:intron | 20.0% |
| !!! | ATTTTTTTTTTCTTACCACA+AGG | - | chr4_3:19383931-19383950 | Msa0633670:intron | 20.0% |
| !! | TATCACAATGAAAGTAAATA+AGG | - | chr4_3:19384414-19384433 | Msa0633670:CDS | 20.0% |
| !! | ATCACAATGAAAGTAAATAA+GGG | - | chr4_3:19384415-19384434 | Msa0633670:CDS | 20.0% |
| !! | AAAACTGAATTATCAAAAGA+AGG | - | chr4_3:19384815-19384834 | Msa0633670:intron | 20.0% |
| !! | TAAACATAATGTGTTCTAAT+AGG | + | chr4_3:19384862-19384881 | None:intergenic | 20.0% |
| !! | GAAAGGAATAATAACAATAA+TGG | + | chr4_3:19385418-19385437 | None:intergenic | 20.0% |
| !!! | ACTCACAATTTTATATAAAC+TGG | + | chr4_3:19385689-19385708 | None:intergenic | 20.0% |
| !! | AATTATGAAAATGATGTTGA+TGG | - | chr4_3:19386285-19386304 | Msa0633670:CDS | 20.0% |
| !! | TAATTCATATATGAAATCAG+AGG | - | chr4_3:19386640-19386659 | Msa0633670:CDS | 20.0% |
| !!! | TTTACTTATTCTATGTTTTG+GGG | - | chr4_3:19387744-19387763 | Msa0633670:intron | 20.0% |
| !! | TGTTGAAAAATAAAACTAGT+AGG | - | chr4_3:19387839-19387858 | Msa0633670:intron | 20.0% |
| !! | ATTAACTATGAAAATGATGA+TGG | - | chr4_3:19386318-19386337 | Msa0633670:CDS | 20.0% |
| !! | GAAATAAATAGAATGAACAA+AGG | + | chr4_3:19388265-19388284 | None:intergenic | 20.0% |
| !!! | CATATATAACTTGTTGATAT+TGG | - | chr4_3:19388686-19388705 | Msa0633670:intron | 20.0% |
| !! | AGGAAATTAATGATTTATTG+GGG | - | chr4_3:19389217-19389236 | Msa0633670:intron | 20.0% |
| !! | ATTTAATTATTCGTCATTCA+GGG | + | chr4_3:19389702-19389721 | None:intergenic | 20.0% |
| !! | AATTTAATTATTCGTCATTC+AGG | + | chr4_3:19389703-19389722 | None:intergenic | 20.0% |
| !! | TTGAAAAGAAGTAAAGAAAT+TGG | - | chr4_3:19390099-19390118 | Msa0633670:intron | 20.0% |
| !!! | TAATATCATGGTATGTTTTT+TGG | - | chr4_3:19390931-19390950 | Msa0633670:intron | 20.0% |
| !!! | TGAACATTTTTCGTTTTTCA+AGG | + | chr4_3:19382340-19382359 | None:intergenic | 25.0% |
| ! | ATCTGAGAATCAATTGATTA+CGG | - | chr4_3:19382440-19382459 | Msa0633670:three_prime_UTR | 25.0% |
| ! | ATTTAGATAATTGTCATCAG+TGG | + | chr4_3:19382478-19382497 | None:intergenic | 25.0% |
| ! | ACATGCATGAATCAAAATTA+TGG | + | chr4_3:19382613-19382632 | None:intergenic | 25.0% |
| ! | GTTGTGATACACAATATTAT+CGG | - | chr4_3:19382712-19382731 | Msa0633670:CDS | 25.0% |
| !!! | TAGTACAAAGTATTGTCAAA+TGG | + | chr4_3:19382793-19382812 | None:intergenic | 25.0% |
| ! | TTCCTTAAACAATATCCTTA+TGG | - | chr4_3:19383085-19383104 | Msa0633670:intron | 25.0% |
| !!! | GACCCTTTAGTTAATTTTTT+TGG | - | chr4_3:19383121-19383140 | Msa0633670:CDS | 25.0% |
| !!! | TGAGATGCTTTCAATTTTTT+TGG | - | chr4_3:19383270-19383289 | Msa0633670:CDS | 25.0% |
| ! | ATTGTGTTGCAATAAAAAAG+TGG | + | chr4_3:19383484-19383503 | None:intergenic | 25.0% |
| ! | AAAATGAGAAAAACAAGTTG+TGG | - | chr4_3:19383575-19383594 | Msa0633670:intron | 25.0% |
| ! | AATAATTGATTAGTGAGCTA+AGG | + | chr4_3:19383794-19383813 | None:intergenic | 25.0% |
| ! | AGCTCACTAATCAATTATTT+AGG | - | chr4_3:19383795-19383814 | Msa0633670:intron | 25.0% |
| ! | CACTAATCAATTATTTAGGT+AGG | - | chr4_3:19383799-19383818 | Msa0633670:intron | 25.0% |
| ! | ATATTATTCCTGTTCTATCA+CGG | + | chr4_3:19383966-19383985 | None:intergenic | 25.0% |
| !! | TGTTTTCATTTGTTTGATTG+TGG | - | chr4_3:19384149-19384168 | Msa0633670:intron | 25.0% |
| ! | AAGTAACGAGTAAAAGAAAA+AGG | + | chr4_3:19384290-19384309 | None:intergenic | 25.0% |
| ! | ATGAAAGTAAATAAGGGAAA+AGG | - | chr4_3:19384421-19384440 | Msa0633670:intron | 25.0% |
| !!! | TTGTTGAAAGTTTGTTTTTC+CGG | - | chr4_3:19384567-19384586 | Msa0633670:CDS | 25.0% |
| ! | GAGATAAATGTATATACTAG+AGG | + | chr4_3:19384645-19384664 | None:intergenic | 25.0% |
| !!! | TTTTGATAATTCAGTTTTGC+AGG | + | chr4_3:19384813-19384832 | None:intergenic | 25.0% |
| !!! | CAAAGTTCTAGTTTAAATCA+GGG | - | chr4_3:19385024-19385043 | Msa0633670:intron | 25.0% |
| !!! | AAAGTTCTAGTTTAAATCAG+GGG | - | chr4_3:19385025-19385044 | Msa0633670:intron | 25.0% |
| !!! | TCAATGATTGTTGTTTCATT+TGG | + | chr4_3:19385293-19385312 | None:intergenic | 25.0% |
| ! | AAAAAACATGTTTGAAAACC+TGG | + | chr4_3:19385381-19385400 | None:intergenic | 25.0% |
| ! | AGATTGAGATACTATAAGAT+AGG | - | chr4_3:19385489-19385508 | Msa0633670:CDS | 25.0% |
| ! | TTGCCAAACAATATCTTATA+GGG | + | chr4_3:19385572-19385591 | None:intergenic | 25.0% |
| ! | ATTGCCAAACAATATCTTAT+AGG | + | chr4_3:19385573-19385592 | None:intergenic | 25.0% |
| ! | GAAATAGCAGTAACAATTAA+TGG | + | chr4_3:19385629-19385648 | None:intergenic | 25.0% |
| !! | TTTCCACATACTTTATGTTT+TGG | - | chr4_3:19386004-19386023 | Msa0633670:CDS | 25.0% |
| !! | TTCCACATACTTTATGTTTT+GGG | - | chr4_3:19386005-19386024 | Msa0633670:CDS | 25.0% |
| ! | ATGAATGAAACATAGTTAAC+TGG | + | chr4_3:19386385-19386404 | None:intergenic | 25.0% |
| ! | ATCATATGTATATCATCTGT+GGG | + | chr4_3:19386435-19386454 | None:intergenic | 25.0% |
| ! | TATCATATGTATATCATCTG+TGG | + | chr4_3:19386436-19386455 | None:intergenic | 25.0% |
| ! | ACTCTTTCTGTTATAGTTAT+TGG | - | chr4_3:19386591-19386610 | Msa0633670:intron | 25.0% |
| ! | AATGTATATACTAGATGACA+AGG | + | chr4_3:19386740-19386759 | None:intergenic | 25.0% |
| !! | AAAATAAAGATTTTGAGCTG+TGG | + | chr4_3:19386768-19386787 | None:intergenic | 25.0% |
| !! | TAAGTTCAATTTCTTGTTTC+AGG | - | chr4_3:19386895-19386914 | Msa0633670:intron | 25.0% |
| !! | TGAGTTGAATTATGTAAAGA+AGG | - | chr4_3:19386942-19386961 | Msa0633670:intron | 25.0% |
| !! | ACTTTTCAATTGATAAAGGT+TGG | - | chr4_3:19384918-19384937 | Msa0633670:intron | 25.0% |
| !! | ATATTCCAGAAAGTATAAAG+TGG | - | chr4_3:19387062-19387081 | Msa0633670:intron | 25.0% |
| !!! | ATAAAGTGGATGTTTTTGAA+AGG | - | chr4_3:19387076-19387095 | Msa0633670:intron | 25.0% |
| ! | AACCAAAAAATCAGAAAACA+AGG | - | chr4_3:19387143-19387162 | Msa0633670:CDS | 25.0% |
| !!! | ATCCTTGTTTTCTGATTTTT+TGG | + | chr4_3:19387148-19387167 | None:intergenic | 25.0% |
| !! | AATTTTTGCTTGGTTTAAAG+TGG | + | chr4_3:19387326-19387345 | None:intergenic | 25.0% |
| !! | TTGTTTTCTGAATTTTTGCT+TGG | + | chr4_3:19387336-19387355 | None:intergenic | 25.0% |
| ! | AACATAAAAAACAAGATCAC+AGG | - | chr4_3:19387467-19387486 | Msa0633670:intron | 25.0% |
| ! | ATGGTATAAAATAAGATGAG+AGG | + | chr4_3:19387547-19387566 | None:intergenic | 25.0% |
| !!! | TCTCATCTTATTTTATACCA+TGG | - | chr4_3:19387546-19387565 | Msa0633670:intron | 25.0% |
| !!! | ATTCTTTCTGTTTTAGTCAT+TGG | - | chr4_3:19388315-19388334 | Msa0633670:CDS | 25.0% |
| ! | TTTCATTTGTACTTTCAGTT+AGG | - | chr4_3:19388390-19388409 | Msa0633670:CDS | 25.0% |
| ! | TTCATTTGTACTTTCAGTTA+GGG | - | chr4_3:19388391-19388410 | Msa0633670:CDS | 25.0% |
| ! | TATATGAATTAACCAACTGA+AGG | + | chr4_3:19388465-19388484 | None:intergenic | 25.0% |
| ! | GATAGCATAAGAGATATATA+AGG | + | chr4_3:19388593-19388612 | None:intergenic | 25.0% |
| ! | TTGATATTGGAATGTATACT+AGG | - | chr4_3:19388699-19388718 | Msa0633670:intron | 25.0% |
| ! | TAGGAGAAACATCAAAAAAA+AGG | - | chr4_3:19388718-19388737 | Msa0633670:CDS | 25.0% |
| ! | ACATCAAAAAAAAGGAAAAG+AGG | - | chr4_3:19388726-19388745 | Msa0633670:CDS | 25.0% |
| ! | AAATCACCTTAAATGAAGAA+GGG | - | chr4_3:19388805-19388824 | Msa0633670:intron | 25.0% |
| !!! | TTCTGAATTCAGCAATTTTT+TGG | - | chr4_3:19388857-19388876 | Msa0633670:intron | 25.0% |
| !!! | TCTGAATTCAGCAATTTTTT+GGG | - | chr4_3:19388858-19388877 | Msa0633670:intron | 25.0% |
| ! | AAAGAAGAAGGAGAATATAT+GGG | - | chr4_3:19388941-19388960 | Msa0633670:intron | 25.0% |
| ! | ATGCTATAATAAATGATGCT+TGG | - | chr4_3:19389092-19389111 | Msa0633670:intron | 25.0% |
| ! | TTTCATAAAGTCCATTCATT+GGG | + | chr4_3:19389551-19389570 | None:intergenic | 25.0% |
| !! | TTTTCATAAAGTCCATTCAT+TGG | + | chr4_3:19389552-19389571 | None:intergenic | 25.0% |
| ! | AAATATGAACACTTGTAGAA+TGG | - | chr4_3:19389569-19389588 | Msa0633670:intron | 25.0% |
| ! | AAAACTTACAATTGTGTTAC+TGG | + | chr4_3:19389876-19389895 | None:intergenic | 25.0% |
| ! | AGCAAAATTAAAAGCAACAT+TGG | + | chr4_3:19389954-19389973 | None:intergenic | 25.0% |
| !! | TAAAAAAAAGCATGCTATTG+AGG | - | chr4_3:19390128-19390147 | Msa0633670:intron | 25.0% |
| ! | GAAAAAACATAGTAAAGAGA+TGG | - | chr4_3:19390206-19390225 | Msa0633670:intron | 25.0% |
| ! | AACATACCTCATCATTATTT+AGG | + | chr4_3:19390377-19390396 | None:intergenic | 25.0% |
| ! | CTTATTAGTAGCAAAATATG+AGG | - | chr4_3:19390496-19390515 | Msa0633670:intron | 25.0% |
| !!! | TCTTAGTATTTTTATCCTGT+AGG | - | chr4_3:19390555-19390574 | Msa0633670:intron | 25.0% |
| ! | TCATCTTCAAAGTCATTAAA+AGG | + | chr4_3:19390676-19390695 | None:intergenic | 25.0% |
| !! | TACATAGAGCTTCTTTTTAT+AGG | - | chr4_3:19390879-19390898 | Msa0633670:intron | 25.0% |
| ! | TAAAAGAGAAGCTAATATCA+TGG | - | chr4_3:19390919-19390938 | Msa0633670:intron | 25.0% |
| ! | TTTCGTGATACATAACAATT+TGG | + | chr4_3:19391045-19391064 | None:intergenic | 25.0% |
| ! | AAATTGTTCAGTAATGTCAA+TGG | - | chr4_3:19391139-19391158 | Msa0633670:five_prime_UTR | 25.0% |
| TTCTCAGATGAATTGAAAAG+AGG | + | chr4_3:19382429-19382448 | None:intergenic | 30.0% | |
| GAATCAAAATTATGGTCAAG+AGG | + | chr4_3:19382605-19382624 | None:intergenic | 30.0% | |
| TTGTTAATAACAGCTATAGC+TGG | + | chr4_3:19382835-19382854 | None:intergenic | 30.0% | |
| ATAGCTGTTATTAACAACAC+TGG | - | chr4_3:19382838-19382857 | Msa0633670:CDS | 30.0% | |
| GCATTGCTTAAGGAATTAAA+AGG | - | chr4_3:19382979-19382998 | Msa0633670:intron | 30.0% | |
| TGCCATAAGGATATTGTTTA+AGG | + | chr4_3:19383090-19383109 | None:intergenic | 30.0% | |
| ! | TTTGGTAGCACAATATTATC+AGG | - | chr4_3:19383139-19383158 | Msa0633670:CDS | 30.0% |
| AGCTATTACTTGATTAAGAC+TGG | + | chr4_3:19383181-19383200 | None:intergenic | 30.0% | |
| GTCTTAATCAAGTAATAGCT+AGG | - | chr4_3:19383181-19383200 | Msa0633670:CDS | 30.0% | |
| ATAGTACTATGATCGCTTTA+AGG | + | chr4_3:19383212-19383231 | None:intergenic | 30.0% | |
| !!! | ATGCTTTCAATTTTTTTGGC+CGG | - | chr4_3:19383274-19383293 | Msa0633670:CDS | 30.0% |
| CAGATTCATCTACAAACATT+AGG | + | chr4_3:19383538-19383557 | None:intergenic | 30.0% | |
| CTCTTATAAATGCAACTGAA+AGG | + | chr4_3:19383665-19383684 | None:intergenic | 30.0% | |
| TTATTCATGGGACAACTTTA+AGG | + | chr4_3:19383771-19383790 | None:intergenic | 30.0% | |
| TTTATTCTATTCTACAGGAG+AGG | - | chr4_3:19383879-19383898 | Msa0633670:intron | 30.0% | |
| ATTGCTAGATTATTGCTATG+TGG | + | chr4_3:19384042-19384061 | None:intergenic | 30.0% | |
| !! | TTGCATTTGTGTTGATTTAC+AGG | - | chr4_3:19384382-19384401 | Msa0633670:CDS | 30.0% |
| AAAGTAAATAAGGGAAAAGG+AGG | - | chr4_3:19384424-19384443 | Msa0633670:intron | 30.0% | |
| CATGTTAATGTGAACAATGA+TGG | - | chr4_3:19384508-19384527 | Msa0633670:intron | 30.0% | |
| GAACCAAGAAATGAAACTTA+CGG | + | chr4_3:19384775-19384794 | None:intergenic | 30.0% | |
| TAAGTTTCATTTCTTGGTTC+AGG | - | chr4_3:19384775-19384794 | Msa0633670:intron | 30.0% | |
| ATGTGTTCTAATAGGTGAAA+AGG | + | chr4_3:19384854-19384873 | None:intergenic | 30.0% | |
| !!! | ATTTTGATTCAATTCAGCAG+AGG | + | chr4_3:19384968-19384987 | None:intergenic | 30.0% |
| !! | GCAAAGTTCTAGTTTAAATC+AGG | - | chr4_3:19385023-19385042 | Msa0633670:intron | 30.0% |
| ATGAAGAATACAGTGATGAA+AGG | + | chr4_3:19385435-19385454 | None:intergenic | 30.0% | |
| GTAACAATTAATGGCATGAA+TGG | + | chr4_3:19385620-19385639 | None:intergenic | 30.0% | |
| !! | CTCTGGGATTAGTATAAATA+GGG | - | chr4_3:19385663-19385682 | Msa0633670:intron | 30.0% |
| ATCCATTGTATCGTAATAGT+TGG | + | chr4_3:19385754-19385773 | None:intergenic | 30.0% | |
| ! | TCCACATACTTTATGTTTTG+GGG | - | chr4_3:19386006-19386025 | Msa0633670:CDS | 30.0% |
| !! | TGTCGCTTGATCATTTTAAA+AGG | - | chr4_3:19386226-19386245 | Msa0633670:CDS | 30.0% |
| GAAACATAGTTAACTGGTAA+GGG | + | chr4_3:19386379-19386398 | None:intergenic | 30.0% | |
| TGAAACATAGTTAACTGGTA+AGG | + | chr4_3:19386380-19386399 | None:intergenic | 30.0% | |
| TCATATGTATATCATCTGTG+GGG | + | chr4_3:19386434-19386453 | None:intergenic | 30.0% | |
| TAACTAAAACGGTAGAAACA+AGG | + | chr4_3:19386502-19386521 | None:intergenic | 30.0% | |
| ACTAACGTAAACATCATCTT+TGG | + | chr4_3:19386833-19386852 | None:intergenic | 30.0% | |
| AACATCCACTTTATACTTTC+TGG | + | chr4_3:19387070-19387089 | None:intergenic | 30.0% | |
| !!! | AAAGGATCTTTTTCAAAGCA+AGG | - | chr4_3:19387094-19387113 | Msa0633670:intron | 30.0% |
| !!! | AAGGATCTTTTTCAAAGCAA+GGG | - | chr4_3:19387095-19387114 | Msa0633670:intron | 30.0% |
| !!! | ATTTTTTGGTTGCTTTGAAG+TGG | + | chr4_3:19387134-19387153 | None:intergenic | 30.0% |
| AAATTCAGAAAACAACGATG+AGG | - | chr4_3:19387341-19387360 | Msa0633670:CDS | 30.0% | |
| AATTCAGAAAACAACGATGA+GGG | - | chr4_3:19387342-19387361 | Msa0633670:CDS | 30.0% | |
| AATAAAGGACCAGTAATGAT+TGG | + | chr4_3:19387515-19387534 | None:intergenic | 30.0% | |
| GAGAGGAGCAAATATAATAA+AGG | + | chr4_3:19387530-19387549 | None:intergenic | 30.0% | |
| GTTATGTAGTGCAACAAAAA+GGG | + | chr4_3:19387629-19387648 | None:intergenic | 30.0% | |
| TGTTATGTAGTGCAACAAAA+AGG | + | chr4_3:19387630-19387649 | None:intergenic | 30.0% | |
| GAAAAATAAAACTAGTAGGC+CGG | - | chr4_3:19387843-19387862 | Msa0633670:intron | 30.0% | |
| TAATCATCAAGTGACATTGA+TGG | + | chr4_3:19387956-19387975 | None:intergenic | 30.0% | |
| !! | AAATGATAATGGTGATGTTG+AGG | - | chr4_3:19388027-19388046 | Msa0633670:intron | 30.0% |
| !! | AATGATAATGGTGATGTTGA+GGG | - | chr4_3:19388028-19388047 | Msa0633670:intron | 30.0% |
| GAAAACTAATGACAATCCAA+TGG | - | chr4_3:19388081-19388100 | Msa0633670:intron | 30.0% | |
| !!! | CTTCTTTGTTTTGACTGTTT+TGG | - | chr4_3:19388236-19388255 | Msa0633670:CDS | 30.0% |
| CAGAAAGAATGAACAACAAA+AGG | + | chr4_3:19388305-19388324 | None:intergenic | 30.0% | |
| !!! | TTTCTGTTTTAGTCATTGGT+TGG | - | chr4_3:19388319-19388338 | Msa0633670:CDS | 30.0% |
| GCTAACTCAATATAGATAAG+AGG | + | chr4_3:19388432-19388451 | None:intergenic | 30.0% | |
| TATTCAGAATCATCTGTGTA+CGG | - | chr4_3:19388500-19388519 | Msa0633670:CDS | 30.0% | |
| AAAAAAAGGAAAAGAGGAAG+AGG | - | chr4_3:19388732-19388751 | Msa0633670:CDS | 30.0% | |
| GAAATCACCTTAAATGAAGA+AGG | - | chr4_3:19388804-19388823 | Msa0633670:intron | 30.0% | |
| AATCACCTTAAATGAAGAAG+GGG | - | chr4_3:19388806-19388825 | Msa0633670:intron | 30.0% | |
| !! | TCAGAAACTATCTTTTGAGT+TGG | + | chr4_3:19388843-19388862 | None:intergenic | 30.0% |
| TTCCAATTAGTGTAAGTAAG+AGG | + | chr4_3:19388912-19388931 | None:intergenic | 30.0% | |
| TCTTACTTACACTAATTGGA+AGG | - | chr4_3:19388911-19388930 | Msa0633670:intron | 30.0% | |
| CATATATTCTCCTTCTTCTT+TGG | + | chr4_3:19388942-19388961 | None:intergenic | 30.0% | |
| CAAAGAAGAAGGAGAATATA+TGG | - | chr4_3:19388940-19388959 | Msa0633670:intron | 30.0% | |
| AGATACATTGTTCCTGAAAA+AGG | - | chr4_3:19389055-19389074 | Msa0633670:exon | 30.0% | |
| TAATAAATGATGCTTGGAGA+CGG | - | chr4_3:19389098-19389117 | Msa0633670:intron | 30.0% | |
| ! | CATTGATGATTTCAGGAAAT+TGG | - | chr4_3:19389327-19389346 | Msa0633670:intron | 30.0% |
| CTTATGATAGCAAAGCTTAT+GGG | + | chr4_3:19389405-19389424 | None:intergenic | 30.0% | |
| ! | CATAAGCTTTGCTATCATAA+GGG | - | chr4_3:19389404-19389423 | Msa0633670:intron | 30.0% |
| GATTTAAGTGCCAATAATAC+CGG | + | chr4_3:19389658-19389677 | None:intergenic | 30.0% | |
| GTGATGATTTCTACTACTAT+TGG | - | chr4_3:19389732-19389751 | Msa0633670:intron | 30.0% | |
| ATAAAAACTTCTGCTTGAGT+AGG | + | chr4_3:19389809-19389828 | None:intergenic | 30.0% | |
| CAAGATTTGATCGTAAATTC+TGG | - | chr4_3:19389985-19390004 | Msa0633670:intron | 30.0% | |
| TTTCTTTACCGAAGATAGTT+CGG | + | chr4_3:19390032-19390051 | None:intergenic | 30.0% | |
| !! | TTACTTCTTTTCAAGAGAGA+AGG | + | chr4_3:19390093-19390112 | None:intergenic | 30.0% |
| AAGTGACAAGATTCAAGAAA+TGG | - | chr4_3:19390161-19390180 | Msa0633670:intron | 30.0% | |
| CCATTATTGTTGCAACTATA+AGG | + | chr4_3:19390402-19390421 | None:intergenic | 30.0% | |
| CCTTATAGTTGCAACAATAA+TGG | - | chr4_3:19390399-19390418 | Msa0633670:intron | 30.0% | |
| TTCATTACCATGAGGAATAT+TGG | - | chr4_3:19390428-19390447 | Msa0633670:intron | 30.0% | |
| TAGTAGCAAAATATGAGGAA+TGG | - | chr4_3:19390501-19390520 | Msa0633670:intron | 30.0% | |
| TTTATCCTGTAGGTAAATCA+TGG | - | chr4_3:19390565-19390584 | Msa0633670:intron | 30.0% | |
| !! | AGAACAACATTTTGATGACT+TGG | - | chr4_3:19390630-19390649 | Msa0633670:intron | 30.0% |
| ! | ACCTTATTCCTTTCTACTTT+TGG | - | chr4_3:19390835-19390854 | Msa0633670:intron | 30.0% |
| !! | CCTTATTCCTTTCTACTTTT+GGG | - | chr4_3:19390836-19390855 | Msa0633670:intron | 30.0% |
| TTATCAACCCAAAAGTAGAA+AGG | + | chr4_3:19390846-19390865 | None:intergenic | 30.0% | |
| ! | AGAGCTTCTTTTTATAGGTT+TGG | - | chr4_3:19390884-19390903 | Msa0633670:intron | 30.0% |
| AAAATTTACCCAACTCGATA+AGG | - | chr4_3:19390954-19390973 | Msa0633670:intron | 30.0% | |
| ! | ATGTATCACGAAAGTGATTT+TGG | - | chr4_3:19391052-19391071 | Msa0633670:five_prime_UTR | 30.0% |
| !! | TGTGAATACTTTGCTATTGT+TGG | - | chr4_3:19391110-19391129 | Msa0633670:five_prime_UTR | 30.0% |
| AAAAGAGGTCAGTGAAGAAT+CGG | + | chr4_3:19382414-19382433 | None:intergenic | 35.0% | |
| AAACTGGGCAATGTGAAAAT+TGG | + | chr4_3:19382577-19382596 | None:intergenic | 35.0% | |
| GACGACAAACAGTTATAAGA+AGG | + | chr4_3:19382675-19382694 | None:intergenic | 35.0% | |
| CTACTATGTTCAGGATTGTT+TGG | - | chr4_3:19382867-19382886 | Msa0633670:CDS | 35.0% | |
| AAACGCTAACAAGTGTCTTT+AGG | - | chr4_3:19382956-19382975 | Msa0633670:intron | 35.0% | |
| AACGCTAACAAGTGTCTTTA+GGG | - | chr4_3:19382957-19382976 | Msa0633670:intron | 35.0% | |
| ! | AGTGAAAGGAAAACTAGTCT+TGG | + | chr4_3:19383063-19383082 | None:intergenic | 35.0% |
| !!! | AAGACTAGTTTTCCTTTCAC+TGG | - | chr4_3:19383062-19383081 | Msa0633670:intron | 35.0% |
| TTGTTTAAGGAACCAGTGAA+AGG | + | chr4_3:19383077-19383096 | None:intergenic | 35.0% | |
| TCATACTAACAAGTGCCATA+AGG | + | chr4_3:19383103-19383122 | None:intergenic | 35.0% | |
| CTCAACACATTATCGTTAGA+AGG | + | chr4_3:19383254-19383273 | None:intergenic | 35.0% | |
| GTTGCAATAAAAAAGTGGCT+GGG | + | chr4_3:19383479-19383498 | None:intergenic | 35.0% | |
| TGTTGCAATAAAAAAGTGGC+TGG | + | chr4_3:19383480-19383499 | None:intergenic | 35.0% | |
| GAAGACAATTACATTGCCTA+TGG | + | chr4_3:19383512-19383531 | None:intergenic | 35.0% | |
| TAAGTCAAGTCAAAACATCG+TGG | - | chr4_3:19383687-19383706 | Msa0633670:CDS | 35.0% | |
| ! | ACTAACATTTTCCAGAGCTA+AGG | + | chr4_3:19383738-19383757 | None:intergenic | 35.0% |
| AGTGAGCTAAGGTTATTCAT+GGG | + | chr4_3:19383783-19383802 | None:intergenic | 35.0% | |
| TAGTGAGCTAAGGTTATTCA+TGG | + | chr4_3:19383784-19383803 | None:intergenic | 35.0% | |
| TTGTATAACCGTGATAGAAC+AGG | - | chr4_3:19383955-19383974 | Msa0633670:intron | 35.0% | |
| !! | CGGTAGTTTTTGGAGAATAT+CGG | + | chr4_3:19384013-19384032 | None:intergenic | 35.0% |
| TTATTGCTATGTGGAGTCTT+CGG | + | chr4_3:19384033-19384052 | None:intergenic | 35.0% | |
| CACAACGGATCATTTAACAA+AGG | + | chr4_3:19384210-19384229 | None:intergenic | 35.0% | |
| AGCAGAATATTGCAACACAA+CGG | + | chr4_3:19384225-19384244 | None:intergenic | 35.0% | |
| ACACACATACATTACACTCT+GGG | + | chr4_3:19384361-19384380 | None:intergenic | 35.0% | |
| TACACACATACATTACACTC+TGG | + | chr4_3:19384362-19384381 | None:intergenic | 35.0% | |
| CCGATGTAAACATCATCTTT+GGG | + | chr4_3:19384712-19384731 | None:intergenic | 35.0% | |
| CCCAAAGATGATGTTTACAT+CGG | - | chr4_3:19384709-19384728 | Msa0633670:CDS | 35.0% | |
| ACCGATGTAAACATCATCTT+TGG | + | chr4_3:19384713-19384732 | None:intergenic | 35.0% | |
| GAACCGTAAGTTTCATTTCT+TGG | - | chr4_3:19384769-19384788 | Msa0633670:intron | 35.0% | |
| !! | TTCTAGTTTAAATCAGGGGA+TGG | - | chr4_3:19385029-19385048 | Msa0633670:intron | 35.0% |
| AAACAACAATCATTGACAGC+TGG | - | chr4_3:19385147-19385166 | Msa0633670:intron | 35.0% | |
| AAACAACAATCATTGACAGC+TGG | - | chr4_3:19385147-19385166 | Msa0633670:intron | 35.0% | |
| AACATAAAAAGCAAGATCGC+AGG | - | chr4_3:19385355-19385374 | Msa0633670:intron | 35.0% | |
| CACTGTATTCTTCATTAGTG+AGG | - | chr4_3:19385440-19385459 | Msa0633670:CDS | 35.0% | |
| ATTCTTCATTAGTGAGGTTC+TGG | - | chr4_3:19385446-19385465 | Msa0633670:CDS | 35.0% | |
| ACAATATCTTATAGGGTGGT+GGG | + | chr4_3:19385565-19385584 | None:intergenic | 35.0% | |
| AACAATATCTTATAGGGTGG+TGG | + | chr4_3:19385566-19385585 | None:intergenic | 35.0% | |
| CCAAACAATATCTTATAGGG+TGG | + | chr4_3:19385569-19385588 | None:intergenic | 35.0% | |
| CCACCCTATAAGATATTGTT+TGG | - | chr4_3:19385566-19385585 | Msa0633670:CDS | 35.0% | |
| !! | CTGCTATTTCAACTGTAAAG+TGG | - | chr4_3:19385639-19385658 | Msa0633670:intron | 35.0% |
| CCTATTTATACTAATCCCAG+AGG | + | chr4_3:19385665-19385684 | None:intergenic | 35.0% | |
| !! | CCTCTGGGATTAGTATAAAT+AGG | - | chr4_3:19385662-19385681 | Msa0633670:intron | 35.0% |
| TTCTCATTTGAGAGTTAGAG+TGG | - | chr4_3:19385708-19385727 | Msa0633670:intron | 35.0% | |
| AGCCAACTATTACGATACAA+TGG | - | chr4_3:19385749-19385768 | Msa0633670:intron | 35.0% | |
| TTGAAAATGGAGGAAGTTTG+TGG | - | chr4_3:19385920-19385939 | Msa0633670:intron | 35.0% | |
| ACCCCAAAACATAAAGTATG+TGG | + | chr4_3:19386010-19386029 | None:intergenic | 35.0% | |
| GTGTTGAAAAACCAAAGTAG+CGG | - | chr4_3:19386092-19386111 | Msa0633670:CDS | 35.0% | |
| TGTTGAAAAACCAAAGTAGC+GGG | - | chr4_3:19386093-19386112 | Msa0633670:CDS | 35.0% | |
| TTCTTCTGCTCAATTCCAAA+AGG | - | chr4_3:19386146-19386165 | Msa0633670:CDS | 35.0% | |
| ! | CATGATCAACAACATCCTTT+TGG | + | chr4_3:19386164-19386183 | None:intergenic | 35.0% |
| CAAAAGGATGTTGTTGATCA+TGG | - | chr4_3:19386162-19386181 | Msa0633670:CDS | 35.0% | |
| ! | TAAGCAACAAGTTGAAGTTG+AGG | - | chr4_3:19386251-19386270 | Msa0633670:CDS | 35.0% |
| !! | TGAAAATGATGTTGATGGTG+AGG | - | chr4_3:19386290-19386309 | Msa0633670:CDS | 35.0% |
| !! | GAAAATGATGTTGATGGTGA+GGG | - | chr4_3:19386291-19386310 | Msa0633670:CDS | 35.0% |
| !! | GTAAGGGTATTACCTTTCAT+TGG | + | chr4_3:19386363-19386382 | None:intergenic | 35.0% |
| ATAGCACAATAGCAACAGAA+GGG | + | chr4_3:19386470-19386489 | None:intergenic | 35.0% | |
| CAGAAAGAGTGAACAACAAA+GGG | + | chr4_3:19386581-19386600 | None:intergenic | 35.0% | |
| ACAGAAAGAGTGAACAACAA+AGG | + | chr4_3:19386582-19386601 | None:intergenic | 35.0% | |
| ATATGGCAGAAAAAGGCAAA+GGG | + | chr4_3:19386675-19386694 | None:intergenic | 35.0% | |
| TATATGGCAGAAAAAGGCAA+AGG | + | chr4_3:19386676-19386695 | None:intergenic | 35.0% | |
| ACGTTAGTTCACAACTCAAA+CGG | - | chr4_3:19386845-19386864 | Msa0633670:intron | 35.0% | |
| ACATAATTCAACTCAGCCAA+TGG | + | chr4_3:19386937-19386956 | None:intergenic | 35.0% | |
| ! | TTGCAATCCTTTTCAGCTAT+TGG | - | chr4_3:19386971-19386990 | Msa0633670:intron | 35.0% |
| AAGTGTTCCAATAGCTGAAA+AGG | + | chr4_3:19386981-19387000 | None:intergenic | 35.0% | |
| !!! | ATCTTTTTCAAAGCAAGGGA+TGG | - | chr4_3:19387099-19387118 | Msa0633670:intron | 35.0% |
| !!! | ATTTTTTGCTTGCTGTGAAG+TGG | + | chr4_3:19387230-19387249 | None:intergenic | 35.0% |
| TTATACCATGGTTCAAAACC+TGG | - | chr4_3:19387558-19387577 | Msa0633670:intron | 35.0% | |
| ! | AACTTCTTTTGCTTCTTGGA+AGG | + | chr4_3:19387932-19387951 | None:intergenic | 35.0% |
| ! | TGGTAACTTCTTTTGCTTCT+TGG | + | chr4_3:19387936-19387955 | None:intergenic | 35.0% |
| ATATCATCCTCTTCTTCAAG+TGG | + | chr4_3:19387998-19388017 | None:intergenic | 35.0% | |
| ACTAATGACAATCCAATGGA+AGG | - | chr4_3:19388085-19388104 | Msa0633670:intron | 35.0% | |
| CATATCATATGTGTCATCTG+TGG | + | chr4_3:19388169-19388188 | None:intergenic | 35.0% | |
| !!! | CTTTGTTTTGACTGTTTTGG+TGG | - | chr4_3:19388239-19388258 | Msa0633670:CDS | 35.0% |
| !! | CTTTCTGTTGGTTTAGCTAT+TGG | - | chr4_3:19388342-19388361 | Msa0633670:CDS | 35.0% |
| TCAGTTAGGGTTCTATTGTT+AGG | - | chr4_3:19388404-19388423 | Msa0633670:CDS | 35.0% | |
| ACCAACTGAAGGATACAAAT+CGG | + | chr4_3:19388454-19388473 | None:intergenic | 35.0% | |
| ATTCAGAATCATCTGTGTAC+GGG | - | chr4_3:19388501-19388520 | Msa0633670:CDS | 35.0% | |
| TATGCTCGAGAATTCATGAT+CGG | - | chr4_3:19388763-19388782 | Msa0633670:CDS | 35.0% | |
| ATTTCTTCTCTTTCAGCAAG+TGG | + | chr4_3:19388789-19388808 | None:intergenic | 35.0% | |
| !!! | ATCTTTTGAGTTGGACCAAT+GGG | + | chr4_3:19388834-19388853 | None:intergenic | 35.0% |
| !!! | TATCTTTTGAGTTGGACCAA+TGG | + | chr4_3:19388835-19388854 | None:intergenic | 35.0% |
| !!! | ATTTTTTGGGATCAGTAGCA+AGG | - | chr4_3:19388871-19388890 | Msa0633670:intron | 35.0% |
| GTCCTCTTACTTACACTAAT+TGG | - | chr4_3:19388907-19388926 | Msa0633670:intron | 35.0% | |
| AATTTCCTAAAGTCAGCTTC+TGG | + | chr4_3:19389205-19389224 | None:intergenic | 35.0% | |
| ! | TGACTCTCATTGATGATTTC+AGG | - | chr4_3:19389320-19389339 | Msa0633670:intron | 35.0% |
| CCTTATGATAGCAAAGCTTA+TGG | + | chr4_3:19389406-19389425 | None:intergenic | 35.0% | |
| ! | CCATAAGCTTTGCTATCATA+AGG | - | chr4_3:19389403-19389422 | Msa0633670:intron | 35.0% |
| TGCTATCATAAGGGAAAAAC+TGG | - | chr4_3:19389413-19389432 | Msa0633670:intron | 35.0% | |
| !! | TGGATTTTAGTCCCAATGAA+TGG | - | chr4_3:19389537-19389556 | Msa0633670:intron | 35.0% |
| ! | TTCTGATGTTGGTGAAGAAA+TGG | - | chr4_3:19389621-19389640 | Msa0633670:intron | 35.0% |
| ! | ATGTTGGTGAAGAAATGGAT+GGG | - | chr4_3:19389626-19389645 | Msa0633670:intron | 35.0% |
| GAAACACGACAAAGTAAGAA+AGG | - | chr4_3:19389830-19389849 | Msa0633670:intron | 35.0% | |
| ! | CAATTGTGTTACTGGTAACT+TGG | + | chr4_3:19389868-19389887 | None:intergenic | 35.0% |
| ATCTTCGGTAAAGAAAAACC+TGG | - | chr4_3:19390036-19390055 | Msa0633670:intron | 35.0% | |
| TGACAAGATTCAAGAAATGG+AGG | - | chr4_3:19390164-19390183 | Msa0633670:intron | 35.0% | |
| GGAGGTAAAACATGAAAAGA+TGG | - | chr4_3:19390182-19390201 | Msa0633670:intron | 35.0% | |
| GGAAATTGCAAGTTCTTCTA+AGG | - | chr4_3:19390241-19390260 | Msa0633670:intron | 35.0% | |
| TATCTTGGTCTGAATTGCTT+TGG | + | chr4_3:19390278-19390297 | None:intergenic | 35.0% | |
| AAGCAATTCAGACCAAGATA+TGG | - | chr4_3:19390278-19390297 | Msa0633670:intron | 35.0% | |
| AGCAATTCAGACCAAGATAT+GGG | - | chr4_3:19390279-19390298 | Msa0633670:intron | 35.0% | |
| ATGAATGTAGCCCATTATTG+TGG | + | chr4_3:19390338-19390357 | None:intergenic | 35.0% | |
| CTCATCATTATTTAGGCCAT+GGG | + | chr4_3:19390370-19390389 | None:intergenic | 35.0% | |
| ! | TTCCTCATGGTAATGAATGT+AGG | + | chr4_3:19390425-19390444 | None:intergenic | 35.0% |
| AATGCTATAGCACTCAATGA+GGG | + | chr4_3:19390457-19390476 | None:intergenic | 35.0% | |
| TAATGCTATAGCACTCAATG+AGG | + | chr4_3:19390458-19390477 | None:intergenic | 35.0% | |
| CATCAGACAATTGTTCTTCA+AGG | + | chr4_3:19390591-19390610 | None:intergenic | 35.0% | |
| AGAACAACCTTTCGATTACT+TGG | - | chr4_3:19390699-19390718 | Msa0633670:intron | 35.0% | |
| TCTTCTTCCAAGTAATCGAA+AGG | + | chr4_3:19390709-19390728 | None:intergenic | 35.0% | |
| ! | AAGACCAATCTTTTCATGAC+TGG | - | chr4_3:19390734-19390753 | Msa0633670:intron | 35.0% |
| ! | AGACCAATCTTTTCATGACT+GGG | - | chr4_3:19390735-19390754 | Msa0633670:intron | 35.0% |
| CCCAAAAGTAGAAAGGAATA+AGG | + | chr4_3:19390839-19390858 | None:intergenic | 35.0% | |
| AACAACATCCTTATCGAGTT+GGG | + | chr4_3:19390965-19390984 | None:intergenic | 35.0% | |
| AAACAACATCCTTATCGAGT+TGG | + | chr4_3:19390966-19390985 | None:intergenic | 35.0% | |
| AACTCGATAAGGATGTTGTT+TGG | - | chr4_3:19390965-19390984 | Msa0633670:intron | 35.0% | |
| !!! | ACGAAAGTGATTTTGGAGTT+TGG | - | chr4_3:19391059-19391078 | Msa0633670:five_prime_UTR | 35.0% |
| AAGAATCGGTGGAGAAAATG+TGG | + | chr4_3:19382400-19382419 | None:intergenic | 40.0% | |
| ATGTGAAAATTGGAGGAGGA+AGG | + | chr4_3:19382567-19382586 | None:intergenic | 40.0% | |
| ATGCAACAGTCGTGATTCAA+GGG | + | chr4_3:19382645-19382664 | None:intergenic | 40.0% | |
| AATGCAACAGTCGTGATTCA+AGG | + | chr4_3:19382646-19382665 | None:intergenic | 40.0% | |
| TGGTGATAGCTACTATGTTC+AGG | - | chr4_3:19382858-19382877 | Msa0633670:CDS | 40.0% | |
| !! | TGTCTTTAGGGCATTGCTTA+AGG | - | chr4_3:19382969-19382988 | Msa0633670:intron | 40.0% |
| !! | ACTATGATCGCTTTAAGGAG+TGG | + | chr4_3:19383207-19383226 | None:intergenic | 40.0% |
| !!! | CAATTTTTTTGGCCGGTAGA+CGG | - | chr4_3:19383281-19383300 | Msa0633670:CDS | 40.0% |
| ! | GTGTGTGTGTGTAAGTTTTC+AGG | + | chr4_3:19383321-19383340 | None:intergenic | 40.0% |
| GTTAGGCAGGACATTTATTG+TGG | + | chr4_3:19383380-19383399 | None:intergenic | 40.0% | |
| ATGTCCTGCCTAACAAATCT+CGG | - | chr4_3:19383386-19383405 | Msa0633670:CDS | 40.0% | |
| ! | ATGGCACTATAGTCTAAGGT+TGG | + | chr4_3:19383450-19383469 | None:intergenic | 40.0% |
| CAGTATGGCACTATAGTCTA+AGG | + | chr4_3:19383454-19383473 | None:intergenic | 40.0% | |
| TGCAACACAATCATCACCAT+AGG | - | chr4_3:19383493-19383512 | Msa0633670:CDS | 40.0% | |
| AAGTCAAAACATCGTGGCTT+AGG | - | chr4_3:19383693-19383712 | Msa0633670:intron | 40.0% | |
| AGTCAAAACATCGTGGCTTA+GGG | - | chr4_3:19383694-19383713 | Msa0633670:intron | 40.0% | |
| GACTAACATTTCCTTAGCTC+TGG | - | chr4_3:19383724-19383743 | Msa0633670:intron | 40.0% | |
| TGATTGTGGTTACACCCTAT+TGG | - | chr4_3:19384163-19384182 | Msa0633670:intron | 40.0% | |
| AGCACAACATGACACCAATA+GGG | + | chr4_3:19384180-19384199 | None:intergenic | 40.0% | |
| AAGCACAACATGACACCAAT+AGG | + | chr4_3:19384181-19384200 | None:intergenic | 40.0% | |
| !! | TTACACTCTGGGATTTCTCT+TGG | + | chr4_3:19384350-19384369 | None:intergenic | 40.0% |
| AAGAAAGAGAGAAACAGTGG+TGG | + | chr4_3:19384620-19384639 | None:intergenic | 40.0% | |
| ! | ACCACTGTTTCTCTCTTTCT+TGG | - | chr4_3:19384619-19384638 | Msa0633670:CDS | 40.0% |
| ATGACTACTATAGACTCTGC+TGG | - | chr4_3:19385096-19385115 | Msa0633670:intron | 40.0% | |
| TGACTACTATAGACTCTGCT+GGG | - | chr4_3:19385097-19385116 | Msa0633670:intron | 40.0% | |
| CGTTTGATCATGCTTGAGAA+TGG | + | chr4_3:19385127-19385146 | None:intergenic | 40.0% | |
| TTTGAGAAGAACCTGCAACT+TGG | + | chr4_3:19385182-19385201 | None:intergenic | 40.0% | |
| CATTTGGTCATGCTTGAGAA+TGG | + | chr4_3:19385277-19385296 | None:intergenic | 40.0% | |
| TAGCATGGTATGGTATGGTA+TGG | + | chr4_3:19385532-19385551 | None:intergenic | 40.0% | |
| GAAACTAGCATGGTATGGTA+TGG | + | chr4_3:19385537-19385556 | None:intergenic | 40.0% | |
| ATGGAGAAACTAGCATGGTA+TGG | + | chr4_3:19385542-19385561 | None:intergenic | 40.0% | |
| ! | AGTTAGAGTGGATTCTCTCT+TGG | - | chr4_3:19385720-19385739 | Msa0633670:intron | 40.0% |
| CGATACAATGGATCAAAACC+TGG | - | chr4_3:19385761-19385780 | Msa0633670:intron | 40.0% | |
| GCTAGTGAAGGAAGAAAGAT+GGG | + | chr4_3:19385828-19385847 | None:intergenic | 40.0% | |
| AGCTAGTGAAGGAAGAAAGA+TGG | + | chr4_3:19385829-19385848 | None:intergenic | 40.0% | |
| TTCTTCCTTCACTAGCTAAC+AGG | - | chr4_3:19385832-19385851 | Msa0633670:intron | 40.0% | |
| TTGAACCTGTTAGCTAGTGA+AGG | + | chr4_3:19385840-19385859 | None:intergenic | 40.0% | |
| AGTGTGTGCACGTTTGAAAA+TGG | - | chr4_3:19385907-19385926 | Msa0633670:intron | 40.0% | |
| ATGGAGGAAGTTTGTGGAAT+AGG | - | chr4_3:19385926-19385945 | Msa0633670:intron | 40.0% | |
| AAATGATCAAGCGACACTGA+TGG | + | chr4_3:19386222-19386241 | None:intergenic | 40.0% | |
| GGGTATTACCTTTCATTGGA+GGG | + | chr4_3:19386359-19386378 | None:intergenic | 40.0% | |
| ! | AGGGTATTACCTTTCATTGG+AGG | + | chr4_3:19386360-19386379 | None:intergenic | 40.0% |
| CATAGCACAATAGCAACAGA+AGG | + | chr4_3:19386471-19386490 | None:intergenic | 40.0% | |
| ! | CTTCTGTTGCTATTGTGCTA+TGG | - | chr4_3:19386469-19386488 | Msa0633670:intron | 40.0% |
| CAGCAGTATATGGCAGAAAA+AGG | + | chr4_3:19386682-19386701 | None:intergenic | 40.0% | |
| ATACACAGCACAGCAGTATA+TGG | + | chr4_3:19386692-19386711 | None:intergenic | 40.0% | |
| TGTGCTGTGTATCATTCAGT+TGG | - | chr4_3:19386700-19386719 | Msa0633670:intron | 40.0% | |
| !! | TTTGGTTCTTGATAGAGACG+AGG | - | chr4_3:19386803-19386822 | Msa0633670:intron | 40.0% |
| ACTTACAGTTCTCCACTAGA+AGG | + | chr4_3:19386880-19386899 | None:intergenic | 40.0% | |
| CTTGAGAATGGATCGATTAG+CGG | + | chr4_3:19387185-19387204 | None:intergenic | 40.0% | |
| CCATTCTCAAGCATGATCAA+CGG | - | chr4_3:19385124-19385143 | Msa0633670:CDS | 40.0% | |
| CCATTCTCATGCATGAACAA+CGG | - | chr4_3:19387290-19387309 | Msa0633670:CDS | 40.0% | |
| AAAAAACAAGATCACAGGCC+AGG | - | chr4_3:19387472-19387491 | Msa0633670:intron | 40.0% | |
| GCAAAGCATGTTTGAAAACC+TGG | + | chr4_3:19387493-19387512 | None:intergenic | 40.0% | |
| CATGCTTTGCCAATCATTAC+TGG | - | chr4_3:19387503-19387522 | Msa0633670:intron | 40.0% | |
| AAAAGCTTAGTCCAAGTCAG+AGG | + | chr4_3:19387584-19387603 | None:intergenic | 40.0% | |
| TGTAGTGCAACAAAAAGGGT+AGG | + | chr4_3:19387625-19387644 | None:intergenic | 40.0% | |
| TATTGCAGCAAAGAGAAGCT+TGG | - | chr4_3:19387659-19387678 | Msa0633670:intron | 40.0% | |
| TTAATCCAACGAACTGAGAC+CGG | + | chr4_3:19387865-19387884 | None:intergenic | 40.0% | |
| CAGTTCTGCTCAATTTCAAG+AGG | - | chr4_3:19387889-19387908 | Msa0633670:intron | 40.0% | |
| TAAGCTACCACTTGAAGAAG+AGG | - | chr4_3:19387988-19388007 | Msa0633670:intron | 40.0% | |
| GATACATAGTTAGCTAGCAG+CGG | + | chr4_3:19388116-19388135 | None:intergenic | 40.0% | |
| ATCATATGTGTCATCTGTGG+TGG | + | chr4_3:19388166-19388185 | None:intergenic | 40.0% | |
| !! | CTGTTGGTTTAGCTATTGGT+TGG | - | chr4_3:19388346-19388365 | Msa0633670:CDS | 40.0% |
| TTCAGAATCATCTGTGTACG+GGG | - | chr4_3:19388502-19388521 | Msa0633670:CDS | 40.0% | |
| ACTGCTCTGTATCAATCAGT+TGG | - | chr4_3:19388562-19388581 | Msa0633670:intron | 40.0% | |
| GAAGGCTATACCAAAGAAGA+AGG | - | chr4_3:19388929-19388948 | Msa0633670:intron | 40.0% | |
| TGTTCCTGAAAAAGGAGAGA+AGG | - | chr4_3:19389063-19389082 | Msa0633670:exon | 40.0% | |
| ! | ACATACCAGAAGCTGACTTT+AGG | - | chr4_3:19389197-19389216 | Msa0633670:intron | 40.0% |
| ACAAAAATGTCGACATCGAG+CGG | - | chr4_3:19389377-19389396 | Msa0633670:intron | 40.0% | |
| !!! | ACTACTGATTTTTTGCCACC+CGG | - | chr4_3:19389490-19389509 | Msa0633670:intron | 40.0% |
| TGGGACTAAAATCCAAGCTT+CGG | + | chr4_3:19389532-19389551 | None:intergenic | 40.0% | |
| ! | GATGTTGGTGAAGAAATGGA+TGG | - | chr4_3:19389625-19389644 | Msa0633670:intron | 40.0% |
| AGAAATGGATGGGATTACTC+CGG | - | chr4_3:19389636-19389655 | Msa0633670:intron | 40.0% | |
| TGGGATTACTCCGGTATTAT+TGG | - | chr4_3:19389645-19389664 | Msa0633670:intron | 40.0% | |
| AAAACTTCTGCTTGAGTAGG+AGG | + | chr4_3:19389806-19389825 | None:intergenic | 40.0% | |
| CGTAAATTCTGGTCAGTCTT+CGG | - | chr4_3:19389996-19390015 | Msa0633670:intron | 40.0% | |
| ! | GAAGCATTCCGAACTATCTT+CGG | - | chr4_3:19390021-19390040 | Msa0633670:intron | 40.0% |
| !! | AAGGTGTTGTAACTCTTCCA+TGG | + | chr4_3:19390074-19390093 | None:intergenic | 40.0% |
| TAGTAAAGAGATGGCAGCAA+TGG | - | chr4_3:19390215-19390234 | Msa0633670:intron | 40.0% | |
| GCAATTCAGACCAAGATATG+GGG | - | chr4_3:19390280-19390299 | Msa0633670:intron | 40.0% | |
| CAATTCAGACCAAGATATGG+GGG | - | chr4_3:19390281-19390300 | Msa0633670:intron | 40.0% | |
| ACCCCAAATGACCACAATAA+TGG | - | chr4_3:19390324-19390343 | Msa0633670:intron | 40.0% | |
| CCCATTATTGTGGTCATTTG+GGG | + | chr4_3:19390328-19390347 | None:intergenic | 40.0% | |
| CCCCAAATGACCACAATAAT+GGG | - | chr4_3:19390325-19390344 | Msa0633670:intron | 40.0% | |
| GCCCATTATTGTGGTCATTT+GGG | + | chr4_3:19390329-19390348 | None:intergenic | 40.0% | |
| AGCCCATTATTGTGGTCATT+TGG | + | chr4_3:19390330-19390349 | None:intergenic | 40.0% | |
| CCTCATCATTATTTAGGCCA+TGG | + | chr4_3:19390371-19390390 | None:intergenic | 40.0% | |
| CCATGGCCTAAATAATGATG+AGG | - | chr4_3:19390368-19390387 | Msa0633670:intron | 40.0% | |
| ! | TGACTTGGAAGATGACAATG+AGG | - | chr4_3:19390645-19390664 | Msa0633670:intron | 40.0% |
| CTTCCCAGTCATGAAAAGAT+TGG | + | chr4_3:19390741-19390760 | None:intergenic | 40.0% | |
| ! | TCAGATTGACTCATCAATGC+TGG | - | chr4_3:19390775-19390794 | Msa0633670:intron | 40.0% |
| AATCGGTGGAGAAAATGTGG+AGG | + | chr4_3:19382397-19382416 | None:intergenic | 45.0% | |
| GGCAATGTGAAAATTGGAGG+AGG | + | chr4_3:19382571-19382590 | None:intergenic | 45.0% | |
| CTGGGCAATGTGAAAATTGG+AGG | + | chr4_3:19382574-19382593 | None:intergenic | 45.0% | |
| ! | GGTCAAGAGGTGCAAAAACT+GGG | + | chr4_3:19382592-19382611 | None:intergenic | 45.0% |
| ! | TGGTCAAGAGGTGCAAAAAC+TGG | + | chr4_3:19382593-19382612 | None:intergenic | 45.0% |
| GCAATGGCACTATTGCGTAA+TGG | + | chr4_3:19382757-19382776 | None:intergenic | 45.0% | |
| TGGAAGCTATAGTGTCGCAA+TGG | + | chr4_3:19382773-19382792 | None:intergenic | 45.0% | |
| ATAGCTGGACTGTTCTGTGA+CGG | + | chr4_3:19382820-19382839 | None:intergenic | 45.0% | |
| AGAGATGCCGTGTTTGAACA+CGG | - | chr4_3:19383350-19383369 | Msa0633670:CDS | 45.0% | |
| TGGTTACCCGTGTTCAAACA+CGG | + | chr4_3:19383360-19383379 | None:intergenic | 45.0% | |
| !! | AAAGCCGAGATTTGTTAGGC+AGG | + | chr4_3:19383393-19383412 | None:intergenic | 45.0% |
| ! | TGGCAAAGCCGAGATTTGTT+AGG | + | chr4_3:19383397-19383416 | None:intergenic | 45.0% |
| ! | AGCTAGCTCTTACGGACAAA+TGG | - | chr4_3:19383421-19383440 | Msa0633670:CDS | 45.0% |
| AAAAGTGGCTGGGATCAGTA+TGG | + | chr4_3:19383469-19383488 | None:intergenic | 45.0% | |
| ACATCGTGGCTTAGGGAATA+AGG | - | chr4_3:19383701-19383720 | Msa0633670:intron | 45.0% | |
| CATCGTGGCTTAGGGAATAA+GGG | - | chr4_3:19383702-19383721 | Msa0633670:intron | 45.0% | |
| TCACGGTTATACAAGCCTTG+TGG | + | chr4_3:19383949-19383968 | None:intergenic | 45.0% | |
| ! | GTGGAGTCTTCGGTAGTTTT+TGG | + | chr4_3:19384023-19384042 | None:intergenic | 45.0% |
| TCCTCTGCTTCAGTTGTTCT+TGG | - | chr4_3:19384077-19384096 | Msa0633670:CDS | 45.0% | |
| CGTAATATTACCAGCTGCAG+AGG | - | chr4_3:19384246-19384265 | Msa0633670:CDS | 45.0% | |
| GCCAAGAAAGAGAGAAACAG+TGG | + | chr4_3:19384623-19384642 | None:intergenic | 45.0% | |
| ACATCGGTGCACAACTCAAA+CGG | - | chr4_3:19384725-19384744 | Msa0633670:CDS | 45.0% | |
| ACTTACGGTTCTCCACTACA+AGG | + | chr4_3:19384760-19384779 | None:intergenic | 45.0% | |
| GCAGAGGACTTTGTAATGTC+TGG | + | chr4_3:19384952-19384971 | None:intergenic | 45.0% | |
| GGAAGATCAATCCAAGTTGC+AGG | - | chr4_3:19385168-19385187 | Msa0633670:intron | 45.0% | |
| AGCTGGAAGTTCAATCCAAG+TGG | - | chr4_3:19385314-19385333 | Msa0633670:intron | 45.0% | |
| !! | TATGGTATGGTGGTGGCAAA+TGG | + | chr4_3:19385519-19385538 | None:intergenic | 45.0% |
| CATGGTATGGTATGGTATGG+TGG | + | chr4_3:19385529-19385548 | None:intergenic | 45.0% | |
| !! | TATCTTATAGGGTGGTGGGA+TGG | + | chr4_3:19385561-19385580 | None:intergenic | 45.0% |
| TTCAACTGTAAAGTGGCCTC+TGG | - | chr4_3:19385646-19385665 | Msa0633670:intron | 45.0% | |
| TCAACTGTAAAGTGGCCTCT+GGG | - | chr4_3:19385647-19385666 | Msa0633670:intron | 45.0% | |
| ! | TCAAAACCTGGCTTGTGACT+TGG | - | chr4_3:19385773-19385792 | Msa0633670:intron | 45.0% |
| GTGTGCACGTTTGAAAATGG+AGG | - | chr4_3:19385910-19385929 | Msa0633670:intron | 45.0% | |
| TTAATCCACCTAGCAGAGAG+CGG | + | chr4_3:19386119-19386138 | None:intergenic | 45.0% | |
| ! | CACTGATGGAATCTTTGGAG+TGG | + | chr4_3:19386208-19386227 | None:intergenic | 45.0% |
| AGCGACACTGATGGAATCTT+TGG | + | chr4_3:19386213-19386232 | None:intergenic | 45.0% | |
| ACTAACGACCCTCCAATGAA+AGG | - | chr4_3:19386348-19386367 | Msa0633670:CDS | 45.0% | |
| TCTCCACTAGAAGGTAGCAT+GGG | + | chr4_3:19386871-19386890 | None:intergenic | 45.0% | |
| TTCTCCACTAGAAGGTAGCA+TGG | + | chr4_3:19386872-19386891 | None:intergenic | 45.0% | |
| AACACTGTTGCTCTAGCCAT+TGG | - | chr4_3:19386918-19386937 | Msa0633670:intron | 45.0% | |
| CCGTTGATCATGCTTGAGAA+TGG | + | chr4_3:19387197-19387216 | None:intergenic | 45.0% | |
| ! | CTTGCTGTGAAGTGGAACAT+TGG | + | chr4_3:19387222-19387241 | None:intergenic | 45.0% |
| CCGTTGTTCATGCATGAGAA+TGG | + | chr4_3:19387293-19387312 | None:intergenic | 45.0% | |
| CCTCAGATCATGCATGAGAA+TGG | + | chr4_3:19387389-19387408 | None:intergenic | 45.0% | |
| CCATTCTCATGCATGATCTG+AGG | - | chr4_3:19387386-19387405 | Msa0633670:intron | 45.0% | |
| AAGCAACAGTCATTGACAGC+TGG | - | chr4_3:19387409-19387428 | Msa0633670:intron | 45.0% | |
| AGCTGGAAGTTCAATCCAAG+TGG | - | chr4_3:19385314-19385333 | Msa0633670:intron | 45.0% | |
| CAAGAGGACCTTGTTGATCA+TGG | - | chr4_3:19387905-19387924 | Msa0633670:intron | 45.0% | |
| TGGAAGGTCCATGATCAACA+AGG | + | chr4_3:19387916-19387935 | None:intergenic | 45.0% | |
| !! | GTCATTGGTTGGCTTTCTGT+TGG | - | chr4_3:19388330-19388349 | Msa0633670:CDS | 45.0% |
| !! | GCTATTGGTTGGCTTTCTGT+TGG | - | chr4_3:19388357-19388376 | Msa0633670:CDS | 45.0% |
| !! | GCCGATTTGTATCCTTCAGT+TGG | - | chr4_3:19388450-19388469 | Msa0633670:CDS | 45.0% |
| GCAGACACATCGTTTGTACA+TGG | + | chr4_3:19388631-19388650 | None:intergenic | 45.0% | |
| ! | ACAGCCTTCTCTCCTTTTTC+AGG | + | chr4_3:19389070-19389089 | None:intergenic | 45.0% |
| AGTATGACAACTTGCGTGAG+CGG | - | chr4_3:19389155-19389174 | Msa0633670:intron | 45.0% | |
| CTTCTGGTATGTTGTCTGGA+CGG | + | chr4_3:19389189-19389208 | None:intergenic | 45.0% | |
| TCAGCTTCTGGTATGTTGTC+TGG | + | chr4_3:19389193-19389212 | None:intergenic | 45.0% | |
| CAAAAATGTCGACATCGAGC+GGG | - | chr4_3:19389378-19389397 | Msa0633670:intron | 45.0% | |
| !!! | CTACTGATTTTTTGCCACCC+GGG | - | chr4_3:19389491-19389510 | Msa0633670:intron | 45.0% |
| !!! | TACTGATTTTTTGCCACCCG+GGG | - | chr4_3:19389492-19389511 | Msa0633670:intron | 45.0% |
| CAGAATGTTCCCCTAGTAGT+TGG | + | chr4_3:19389606-19389625 | None:intergenic | 45.0% | |
| CTAGGGGAACATTCTGATGT+TGG | - | chr4_3:19389610-19389629 | Msa0633670:intron | 45.0% | |
| TAAAGAGATGGCAGCAATGG+AGG | - | chr4_3:19390218-19390237 | Msa0633670:intron | 45.0% | |
| AAAGAGATGGCAGCAATGGA+GGG | - | chr4_3:19390219-19390238 | Msa0633670:intron | 45.0% | |
| AGACCAAGATATGGGGGATT+TGG | - | chr4_3:19390287-19390306 | Msa0633670:intron | 45.0% | |
| CATTCATCTACATCTGCCCA+TGG | - | chr4_3:19390351-19390370 | Msa0633670:intron | 45.0% | |
| GGCCTACATTCATTACCATG+AGG | - | chr4_3:19390420-19390439 | Msa0633670:intron | 45.0% | |
| AGGGTGACCAATATTCCTCA+TGG | + | chr4_3:19390438-19390457 | None:intergenic | 45.0% | |
| CAAGGCCATGATTTACCTAC+AGG | + | chr4_3:19390573-19390592 | None:intergenic | 45.0% | |
| AGAGGTCAGTGAAGAATCGG+TGG | + | chr4_3:19382411-19382430 | None:intergenic | 50.0% | |
| ATGCACGTCAATCCGTCTAC+CGG | + | chr4_3:19383296-19383315 | None:intergenic | 50.0% | |
| GAGATGCCGTGTTTGAACAC+GGG | - | chr4_3:19383351-19383370 | Msa0633670:CDS | 50.0% | |
| ! | GCCAGTTGAGCTAGCTCTTA+CGG | - | chr4_3:19383413-19383432 | Msa0633670:CDS | 50.0% |
| TCCGTAAGAGCTAGCTCAAC+TGG | + | chr4_3:19383417-19383436 | None:intergenic | 50.0% | |
| GCCAAGAACAACTGAAGCAG+AGG | + | chr4_3:19384081-19384100 | None:intergenic | 50.0% | |
| ATTACCAGCTGCAGAGGTGA+TGG | - | chr4_3:19384252-19384271 | Msa0633670:CDS | 50.0% | |
| ATTACCATCACCTCTGCAGC+TGG | + | chr4_3:19384259-19384278 | None:intergenic | 50.0% | |
| TCTCCACTACAAGGTGGCAT+GGG | + | chr4_3:19384751-19384770 | None:intergenic | 50.0% | |
| TTCTCCACTACAAGGTGGCA+TGG | + | chr4_3:19384752-19384771 | None:intergenic | 50.0% | |
| TACGGTTCTCCACTACAAGG+TGG | + | chr4_3:19384757-19384776 | None:intergenic | 50.0% | |
| GGAAGTTCAATCCAAGTGGC+AGG | - | chr4_3:19385318-19385337 | Msa0633670:intron | 50.0% | |
| AAAAAGCAAGATCGCAGGCC+AGG | - | chr4_3:19385360-19385379 | Msa0633670:intron | 50.0% | |
| GGTATGGTATGGTATGGTGG+TGG | + | chr4_3:19385526-19385545 | None:intergenic | 50.0% | |
| GTGGGATGGAGAAACTAGCA+TGG | + | chr4_3:19385547-19385566 | None:intergenic | 50.0% | |
| GGAAGTTCAATCCAAGTGGC+AGG | - | chr4_3:19385318-19385337 | Msa0633670:intron | 50.0% | |
| TTTGAGCAGATCCTGCCACT+TGG | + | chr4_3:19387444-19387463 | None:intergenic | 50.0% | |
| !!! | AGAGGCCAGGTTTTGAACCA+TGG | + | chr4_3:19387566-19387585 | None:intergenic | 50.0% |
| TCAAAACCTGGCCTCTGACT+TGG | - | chr4_3:19387570-19387589 | Msa0633670:intron | 50.0% | |
| GGGCTCCCCTTCTTCATTTA+AGG | + | chr4_3:19388814-19388833 | None:intergenic | 50.0% | |
| AATGAAGAAGGGGAGCCCAT+TGG | - | chr4_3:19388816-19388835 | Msa0633670:intron | 50.0% | |
| AGCTTCACAAGACCGAAGCT+TGG | - | chr4_3:19389517-19389536 | Msa0633670:intron | 50.0% | |
| AACCACCAGCTCCAACTACT+AGG | - | chr4_3:19389592-19389611 | Msa0633670:intron | 50.0% | |
| ACCACCAGCTCCAACTACTA+GGG | - | chr4_3:19389593-19389612 | Msa0633670:intron | 50.0% | |
| GCAAGCTTCACTGAGGTTGT+TGG | + | chr4_3:19389680-19389699 | None:intergenic | 50.0% | |
| ATTCAGGGCAAGCTTCACTG+AGG | + | chr4_3:19389687-19389706 | None:intergenic | 50.0% | |
| CTATGTGTAGCGTGCAACCA+AGG | - | chr4_3:19389769-19389788 | Msa0633670:intron | 50.0% | |
| AGGAGGCTCACAATCATCCT+TGG | + | chr4_3:19389789-19389808 | None:intergenic | 50.0% | |
| AAGAGATGGCAGCAATGGAG+GGG | - | chr4_3:19390220-19390239 | Msa0633670:intron | 50.0% | |
| CTGCCAAATCCCCCATATCT+TGG | + | chr4_3:19390293-19390312 | None:intergenic | 50.0% | |
| ! | GAAAAGGAGGCACGCGACTT+GGG | - | chr4_3:19384437-19384456 | Msa0633670:intron | 55.0% |
| ! | AAAAGGAGGCACGCGACTTG+GGG | - | chr4_3:19384438-19384457 | Msa0633670:intron | 55.0% |
| TTTGCGCAGATCCTGCCACT+TGG | + | chr4_3:19385332-19385351 | None:intergenic | 55.0% | |
| CCTAGTCCAAGTCACAAGCC+AGG | + | chr4_3:19385782-19385801 | None:intergenic | 55.0% | |
| ! | CCTGGCTTGTGACTTGGACT+AGG | - | chr4_3:19385779-19385798 | Msa0633670:intron | 55.0% |
| CTTAGTCCAAGTCAGAGGCC+AGG | + | chr4_3:19387579-19387598 | None:intergenic | 55.0% | |
| !! | GCAGCGGTGTTACCTTCCAT+TGG | + | chr4_3:19388100-19388119 | None:intergenic | 55.0% |
| CCACCAGCTCCAACTACTAG+GGG | - | chr4_3:19389594-19389613 | Msa0633670:intron | 55.0% | |
| GTTCCCCTAGTAGTTGGAGC+TGG | + | chr4_3:19389600-19389619 | None:intergenic | 55.0% | |
| ! | GGAAAAGGAGGCACGCGACT+TGG | - | chr4_3:19384436-19384455 | Msa0633670:intron | 60.0% |
| ! | AAAGGAGGCACGCGACTTGG+GGG | - | chr4_3:19384439-19384458 | Msa0633670:intron | 60.0% |
| CGGCCCATGCTACCTTCTAG+TGG | - | chr4_3:19386865-19386884 | Msa0633670:intron | 60.0% | |
| GTAGGCCGGTCTCAGTTCGT+TGG | - | chr4_3:19387857-19387876 | Msa0633670:intron | 60.0% | |
| ! | GGTCTTGTGAAGCTTGCCCC+GGG | + | chr4_3:19389511-19389530 | None:intergenic | 60.0% |
| ! | CGGTCTTGTGAAGCTTGCCC+CGG | + | chr4_3:19389512-19389531 | None:intergenic | 60.0% |
| CCCCTAGTAGTTGGAGCTGG+TGG | + | chr4_3:19389597-19389616 | None:intergenic | 60.0% | |
| CGGCCCATGCCACCTTGTAG+TGG | - | chr4_3:19384745-19384764 | Msa0633670:CDS | 65.0% | |
| CAGAGAGCGGCCCGCTACTT+TGG | + | chr4_3:19386106-19386125 | None:intergenic | 65.0% | |
| CTTGTGAAGCTTGCCCCGGG+TGG | + | chr4_3:19389508-19389527 | None:intergenic | 65.0% | |
| CCATGGCAGCGCACTCTTCC+AGG | + | chr4_3:19390057-19390076 | None:intergenic | 65.0% | |
| ! | CCTGGAAGAGTGCGCTGCCA+TGG | - | chr4_3:19390054-19390073 | Msa0633670:intron | 65.0% |
| !! | GTAGCGGGCCGCTCTCTGCT+AGG | - | chr4_3:19386108-19386127 | Msa0633670:CDS | 70.0% |
| GCGGGCCGCTCTCTGCTAGG+TGG | - | chr4_3:19386111-19386130 | Msa0633670:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 19382310 | 19391180 | 19382310 | ID=Msa0633670;Name=Msa0633670 |
| chr4_3 | mRNA | 19382310 | 19391180 | 19382310 | ID=Msa0633670-mRNA-1;Parent=Msa0633670;Name=Msa0633670-mRNA-1;_AED=0.04;_eAED=0.04;_QI=169|0.85|0.73|0.93|0.92|0.86|15|397|993 |
| chr4_3 | exon | 19382310 | 19382913 | 19382310 | ID=Msa0633670-mRNA-1:exon:5324;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19383101 | 19383514 | 19383101 | ID=Msa0633670-mRNA-1:exon:5323;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19383604 | 19383711 | 19383604 | ID=Msa0633670-mRNA-1:exon:5322;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19384056 | 19384148 | 19384056 | ID=Msa0633670-mRNA-1:exon:5321;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19384235 | 19384438 | 19384235 | ID=Msa0633670-mRNA-1:exon:5320;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19384516 | 19384769 | 19384516 | ID=Msa0633670-mRNA-1:exon:5319;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19385112 | 19385159 | 19385112 | ID=Msa0633670-mRNA-1:exon:5318;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19385384 | 19385629 | 19385384 | ID=Msa0633670-mRNA-1:exon:5317;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19385997 | 19386436 | 19385997 | ID=Msa0633670-mRNA-1:exon:5316;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19386597 | 19386672 | 19386597 | ID=Msa0633670-mRNA-1:exon:5315;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19387121 | 19387381 | 19387121 | ID=Msa0633670-mRNA-1:exon:5314;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19388109 | 19388554 | 19388109 | ID=Msa0633670-mRNA-1:exon:5313;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19388717 | 19388792 | 19388717 | ID=Msa0633670-mRNA-1:exon:5312;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19388961 | 19389086 | 19388961 | ID=Msa0633670-mRNA-1:exon:5311;Parent=Msa0633670-mRNA-1 |
| chr4_3 | exon | 19391029 | 19391180 | 19391029 | ID=Msa0633670-mRNA-1:exon:5310;Parent=Msa0633670-mRNA-1 |
| chr4_3 | five_prime_UTR | 19391029 | 19391180 | 19391029 | ID=Msa0633670-mRNA-1:five_prime_utr;Parent=Msa0633670-mRNA-1 |
| chr4_3 | five_prime_UTR | 19389070 | 19389086 | 19389070 | ID=Msa0633670-mRNA-1:five_prime_utr;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19388961 | 19389069 | 19388961 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19388717 | 19388792 | 19388717 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19388109 | 19388554 | 19388109 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19387121 | 19387381 | 19387121 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19386597 | 19386672 | 19386597 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19385997 | 19386436 | 19385997 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19385384 | 19385629 | 19385384 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19385112 | 19385159 | 19385112 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19384516 | 19384769 | 19384516 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19384235 | 19384438 | 19384235 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19384056 | 19384148 | 19384056 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19383604 | 19383711 | 19383604 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19383101 | 19383514 | 19383101 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | CDS | 19382707 | 19382913 | 19382707 | ID=Msa0633670-mRNA-1:cds;Parent=Msa0633670-mRNA-1 |
| chr4_3 | three_prime_UTR | 19382310 | 19382706 | 19382310 | ID=Msa0633670-mRNA-1:three_prime_utr;Parent=Msa0633670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
