AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0593650


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0593650 MtrunA17_Chr4g0011741 96.029 554 22 0 1 554 426 979 0.0 1077
Msa0593650 MtrunA17_Chr4g0011741 71.970 132 30 4 3 128 168 298 5.48e-41 159
Msa0593650 MtrunA17_Chr6g0472201 52.593 405 166 6 112 505 29 418 1.01e-143 421
Msa0593650 MtrunA17_Chr3g0096851 56.967 244 97 2 112 350 29 269 1.38e-97 297
Msa0593650 MtrunA17_Chr7g0226581 69.378 209 56 2 272 480 1 201 3.51e-93 286
Msa0593650 MtrunA17_Chr5g0409781 77.519 129 29 0 184 312 47 175 1.93e-68 218
Msa0593650 MtrunA17_Chr2g0306531 41.270 189 89 5 298 480 2 174 3.39e-32 123
Msa0593650 MtrunA17_Chr2g0306521 46.316 95 50 1 135 228 236 330 2.24e-23 101
Msa0593650 MtrunA17_Chr2g0305311 24.625 333 209 10 169 489 183 485 2.63e-14 75.5
Msa0593650 MtrunA17_Chr7g0226591 44.928 138 55 7 21 144 70 200 4.19e-14 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0593650 AT1G40087.1 27.037 270 171 9 170 417 73 338 2.85e-19 90.5
Msa0593650 AT3G30200.1 26.667 270 176 8 166 417 193 458 3.44e-19 91.3

Find 116 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGCTCCCCTTCTTCATTTA+AGG 0.093712 4_2:+19980172 None:intergenic
ATGAATCACAAAGGTGATTT+TGG 0.128311 4_2:-19977927 Msa0593650:three_prime_UTR
CATTGATGATTTCAGGAAAT+TGG 0.204677 4_2:-19979656 Msa0593650:intron
GTCCTCTTACTTACACTAAT+TGG 0.212199 4_2:-19980076 Msa0593650:CDS
CATATATTCTCCTTCTTCTT+TGG 0.215996 4_2:+19980044 None:intergenic
TAGGAAATTAATGATTTATT+GGG 0.227619 4_2:-19979767 Msa0593650:CDS
CCATGGCAGCGCACTCTTCC+AGG 0.230720 4_2:+19978928 None:intergenic
AAAACTTACAATTGTGTTAC+TGG 0.234856 4_2:+19979107 None:intergenic
GCCCATTATTGTGGTCATTT+GGG 0.242734 4_2:+19978656 None:intergenic
TTAGGAAATTAATGATTTAT+TGG 0.243216 4_2:-19979768 Msa0593650:CDS
CCTTATGATAGCAAAGCTTA+TGG 0.259101 4_2:+19979580 None:intergenic
AGCCCATTATTGTGGTCATT+TGG 0.275452 4_2:+19978655 None:intergenic
TTGAAAAGAAGTAAAGAAAT+TGG 0.277839 4_2:-19978883 Msa0593650:CDS
AGATACATTGTTCCTGAAAA+AGG 0.278882 4_2:-19979928 Msa0593650:CDS
GGAAATTGCAAGTTCTTCTA+AGG 0.286199 4_2:-19978741 Msa0593650:CDS
ACCTTATTCCTTTCTACTTT+GGG 0.287126 4_2:-19978146 Msa0593650:three_prime_UTR
CAAAGAAGAAGGAGAATATA+TGG 0.298681 4_2:-19980043 Msa0593650:CDS
TATGAATACTTTGCTATTGT+TGG 0.311756 4_2:-19977876 Msa0593650:three_prime_UTR
TGTGATTCATATCAACAATA+TGG 0.315009 4_2:+19977940 None:intergenic
ACCCCAAATGACCACAATAA+TGG 0.333226 4_2:-19978658 Msa0593650:CDS
ACCTTCCATTGGATTGTCAT+TGG 0.333646 4_2:+19980831 None:intergenic
AACCTTATTCCTTTCTACTT+TGG 0.336363 4_2:-19978147 Msa0593650:three_prime_UTR
CAATTGTGTTACTGGTAACT+TGG 0.347417 4_2:+19979115 None:intergenic
CAAGATTTGATCGTAAATTC+TGG 0.349141 4_2:-19978997 Msa0593650:CDS
TATCTTGGTCTGAATTGCTT+TGG 0.356836 4_2:+19978707 None:intergenic
AATTTCCTAAAGTCTGCTTC+TGG 0.359358 4_2:+19979781 None:intergenic
CCCCAAATGACCACAATAAT+GGG 0.360164 4_2:-19978657 Msa0593650:CDS
CAAGAGGACCTTGTTGATCA+TGG 0.361988 4_2:-19981012 Msa0593650:CDS
AACATACCTCATCATTATTT+AGG 0.362058 4_2:+19978608 None:intergenic
CTTATGATAGCAAAGCTTAT+GGG 0.385281 4_2:+19979581 None:intergenic
ACCCAAAGTAGAAAGGAATA+AGG 0.386576 4_2:+19978145 None:intergenic
AAGCAATTCAGACCAAGATA+TGG 0.396175 4_2:-19978704 Msa0593650:CDS
CGTAAATTCTGGTCAGTCTT+CGG 0.402447 4_2:-19978986 Msa0593650:CDS
CCATAAGCTTTGCTATCATA+AGG 0.406969 4_2:-19979580 Msa0593650:CDS
ACATACCAGAAGCAGACTTT+AGG 0.407882 4_2:-19979786 Msa0593650:CDS
ATTAACTCTGAAAGTGATAA+TGG 0.409576 4_2:-19980901 Msa0593650:CDS
TCAAAGATTGTTGTTTCCTC+AGG 0.411003 4_2:+19982110 None:intergenic
AAGTGACAAGATTCAAGAAA+TGG 0.411534 4_2:-19978821 Msa0593650:CDS
CTTCCCAGTCATGAAAAGAT+TGG 0.424153 4_2:+19978243 None:intergenic
CATCAGACAATTGTTCTTCA+AGG 0.426301 4_2:+19978393 None:intergenic
TAATCATCAAGTGACATTGA+TGG 0.431600 4_2:+19980964 None:intergenic
TTTATCCTGTAGGTAAATCA+TGG 0.432016 4_2:-19978416 Msa0593650:intron
AACTCGACAACGATGTCGTT+TGG 0.435571 4_2:-19978017 Msa0593650:three_prime_UTR
TCTGCTTCTGGTATGTTGTC+TGG 0.448187 4_2:+19979793 None:intergenic
GAAGCATTTCGAACTATCTT+CGG 0.449754 4_2:-19978961 Msa0593650:CDS
TTCCAATTAGTGTAAGTAAG+AGG 0.461637 4_2:+19980074 None:intergenic
GAAATCACCTTAAATGAAGA+AGG 0.461651 4_2:-19980179 Msa0593650:CDS
CCCATTATTGTGGTCATTTG+GGG 0.468524 4_2:+19978657 None:intergenic
CCTGGAAGAGTGCGCTGCCA+TGG 0.474546 4_2:-19978928 Msa0593650:CDS
AGCAATTCAGACCAAGATAT+GGG 0.476590 4_2:-19978703 Msa0593650:CDS
ATGCTATAATAAATGATGCT+TGG 0.483767 4_2:-19979891 Msa0593650:CDS
CTCATCATTATTTAGGCCAT+GGG 0.484311 4_2:+19978615 None:intergenic
CCTCATCATTATTTAGGCCA+TGG 0.484321 4_2:+19978614 None:intergenic
CCTCAGGTCATGCATGAGAA+TGG 0.488919 4_2:+19982126 None:intergenic
GGAGGTAAAACATGAAAAGA+TGG 0.490515 4_2:-19978800 Msa0593650:CDS
TCATCTTCCACATCATCAAA+AGG 0.498348 4_2:+19978344 None:intergenic
GTAGGGGTGTTACCTTCCAT+TGG 0.499221 4_2:+19980820 None:intergenic
TCATCTCCAAAGTCATCAAA+AGG 0.502212 4_2:+19978308 None:intergenic
AGATCAACCTTCCGACGACT+TGG 0.507581 4_2:-19978282 Msa0593650:CDS
ATTATCAACCCAAAGTAGAA+AGG 0.508060 4_2:+19978138 None:intergenic
GTGGGCCGGTCTCAGTTCGT+TGG 0.511416 4_2:-19981060 Msa0593650:CDS
TTTGAGCAGATCCTGCCACT+TGG 0.512670 4_2:+19982071 None:intergenic
AAAGAAGAAGGAGAATATAT+GGG 0.517336 4_2:-19980042 Msa0593650:CDS
AAACGACATCGTTGTCGAGT+TGG 0.520205 4_2:+19978019 None:intergenic
TTAAATTTATCTTACTTGAA+CGG 0.522475 4_2:+19979735 None:intergenic
AAACAACAATCTTTGACAGC+TGG 0.523878 4_2:-19982103 Msa0593650:CDS
ATTTCTTCTCTTTCAGCAAG+TGG 0.528393 4_2:+19980197 None:intergenic
ATCATCTTCTTCCAAGTCGT+CGG 0.530377 4_2:+19978271 None:intergenic
AAAACTTCAGCTTGAGTAGG+AGG 0.531759 4_2:+19979177 None:intergenic
GAAACACGACAAAGTAAGAA+AGG 0.532579 4_2:-19979150 Msa0593650:CDS
AAAGAGATGGCAGCAATGGA+GGG 0.533542 4_2:-19978763 Msa0593650:CDS
CATAAGCTTTGCTATCATAA+GGG 0.534866 4_2:-19979579 Msa0593650:CDS
TAAAAGAGAAGCTAATATCA+TGG 0.537021 4_2:-19978063 Msa0593650:three_prime_UTR
AGTGATAATGGTGATGTTGA+GGG 0.539299 4_2:-19980889 Msa0593650:CDS
GGAAGTTCAAGCCAAGTGGC+AGG 0.540366 4_2:-19982082 Msa0593650:CDS
AGGAAATTAATGATTTATTG+GGG 0.540538 4_2:-19979766 Msa0593650:CDS
AGGAGGCTCACAATCATCCT+TGG 0.544300 4_2:+19979194 None:intergenic
GAAGGCTATACCAAAGAAGA+AGG 0.545383 4_2:-19980054 Msa0593650:CDS
TAAAGAGATGGCAGCAATGG+AGG 0.548073 4_2:-19978764 Msa0593650:CDS
TAGTAAAGAGATGGCAGCAA+TGG 0.550552 4_2:-19978767 Msa0593650:CDS
TCAGATTGACTCATCAATGC+TGG 0.550681 4_2:-19978206 Msa0593650:exon
TCTTACTTACACTAATTGGA+AGG 0.551758 4_2:-19980072 Msa0593650:CDS
AATTCAGAAAACAGCGATGA+GGG 0.552902 4_2:-19982170 Msa0593650:exon
TTAATCCAACGAACTGAGAC+CGG 0.557213 4_2:+19981055 None:intergenic
AACCTACCACTTGAAGTTGA+GGG 0.558153 4_2:-19980928 Msa0593650:CDS
AATGAAGAAGGGGAGCCCAT+TGG 0.560442 4_2:-19980167 Msa0593650:CDS
CTTCTGGTATGTTGTCTGGA+CGG 0.561123 4_2:+19979797 None:intergenic
AAATCACCTTAAATGAAGAA+GGG 0.563337 4_2:-19980178 Msa0593650:CDS
TAACCTACCACTTGAAGTTG+AGG 0.568282 4_2:-19980929 Msa0593650:CDS
AGTATGACAACTTGCGTGAG+CGG 0.575926 4_2:-19979828 Msa0593650:CDS
AAGTGATAATGGTGATGTTG+AGG 0.576279 4_2:-19980890 Msa0593650:CDS
TCTTCTTCCAAGTCGTCGGA+AGG 0.579113 4_2:+19978275 None:intergenic
ACCAATGACAATCCAATGGA+AGG 0.580607 4_2:-19980832 Msa0593650:intron
ATAAACTATGAAAATGATGA+TGG 0.581271 4_2:-19980862 Msa0593650:CDS
CAGTTCTGCTCAATTTCAAG+AGG 0.584026 4_2:-19981028 Msa0593650:CDS
GAAAACCAATGACAATCCAA+TGG 0.589221 4_2:-19980836 Msa0593650:CDS
ATATCACCCTCAACTTCAAG+TGG 0.599635 4_2:+19980922 None:intergenic
AATCACCTTAAATGAAGAAG+GGG 0.602115 4_2:-19980177 Msa0593650:CDS
TAATAAATGATGCTTGGAGA+CGG 0.606235 4_2:-19979885 Msa0593650:CDS
AAGGTGTTGTAACTCTTCCA+TGG 0.608703 4_2:+19978911 None:intergenic
ATGAATGTAGCCCATTATTG+TGG 0.611135 4_2:+19978647 None:intergenic
TGACAAGATTCAAGAAATGG+AGG 0.626506 4_2:-19978818 Msa0593650:CDS
GCAATTCAGACCAAGATATG+GGG 0.632072 4_2:-19978702 Msa0593650:CDS
CATTCATCTACATCTGCCCA+TGG 0.633478 4_2:-19978631 Msa0593650:CDS
TATGCTCGAGAATTCATGAT+CGG 0.640321 4_2:-19980220 Msa0593650:CDS
CCATGGCCTAAATAATGATG+AGG 0.641883 4_2:-19978614 Msa0593650:intron
CACCCTCAACTTCAAGTGGT+AGG 0.642167 4_2:+19980926 None:intergenic
AGCTGGAAGTTCAAGCCAAG+TGG 0.642871 4_2:-19982086 Msa0593650:CDS
AAATTCAGAAAACAGCGATG+AGG 0.652388 4_2:-19982171 Msa0593650:exon
TGGAAGGTCCATGATCAACA+AGG 0.654556 4_2:+19981004 None:intergenic
CAATTCAGACCAAGATATGG+GGG 0.664719 4_2:-19978701 Msa0593650:CDS
CCATTCTCATGCATGACCTG+AGG 0.667212 4_2:-19982126 Msa0593650:CDS
ATTGTTGATATGAATCACAA+AGG 0.671943 4_2:-19977936 Msa0593650:three_prime_UTR
CTATGTGTAGCGTGCAACCA+AGG 0.673476 4_2:-19979211 Msa0593650:intron
AAGAGATGGCAGCAATGGAG+GGG 0.675148 4_2:-19978762 Msa0593650:CDS
TTGATCATGGACCTTCCAAG+AGG 0.695593 4_2:-19980999 Msa0593650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGCTATTAAAATTAAGTA+GGG + chr4_2:19978575-19978594 None:intergenic 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + chr4_2:19978574-19978593 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + chr4_2:19978252-19978271 None:intergenic 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - chr4_2:19978574-19978593 Msa0593650:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - chr4_2:19978575-19978594 Msa0593650:intron 15.0%
!! TAAATAAATAGAATGAACAA+AGG + chr4_2:19979420-19979439 None:intergenic 15.0%
!! TTAGGAAATTAATGATTTAT+TGG - chr4_2:19980313-19980332 Msa0593650:intron 15.0%
!! TAGGAAATTAATGATTTATT+GGG - chr4_2:19980314-19980333 Msa0593650:intron 15.0%
!! TTAAATTTATCTTACTTGAA+CGG + chr4_2:19980349-19980368 None:intergenic 15.0%
!! ATTAAATTCTATTACAAGTA+TGG - chr4_2:19980563-19980582 Msa0593650:intron 15.0%
!! ATTACTTGTCCTTTATTATA+GGG - chr4_2:19978087-19978106 Msa0593650:three_prime_UTR 20.0%
!! CATAATTAACCCTATAATAA+AGG + chr4_2:19978099-19978118 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG - chr4_2:19978418-19978437 Msa0593650:intron 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - chr4_2:19978512-19978531 Msa0593650:intron 20.0%
!! AAACAAATTTGAATTGAGTA+GGG - chr4_2:19978513-19978532 Msa0593650:intron 20.0%
!! AAAGGAGCAAATATAATAAA+GGG + chr4_2:19978649-19978668 None:intergenic 20.0%
!!! TTTCACTTGTTTTATGTTTT+AGG - chr4_2:19978909-19978928 Msa0593650:CDS 20.0%
!!! TTCACTTGTTTTATGTTTTA+GGG - chr4_2:19978910-19978929 Msa0593650:CDS 20.0%
!! ATAAACTATGAAAATGATGA+TGG - chr4_2:19979219-19979238 Msa0593650:intron 20.0%
!!! ATTCTTTCTGTTTAAGTTAT+TGG - chr4_2:19979468-19979487 Msa0593650:intron 20.0%
!!! CATATATAACTTGTTGATAT+TGG - chr4_2:19979784-19979803 Msa0593650:CDS 20.0%
!! AGGAAATTAATGATTTATTG+GGG - chr4_2:19980315-19980334 Msa0593650:intron 20.0%
!! ATTTAATTATTCGTCATTCA+GGG + chr4_2:19980803-19980822 None:intergenic 20.0%
!! AATTTAATTATTCGTCATTC+AGG + chr4_2:19980804-19980823 None:intergenic 20.0%
!! TAATTAAATTCTACTGTTAG+TGG - chr4_2:19980814-19980833 Msa0593650:intron 20.0%
!! TTGAAAAGAAGTAAAGAAAT+TGG - chr4_2:19981198-19981217 Msa0593650:intron 20.0%
!! TTATTAGTAGCTAAAATACA+AGG - chr4_2:19981596-19981615 Msa0593650:intron 20.0%
!! AATTTTTGCTTGGTTTAAAG+TGG + chr4_2:19977895-19977914 None:intergenic 25.0%
! AATAAAGGACAAGTAATGAT+TGG + chr4_2:19978084-19978103 None:intergenic 25.0%
! CATTACTTGTCCTTTATTAT+AGG - chr4_2:19978086-19978105 Msa0593650:three_prime_UTR 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG + chr4_2:19978223-19978242 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG + chr4_2:19978224-19978243 None:intergenic 25.0%
! AGTGCAGAAAAACAAAATTA+GGG - chr4_2:19978546-19978565 Msa0593650:intron 25.0%
! GAAAGGAGCAAATATAATAA+AGG + chr4_2:19978650-19978669 None:intergenic 25.0%
! TGTTGAAAAATCAAACTAGT+GGG - chr4_2:19979003-19979022 Msa0593650:CDS 25.0%
!! ATTAACTCTGAAAGTGATAA+TGG - chr4_2:19979180-19979199 Msa0593650:CDS 25.0%
!! TTTCTGTTTAAGTTATTGGT+TGG - chr4_2:19979472-19979491 Msa0593650:intron 25.0%
! TTTCATTTGTACTTTCAGTT+AGG - chr4_2:19979516-19979535 Msa0593650:intron 25.0%
! TTCATTTGTACTTTCAGTTA+GGG - chr4_2:19979517-19979536 Msa0593650:intron 25.0%
! GATAGCATAAGAGATATATA+AGG + chr4_2:19979691-19979710 None:intergenic 25.0%
! TTGATATTGGAATGTATACT+AGG - chr4_2:19979797-19979816 Msa0593650:CDS 25.0%
! TAGGAGAAACATCAAAAAAA+AGG - chr4_2:19979816-19979835 Msa0593650:CDS 25.0%
! ACATCAAAAAAAAGGAAAAG+AGG - chr4_2:19979824-19979843 Msa0593650:CDS 25.0%
! AAATCACCTTAAATGAAGAA+GGG - chr4_2:19979903-19979922 Msa0593650:CDS 25.0%
!!! TTCTGAATTCAGCAATTTTT+TGG - chr4_2:19979955-19979974 Msa0593650:intron 25.0%
!!! TCTGAATTCAGCAATTTTTT+GGG - chr4_2:19979956-19979975 Msa0593650:intron 25.0%
! AAAGAAGAAGGAGAATATAT+GGG - chr4_2:19980039-19980058 Msa0593650:CDS 25.0%
! ATGCTATAATAAATGATGCT+TGG - chr4_2:19980190-19980209 Msa0593650:CDS 25.0%
! AATTATGAACACTTGTAGAA+TGG - chr4_2:19980670-19980689 Msa0593650:intron 25.0%
! AAAACTTACAATTGTGTTAC+TGG + chr4_2:19980977-19980996 None:intergenic 25.0%
!! TAAAAAAAAGCATGCTATTG+AGG - chr4_2:19981227-19981246 Msa0593650:intron 25.0%
! GAAAAAACATAGTAAAGAGA+TGG - chr4_2:19981305-19981324 Msa0593650:intron 25.0%
! AACATACCTCATCATTATTT+AGG + chr4_2:19981476-19981495 None:intergenic 25.0%
! TTCATTACCATAAGGAATAT+TGG - chr4_2:19981527-19981546 Msa0593650:intron 25.0%
!!! TCTTAGTATTTTTATCCTGT+AGG - chr4_2:19981655-19981674 Msa0593650:intron 25.0%
! TAAAAGAGAAGCTAATATCA+TGG - chr4_2:19982018-19982037 Msa0593650:intron 25.0%
!!! TAATATCATGGTGTGTTTTT+TGG - chr4_2:19982030-19982049 Msa0593650:intron 25.0%
! TGTGATTCATATCAACAATA+TGG + chr4_2:19982144-19982163 None:intergenic 25.0%
! ATTGTTGATATGAATCACAA+AGG - chr4_2:19982145-19982164 Msa0593650:CDS 25.0%
!!! TATGAATACTTTGCTATTGT+TGG - chr4_2:19982205-19982224 Msa0593650:five_prime_UTR 25.0%
! CTGTTTTCTGAATTTTTGCT+TGG + chr4_2:19977905-19977924 None:intergenic 30.0%
AACATAAAAAGCAAGATCAC+AGG - chr4_2:19978036-19978055 Msa0593650:three_prime_UTR 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr4_2:19978606-19978625 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr4_2:19978605-19978624 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG - chr4_2:19978286-19978305 Msa0593650:CDS 30.0%
CAGTGCAGAAAAACAAAATT+AGG - chr4_2:19978545-19978564 Msa0593650:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr4_2:19978605-19978624 Msa0593650:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr4_2:19978606-19978625 Msa0593650:intron 30.0%
TGTTAGTTAGTGCAACAAAA+TGG + chr4_2:19978805-19978824 None:intergenic 30.0%
GTGTTGAAAAATCAAACTAG+TGG - chr4_2:19979002-19979021 Msa0593650:CDS 30.0%
TAATCATCAAGTGACATTGA+TGG + chr4_2:19979120-19979139 None:intergenic 30.0%
TGAAACATAGTTGAGTAGTA+GGG + chr4_2:19979281-19979300 None:intergenic 30.0%
ATGAAACATAGTTGAGTAGT+AGG + chr4_2:19979282-19979301 None:intergenic 30.0%
CATATCATATGTGTCATATG+TGG + chr4_2:19979333-19979352 None:intergenic 30.0%
CAGAAAGAATGAACAACAAA+GGG + chr4_2:19979458-19979477 None:intergenic 30.0%
ACAGAAAGAATGAACAACAA+AGG + chr4_2:19979459-19979478 None:intergenic 30.0%
ACCAACTGAATGATACAAAT+GGG + chr4_2:19979580-19979599 None:intergenic 30.0%
AACCAACTGAATGATACAAA+TGG + chr4_2:19979581-19979600 None:intergenic 30.0%
! TTTTTCTGCTATCAATCAGT+TGG - chr4_2:19979660-19979679 Msa0593650:intron 30.0%
AAAAAAAGGAAAAGAGGAAG+AGG - chr4_2:19979830-19979849 Msa0593650:CDS 30.0%
GAAATCACCTTAAATGAAGA+AGG - chr4_2:19979902-19979921 Msa0593650:CDS 30.0%
AATCACCTTAAATGAAGAAG+GGG - chr4_2:19979904-19979923 Msa0593650:CDS 30.0%
!! TCAGAAACTATCTTTTGAGT+TGG + chr4_2:19979941-19979960 None:intergenic 30.0%
TTCCAATTAGTGTAAGTAAG+AGG + chr4_2:19980010-19980029 None:intergenic 30.0%
TCTTACTTACACTAATTGGA+AGG - chr4_2:19980009-19980028 Msa0593650:intron 30.0%
CATATATTCTCCTTCTTCTT+TGG + chr4_2:19980040-19980059 None:intergenic 30.0%
CAAAGAAGAAGGAGAATATA+TGG - chr4_2:19980038-19980057 Msa0593650:CDS 30.0%
AGATACATTGTTCCTGAAAA+AGG - chr4_2:19980153-19980172 Msa0593650:CDS 30.0%
TAATAAATGATGCTTGGAGA+CGG - chr4_2:19980196-19980215 Msa0593650:CDS 30.0%
! CATTGATGATTTCAGGAAAT+TGG - chr4_2:19980425-19980444 Msa0593650:intron 30.0%
CTTATGATAGCAAAGCTTAT+GGG + chr4_2:19980503-19980522 None:intergenic 30.0%
! CATAAGCTTTGCTATCATAA+GGG - chr4_2:19980502-19980521 Msa0593650:intron 30.0%
GATTTAAGTGCCAATAATAC+TGG + chr4_2:19980759-19980778 None:intergenic 30.0%
ATAAAAACTTCAGCTTGAGT+AGG + chr4_2:19980910-19980929 None:intergenic 30.0%
CAAGATTTGATCGTAAATTC+TGG - chr4_2:19981084-19981103 Msa0593650:intron 30.0%
!! TTACTTCTTTTCAAGAGAGA+AGG + chr4_2:19981192-19981211 None:intergenic 30.0%
AAGTGACAAGATTCAAGAAA+TGG - chr4_2:19981260-19981279 Msa0593650:intron 30.0%
CCATTATTGTTGCAACTATA+AGG + chr4_2:19981501-19981520 None:intergenic 30.0%
CCTTATAGTTGCAACAATAA+TGG - chr4_2:19981498-19981517 Msa0593650:intron 30.0%
! TTCCTTATGGTAATGAATGT+AGG + chr4_2:19981524-19981543 None:intergenic 30.0%
!!! AATGTTTTAGCTCTCAATGA+GGG + chr4_2:19981556-19981575 None:intergenic 30.0%
!!! TAATGTTTTAGCTCTCAATG+AGG + chr4_2:19981557-19981576 None:intergenic 30.0%
TTTATCCTGTAGGTAAATCA+TGG - chr4_2:19981665-19981684 Msa0593650:intron 30.0%
AACCTTATTCCTTTCTACTT+TGG - chr4_2:19981934-19981953 Msa0593650:intron 30.0%
ACCTTATTCCTTTCTACTTT+GGG - chr4_2:19981935-19981954 Msa0593650:intron 30.0%
ATTATCAACCCAAAGTAGAA+AGG + chr4_2:19981946-19981965 None:intergenic 30.0%
! TACATCGAGCTTCTTTTTAT+AGG - chr4_2:19981978-19981997 Msa0593650:intron 30.0%
! ATGAATCACAAAGGTGATTT+TGG - chr4_2:19982154-19982173 Msa0593650:CDS 30.0%
AAATTCAGAAAACAGCGATG+AGG - chr4_2:19977910-19977929 Msa0593650:three_prime_UTR 35.0%
AATTCAGAAAACAGCGATGA+GGG - chr4_2:19977911-19977930 Msa0593650:three_prime_UTR 35.0%
!! TCAAAGATTGTTGTTTCCTC+AGG + chr4_2:19977974-19977993 None:intergenic 35.0%
AAACAACAATCTTTGACAGC+TGG - chr4_2:19977978-19977997 Msa0593650:three_prime_UTR 35.0%
TAATGATTGGCAAAGCATGT+TGG + chr4_2:19978071-19978090 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG + chr4_2:19978590-19978609 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr4_2:19978590-19978609 Msa0593650:intron 35.0%
ATGAAGATTGCAGTGATGAA+AGG + chr4_2:19978667-19978686 None:intergenic 35.0%
AAAAAAGTAGCAGCCAACAA+TGG + chr4_2:19978698-19978717 None:intergenic 35.0%
GTTGAGTACTATTACTACCA+TGG - chr4_2:19978721-19978740 Msa0593650:CDS 35.0%
GTTAGTGCAACAAAATGGTT+AGG + chr4_2:19978800-19978819 None:intergenic 35.0%
!! AAGTGATAATGGTGATGTTG+AGG - chr4_2:19979191-19979210 Msa0593650:CDS 35.0%
!! AGTGATAATGGTGATGTTGA+GGG - chr4_2:19979192-19979211 Msa0593650:CDS 35.0%
GAAAACCAATGACAATCCAA+TGG - chr4_2:19979245-19979264 Msa0593650:intron 35.0%
GAAACATAGTTGAGTAGTAG+GGG + chr4_2:19979280-19979299 None:intergenic 35.0%
ATCATATGTGTCATATGTGG+TGG + chr4_2:19979330-19979349 None:intergenic 35.0%
!!! CTCCTTGTTTTTGAATGCTT+TGG - chr4_2:19979391-19979410 Msa0593650:intron 35.0%
! CACCAAAGCATTCAAAAACA+AGG + chr4_2:19979396-19979415 None:intergenic 35.0%
!!! CTTGTTTTTGAATGCTTTGG+TGG - chr4_2:19979394-19979413 Msa0593650:intron 35.0%
GGTTCCTCTTATCTATATTG+AGG - chr4_2:19979551-19979570 Msa0593650:intron 35.0%
GCTACCTCAATATAGATAAG+AGG + chr4_2:19979558-19979577 None:intergenic 35.0%
TATTCAGAATCATCTGCGTA+CGG - chr4_2:19979626-19979645 Msa0593650:CDS 35.0%
TATGCTCGAGAATTCATGAT+CGG - chr4_2:19979861-19979880 Msa0593650:CDS 35.0%
ATTTCTTCTCTTTCAGCAAG+TGG + chr4_2:19979887-19979906 None:intergenic 35.0%
!!! ATCTTTTGAGTTGGACCAAT+GGG + chr4_2:19979932-19979951 None:intergenic 35.0%
!!! TATCTTTTGAGTTGGACCAA+TGG + chr4_2:19979933-19979952 None:intergenic 35.0%
!!! ATTTTTTGGGATCAGTAGCA+AGG - chr4_2:19979969-19979988 Msa0593650:intron 35.0%
GTCCTCTTACTTACACTAAT+TGG - chr4_2:19980005-19980024 Msa0593650:intron 35.0%
AATTTCCTAAAGTCTGCTTC+TGG + chr4_2:19980303-19980322 None:intergenic 35.0%
! TGACTCTCATTGATGATTTC+AGG - chr4_2:19980418-19980437 Msa0593650:intron 35.0%
ACAAAAATGTAGACATCGAG+CGG - chr4_2:19980475-19980494 Msa0593650:intron 35.0%
CCTTATGATAGCAAAGCTTA+TGG + chr4_2:19980504-19980523 None:intergenic 35.0%
! CCATAAGCTTTGCTATCATA+AGG - chr4_2:19980501-19980520 Msa0593650:intron 35.0%
TGCTATCATAAGGGAAAAAC+TGG - chr4_2:19980511-19980530 Msa0593650:intron 35.0%
CATAAAGAAGTCCATTCAGT+GGG + chr4_2:19980649-19980668 None:intergenic 35.0%
TCATAAAGAAGTCCATTCAG+TGG + chr4_2:19980650-19980669 None:intergenic 35.0%
! TTCTGATGTTGGTGAAGAAA+TGG - chr4_2:19980722-19980741 Msa0593650:intron 35.0%
! ATGTTGGTGAAGAAATGGAT+GGG - chr4_2:19980727-19980746 Msa0593650:intron 35.0%
GTGGTGATTTCTACTACTAT+TGG - chr4_2:19980833-19980852 Msa0593650:CDS 35.0%
GAAACACGACAAAGTAAGAA+AGG - chr4_2:19980931-19980950 Msa0593650:CDS 35.0%
! CAATTGTGTTACTGGTAACT+TGG + chr4_2:19980969-19980988 None:intergenic 35.0%
! GAAGCATTTCGAACTATCTT+CGG - chr4_2:19981120-19981139 Msa0593650:intron 35.0%
ATCTTCGGTAAAGAAAAACC+TGG - chr4_2:19981135-19981154 Msa0593650:intron 35.0%
TGACAAGATTCAAGAAATGG+AGG - chr4_2:19981263-19981282 Msa0593650:intron 35.0%
GGAGGTAAAACATGAAAAGA+TGG - chr4_2:19981281-19981300 Msa0593650:intron 35.0%
GGAAATTGCAAGTTCTTCTA+AGG - chr4_2:19981340-19981359 Msa0593650:intron 35.0%
TATCTTGGTCTGAATTGCTT+TGG + chr4_2:19981377-19981396 None:intergenic 35.0%
AAGCAATTCAGACCAAGATA+TGG - chr4_2:19981377-19981396 Msa0593650:intron 35.0%
AGCAATTCAGACCAAGATAT+GGG - chr4_2:19981378-19981397 Msa0593650:intron 35.0%
ATGAATGTAGCCCATTATTG+TGG + chr4_2:19981437-19981456 None:intergenic 35.0%
CTCATCATTATTTAGGCCAT+GGG + chr4_2:19981469-19981488 None:intergenic 35.0%
CATCAGACAATTGTTCTTCA+AGG + chr4_2:19981691-19981710 None:intergenic 35.0%
!!! AGAACAACCTTTTGATGATG+TGG - chr4_2:19981730-19981749 Msa0593650:intron 35.0%
TCATCTTCCACATCATCAAA+AGG + chr4_2:19981740-19981759 None:intergenic 35.0%
!! GAACAACCTTTTGATGACTT+TGG - chr4_2:19981767-19981786 Msa0593650:intron 35.0%
TCATCTCCAAAGTCATCAAA+AGG + chr4_2:19981776-19981795 None:intergenic 35.0%
! AAGACCAATCTTTTCATGAC+TGG - chr4_2:19981834-19981853 Msa0593650:intron 35.0%
! AGACCAATCTTTTCATGACT+GGG - chr4_2:19981835-19981854 Msa0593650:intron 35.0%
ACCCAAAGTAGAAAGGAATA+AGG + chr4_2:19981939-19981958 None:intergenic 35.0%
CACTGCAATCTTCATTTGTG+AGG - chr4_2:19978672-19978691 Msa0593650:CDS 40.0%
TTCATTTGTGAGGCCATTGT+TGG - chr4_2:19978682-19978701 Msa0593650:CDS 40.0%
TACTACCATGGTTCAAAACC+TGG - chr4_2:19978733-19978752 Msa0593650:CDS 40.0%
! GAAAAATCAAACTAGTGGGC+CGG - chr4_2:19979007-19979026 Msa0593650:CDS 40.0%
TTAATCCAACGAACTGAGAC+CGG + chr4_2:19979029-19979048 None:intergenic 40.0%
CAGTTCTGCTCAATTTCAAG+AGG - chr4_2:19979053-19979072 Msa0593650:intron 40.0%
! AACTTCTTTTGCCTCTTGGA+AGG + chr4_2:19979096-19979115 None:intergenic 40.0%
! TGGTAACTTCTTTTGCCTCT+TGG + chr4_2:19979100-19979119 None:intergenic 40.0%
TAACCTACCACTTGAAGTTG+AGG - chr4_2:19979152-19979171 Msa0593650:CDS 40.0%
AACCTACCACTTGAAGTTGA+GGG - chr4_2:19979153-19979172 Msa0593650:CDS 40.0%
ATATCACCCTCAACTTCAAG+TGG + chr4_2:19979162-19979181 None:intergenic 40.0%
ACCAATGACAATCCAATGGA+AGG - chr4_2:19979249-19979268 Msa0593650:intron 40.0%
ACCTTCCATTGGATTGTCAT+TGG + chr4_2:19979253-19979272 None:intergenic 40.0%
! ATGTGGTGGTGATGATGAAA+TGG + chr4_2:19979316-19979335 None:intergenic 40.0%
! CTTTTGTTACTACAGTGCTC+TGG - chr4_2:19979364-19979383 Msa0593650:intron 40.0%
!! GTTATTGGTTGGCTTTCTGT+TGG - chr4_2:19979483-19979502 Msa0593650:intron 40.0%
TTCAGTTAGGGTCCTATTGT+TGG - chr4_2:19979529-19979548 Msa0593650:intron 40.0%
TCAGTTAGGGTCCTATTGTT+GGG - chr4_2:19979530-19979549 Msa0593650:intron 40.0%
GATAAGAGGAACCCAACAAT+AGG + chr4_2:19979544-19979563 None:intergenic 40.0%
GCCCATTTGTATCATTCAGT+TGG - chr4_2:19979576-19979595 Msa0593650:CDS 40.0%
GAAGGCTATACCAAAGAAGA+AGG - chr4_2:19980027-19980046 Msa0593650:intron 40.0%
TGTTCCTGAAAAAGGAGAGA+AGG - chr4_2:19980161-19980180 Msa0593650:CDS 40.0%
ACATACCAGAAGCAGACTTT+AGG - chr4_2:19980295-19980314 Msa0593650:intron 40.0%
CAAAAATGTAGACATCGAGC+GGG - chr4_2:19980476-19980495 Msa0593650:intron 40.0%
!!! ACTACTGATTTTTTGCCACC+CGG - chr4_2:19980588-19980607 Msa0593650:intron 40.0%
TGGGACTAAAATCCAAGCTT+CGG + chr4_2:19980630-19980649 None:intergenic 40.0%
!! TGGATTTTAGTCCCACTGAA+TGG - chr4_2:19980635-19980654 Msa0593650:intron 40.0%
! GATGTTGGTGAAGAAATGGA+TGG - chr4_2:19980726-19980745 Msa0593650:intron 40.0%
TGGGATGACTCCAGTATTAT+TGG - chr4_2:19980746-19980765 Msa0593650:intron 40.0%
AAAACTTCAGCTTGAGTAGG+AGG + chr4_2:19980907-19980926 None:intergenic 40.0%
CGTAAATTCTGGTCAGTCTT+CGG - chr4_2:19981095-19981114 Msa0593650:intron 40.0%
!! AAGGTGTTGTAACTCTTCCA+TGG + chr4_2:19981173-19981192 None:intergenic 40.0%
TAGTAAAGAGATGGCAGCAA+TGG - chr4_2:19981314-19981333 Msa0593650:intron 40.0%
GCAATTCAGACCAAGATATG+GGG - chr4_2:19981379-19981398 Msa0593650:intron 40.0%
CAATTCAGACCAAGATATGG+GGG - chr4_2:19981380-19981399 Msa0593650:intron 40.0%
ACCCCAAATGACCACAATAA+TGG - chr4_2:19981423-19981442 Msa0593650:intron 40.0%
CCCATTATTGTGGTCATTTG+GGG + chr4_2:19981427-19981446 None:intergenic 40.0%
CCCCAAATGACCACAATAAT+GGG - chr4_2:19981424-19981443 Msa0593650:intron 40.0%
GCCCATTATTGTGGTCATTT+GGG + chr4_2:19981428-19981447 None:intergenic 40.0%
AGCCCATTATTGTGGTCATT+TGG + chr4_2:19981429-19981448 None:intergenic 40.0%
CCTCATCATTATTTAGGCCA+TGG + chr4_2:19981470-19981489 None:intergenic 40.0%
CCATGGCCTAAATAATGATG+AGG - chr4_2:19981467-19981486 Msa0593650:intron 40.0%
GGCCTACATTCATTACCATA+AGG - chr4_2:19981519-19981538 Msa0593650:intron 40.0%
AGGGTGACCAATATTCCTTA+TGG + chr4_2:19981537-19981556 None:intergenic 40.0%
ATCATCTTCTTCCAAGTCGT+CGG + chr4_2:19981813-19981832 None:intergenic 40.0%
CTTCCCAGTCATGAAAAGAT+TGG + chr4_2:19981841-19981860 None:intergenic 40.0%
! TCAGATTGACTCATCAATGC+TGG - chr4_2:19981875-19981894 Msa0593650:intron 40.0%
AAAAAGCAAGATCACAGGCC+AGG - chr4_2:19978041-19978060 Msa0593650:three_prime_UTR 45.0%
GCAAAGCATGTTGGAAAACC+TGG + chr4_2:19978062-19978081 None:intergenic 45.0%
!!! ACATGCCAGGTTTTGAACCA+TGG + chr4_2:19978741-19978760 None:intergenic 45.0%
TGTAGTCAAAGTCACATGCC+AGG + chr4_2:19978754-19978773 None:intergenic 45.0%
CAAGAGGACCTTGTTGATCA+TGG - chr4_2:19979069-19979088 Msa0593650:intron 45.0%
TGGAAGGTCCATGATCAACA+AGG + chr4_2:19979080-19979099 None:intergenic 45.0%
TTGATCATGGACCTTCCAAG+AGG - chr4_2:19979082-19979101 Msa0593650:intron 45.0%
GCAGACACATCGTTTGTACA+TGG + chr4_2:19979729-19979748 None:intergenic 45.0%
! ACAGCCTTCTCTCCTTTTTC+AGG + chr4_2:19980168-19980187 None:intergenic 45.0%
AGTATGACAACTTGCGTGAG+CGG - chr4_2:19980253-19980272 Msa0593650:CDS 45.0%
CTTCTGGTATGTTGTCTGGA+CGG + chr4_2:19980287-19980306 None:intergenic 45.0%
TCTGCTTCTGGTATGTTGTC+TGG + chr4_2:19980291-19980310 None:intergenic 45.0%
!!! CTACTGATTTTTTGCCACCC+GGG - chr4_2:19980589-19980608 Msa0593650:intron 45.0%
!!! TACTGATTTTTTGCCACCCG+GGG - chr4_2:19980590-19980609 Msa0593650:intron 45.0%
CAGAATGTTCCCCTAGTAGT+TGG + chr4_2:19980707-19980726 None:intergenic 45.0%
CTAGGGGAACATTCTGATGT+TGG - chr4_2:19980711-19980730 Msa0593650:intron 45.0%
TAAAGAGATGGCAGCAATGG+AGG - chr4_2:19981317-19981336 Msa0593650:intron 45.0%
AAAGAGATGGCAGCAATGGA+GGG - chr4_2:19981318-19981337 Msa0593650:intron 45.0%
AGACCAAGATATGGGGGATT+TGG - chr4_2:19981386-19981405 Msa0593650:intron 45.0%
CATTCATCTACATCTGCCCA+TGG - chr4_2:19981450-19981469 Msa0593650:intron 45.0%
CAAGGCCATGATTTACCTAC+AGG + chr4_2:19981673-19981692 None:intergenic 45.0%
AAACGACATCGTTGTCGAGT+TGG + chr4_2:19982065-19982084 None:intergenic 45.0%
AACTCGACAACGATGTCGTT+TGG - chr4_2:19982064-19982083 Msa0593650:CDS 45.0%
!!! TAAGTAAATTTTTTTTTATA+GGG + chr4_2:19978190-19978209 None:intergenic 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG + chr4_2:19978191-19978210 None:intergenic 5.0%
CCTCAGGTCATGCATGAGAA+TGG + chr4_2:19977958-19977977 None:intergenic 50.0%
CCATTCTCATGCATGACCTG+AGG - chr4_2:19977955-19977974 Msa0593650:three_prime_UTR 50.0%
AGCTGGAAGTTCAAGCCAAG+TGG - chr4_2:19977995-19978014 Msa0593650:three_prime_UTR 50.0%
TTTGAGCAGATCCTGCCACT+TGG + chr4_2:19978013-19978032 None:intergenic 50.0%
CACCCTCAACTTCAAGTGGT+AGG + chr4_2:19979158-19979177 None:intergenic 50.0%
!! GTAGGGGTGTTACCTTCCAT+TGG + chr4_2:19979264-19979283 None:intergenic 50.0%
GGGCTCCCCTTCTTCATTTA+AGG + chr4_2:19979912-19979931 None:intergenic 50.0%
AATGAAGAAGGGGAGCCCAT+TGG - chr4_2:19979914-19979933 Msa0593650:CDS 50.0%
AGCTTCACAAGACCGAAGCT+TGG - chr4_2:19980615-19980634 Msa0593650:intron 50.0%
AACCACCAGCTCCAACTACT+AGG - chr4_2:19980693-19980712 Msa0593650:intron 50.0%
ACCACCAGCTCCAACTACTA+GGG - chr4_2:19980694-19980713 Msa0593650:intron 50.0%
GCAAGCTTCACTGAGGTTGT+TGG + chr4_2:19980781-19980800 None:intergenic 50.0%
ATTCAGGGCAAGCTTCACTG+AGG + chr4_2:19980788-19980807 None:intergenic 50.0%
CTATGTGTAGCGTGCAACCA+AGG - chr4_2:19980870-19980889 Msa0593650:CDS 50.0%
AGGAGGCTCACAATCATCCT+TGG + chr4_2:19980890-19980909 None:intergenic 50.0%
AAGAGATGGCAGCAATGGAG+GGG - chr4_2:19981319-19981338 Msa0593650:intron 50.0%
CTGCCAAATCCCCCATATCT+TGG + chr4_2:19981392-19981411 None:intergenic 50.0%
AGATCAACCTTCCGACGACT+TGG - chr4_2:19981799-19981818 Msa0593650:intron 50.0%
TCTTCTTCCAAGTCGTCGGA+AGG + chr4_2:19981809-19981828 None:intergenic 50.0%
GGAAGTTCAAGCCAAGTGGC+AGG - chr4_2:19977999-19978018 Msa0593650:three_prime_UTR 55.0%
CCACCAGCTCCAACTACTAG+GGG - chr4_2:19980695-19980714 Msa0593650:intron 55.0%
GTTCCCCTAGTAGTTGGAGC+TGG + chr4_2:19980701-19980720 None:intergenic 55.0%
! GGTCTTGTGAAGCTTGCCCC+GGG + chr4_2:19980609-19980628 None:intergenic 60.0%
! CGGTCTTGTGAAGCTTGCCC+CGG + chr4_2:19980610-19980629 None:intergenic 60.0%
CCCCTAGTAGTTGGAGCTGG+TGG + chr4_2:19980698-19980717 None:intergenic 60.0%
GTGGGCCGGTCTCAGTTCGT+TGG - chr4_2:19979021-19979040 Msa0593650:intron 65.0%
CTTGTGAAGCTTGCCCCGGG+TGG + chr4_2:19980606-19980625 None:intergenic 65.0%
CCATGGCAGCGCACTCTTCC+AGG + chr4_2:19981156-19981175 None:intergenic 65.0%
! CCTGGAAGAGTGCGCTGCCA+TGG - chr4_2:19981153-19981172 Msa0593650:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 19977875 19982228 19977875 ID=Msa0593650;Name=Msa0593650
chr4_2 mRNA 19977875 19982228 19977875 ID=Msa0593650-mRNA-1;Parent=Msa0593650;Name=Msa0593650-mRNA-1;_AED=0.03;_eAED=0.03;_QI=52|1|1|1|1|1|8|345|554
chr4_2 exon 19977875 19978426 19977875 ID=Msa0593650-mRNA-1:exon:5717;Parent=Msa0593650-mRNA-1
chr4_2 exon 19978615 19979028 19978615 ID=Msa0593650-mRNA-1:exon:5716;Parent=Msa0593650-mRNA-1
chr4_2 exon 19979116 19979223 19979116 ID=Msa0593650-mRNA-1:exon:5715;Parent=Msa0593650-mRNA-1
chr4_2 exon 19979571 19979663 19979571 ID=Msa0593650-mRNA-1:exon:5714;Parent=Msa0593650-mRNA-1
chr4_2 exon 19979750 19979953 19979750 ID=Msa0593650-mRNA-1:exon:5713;Parent=Msa0593650-mRNA-1
chr4_2 exon 19980031 19980284 19980031 ID=Msa0593650-mRNA-1:exon:5712;Parent=Msa0593650-mRNA-1
chr4_2 exon 19980833 19981081 19980833 ID=Msa0593650-mRNA-1:exon:5711;Parent=Msa0593650-mRNA-1
chr4_2 exon 19982041 19982228 19982041 ID=Msa0593650-mRNA-1:exon:5710;Parent=Msa0593650-mRNA-1
chr4_2 five_prime_UTR 19982177 19982228 19982177 ID=Msa0593650-mRNA-1:five_prime_utr;Parent=Msa0593650-mRNA-1
chr4_2 CDS 19982041 19982176 19982041 ID=Msa0593650-mRNA-1:cds;Parent=Msa0593650-mRNA-1
chr4_2 CDS 19980833 19981081 19980833 ID=Msa0593650-mRNA-1:cds;Parent=Msa0593650-mRNA-1
chr4_2 CDS 19980031 19980284 19980031 ID=Msa0593650-mRNA-1:cds;Parent=Msa0593650-mRNA-1
chr4_2 CDS 19979750 19979953 19979750 ID=Msa0593650-mRNA-1:cds;Parent=Msa0593650-mRNA-1
chr4_2 CDS 19979571 19979663 19979571 ID=Msa0593650-mRNA-1:cds;Parent=Msa0593650-mRNA-1
chr4_2 CDS 19979116 19979223 19979116 ID=Msa0593650-mRNA-1:cds;Parent=Msa0593650-mRNA-1
chr4_2 CDS 19978615 19979028 19978615 ID=Msa0593650-mRNA-1:cds;Parent=Msa0593650-mRNA-1
chr4_2 CDS 19978220 19978426 19978220 ID=Msa0593650-mRNA-1:cds;Parent=Msa0593650-mRNA-1
chr4_2 three_prime_UTR 19977875 19978219 19977875 ID=Msa0593650-mRNA-1:three_prime_utr;Parent=Msa0593650-mRNA-1
Gene Sequence

>Msa0593650

ATGAGGGCTATAGACTCTGCTGTACGATCCATTCTCATGCATGACCTGAGGAAACAACAATCTTTGACAGCTGGAAGTTCAAGCCAAGTGGCAGGATCTGCTCAAATGCAACATAAAAAGCAAGATCACAGGCCAGTGGGCCGGTCTCAGTTCGTTGGATTAAGCAACAGTTCTGCTCAATTTCAAGAGGACCTTGTTGATCATGGACCTTCCAAGAGGCAAAAGAAGTTACCATCAATGTCACTTGATGATTATTTTAAAATGAATAACCTACCACTTGAAGTTGAGGGTGATATTAACTCTGAAAGTGATAATGGTGATGTTGAGGGTGATATAAACTATGAAAATGATGATGGTGAGAAAACCAATGACAATCCAATGGAAGGAGAAACATCAAAAAAAAGGAAAAGAGGAAGAGGAAGAACATTATGCTCGAGAATTCATGATCGGCCACTTGCTGAAAGAGAAGAAATCACCTTAAATGAAGAAGGGGAGCCCATTGGTCCAACTCAAAAGATAGTTTCTGAATTCAGCAATTTTTTGGGATCAGTAGCAAGGATGTCAGATTTATGTCCTCTTACTTACACTAATTGGAAGGCTATACCAAAGAAGAAGGAGAATATATGGGCTTATGTCAATAAAAGATACATTGTTCCTGAAAAAGGAGAGAAGGCTGTCTATGCTATAATAAATGATGCTTGGAGACGGTACAAATGTGTTATTAAGAGAAATCATTTCACGAAGTATGACAACTTGCGTGAGCGGATGAAAAACCGTCCAGACAACATACCAGAAGCAGACTTTAGGAAATTAATGATTTATTGGGGAATTGAAACCGTTCAAGAAATTGGTCGTCAAAATGCTAAAATTACAGCTCAACAAAAATGTAGACATCGAGCGGGTCCCATAAGCTTTGCTATCATAAGGGAAAAACTGCGTGCAACCAAGGATGATTGTGAGCCTCCTACTCAAGCTGAAGTTTTTATCGAAACACGACAAAGTAAGAAAGGAAATCAGCTTGACCAAGTTACCAGTAACACAATTACAAATCTTCAAGATTTGATCGTAAATTCTGGTCAGTCTTCGGATGAAGCATTTCGAACTATCTTCGGTAAAGAAAAACCTGGAAGAGTGCGCTGCCATGGAAGAGTTACAACACCTTCTCTCTTGAAAAGAAGTAAAGAAATTGGAGAAATTAAAAAAAAGCATGCTATTGAGGTGAAAAATTTAAGTGACAAGATTCAAGAAATGGAGGTAAAACATGAAAAGATGGAGAAAAAACATAGTAAAGAGATGGCAGCAATGGAGGGGAAATTGCAAGTTCTTCTAAGGTTCATGCTGAACCAAAGCAATTCAGACCAAGATATGGGGGATTTGGCAGCTTTGCTGTCAACCCCAAATGACCACAATAATGGGCTACATTCATCTACATCTGCCCATGGCCTAAATAATGATGAGGTAAATCATGGCCTTGAAGAACAATTGTCTGATGACTTTGAAAAAGATGATGAAGAACAACCTTTTGATGATGTGGAAGATGATAATGAAGAACAACCTTTTGATGACTTTGGAGATGATGAAGATCAACCTTCCGACGACTTGGAAGAAGATGATGAAGACCAATCTTTTCATGACTGGGAAGAAGATGAAGAATATTCAGATTGA

Protein sequence

>Msa0593650

MRAIDSAVRSILMHDLRKQQSLTAGSSSQVAGSAQMQHKKQDHRPVGRSQFVGLSNSSAQFQEDLVDHGPSKRQKKLPSMSLDDYFKMNNLPLEVEGDINSESDNGDVEGDINYENDDGEKTNDNPMEGETSKKRKRGRGRTLCSRIHDRPLAEREEITLNEEGEPIGPTQKIVSEFSNFLGSVARMSDLCPLTYTNWKAIPKKKENIWAYVNKRYIVPEKGEKAVYAIINDAWRRYKCVIKRNHFTKYDNLRERMKNRPDNIPEADFRKLMIYWGIETVQEIGRQNAKITAQQKCRHRAGPISFAIIREKLRATKDDCEPPTQAEVFIETRQSKKGNQLDQVTSNTITNLQDLIVNSGQSSDEAFRTIFGKEKPGRVRCHGRVTTPSLLKRSKEIGEIKKKHAIEVKNLSDKIQEMEVKHEKMEKKHSKEMAAMEGKLQVLLRFMLNQSNSDQDMGDLAALLSTPNDHNNGLHSSTSAHGLNNDEVNHGLEEQLSDDFEKDDEEQPFDDVEDDNEEQPFDDFGDDEDQPSDDLEEDDEDQSFHDWEEDEEYSD*