AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0663250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663250 MtrunA17_Chr5g0411971 72.585 383 68 5 205 555 365 742 0.0 553
Msa0663250 MtrunA17_Chr5g0421591 71.802 383 71 5 205 555 340 717 0.0 549
Msa0663250 MtrunA17_Chr5g0421521 71.540 383 72 5 205 555 340 717 0.0 546
Msa0663250 MtrunA17_Chr2g0312631 50.698 430 149 9 185 554 303 729 2.45e-128 400
Msa0663250 MtrunA17_Chr1g0191851 50.498 402 157 7 190 555 97 492 5.14e-119 369
Msa0663250 MtrunA17_Chr7g0272871 49.742 388 154 7 202 554 90 471 1.52e-111 348
Msa0663250 MtrunA17_Chr1g0195111 39.952 418 196 9 189 556 333 745 5.11e-82 276
Msa0663250 MtrunA17_Chr1g0192481 39.286 392 189 7 190 537 3 389 4.08e-78 257
Msa0663250 MtrunA17_Chr7g0271961 38.498 426 206 10 176 556 331 745 3.71e-77 263
Msa0663250 MtrunA17_Chr7g0257301 40.506 395 162 9 227 555 377 764 1.10e-73 253
Msa0663250 MtrunA17_Chr3g0102921 37.813 439 205 12 174 552 366 796 4.51e-73 252
Msa0663250 MtrunA17_Chr5g0447041 35.456 471 209 11 166 552 362 821 7.97e-70 243
Msa0663250 MtrunA17_Chr4g0042061 34.169 439 220 11 172 544 347 782 1.09e-60 214
Msa0663250 MtrunA17_Chr2g0319271 34.699 415 202 9 177 541 352 747 1.67e-60 213
Msa0663250 MtrunA17_Chr8g0369881 37.186 398 201 9 175 540 822 1202 2.75e-60 216
Msa0663250 MtrunA17_Chr5g0407791 33.656 413 241 6 174 556 822 1231 5.75e-59 212
Msa0663250 MtrunA17_Chr2g0280421 35.731 417 208 13 175 542 369 774 4.34e-57 204
Msa0663250 MtrunA17_Chr4g0049011 34.793 411 197 11 177 537 232 621 1.24e-56 200
Msa0663250 MtrunA17_Chr1g0191181 34.884 387 179 11 201 535 49 414 7.14e-52 187
Msa0663250 MtrunA17_Chr8g0367581 39.316 351 161 10 219 532 123 458 1.74e-50 187
Msa0663250 MtrunA17_Chr3g0134191 35.714 364 163 10 243 539 9 368 2.13e-48 181
Msa0663250 MtrunA17_Chr3g0132921 35.028 354 171 8 235 535 2 349 3.20e-47 172
Msa0663250 MtrunA17_Chr4g0045381 38.202 356 149 13 242 539 193 535 1.77e-46 176
Msa0663250 MtrunA17_Chr3g0122121 40.767 287 135 9 272 534 161 436 5.78e-46 174
Msa0663250 MtrunA17_Chr7g0269681 44.500 200 110 1 357 556 17 215 7.17e-45 165
Msa0663250 MtrunA17_Chr1g0153061 34.341 364 168 9 243 539 9 368 7.61e-45 170
Msa0663250 MtrunA17_Chr4g0053211 33.875 369 169 9 242 539 12 376 1.75e-44 169
Msa0663250 MtrunA17_Chr5g0427481 34.302 344 172 8 243 535 18 358 4.01e-44 168
Msa0663250 MtrunA17_Chr2g0322291 36.494 348 156 11 242 534 88 425 4.47e-44 168
Msa0663250 MtrunA17_Chr1g0182151 33.989 356 176 9 242 542 54 405 3.34e-43 165
Msa0663250 MtrunA17_Chr2g0327581 34.341 364 172 11 234 538 40 395 1.45e-42 163
Msa0663250 MtrunA17_Chr4g0069141 40.000 285 137 9 272 535 220 491 3.88e-42 162
Msa0663250 MtrunA17_Chr1g0178411 35.211 355 169 10 242 538 13 364 6.50e-41 158
Msa0663250 MtrunA17_Chr8g0377731 40.278 288 134 11 272 534 116 390 1.51e-40 157
Msa0663250 MtrunA17_Chr7g0266631 34.085 355 173 9 242 538 9 360 2.61e-39 154
Msa0663250 MtrunA17_Chr8g0386891 50.303 165 71 4 381 540 4 162 8.36e-39 147
Msa0663250 MtrunA17_Chr2g0307481 33.069 378 193 11 223 548 51 420 2.78e-38 149
Msa0663250 MtrunA17_Chr4g0062291 40.164 244 137 4 297 536 218 456 2.85e-38 149
Msa0663250 MtrunA17_Chr1g0193221 35.736 333 163 10 243 534 4 326 8.95e-38 149
Msa0663250 MtrunA17_Chr1g0152231 39.921 253 130 7 297 534 88 333 1.21e-37 148
Msa0663250 MtrunA17_Chr3g0145071 34.104 346 179 13 235 543 92 425 1.26e-37 149
Msa0663250 MtrunA17_Chr8g0390991 51.190 168 81 1 381 548 4 170 1.28e-37 146
Msa0663250 MtrunA17_Chr7g0258991 34.884 344 177 12 237 543 68 401 1.31e-37 148
Msa0663250 MtrunA17_Chr4g0035661 34.012 344 172 12 240 543 87 415 7.35e-37 146
Msa0663250 MtrunA17_Chr6g0484501 49.697 165 82 1 373 537 26 189 3.97e-36 135
Msa0663250 MtrunA17_Chr5g0398521 30.504 377 180 13 241 550 56 417 5.80e-34 137
Msa0663250 MtrunA17_Chr7g0245931 32.975 279 155 9 297 550 140 411 4.68e-32 131
Msa0663250 MtrunA17_Chr5g0405181 35.870 276 152 9 268 535 87 345 4.73e-32 131
Msa0663250 MtrunA17_Chr6g0483701 36.735 245 137 7 297 534 119 352 2.47e-31 129
Msa0663250 MtrunA17_Chr7g0238581 35.565 239 144 5 297 534 122 351 1.78e-30 126
Msa0663250 MtrunA17_Chr8g0372171 34.783 276 153 9 268 534 86 343 2.17e-30 126
Msa0663250 MtrunA17_Chr4g0036001 34.286 280 158 9 280 553 103 362 3.51e-28 119
Msa0663250 MtrunA17_Chr2g0331761 34.286 245 147 5 297 537 277 511 5.14e-28 119
Msa0663250 MtrunA17_Chr7g0269691 33.898 236 110 6 170 360 318 552 1.32e-27 117
Msa0663250 MtrunA17_Chr3g0101021 31.769 277 158 8 297 547 150 421 1.44e-27 118
Msa0663250 MtrunA17_Chr4g0070001 32.394 355 171 14 229 534 127 461 3.38e-27 117
Msa0663250 MtrunA17_Chr6g0485471 32.453 265 161 7 297 554 207 460 1.17e-26 114
Msa0663250 MtrunA17_Chr3g0142261 33.088 272 157 9 271 534 88 342 2.47e-26 114
Msa0663250 MtrunA17_Chr4g0067421 34.921 252 140 7 297 534 298 539 7.66e-26 112
Msa0663250 MtrunA17_Chr2g0295881 34.252 254 141 7 297 534 290 533 8.36e-26 112
Msa0663250 MtrunA17_Chr5g0445211 31.900 279 157 9 297 548 151 423 3.46e-25 110
Msa0663250 MtrunA17_Chr8g0390981 34.821 224 93 8 186 360 449 668 4.99e-24 106
Msa0663250 MtrunA17_Chr8g0386901 34.649 228 95 8 183 360 414 637 5.62e-24 106
Msa0663250 MtrunA17_Chr6g0484511 31.538 260 107 8 168 360 187 442 1.26e-23 104
Msa0663250 MtrunA17_Chr1g0187411 29.348 276 144 7 297 538 214 472 5.08e-21 97.4
Msa0663250 MtrunA17_Chr6g0470541 30.631 222 140 8 296 514 92 302 6.80e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663250 AT2G22610.2 61.518 382 112 4 205 555 383 760 1.68e-153 467
Msa0663250 AT2G22610.1 61.518 382 112 4 205 555 383 760 1.89e-153 468
Msa0663250 AT2G22610.3 61.518 382 112 4 205 555 384 761 2.04e-153 468
Msa0663250 AT1G72250.1 52.300 413 146 7 190 555 430 838 1.26e-126 400
Msa0663250 AT1G72250.2 52.300 413 146 7 190 555 439 847 1.39e-126 400
Msa0663250 AT1G72250.4 52.300 413 146 7 190 555 450 858 1.90e-126 400
Msa0663250 AT1G72250.3 52.300 413 146 7 190 555 451 859 1.93e-126 400
Msa0663250 AT5G27550.2 53.056 360 135 4 228 554 118 476 1.41e-116 363
Msa0663250 AT5G27550.1 53.056 360 135 4 228 554 118 476 1.41e-116 363
Msa0663250 AT1G09170.4 40.741 432 200 8 168 556 364 782 8.76e-89 292
Msa0663250 AT1G09170.3 41.067 431 198 8 168 555 364 781 1.39e-88 291
Msa0663250 AT1G09170.7 41.067 431 198 8 168 555 364 781 1.39e-88 291
Msa0663250 AT1G09170.2 40.741 432 200 8 168 556 364 782 4.88e-88 291
Msa0663250 AT1G09170.5 40.741 432 200 8 168 556 364 782 1.67e-87 292
Msa0663250 AT5G27000.1 40.952 420 195 7 186 556 328 743 1.00e-84 283
Msa0663250 AT2G47500.2 39.130 437 220 7 166 557 312 747 1.81e-84 282
Msa0663250 AT2G47500.1 39.130 437 220 7 166 557 312 747 2.23e-84 282
Msa0663250 AT3G44730.1 38.753 449 207 13 146 545 287 716 1.92e-79 270
Msa0663250 AT3G44730.4 38.753 449 207 13 146 545 287 716 1.92e-79 270
Msa0663250 AT3G44730.2 38.753 449 207 13 146 545 332 761 2.12e-79 271
Msa0663250 AT3G44730.3 38.753 449 207 13 146 545 332 761 2.12e-79 271
Msa0663250 AT1G18410.3 40.199 403 194 8 191 550 435 833 4.85e-77 263
Msa0663250 AT1G18410.2 40.199 403 194 8 191 550 435 833 4.85e-77 263
Msa0663250 AT1G18410.4 40.199 403 194 8 191 550 578 976 1.85e-75 260
Msa0663250 AT1G18410.5 40.547 402 186 10 191 550 425 815 5.00e-75 257
Msa0663250 AT1G09170.6 40.849 377 168 7 168 501 364 728 2.05e-74 251
Msa0663250 AT1G09170.8 40.849 377 168 7 168 501 364 728 2.05e-74 251
Msa0663250 AT3G10310.2 38.425 419 206 9 168 545 293 700 3.01e-74 254
Msa0663250 AT3G10310.1 42.222 360 160 8 227 545 348 700 4.55e-74 254
Msa0663250 AT1G73860.2 40.800 375 170 9 212 540 393 761 8.33e-74 253
Msa0663250 AT1G18410.1 40.547 402 186 10 191 550 578 968 1.83e-73 254
Msa0663250 AT1G73860.1 38.889 396 190 9 191 540 455 844 2.67e-73 253
Msa0663250 AT1G63640.5 38.235 408 198 9 183 540 393 796 2.71e-69 241
Msa0663250 AT1G63640.1 38.235 408 198 9 183 540 403 806 3.07e-69 241
Msa0663250 AT1G63640.4 38.235 408 198 9 183 540 403 806 3.07e-69 241
Msa0663250 AT1G63640.3 38.235 408 198 9 183 540 403 806 3.48e-69 241
Msa0663250 AT5G41310.1 36.386 415 191 8 166 540 357 738 1.19e-68 239
Msa0663250 AT1G63640.2 37.592 407 195 9 183 540 403 799 1.13e-66 234
Msa0663250 AT1G55550.1 35.597 427 209 10 172 550 26 434 2.39e-64 226
Msa0663250 AT1G09170.1 35.648 432 186 9 168 556 364 746 1.09e-63 225
Msa0663250 AT4G27180.1 36.427 431 208 11 177 544 307 734 1.27e-63 222
Msa0663250 AT4G27180.2 36.427 431 208 11 177 544 307 734 1.27e-63 222
Msa0663250 AT4G21270.1 33.909 463 240 10 140 545 330 783 1.66e-62 219
Msa0663250 AT4G05190.1 33.839 461 237 11 140 542 327 777 1.15e-60 214
Msa0663250 AT4G05190.2 33.839 461 237 11 140 542 314 764 1.37e-60 214
Msa0663250 AT5G54670.1 34.014 441 227 10 172 549 309 748 1.38e-60 214
Msa0663250 AT5G54670.2 34.014 441 227 10 172 549 309 748 1.38e-60 214
Msa0663250 AT5G54670.3 34.014 441 227 10 172 549 249 688 1.46e-60 213
Msa0663250 AT5G65930.2 33.867 437 247 9 154 556 802 1230 2.18e-57 208
Msa0663250 AT5G65930.1 33.867 437 247 9 154 556 801 1229 2.86e-57 207
Msa0663250 AT5G65930.3 33.333 435 252 8 154 556 808 1236 3.60e-57 207
Msa0663250 AT5G27950.1 34.615 390 185 9 192 535 40 405 7.28e-54 193
Msa0663250 AT5G65460.1 36.111 360 178 11 210 532 106 450 9.43e-50 185
Msa0663250 AT5G65460.4 36.111 360 178 11 210 532 106 450 1.02e-49 185
Msa0663250 AT5G65460.6 36.111 360 178 11 210 532 106 450 1.17e-49 185
Msa0663250 AT5G65460.2 36.111 360 178 11 210 532 106 450 1.45e-49 185
Msa0663250 AT5G10470.1 37.255 357 178 9 210 532 110 454 2.79e-49 184
Msa0663250 AT5G10470.2 37.255 357 178 9 210 532 110 454 2.95e-49 184
Msa0663250 AT3G63480.2 35.457 361 170 9 241 550 2 350 3.17e-48 174
Msa0663250 AT5G65460.3 35.422 367 178 12 210 532 106 457 1.81e-47 179
Msa0663250 AT5G60930.3 36.490 359 158 9 243 535 7 361 2.56e-47 178
Msa0663250 AT5G60930.1 36.490 359 158 9 243 535 7 361 3.99e-47 177
Msa0663250 AT5G60930.2 36.490 359 158 9 243 535 7 361 5.07e-47 177
Msa0663250 AT3G63480.1 35.342 365 169 10 241 550 2 354 1.19e-46 170
Msa0663250 AT3G17360.1 42.807 285 129 10 272 535 235 506 1.70e-46 176
Msa0663250 AT3G17360.3 42.807 285 129 10 272 535 235 506 1.76e-46 176
Msa0663250 AT3G17360.2 42.807 285 129 10 272 535 235 506 1.80e-46 176
Msa0663250 AT3G19050.1 37.110 353 157 12 242 539 193 535 2.54e-46 176
Msa0663250 AT4G14150.1 42.361 288 131 10 272 535 151 427 5.22e-46 174
Msa0663250 AT3G23670.2 42.014 288 132 10 272 535 156 432 1.67e-45 172
Msa0663250 AT3G23670.1 42.014 288 132 10 272 535 156 432 2.52e-45 172
Msa0663250 AT3G44050.1 37.069 348 154 11 242 534 93 430 1.90e-44 169
Msa0663250 AT5G47820.2 33.604 369 170 8 242 539 11 375 7.37e-44 167
Msa0663250 AT5G47820.1 33.604 369 170 8 242 539 11 375 7.37e-44 167
Msa0663250 AT3G50240.2 34.127 378 173 11 243 550 26 397 1.33e-43 167
Msa0663250 AT3G50240.1 34.426 366 165 10 243 539 26 385 2.21e-43 166
Msa0663250 AT3G50240.4 34.426 366 165 10 243 539 26 385 2.58e-43 166
Msa0663250 AT2G28620.1 34.771 371 172 10 242 554 50 408 1.04e-42 164
Msa0663250 AT2G28620.3 34.771 371 172 10 242 554 50 408 1.16e-42 164
Msa0663250 AT2G28620.2 34.771 371 172 10 242 554 50 408 1.16e-42 164
Msa0663250 AT2G37420.1 33.803 355 177 8 242 542 48 398 1.91e-42 163
Msa0663250 AT2G37420.2 33.803 355 177 8 242 542 48 398 1.91e-42 163
Msa0663250 AT1G21730.1 34.808 339 178 10 240 543 73 403 6.14e-42 162
Msa0663250 AT3G49650.1 33.333 351 188 7 243 551 15 361 1.33e-41 160
Msa0663250 AT3G45850.2 34.973 366 178 10 242 554 55 413 2.81e-41 160
Msa0663250 AT3G45850.1 34.973 366 178 10 242 554 55 413 2.81e-41 160
Msa0663250 AT5G27950.2 39.506 243 132 5 304 535 1 239 4.82e-41 154
Msa0663250 AT3G50240.3 39.007 282 130 7 297 539 5 283 8.24e-41 158
Msa0663250 AT1G18550.1 41.909 241 132 4 297 534 246 481 2.81e-40 156
Msa0663250 AT2G36200.1 33.989 356 172 10 242 538 12 363 7.38e-39 152
Msa0663250 AT3G12020.4 35.072 345 177 12 236 543 63 397 9.42e-39 152
Msa0663250 AT3G12020.1 35.072 345 177 12 236 543 63 397 9.42e-39 152
Msa0663250 AT2G36200.2 33.989 356 172 10 242 538 12 363 9.97e-39 152
Msa0663250 AT1G59540.1 39.676 247 133 6 297 534 86 325 2.23e-38 151
Msa0663250 AT5G06670.8 33.528 343 181 11 238 543 62 394 2.58e-38 150
Msa0663250 AT5G06670.4 33.528 343 181 11 238 543 62 394 2.58e-38 150
Msa0663250 AT5G06670.7 33.528 343 181 11 238 543 62 394 2.58e-38 150
Msa0663250 AT5G06670.5 33.528 343 181 11 238 543 62 394 2.65e-38 150
Msa0663250 AT3G12020.3 35.174 344 176 12 237 543 64 397 3.12e-38 150
Msa0663250 AT3G12020.2 35.174 344 176 12 237 543 64 397 3.12e-38 150
Msa0663250 AT5G06670.2 33.528 343 181 11 238 543 62 394 4.63e-38 150
Msa0663250 AT5G06670.3 33.528 343 181 11 238 543 62 394 4.63e-38 150
Msa0663250 AT2G21380.2 35.294 340 173 12 240 543 102 430 5.36e-38 150
Msa0663250 AT2G21380.1 35.294 340 173 12 240 543 102 430 5.36e-38 150
Msa0663250 AT5G06670.6 32.670 352 181 11 238 543 62 403 6.84e-37 147
Msa0663250 AT5G06670.1 32.670 352 181 11 238 543 62 403 6.84e-37 147
Msa0663250 AT4G39050.1 34.593 344 178 12 236 543 92 424 2.79e-36 145
Msa0663250 AT3G10180.2 33.531 337 166 10 243 534 4 327 1.17e-35 143
Msa0663250 AT3G10180.1 33.531 337 166 10 243 534 4 327 1.36e-35 143
Msa0663250 AT1G12430.1 31.267 371 180 12 243 550 71 429 2.70e-35 142
Msa0663250 AT1G12430.2 31.267 371 180 12 243 550 71 429 2.80e-35 142
Msa0663250 AT3G54870.3 32.911 316 152 9 280 544 146 452 9.89e-35 140
Msa0663250 AT3G54870.1 32.911 316 152 9 280 544 146 452 1.05e-34 140
Msa0663250 AT3G54870.2 32.911 316 152 9 280 544 146 452 1.06e-34 140
Msa0663250 AT1G59540.2 38.750 240 131 6 304 534 1 233 1.27e-34 139
Msa0663250 AT1G01950.2 30.769 377 178 13 241 550 59 419 1.43e-34 139
Msa0663250 AT1G01950.1 30.769 377 178 13 241 550 59 419 1.48e-34 139
Msa0663250 AT1G01950.3 30.769 377 178 13 241 550 59 419 3.01e-34 139
Msa0663250 AT1G01950.4 35.000 280 148 9 297 550 7 278 1.61e-33 136
Msa0663250 AT2G21300.2 30.077 389 193 15 212 553 6 362 3.29e-32 132
Msa0663250 AT2G21300.4 30.077 389 193 15 212 553 6 362 3.29e-32 132
Msa0663250 AT2G21300.3 30.077 389 193 15 212 553 6 362 3.29e-32 132
Msa0663250 AT2G21300.1 30.077 389 193 15 212 553 6 362 3.29e-32 132
Msa0663250 AT2G21300.5 30.077 389 193 15 212 553 6 362 3.29e-32 132
Msa0663250 AT4G24170.1 35.357 280 158 8 262 534 63 326 2.20e-31 130
Msa0663250 AT4G24170.2 35.357 280 158 8 262 534 63 326 2.20e-31 130
Msa0663250 AT1G18370.1 30.861 337 173 11 243 534 32 353 4.98e-31 129
Msa0663250 AT5G65460.5 41.206 199 109 4 334 532 14 204 2.00e-30 127
Msa0663250 AT3G16060.1 30.372 349 184 10 239 542 166 500 2.34e-29 123
Msa0663250 AT4G38950.3 33.818 275 157 9 268 534 78 335 4.65e-29 122
Msa0663250 AT4G38950.5 33.818 275 157 9 268 534 78 335 4.65e-29 122
Msa0663250 AT4G38950.4 33.818 275 157 9 268 534 78 335 4.65e-29 122
Msa0663250 AT4G38950.1 33.818 275 157 9 268 534 78 335 4.65e-29 122
Msa0663250 AT4G38950.2 33.818 275 157 9 268 534 78 335 4.65e-29 122
Msa0663250 AT5G66310.2 36.066 244 140 7 297 534 109 342 8.49e-28 119
Msa0663250 AT5G66310.3 36.066 244 140 7 297 534 109 342 8.49e-28 119
Msa0663250 AT5G66310.1 36.066 244 140 7 297 534 109 342 8.49e-28 119
Msa0663250 AT3G43210.3 36.226 265 137 9 280 534 106 348 1.81e-27 118
Msa0663250 AT3G43210.5 36.226 265 137 9 280 534 106 348 1.81e-27 118
Msa0663250 AT3G43210.2 36.226 265 137 9 280 534 106 348 1.81e-27 118
Msa0663250 AT3G43210.4 36.226 265 137 9 280 534 106 348 1.81e-27 118
Msa0663250 AT3G43210.1 36.226 265 137 9 280 534 106 348 1.81e-27 118
Msa0663250 AT5G02370.1 33.613 238 144 5 297 534 117 340 1.87e-27 117
Msa0663250 AT3G16630.2 34.109 258 134 8 297 534 285 526 5.24e-26 113
Msa0663250 AT3G16630.1 34.109 258 134 8 297 534 285 526 5.24e-26 113
Msa0663250 AT3G20150.2 33.688 282 148 12 297 548 178 450 7.66e-26 113
Msa0663250 AT3G20150.1 33.688 282 148 12 297 548 178 450 9.09e-26 112
Msa0663250 AT3G51150.2 33.216 283 163 11 261 534 76 341 9.71e-26 112
Msa0663250 AT3G51150.4 33.216 283 163 11 261 534 76 341 9.71e-26 112
Msa0663250 AT3G51150.3 33.216 283 163 11 261 534 76 341 9.71e-26 112
Msa0663250 AT3G51150.1 33.216 283 163 11 261 534 76 341 1.07e-25 112
Msa0663250 AT4G14330.1 32.411 253 139 7 297 534 132 367 6.80e-24 107
Msa0663250 AT3G51150.5 36.905 168 99 4 373 534 22 188 3.36e-18 89.0
Msa0663250 AT5G42490.1 29.655 290 156 10 268 548 74 324 1.31e-16 84.3
Msa0663250 AT5G42490.2 29.655 290 156 10 268 548 74 324 1.44e-16 84.0
Msa0663250 AT5G23910.2 27.734 256 165 8 296 547 100 339 1.56e-14 77.0
Msa0663250 AT5G23910.1 27.734 256 165 8 296 547 96 335 1.58e-14 77.0

Find 175 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACTTTGGCTTGTGGATT+TGG 0.242107 4_4:+1950857 Msa0663250:CDS
TGCATACCTTGATCATCTTT+TGG 0.247510 4_4:-1949971 None:intergenic
GGAGATGTGATTTCTGCTTT+AGG 0.262486 4_4:+1950966 Msa0663250:CDS
AACCATGGACCTAATTCTTT+TGG 0.277801 4_4:-1949287 None:intergenic
TCCAATCTGAAGCTCGAAAA+TGG 0.279042 4_4:+1946450 Msa0663250:five_prime_UTR
AAGAGGCCAAAGGGAACATT+AGG 0.295298 4_4:+1949807 Msa0663250:CDS
GTATCAATTTGCTTCTTAAC+AGG 0.297522 4_4:-1951353 None:intergenic
AGCTGGAGACATCAAGAAAT+TGG 0.301604 4_4:+1949655 Msa0663250:CDS
TGAATGCTTGGATATCTATT+AGG 0.305363 4_4:-1948914 None:intergenic
AATCGTTCTCTTTCTGCTCT+TGG 0.305874 4_4:+1950945 Msa0663250:CDS
AGGTGAACACATCAAGAAAT+TGG 0.322975 4_4:+1949730 Msa0663250:CDS
CTCTGAATCTGAACAGTCTT+AGG 0.361731 4_4:-1947095 None:intergenic
CTTAGGCCACTTGTCGAATC+TGG 0.370934 4_4:-1947078 None:intergenic
TCTAATCCTATTCGATCTCC+TGG 0.380372 4_4:-1948954 None:intergenic
GGTGTTGAAGTTGGCGGTGG+CGG 0.382336 4_4:+1949007 Msa0663250:CDS
ATGGTTGAAGTTGGTGGTGG+TGG 0.384418 4_4:+1949124 Msa0663250:CDS
GGAGAAGGTCCAAAAGAATT+AGG 0.386566 4_4:+1949278 Msa0663250:CDS
TTTCACTTCGCAAATTTCAT+TGG 0.387078 4_4:+1946529 Msa0663250:five_prime_UTR
GGCGGTGGCACCGGTGTTGA+AGG 0.391114 4_4:+1949025 Msa0663250:CDS
AACTTGTTGATGCTTCAATA+TGG 0.391748 4_4:-1948854 None:intergenic
CGAACAGATAAGAGATTTGC+TGG 0.396132 4_4:+1950398 Msa0663250:CDS
CTACAGGACCAACATCAAAA+AGG 0.409075 4_4:+1950421 Msa0663250:CDS
ATGGTTGAAGTTGGCGGCGG+TGG 0.414738 4_4:+1949304 Msa0663250:CDS
GGTGTTGAAGTTGGCGGTGG+CGG 0.414949 4_4:+1949187 Msa0663250:CDS
GATGGTGTAGTAGGTGGCGG+TGG 0.419892 4_4:+1949250 Msa0663250:CDS
AGAGTGAAGCGCATTGAGTT+AGG 0.420411 4_4:+1951329 Msa0663250:CDS
GATGGTGTAGTAGGTGGTGG+TGG 0.424996 4_4:+1949070 Msa0663250:CDS
GTTGGCGGTGGCGGTGGCAC+CGG 0.427675 4_4:+1949016 Msa0663250:CDS
TTGAAGGTGGTGGTGGCAAA+AGG 0.427775 4_4:+1949041 Msa0663250:CDS
TGAAATTTGCGAAGTGAAAA+CGG 0.429932 4_4:-1946525 None:intergenic
CCAATCGGATATTGAATGCT+TGG 0.430148 4_4:-1948926 None:intergenic
TAGTAGGTGGTGGTGGGGAA+AGG 0.439707 4_4:+1949077 Msa0663250:CDS
TAGTAGGTGGCGGTGGGGAA+AGG 0.441224 4_4:+1949257 Msa0663250:CDS
GAGTAATGGGTATACCTATA+CGG 0.443145 4_4:-1951008 None:intergenic
AGAAAACTCATATTCCGTAT+AGG 0.450934 4_4:+1950994 Msa0663250:CDS
GTTGAAGTTGGCGGTGGCGG+TGG 0.456963 4_4:+1949010 Msa0663250:CDS
GGTGGCTATGAGGCTGTAGA+TGG 0.459191 4_4:+1949322 Msa0663250:CDS
ATAACCGAGGGGTTAATTAC+AGG 0.461910 4_4:+1950289 Msa0663250:CDS
GAGACTTGCAAAGACTGATC+TGG 0.466590 4_4:+1950890 Msa0663250:CDS
ACCGCCGCCAACTTCAACCA+TGG 0.469654 4_4:-1949302 None:intergenic
TAGAATTAGTAATGAGAGGA+GGG 0.476717 4_4:+1950329 Msa0663250:CDS
GCCACCACCACCTTCAACAC+CGG 0.478129 4_4:-1949035 None:intergenic
GGCGGTGACACCGGAGCTAA+AGG 0.478519 4_4:+1949205 Msa0663250:CDS
CTTTGGCTTGTGGATTTGGC+AGG 0.479414 4_4:+1950861 Msa0663250:CDS
ACCGGTGTTGAAGGTGGTGG+TGG 0.482239 4_4:+1949034 Msa0663250:CDS
AGAGGCCAAAGGGAACATTA+GGG 0.482892 4_4:+1949808 Msa0663250:CDS
ATAAGAGATTTGCTGGCTAC+AGG 0.490365 4_4:+1950405 Msa0663250:CDS
GGAAGCAATGCTAGAGCAGT+TGG 0.495369 4_4:+1950622 Msa0663250:CDS
ATGGATGGTGTTGAAGTTGG+CGG 0.497191 4_4:+1949181 Msa0663250:CDS
ATGGATGGTGTTGAAGTTGG+CGG 0.497191 4_4:+1949361 Msa0663250:CDS
TCAGAGTCTCACTGACGTCC+TGG 0.497509 4_4:-1951286 None:intergenic
ATGCGATGGCGAAAGGATGA+AGG 0.499769 4_4:+1948982 Msa0663250:CDS
TTCAGATTCAGAGGAAGAAG+AGG 0.501652 4_4:+1947105 Msa0663250:five_prime_UTR
GAAAACCCAGGAGATCGAAT+AGG 0.505594 4_4:+1948948 Msa0663250:CDS
GTGGTGGTGGGGAAAGGAGA+AGG 0.505951 4_4:+1949083 Msa0663250:CDS
AGTGTACCACGAGCAAACTT+TGG 0.506661 4_4:+1950844 Msa0663250:CDS
AGGAGGACCGATGGTGTAGT+AGG 0.508120 4_4:+1949061 Msa0663250:CDS
AGGAAGACCGATGGTGTAGT+AGG 0.508120 4_4:+1949241 Msa0663250:CDS
ATGGTGTAGTAGGTGGCGGT+GGG 0.514009 4_4:+1949251 Msa0663250:CDS
GAAGGACATCATCATGTCCC+TGG 0.514476 4_4:+1950544 Msa0663250:CDS
GCCACCACCACCTTTAGCTC+CGG 0.514787 4_4:-1949215 None:intergenic
ATTAGGTCCATGGTTGAAGT+TGG 0.515105 4_4:+1949295 Msa0663250:CDS
AGGATGGATGGTGTTGAAGT+TGG 0.519257 4_4:+1949178 Msa0663250:CDS
AGGATGGATGGTGTTGAAGT+TGG 0.519257 4_4:+1949358 Msa0663250:CDS
ATGGTGTAGTAGGTGGTGGT+GGG 0.521928 4_4:+1949071 Msa0663250:CDS
AGGATTAGAGCTCGATGCGA+TGG 0.523663 4_4:+1948968 Msa0663250:CDS
TCACTGACGTCCTGGTCTGA+TGG 0.524612 4_4:-1951278 None:intergenic
GAGCTCGATGCGATGGCGAA+AGG 0.524764 4_4:+1948975 Msa0663250:CDS
AGGTCCATGGTTGAAGTTGG+CGG 0.524957 4_4:+1949298 Msa0663250:CDS
GGAGAAGGTCGAAAAGAACT+AGG 0.525619 4_4:+1949098 Msa0663250:CDS
ATGAAGGATGGTGTTGAAGT+TGG 0.528036 4_4:+1948998 Msa0663250:CDS
ACCTTGGCTTCTACAACACC+AGG 0.529063 4_4:-1950562 None:intergenic
TAGACATACCTAGTGAGTCT+TGG 0.530023 4_4:-1951136 None:intergenic
ACCACCACCAACTTCAACCA+TGG 0.530377 4_4:-1949122 None:intergenic
ATGAAGTTCAAGAGGCCAAA+GGG 0.533974 4_4:+1949798 Msa0663250:CDS
CATAATGTGGAGAAACAAGC+TGG 0.537478 4_4:+1949638 Msa0663250:CDS
GTGGCGGTGGGGAAAGGAGA+AGG 0.538418 4_4:+1949263 Msa0663250:CDS
TGTTTAGAATTAGTAATGAG+AGG 0.538893 4_4:+1950325 Msa0663250:CDS
ACCGGAGCTAAAGGTGGTGG+TGG 0.538905 4_4:+1949214 Msa0663250:CDS
AGTTGGCGGCGGTGGCTATG+AGG 0.539109 4_4:+1949312 Msa0663250:CDS
GAGGAGAGCAGTAGATCTCA+TGG 0.543434 4_4:+1950661 Msa0663250:CDS
GGCACCGGTGTTGAAGGTGG+TGG 0.544188 4_4:+1949031 Msa0663250:CDS
GTTGGCGGTGGCGGTGACAC+CGG 0.544203 4_4:+1949196 Msa0663250:CDS
ATGTTGAAGGTACTGCAGAC+TGG 0.544885 4_4:+1950601 Msa0663250:CDS
GGTGGCAACGAGGCTGCAGA+TGG 0.546589 4_4:+1949142 Msa0663250:CDS
ATGGTCTCAGCGAAGAAGAA+AGG 0.548655 4_4:-1948890 None:intergenic
CGAGCTTCAGATTGGAAGAG+CGG 0.549147 4_4:-1946443 None:intergenic
AAGACTAAGAATTTGATGAA+TGG 0.549296 4_4:+1950819 Msa0663250:CDS
CACGAGCAAACTTTGGCTTG+TGG 0.550821 4_4:+1950851 Msa0663250:CDS
AAGGATGGTGTTGAAGTTGG+CGG 0.552547 4_4:+1949001 Msa0663250:CDS
TTAGAATTAGTAATGAGAGG+AGG 0.554147 4_4:+1950328 Msa0663250:CDS
GGAAGCTATTCGAGAAGAAG+AGG 0.554823 4_4:+1947048 Msa0663250:intron
ACCGCCACCTACTACACCAT+CGG 0.555120 4_4:-1949248 None:intergenic
GCATGTGAGTCCATCAGACC+AGG 0.555419 4_4:+1951268 Msa0663250:CDS
GCCATGGTTGAAGTTGGTGG+TGG 0.555587 4_4:+1949121 Msa0663250:CDS
AGTAGTGATGAAATGTCGGC+TGG 0.556181 4_4:+1949854 Msa0663250:CDS
CATTTACTCCAAGACTCACT+AGG 0.556345 4_4:+1951128 Msa0663250:CDS
ACTAGGGCCATGGTTGAAGT+TGG 0.556432 4_4:+1949115 Msa0663250:CDS
GATGGTGTTGAAGTTGGCGG+TGG 0.556923 4_4:+1949364 Msa0663250:CDS
AGGGCCATGGTTGAAGTTGG+TGG 0.557244 4_4:+1949118 Msa0663250:CDS
ACCGATGGTGTAGTAGGTGG+CGG 0.557388 4_4:+1949247 Msa0663250:CDS
CAGAGAAGAGAGCTAAAGAT+CGG 0.559209 4_4:-1946494 None:intergenic
ACCGATGGTGTAGTAGGTGG+TGG 0.559678 4_4:+1949067 Msa0663250:CDS
GTCACTCAGGTCATCAACCT+TGG 0.561444 4_4:-1950578 None:intergenic
GACATTTCATCACTACTCAA+TGG 0.561739 4_4:-1949848 None:intergenic
CCAAGCATTCAATATCCGAT+TGG 0.562018 4_4:+1948926 Msa0663250:CDS
TATACACCAAAAGATGATCA+AGG 0.562132 4_4:+1949965 Msa0663250:CDS
TCTGGAAGGTGAGCGGCGTA+AGG 0.563790 4_4:+1950908 Msa0663250:CDS
AACGGGCTTACGTGTCTGAA+AGG 0.563864 4_4:-1946353 None:intergenic
TTGTTTGTCAGAACATAATG+TGG 0.564428 4_4:+1949625 Msa0663250:intron
GGTGGACAAATGAGGATGGA+TGG 0.565590 4_4:+1949346 Msa0663250:CDS
AACGAGGCTGCAGATGGTGG+TGG 0.566131 4_4:+1949148 Msa0663250:CDS
CATATCTGTTAGCGTTGTTG+AGG 0.566949 4_4:+1950368 Msa0663250:CDS
CTAAAGGTGGTGGTGGCGAA+AGG 0.567473 4_4:+1949221 Msa0663250:CDS
GGCAACGAGGCTGCAGATGG+TGG 0.567898 4_4:+1949145 Msa0663250:CDS
CTAATCCTATTCGATCTCCT+GGG 0.568128 4_4:-1948953 None:intergenic
GATGGTGTTGAAGTTGGCGG+TGG 0.568175 4_4:+1949184 Msa0663250:CDS
GGATTTCGATGCAGCAAAGG+AGG 0.568791 4_4:+1949892 Msa0663250:CDS
GATGGTGTTGAAGTTGGCGG+TGG 0.571826 4_4:+1949004 Msa0663250:CDS
ACAATTTACATGAACAGAGA+AGG 0.573335 4_4:+1949765 Msa0663250:CDS
GACACCGGAGCTAAAGGTGG+TGG 0.575159 4_4:+1949211 Msa0663250:CDS
GGTGGCACCGGTGTTGAAGG+TGG 0.580381 4_4:+1949028 Msa0663250:CDS
CTAAGACTGTTCAGATTCAG+AGG 0.581573 4_4:+1947096 Msa0663250:five_prime_UTR
GGCTGGGTGTAAAACTGTTG+TGG 0.583793 4_4:+1949871 Msa0663250:CDS
ACCACCACCTACTACACCAT+CGG 0.586618 4_4:-1949068 None:intergenic
GTCCAAAAGAATTAGGTCCA+TGG 0.587767 4_4:+1949285 Msa0663250:CDS
TGGTGGTGGACAAATGAGGA+TGG 0.587880 4_4:+1949342 Msa0663250:CDS
TGACCTGAGTGACATGTTGA+AGG 0.589629 4_4:+1950588 Msa0663250:CDS
GAGTCCTGTAATTAACCCCT+CGG 0.593176 4_4:-1950293 None:intergenic
CCCTGGTGTTGTAGAAGCCA+AGG 0.596888 4_4:+1950561 Msa0663250:CDS
TCCATGGTTGAAGTTGGCGG+CGG 0.600656 4_4:+1949301 Msa0663250:CDS
AATGAAGTTCAAGAGGCCAA+AGG 0.602862 4_4:+1949797 Msa0663250:CDS
ATTTGACCAGATTCGACAAG+TGG 0.608851 4_4:+1947072 Msa0663250:five_prime_UTR
GTCGAAAAGAACTAGGGCCA+TGG 0.612284 4_4:+1949105 Msa0663250:CDS
ACTCTTCAATGAAGTTCAAG+AGG 0.613476 4_4:+1949790 Msa0663250:CDS
ATTCAAACTGTGGAGAAACA+AGG 0.614405 4_4:+1949710 Msa0663250:CDS
AAGGTGGTGGTGGCAAAAGG+AGG 0.615115 4_4:+1949044 Msa0663250:CDS
GAGAAGGTCGAAAAGAACTA+GGG 0.616314 4_4:+1949099 Msa0663250:CDS
TATGAGGCTGTAGATGGTGG+TGG 0.617062 4_4:+1949328 Msa0663250:CDS
GGAAGGTGAGCGGCGTAAGG+AGG 0.618046 4_4:+1950911 Msa0663250:CDS
CTGAGATATTAGAAAAGCTG+AGG 0.624182 4_4:+1949407 Msa0663250:CDS
GATTTCGATGCAGCAAAGGA+GGG 0.625400 4_4:+1949893 Msa0663250:CDS
GAAGCTATTCGAGAAGAAGA+GGG 0.626506 4_4:+1947049 Msa0663250:intron
GGCTATGAGGCTGTAGATGG+TGG 0.627983 4_4:+1949325 Msa0663250:CDS
AATGAAGCATATTCAAACTG+TGG 0.629658 4_4:+1949700 Msa0663250:CDS
TGTGGATTTCGATGCAGCAA+AGG 0.629978 4_4:+1949889 Msa0663250:CDS
AATATCCGATTGGAAAACCC+AGG 0.633825 4_4:+1948936 Msa0663250:CDS
ATGGCAATTGAAGCTCGTTG+AGG 0.635193 4_4:+1946469 Msa0663250:five_prime_UTR
GCTTGGATATCTATTAGGCA+TGG 0.639413 4_4:-1948909 None:intergenic
TGGTGTAGTAGGTGGTGGTG+GGG 0.643420 4_4:+1949072 Msa0663250:CDS
AGGAGAGCAGTAGATCTCAT+GGG 0.648513 4_4:+1950662 Msa0663250:CDS
CACAAGCCAAAGTTTGCTCG+TGG 0.650352 4_4:-1950850 None:intergenic
GTACCTTCAACATGTCACTC+AGG 0.651332 4_4:-1950591 None:intergenic
CTTGCAAAGACTGATCTGGA+AGG 0.652026 4_4:+1950894 Msa0663250:CDS
AAGACCGATGGTGTAGTAGG+TGG 0.653554 4_4:+1949244 Msa0663250:CDS
GGTGGCAAAAGGAGGACCGA+TGG 0.654712 4_4:+1949052 Msa0663250:CDS
ATTGAGTAGTGATGAAATGT+CGG 0.658716 4_4:+1949850 Msa0663250:CDS
AGGACCGATGGTGTAGTAGG+TGG 0.662023 4_4:+1949064 Msa0663250:CDS
ATTCCCAACACAAAATACTC+CGG 0.663543 4_4:-1946290 None:intergenic
TGGTGTAGTAGGTGGCGGTG+GGG 0.663868 4_4:+1949252 Msa0663250:CDS
AGACTGATCTGGAAGGTGAG+CGG 0.664678 4_4:+1950901 Msa0663250:CDS
GGTGACACCGGAGCTAAAGG+TGG 0.668753 4_4:+1949208 Msa0663250:CDS
AAGGAACAAAGAATAACCGA+GGG 0.671951 4_4:+1950277 Msa0663250:CDS
CACTACTCAATGGTCGACAG+CGG 0.673983 4_4:-1949838 None:intergenic
TGGAAGTAATAACATCAATG+AGG 0.676106 4_4:+1950642 Msa0663250:CDS
GAAGGAACAAAGAATAACCG+AGG 0.677728 4_4:+1950276 Msa0663250:CDS
GTTGGCGGTGGAGATGTGCA+TGG 0.704751 4_4:+1949376 Msa0663250:CDS
GTAGTGATGAAATGTCGGCT+GGG 0.704764 4_4:+1949855 Msa0663250:CDS
GGTGGCGAAAGGAAGACCGA+TGG 0.736074 4_4:+1949232 Msa0663250:CDS
TAGATGGTGGTGGACAAATG+AGG 0.738978 4_4:+1949338 Msa0663250:CDS
GGCGGTGGAGATGTGCATGG+TGG 0.740991 4_4:+1949379 Msa0663250:CDS
GATGGCGAAAGGATGAAGGA+TGG 0.748943 4_4:+1948986 Msa0663250:CDS
CCTTGGCTTCTACAACACCA+GGG 0.753740 4_4:-1950561 None:intergenic
AGTTGGTGGTGGTGGCAACG+AGG 0.756717 4_4:+1949132 Msa0663250:CDS
AGGAACAAAGAATAACCGAG+GGG 0.793059 4_4:+1950278 Msa0663250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGAAATTGTAAAAAAAATA+GGG - chr4_4:1950707-1950726 None:intergenic 10.0%
!! ATTATTATTATTTACACAGT+TGG + chr4_4:1950110-1950129 Msa0663250:intron 15.0%
!! CTAGAAATTGTAAAAAAAAT+AGG - chr4_4:1950708-1950727 None:intergenic 15.0%
!! AAGTATAGAAAAAGAAAAAA+TGG - chr4_4:1950753-1950772 None:intergenic 15.0%
!!! TTTTTTTTTTTTTTTGTGTG+TGG + chr4_4:1951080-1951099 Msa0663250:intron 15.0%
!! AATTGAATATAGAATCCTTA+GGG - chr4_4:1946667-1946686 None:intergenic 20.0%
!! ACTTATTTGAACTTATTTAG+TGG + chr4_4:1946832-1946851 Msa0663250:intron 20.0%
!!! AAGTTTTTACACAATTAACA+TGG - chr4_4:1947454-1947473 None:intergenic 20.0%
!! AAAAATTCAGAGAATTTCAA+TGG - chr4_4:1947953-1947972 None:intergenic 20.0%
!!! AAGTTTTAACACAATTAACA+TGG - chr4_4:1948112-1948131 None:intergenic 20.0%
!!! CAAAAGTACAAACTTAATAA+TGG - chr4_4:1948313-1948332 None:intergenic 20.0%
!!! CATTATTAAGTTTGTACTTT+TGG + chr4_4:1948311-1948330 Msa0663250:intron 20.0%
!! AGCAAAAGACAAAAATTTAA+TGG + chr4_4:1948455-1948474 Msa0663250:intron 20.0%
!! AAGAATATTGTTCTTATAGA+AGG + chr4_4:1948608-1948627 Msa0663250:intron 20.0%
!! GCTACAAATTCAATAAATAA+AGG - chr4_4:1948662-1948681 None:intergenic 20.0%
!! AGAAAATAGAAGTTTATAGA+GGG - chr4_4:1948700-1948719 None:intergenic 20.0%
!!! CAAAATTTTTAGATTTGACA+GGG + chr4_4:1949940-1949959 Msa0663250:CDS 20.0%
!!! AGTTACTGAAATTTTTTGTT+AGG + chr4_4:1950500-1950519 Msa0663250:intron 20.0%
!!! GAGATAAAACAAAATTTTGA+AGG + chr4_4:1950526-1950545 Msa0663250:CDS 20.0%
!!! TTTTTACAATTTCTAGTCTT+AGG + chr4_4:1950712-1950731 Msa0663250:intron 20.0%
!!! GTTCATTTTTAGGATTATAT+TGG + chr4_4:1951180-1951199 Msa0663250:intron 20.0%
! CAATTGAATATAGAATCCTT+AGG - chr4_4:1946668-1946687 None:intergenic 25.0%
! CATGATACAAAAACAGAATT+TGG - chr4_4:1946723-1946742 None:intergenic 25.0%
! ATCAAATCTAATGTCCTTAT+TGG + chr4_4:1947010-1947029 Msa0663250:intron 25.0%
! TTAACATGGTTTAATCATTG+AGG - chr4_4:1947440-1947459 None:intergenic 25.0%
! TATTTAGCAATTGATCTGTA+TGG - chr4_4:1947496-1947515 None:intergenic 25.0%
! TACAGATCAATTGCTAAATA+TGG + chr4_4:1947496-1947515 Msa0663250:intron 25.0%
!! ATACTTCTAAAGAAAACACT+TGG - chr4_4:1947539-1947558 None:intergenic 25.0%
! AAAAACTACCAAAGGAAATA+AGG - chr4_4:1947602-1947621 None:intergenic 25.0%
!!! TATTTCCTTTGGTAGTTTTT+TGG + chr4_4:1947602-1947621 Msa0663250:intron 25.0%
! TTAAACCAAAAAACTACCAA+AGG - chr4_4:1947610-1947629 None:intergenic 25.0%
! AAATTTGTACTACTTTGCTT+TGG + chr4_4:1947802-1947821 Msa0663250:intron 25.0%
! ATTATCACTAAGTGAATCAT+TGG - chr4_4:1947829-1947848 None:intergenic 25.0%
! TCAATTTCCTGATTTAATTG+AGG - chr4_4:1947924-1947943 None:intergenic 25.0%
! ATAAAAGGAAATTGAGTTTG+TGG - chr4_4:1947995-1948014 None:intergenic 25.0%
! ATGTTGAAATGCTAGATAAA+AGG - chr4_4:1948010-1948029 None:intergenic 25.0%
! TTAACATGGTTTAATCATTG+AGG - chr4_4:1947440-1947459 None:intergenic 25.0%
! AGTCAATAACACAATTAACA+TGG - chr4_4:1948154-1948173 None:intergenic 25.0%
!!! TGTGTTATTGACTATGTTTT+TGG + chr4_4:1948161-1948180 Msa0663250:intron 25.0%
!!! TAGTTGTTTTTGTGAATCAA+AGG + chr4_4:1948547-1948566 Msa0663250:intron 25.0%
! GAGAAAATAGAAGTTTATAG+AGG - chr4_4:1948701-1948720 None:intergenic 25.0%
!!! ATTGCTTTTTTTGTAACTGA+AGG + chr4_4:1948821-1948840 Msa0663250:intron 25.0%
! TGAAAATACAATTAGTGTGA+TGG - chr4_4:1949603-1949622 None:intergenic 25.0%
!! CCTGTCAAATCTAAAAATTT+TGG - chr4_4:1949942-1949961 None:intergenic 25.0%
!!! CCAAAATTTTTAGATTTGAC+AGG + chr4_4:1949939-1949958 Msa0663250:CDS 25.0%
!! TGTTTAGAATTAGTAATGAG+AGG + chr4_4:1950325-1950344 Msa0663250:CDS 25.0%
!! AAAGATTACCTTTTTGATGT+TGG - chr4_4:1950432-1950451 None:intergenic 25.0%
!!! ACTGAAATTTTTTGTTAGGT+TGG + chr4_4:1950504-1950523 Msa0663250:intron 25.0%
! AAGACTAAGAATTTGATGAA+TGG + chr4_4:1950819-1950838 Msa0663250:CDS 25.0%
! TCTGATTTACATATCAAGAT+GGG - chr4_4:1951046-1951065 None:intergenic 25.0%
! TTCTGATTTACATATCAAGA+TGG - chr4_4:1951047-1951066 None:intergenic 25.0%
! TAAATCAGAAGTTTGAACAA+TGG + chr4_4:1951057-1951076 Msa0663250:intron 25.0%
!!! TTTCTCTGTTGTTCATTTTT+AGG + chr4_4:1951170-1951189 Msa0663250:intron 25.0%
! TATGATGCAGAAAAATATGA+TGG - chr4_4:1951211-1951230 None:intergenic 25.0%
TGAAATTTGCGAAGTGAAAA+CGG - chr4_4:1946528-1946547 None:intergenic 30.0%
TTTCACTTCGCAAATTTCAT+TGG + chr4_4:1946529-1946548 Msa0663250:five_prime_UTR 30.0%
!! TATCTGATATTTGCTATCTC+AGG + chr4_4:1946786-1946805 Msa0663250:intron 30.0%
TAAACTGAAACAATCCAAAC+AGG - chr4_4:1946813-1946832 None:intergenic 30.0%
!! TAGTGGAATAAGTTTTGTAG+TGG + chr4_4:1946849-1946868 Msa0663250:intron 30.0%
! TGACTTATTTGACTTATCTC+AGG + chr4_4:1946878-1946897 Msa0663250:intron 30.0%
! GACTTATTTGACTTATCTCA+GGG + chr4_4:1946879-1946898 Msa0663250:intron 30.0%
AACACCAATCAAAACAAAAC+AGG - chr4_4:1946905-1946924 None:intergenic 30.0%
TTTGTGCTCACTACTAAAAT+GGG - chr4_4:1946954-1946973 None:intergenic 30.0%
! TTTTGTGCTCACTACTAAAA+TGG - chr4_4:1946955-1946974 None:intergenic 30.0%
!! AATGTCCTTATTGGTTGTTT+TGG + chr4_4:1947019-1947038 Msa0663250:intron 30.0%
TTCATCCAAAACAACCAATA+AGG - chr4_4:1947027-1947046 None:intergenic 30.0%
!!! TATTGGTTGTTTTGGATGAA+TGG + chr4_4:1947027-1947046 Msa0663250:intron 30.0%
AAACCATATAGACTGATACA+CGG - chr4_4:1947257-1947276 None:intergenic 30.0%
! TATCAGTCTATATGGTTTGT+AGG + chr4_4:1947259-1947278 Msa0663250:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG + chr4_4:1947363-1947382 Msa0663250:intron 30.0%
! ATACCATACCTTATTTCCTT+TGG + chr4_4:1947591-1947610 Msa0663250:intron 30.0%
TGCAACTTTATCAGCTTAAA+AGG - chr4_4:1947686-1947705 None:intergenic 30.0%
! TTTTAAGCTGATAAAGTTGC+AGG + chr4_4:1947685-1947704 Msa0663250:intron 30.0%
TGATTTAATTGAGGCAATGT+TGG - chr4_4:1947915-1947934 None:intergenic 30.0%
AACATTGCCTCAATTAAATC+AGG + chr4_4:1947914-1947933 Msa0663250:intron 30.0%
TTTCAACATTTAGCATGTAC+TGG + chr4_4:1947363-1947382 Msa0663250:intron 30.0%
ACAAATGCAATCATTCAACA+AGG - chr4_4:1948259-1948278 None:intergenic 30.0%
! TTCTAAGTGTGACACATTTT+TGG - chr4_4:1948411-1948430 None:intergenic 30.0%
TATTGTTCTTATAGAAGGTG+AGG + chr4_4:1948613-1948632 Msa0663250:intron 30.0%
!! AACTTGTTGATGCTTCAATA+TGG - chr4_4:1948857-1948876 None:intergenic 30.0%
TGAATGCTTGGATATCTATT+AGG - chr4_4:1948917-1948936 None:intergenic 30.0%
! TCTATTATGCATTTGAGACA+CGG + chr4_4:1949478-1949497 Msa0663250:intron 30.0%
!! ATACAATTTGCTATGAAGCA+CGG - chr4_4:1949573-1949592 None:intergenic 30.0%
TTGTTTGTCAGAACATAATG+TGG + chr4_4:1949625-1949644 Msa0663250:intron 30.0%
AATGAAGCATATTCAAACTG+TGG + chr4_4:1949700-1949719 Msa0663250:CDS 30.0%
ACAATTTACATGAACAGAGA+AGG + chr4_4:1949765-1949784 Msa0663250:CDS 30.0%
ATTGAGTAGTGATGAAATGT+CGG + chr4_4:1949850-1949869 Msa0663250:CDS 30.0%
TATACACCAAAAGATGATCA+AGG + chr4_4:1949965-1949984 Msa0663250:CDS 30.0%
AATGTTTGCATCTTTGCTTA+TGG + chr4_4:1950222-1950241 Msa0663250:intron 30.0%
ATGTTTGCATCTTTGCTTAT+GGG + chr4_4:1950223-1950242 Msa0663250:intron 30.0%
GTCTGGAAAAACATATACAA+TGG + chr4_4:1950254-1950273 Msa0663250:CDS 30.0%
GGAAAAACATATACAATGGA+AGG + chr4_4:1950258-1950277 Msa0663250:CDS 30.0%
TTAGAATTAGTAATGAGAGG+AGG + chr4_4:1950328-1950347 Msa0663250:CDS 30.0%
TAGAATTAGTAATGAGAGGA+GGG + chr4_4:1950329-1950348 Msa0663250:CDS 30.0%
TGGAAGTAATAACATCAATG+AGG + chr4_4:1950642-1950661 Msa0663250:CDS 30.0%
AGAAAACTCATATTCCGTAT+AGG + chr4_4:1950994-1951013 Msa0663250:CDS 30.0%
GTAACAGTAAAGAGAGTAAT+GGG - chr4_4:1951024-1951043 None:intergenic 30.0%
! TTTTTGTGTGTGGATATTTC+AGG + chr4_4:1951090-1951109 Msa0663250:intron 30.0%
! CAAAAATAGTGCAGTTTTTG+AGG - chr4_4:1951249-1951268 None:intergenic 30.0%
! GTATCAATTTGCTTCTTAAC+AGG - chr4_4:1951356-1951375 None:intergenic 30.0%
ATTCCCAACACAAAATACTC+CGG - chr4_4:1946293-1946312 None:intergenic 35.0%
TGTTGGGAATGAGCAAAAAA+TGG + chr4_4:1946303-1946322 Msa0663250:five_prime_UTR 35.0%
AGTCTGAAAGGAGATTAAAC+GGG - chr4_4:1946373-1946392 None:intergenic 35.0%
GAGTCTGAAAGGAGATTAAA+CGG - chr4_4:1946374-1946393 None:intergenic 35.0%
TTGTGTCTGAAAAATCGCAA+TGG - chr4_4:1946402-1946421 None:intergenic 35.0%
GAGAAAAAAGGAGCTTCAAT+CGG - chr4_4:1946560-1946579 None:intergenic 35.0%
TTGCAGAGAAGAGAGAAAAA+AGG - chr4_4:1946572-1946591 None:intergenic 35.0%
TGCTTCGAAAACTCTTGATT+AGG + chr4_4:1946626-1946645 Msa0663250:intron 35.0%
GCTTCGAAAACTCTTGATTA+GGG + chr4_4:1946627-1946646 Msa0663250:intron 35.0%
GTTTATACTCTCAAACCCTA+AGG + chr4_4:1946649-1946668 Msa0663250:intron 35.0%
ATATAGACTGATACACGGAT+AGG - chr4_4:1947252-1947271 None:intergenic 35.0%
TATCCGTGTATCAGTCTATA+TGG + chr4_4:1947251-1947270 Msa0663250:intron 35.0%
TATGGTTTAATCAGTCTGCA+GGG - chr4_4:1947478-1947497 None:intergenic 35.0%
CTACCAAAGGAAATAAGGTA+TGG - chr4_4:1947597-1947616 None:intergenic 35.0%
GAAGCATGACATTATTGACA+TGG - chr4_4:1947860-1947879 None:intergenic 35.0%
! GTTTTCATGAGCTATCTTGA+TGG + chr4_4:1948191-1948210 Msa0663250:intron 35.0%
! ATTTAATGGACCACACACTA+TGG + chr4_4:1948469-1948488 Msa0663250:intron 35.0%
AACTTAGCAGATAGCAGAAA+AGG - chr4_4:1948756-1948775 None:intergenic 35.0%
! AACCATGGACCTAATTCTTT+TGG - chr4_4:1949290-1949309 None:intergenic 35.0%
CTGAGATATTAGAAAAGCTG+AGG + chr4_4:1949407-1949426 Msa0663250:CDS 35.0%
ATTCAAACTGTGGAGAAACA+AGG + chr4_4:1949710-1949729 Msa0663250:CDS 35.0%
AGGTGAACACATCAAGAAAT+TGG + chr4_4:1949730-1949749 Msa0663250:CDS 35.0%
ACTCTTCAATGAAGTTCAAG+AGG + chr4_4:1949790-1949809 Msa0663250:CDS 35.0%
AAAAACCCTAATGTTCCCTT+TGG - chr4_4:1949816-1949835 None:intergenic 35.0%
GACATTTCATCACTACTCAA+TGG - chr4_4:1949851-1949870 None:intergenic 35.0%
! TGCATACCTTGATCATCTTT+TGG - chr4_4:1949974-1949993 None:intergenic 35.0%
!! GTGTTTGCTTTGTTTAACAG+TGG + chr4_4:1950149-1950168 Msa0663250:intron 35.0%
TCAAGAACAGAGATAACCAT+TGG - chr4_4:1950195-1950214 None:intergenic 35.0%
ATGGTTATCTCTGTTCTTGA+TGG + chr4_4:1950195-1950214 Msa0663250:intron 35.0%
AAGGAACAAAGAATAACCGA+GGG + chr4_4:1950277-1950296 Msa0663250:CDS 35.0%
CATTTCAGTAGTTCACATTC+AGG - chr4_4:1950480-1950499 None:intergenic 35.0%
!! GAGTAATGGGTATACCTATA+CGG - chr4_4:1951011-1951030 None:intergenic 35.0%
GGTAACAGTAAAGAGAGTAA+TGG - chr4_4:1951025-1951044 None:intergenic 35.0%
! ATTTTTCTGCATCATACTGC+AGG + chr4_4:1951215-1951234 Msa0663250:intron 35.0%
AGTTGACCTTCAAAAATCGA+AGG + chr4_4:1951376-1951395 Msa0663250:CDS 35.0%
! CCATTACCTTCGATTTTTGA+AGG - chr4_4:1951385-1951404 None:intergenic 35.0%
CCTTCAAAAATCGAAGGTAA+TGG + chr4_4:1951382-1951401 Msa0663250:CDS 35.0%
! CAAAAATCGAAGGTAATGGT+AGG + chr4_4:1951386-1951405 Msa0663250:CDS 35.0%
CAATGGAGAAAGAGTCTGAA+AGG - chr4_4:1946385-1946404 None:intergenic 40.0%
! TCCAATCTGAAGCTCGAAAA+TGG + chr4_4:1946450-1946469 Msa0663250:five_prime_UTR 40.0%
CAGAGAAGAGAGCTAAAGAT+CGG - chr4_4:1946497-1946516 None:intergenic 40.0%
!! TAGTCGTTTTCTCTCTCACA+AGG + chr4_4:1946594-1946613 Msa0663250:five_prime_UTR 40.0%
!!! AGGGCCTGTTTTGTTTTGAT+TGG + chr4_4:1946898-1946917 Msa0663250:intron 40.0%
GAAGCTATTCGAGAAGAAGA+GGG + chr4_4:1947049-1947068 Msa0663250:intron 40.0%
ATTTGACCAGATTCGACAAG+TGG + chr4_4:1947072-1947091 Msa0663250:five_prime_UTR 40.0%
CTCTGAATCTGAACAGTCTT+AGG - chr4_4:1947098-1947117 None:intergenic 40.0%
CTAAGACTGTTCAGATTCAG+AGG + chr4_4:1947096-1947115 Msa0663250:five_prime_UTR 40.0%
TTCAGATTCAGAGGAAGAAG+AGG + chr4_4:1947105-1947124 Msa0663250:five_prime_UTR 40.0%
!!! AGAAGAGGATTTTGAAGCAG+AGG + chr4_4:1947120-1947139 Msa0663250:five_prime_UTR 40.0%
!!! GATTTTGAAGCAGAGGTTGA+AGG + chr4_4:1947127-1947146 Msa0663250:five_prime_UTR 40.0%
! CCAAATTTCTAGACAGCTCA+AGG - chr4_4:1947190-1947209 None:intergenic 40.0%
CCTTGAGCTGTCTAGAAATT+TGG + chr4_4:1947187-1947206 Msa0663250:intron 40.0%
GCTGTCTAGAAATTTGGATG+TGG + chr4_4:1947193-1947212 Msa0663250:intron 40.0%
GTATGGTTTAATCAGTCTGC+AGG - chr4_4:1947479-1947498 None:intergenic 40.0%
! TGAGCTATCTTGATGGATGT+AGG + chr4_4:1948198-1948217 Msa0663250:intron 40.0%
! GAGCTATCTTGATGGATGTA+GGG + chr4_4:1948199-1948218 Msa0663250:intron 40.0%
! ATCTTGATGGATGTAGGGAA+AGG + chr4_4:1948204-1948223 Msa0663250:intron 40.0%
ACACTATGGCATGATAGAGT+TGG + chr4_4:1948483-1948502 Msa0663250:intron 40.0%
!! TAGAGTTGGTGTGTGAATGT+AGG + chr4_4:1948497-1948516 Msa0663250:intron 40.0%
TTATAGAGGGAATCAAGCGT+GGG - chr4_4:1948687-1948706 None:intergenic 40.0%
TTTATAGAGGGAATCAAGCG+TGG - chr4_4:1948688-1948707 None:intergenic 40.0%
GCTTGGATATCTATTAGGCA+TGG - chr4_4:1948912-1948931 None:intergenic 40.0%
CCAATCGGATATTGAATGCT+TGG - chr4_4:1948929-1948948 None:intergenic 40.0%
CCAAGCATTCAATATCCGAT+TGG + chr4_4:1948926-1948945 Msa0663250:CDS 40.0%
AATATCCGATTGGAAAACCC+AGG + chr4_4:1948936-1948955 Msa0663250:CDS 40.0%
CTAATCCTATTCGATCTCCT+GGG - chr4_4:1948956-1948975 None:intergenic 40.0%
TCTAATCCTATTCGATCTCC+TGG - chr4_4:1948957-1948976 None:intergenic 40.0%
! ATGAAGGATGGTGTTGAAGT+TGG + chr4_4:1948998-1949017 Msa0663250:CDS 40.0%
GAGAAGGTCGAAAAGAACTA+GGG + chr4_4:1949099-1949118 Msa0663250:CDS 40.0%
GGAGAAGGTCCAAAAGAATT+AGG + chr4_4:1949278-1949297 Msa0663250:CDS 40.0%
GTCCAAAAGAATTAGGTCCA+TGG + chr4_4:1949285-1949304 Msa0663250:CDS 40.0%
ATTAGGTCCATGGTTGAAGT+TGG + chr4_4:1949295-1949314 Msa0663250:CDS 40.0%
! ACAAACCATAGGTGTCATGT+CGG + chr4_4:1949509-1949528 Msa0663250:intron 40.0%
CATAATGTGGAGAAACAAGC+TGG + chr4_4:1949638-1949657 Msa0663250:CDS 40.0%
AGCTGGAGACATCAAGAAAT+TGG + chr4_4:1949655-1949674 Msa0663250:CDS 40.0%
AATGAAGTTCAAGAGGCCAA+AGG + chr4_4:1949797-1949816 Msa0663250:CDS 40.0%
ATGAAGTTCAAGAGGCCAAA+GGG + chr4_4:1949798-1949817 Msa0663250:CDS 40.0%
! TTTTGCTGATGCATCACCAA+TGG + chr4_4:1950176-1950195 Msa0663250:intron 40.0%
ATCTTTGCTTATGGGCAAAC+AGG + chr4_4:1950231-1950250 Msa0663250:intron 40.0%
TCTTTGCTTATGGGCAAACA+GGG + chr4_4:1950232-1950251 Msa0663250:intron 40.0%
GAAGGAACAAAGAATAACCG+AGG + chr4_4:1950276-1950295 Msa0663250:CDS 40.0%
AGGAACAAAGAATAACCGAG+GGG + chr4_4:1950278-1950297 Msa0663250:CDS 40.0%
ATAACCGAGGGGTTAATTAC+AGG + chr4_4:1950289-1950308 Msa0663250:CDS 40.0%
CATATCTGTTAGCGTTGTTG+AGG + chr4_4:1950368-1950387 Msa0663250:CDS 40.0%
CGAACAGATAAGAGATTTGC+TGG + chr4_4:1950398-1950417 Msa0663250:CDS 40.0%
!! ATAAGAGATTTGCTGGCTAC+AGG + chr4_4:1950405-1950424 Msa0663250:CDS 40.0%
CTACAGGACCAACATCAAAA+AGG + chr4_4:1950421-1950440 Msa0663250:CDS 40.0%
ATAGGGAAAATGCATGAGCT+TGG - chr4_4:1950690-1950709 None:intergenic 40.0%
!! CAAACTTTGGCTTGTGGATT+TGG + chr4_4:1950857-1950876 Msa0663250:CDS 40.0%
AATCGTTCTCTTTCTGCTCT+TGG + chr4_4:1950945-1950964 Msa0663250:CDS 40.0%
GGAGATGTGATTTCTGCTTT+AGG + chr4_4:1950966-1950985 Msa0663250:CDS 40.0%
CATTTACTCCAAGACTCACT+AGG + chr4_4:1951128-1951147 Msa0663250:CDS 40.0%
TAGACATACCTAGTGAGTCT+TGG - chr4_4:1951139-1951158 None:intergenic 40.0%
ACAACAGAGAAAGCTGCAAT+AGG - chr4_4:1951162-1951181 None:intergenic 40.0%
GAAGAGCGGAAAAATCGCAA+TGG - chr4_4:1946432-1946451 None:intergenic 45.0%
!! GCCATTTTCGAGCTTCAGAT+TGG - chr4_4:1946454-1946473 None:intergenic 45.0%
ATGGCAATTGAAGCTCGTTG+AGG + chr4_4:1946469-1946488 Msa0663250:five_prime_UTR 45.0%
TTGCTATCTCAGGTCCTGTT+TGG + chr4_4:1946796-1946815 Msa0663250:intron 45.0%
GGAAGCTATTCGAGAAGAAG+AGG + chr4_4:1947048-1947067 Msa0663250:intron 45.0%
CATGGTTTGATCAGTCTGCA+AGG - chr4_4:1948136-1948155 None:intergenic 45.0%
CTCTATCATGCCATAGTGTG+TGG - chr4_4:1948482-1948501 None:intergenic 45.0%
ATGGTCTCAGCGAAGAAGAA+AGG - chr4_4:1948893-1948912 None:intergenic 45.0%
! GATCTCCTGGGTTTTCCAAT+CGG - chr4_4:1948944-1948963 None:intergenic 45.0%
GAAAACCCAGGAGATCGAAT+AGG + chr4_4:1948948-1948967 Msa0663250:CDS 45.0%
! AAGGATGGTGTTGAAGTTGG+CGG + chr4_4:1949001-1949020 Msa0663250:CDS 45.0%
GGAGAAGGTCGAAAAGAACT+AGG + chr4_4:1949098-1949117 Msa0663250:CDS 45.0%
!! CAGATGGTGGTGGAAAAATG+AGG + chr4_4:1949158-1949177 Msa0663250:CDS 45.0%
!! TGGTGGTGGAAAAATGAGGA+TGG + chr4_4:1949162-1949181 Msa0663250:CDS 45.0%
GGTGGAAAAATGAGGATGGA+TGG + chr4_4:1949166-1949185 Msa0663250:CDS 45.0%
! AGGATGGATGGTGTTGAAGT+TGG + chr4_4:1949178-1949197 Msa0663250:CDS 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG + chr4_4:1949181-1949200 Msa0663250:CDS 45.0%
!! TAGATGGTGGTGGACAAATG+AGG + chr4_4:1949338-1949357 Msa0663250:CDS 45.0%
! AGGATGGATGGTGTTGAAGT+TGG + chr4_4:1949178-1949197 Msa0663250:CDS 45.0%
! ATGGATGGTGTTGAAGTTGG+CGG + chr4_4:1949181-1949200 Msa0663250:CDS 45.0%
AAGAGGCCAAAGGGAACATT+AGG + chr4_4:1949807-1949826 Msa0663250:CDS 45.0%
AGAGGCCAAAGGGAACATTA+GGG + chr4_4:1949808-1949827 Msa0663250:CDS 45.0%
AGTAGTGATGAAATGTCGGC+TGG + chr4_4:1949854-1949873 Msa0663250:CDS 45.0%
! GTAGTGATGAAATGTCGGCT+GGG + chr4_4:1949855-1949874 Msa0663250:CDS 45.0%
TGTGGATTTCGATGCAGCAA+AGG + chr4_4:1949889-1949908 Msa0663250:CDS 45.0%
GATTTCGATGCAGCAAAGGA+GGG + chr4_4:1949893-1949912 Msa0663250:CDS 45.0%
GAGTCCTGTAATTAACCCCT+CGG - chr4_4:1950296-1950315 None:intergenic 45.0%
CAGTAGTTCACATTCAGGTG+TGG - chr4_4:1950475-1950494 None:intergenic 45.0%
TGACCTGAGTGACATGTTGA+AGG + chr4_4:1950588-1950607 Msa0663250:CDS 45.0%
GTACCTTCAACATGTCACTC+AGG - chr4_4:1950594-1950613 None:intergenic 45.0%
!! ATGTTGAAGGTACTGCAGAC+TGG + chr4_4:1950601-1950620 Msa0663250:CDS 45.0%
AGGAGAGCAGTAGATCTCAT+GGG + chr4_4:1950662-1950681 Msa0663250:CDS 45.0%
AGTGTACCACGAGCAAACTT+TGG + chr4_4:1950844-1950863 Msa0663250:CDS 45.0%
GAGACTTGCAAAGACTGATC+TGG + chr4_4:1950890-1950909 Msa0663250:CDS 45.0%
CTTGCAAAGACTGATCTGGA+AGG + chr4_4:1950894-1950913 Msa0663250:CDS 45.0%
TTTCTGCATCATACTGCAGG+AGG + chr4_4:1951218-1951237 Msa0663250:intron 45.0%
AGAGTGAAGCGCATTGAGTT+AGG + chr4_4:1951329-1951348 Msa0663250:CDS 45.0%
! AACGGGCTTACGTGTCTGAA+AGG - chr4_4:1946356-1946375 None:intergenic 50.0%
CGAGCTTCAGATTGGAAGAG+CGG - chr4_4:1946446-1946465 None:intergenic 50.0%
CTTAGGCCACTTGTCGAATC+TGG - chr4_4:1947081-1947100 None:intergenic 50.0%
AGGATTAGAGCTCGATGCGA+TGG + chr4_4:1948968-1948987 Msa0663250:CDS 50.0%
ATGCGATGGCGAAAGGATGA+AGG + chr4_4:1948982-1949001 Msa0663250:CDS 50.0%
GATGGCGAAAGGATGAAGGA+TGG + chr4_4:1948986-1949005 Msa0663250:CDS 50.0%
!! TTGAAGGTGGTGGTGGCAAA+AGG + chr4_4:1949041-1949060 Msa0663250:CDS 50.0%
ACCACCACCTACTACACCAT+CGG - chr4_4:1949071-1949090 None:intergenic 50.0%
! ATGGTGTAGTAGGTGGTGGT+GGG + chr4_4:1949071-1949090 Msa0663250:CDS 50.0%
GTCGAAAAGAACTAGGGCCA+TGG + chr4_4:1949105-1949124 Msa0663250:CDS 50.0%
ACTAGGGCCATGGTTGAAGT+TGG + chr4_4:1949115-1949134 Msa0663250:CDS 50.0%
ACCACCACCAACTTCAACCA+TGG - chr4_4:1949125-1949144 None:intergenic 50.0%
!! ATGGTTGAAGTTGGTGGTGG+TGG + chr4_4:1949124-1949143 Msa0663250:CDS 50.0%
AGGAAGACCGATGGTGTAGT+AGG + chr4_4:1949241-1949260 Msa0663250:CDS 50.0%
AAGACCGATGGTGTAGTAGG+TGG + chr4_4:1949244-1949263 Msa0663250:CDS 50.0%
AGGTCCATGGTTGAAGTTGG+CGG + chr4_4:1949298-1949317 Msa0663250:CDS 50.0%
! TATGAGGCTGTAGATGGTGG+TGG + chr4_4:1949328-1949347 Msa0663250:CDS 50.0%
!! TGGTGGTGGACAAATGAGGA+TGG + chr4_4:1949342-1949361 Msa0663250:CDS 50.0%
GGTGGACAAATGAGGATGGA+TGG + chr4_4:1949346-1949365 Msa0663250:CDS 50.0%
CGGACACAGACACAAACCAT+AGG + chr4_4:1949498-1949517 Msa0663250:intron 50.0%
! CATAGGTGTCATGTCGGTGT+CGG + chr4_4:1949515-1949534 Msa0663250:intron 50.0%
TATGAAGCACGGACACTCCT+CGG - chr4_4:1949562-1949581 None:intergenic 50.0%
CACTACTCAATGGTCGACAG+CGG - chr4_4:1949841-1949860 None:intergenic 50.0%
GGCTGGGTGTAAAACTGTTG+TGG + chr4_4:1949871-1949890 Msa0663250:CDS 50.0%
GGATTTCGATGCAGCAAAGG+AGG + chr4_4:1949892-1949911 Msa0663250:CDS 50.0%
GAAGGACATCATCATGTCCC+TGG + chr4_4:1950544-1950563 Msa0663250:CDS 50.0%
CCTTGGCTTCTACAACACCA+GGG - chr4_4:1950564-1950583 None:intergenic 50.0%
ACCTTGGCTTCTACAACACC+AGG - chr4_4:1950565-1950584 None:intergenic 50.0%
GTCACTCAGGTCATCAACCT+TGG - chr4_4:1950581-1950600 None:intergenic 50.0%
GGAAGCAATGCTAGAGCAGT+TGG + chr4_4:1950622-1950641 Msa0663250:CDS 50.0%
GAGGAGAGCAGTAGATCTCA+TGG + chr4_4:1950661-1950680 Msa0663250:CDS 50.0%
! CACAAGCCAAAGTTTGCTCG+TGG - chr4_4:1950853-1950872 None:intergenic 50.0%
!! CACGAGCAAACTTTGGCTTG+TGG + chr4_4:1950851-1950870 Msa0663250:CDS 50.0%
!! CTTTGGCTTGTGGATTTGGC+AGG + chr4_4:1950861-1950880 Msa0663250:CDS 50.0%
AGACTGATCTGGAAGGTGAG+CGG + chr4_4:1950901-1950920 Msa0663250:CDS 50.0%
! GATGGTGTTGAAGTTGGCGG+TGG + chr4_4:1949004-1949023 Msa0663250:CDS 55.0%
!! AAGGTGGTGGTGGCAAAAGG+AGG + chr4_4:1949044-1949063 Msa0663250:CDS 55.0%
AGGAGGACCGATGGTGTAGT+AGG + chr4_4:1949061-1949080 Msa0663250:CDS 55.0%
AGGACCGATGGTGTAGTAGG+TGG + chr4_4:1949064-1949083 Msa0663250:CDS 55.0%
ACCGATGGTGTAGTAGGTGG+TGG + chr4_4:1949067-1949086 Msa0663250:CDS 55.0%
! GATGGTGTAGTAGGTGGTGG+TGG + chr4_4:1949070-1949089 Msa0663250:CDS 55.0%
! TGGTGTAGTAGGTGGTGGTG+GGG + chr4_4:1949072-1949091 Msa0663250:CDS 55.0%
!! TAGTAGGTGGTGGTGGGGAA+AGG + chr4_4:1949077-1949096 Msa0663250:CDS 55.0%
AGGGCCATGGTTGAAGTTGG+TGG + chr4_4:1949118-1949137 Msa0663250:CDS 55.0%
!! GCCATGGTTGAAGTTGGTGG+TGG + chr4_4:1949121-1949140 Msa0663250:CDS 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG + chr4_4:1949004-1949023 Msa0663250:CDS 55.0%
!! CTAAAGGTGGTGGTGGCGAA+AGG + chr4_4:1949221-1949240 Msa0663250:CDS 55.0%
ACCGATGGTGTAGTAGGTGG+CGG + chr4_4:1949067-1949086 Msa0663250:CDS 55.0%
ACCGCCACCTACTACACCAT+CGG - chr4_4:1949251-1949270 None:intergenic 55.0%
! ATGGTGTAGTAGGTGGCGGT+GGG + chr4_4:1949251-1949270 Msa0663250:CDS 55.0%
TCCATGGTTGAAGTTGGCGG+CGG + chr4_4:1949301-1949320 Msa0663250:CDS 55.0%
GGTGGCTATGAGGCTGTAGA+TGG + chr4_4:1949322-1949341 Msa0663250:CDS 55.0%
GGCTATGAGGCTGTAGATGG+TGG + chr4_4:1949325-1949344 Msa0663250:CDS 55.0%
! GATGGTGTTGAAGTTGGCGG+TGG + chr4_4:1949004-1949023 Msa0663250:CDS 55.0%
CGACACCGACATGACACCTA+TGG - chr4_4:1949517-1949536 None:intergenic 55.0%
GCTTATGGGCAAACAGGGTC+TGG + chr4_4:1950237-1950256 Msa0663250:intron 55.0%
!! CCCTGGTGTTGTAGAAGCCA+AGG + chr4_4:1950561-1950580 Msa0663250:CDS 55.0%
GCATGTGAGTCCATCAGACC+AGG + chr4_4:1951268-1951287 Msa0663250:CDS 55.0%
TCACTGACGTCCTGGTCTGA+TGG - chr4_4:1951281-1951300 None:intergenic 55.0%
TCAGAGTCTCACTGACGTCC+TGG - chr4_4:1951289-1951308 None:intergenic 55.0%
GAGCTCGATGCGATGGCGAA+AGG + chr4_4:1948975-1948994 Msa0663250:CDS 60.0%
! GGTGTTGAAGTTGGCGGTGG+CGG + chr4_4:1949007-1949026 Msa0663250:CDS 60.0%
! ACCGGTGTTGAAGGTGGTGG+TGG + chr4_4:1949034-1949053 Msa0663250:CDS 60.0%
GCCACCACCACCTTCAACAC+CGG - chr4_4:1949038-1949057 None:intergenic 60.0%
GGTGGCAAAAGGAGGACCGA+TGG + chr4_4:1949052-1949071 Msa0663250:CDS 60.0%
!! GTGGTGGTGGGGAAAGGAGA+AGG + chr4_4:1949083-1949102 Msa0663250:CDS 60.0%
!! AGTTGGTGGTGGTGGCAACG+AGG + chr4_4:1949132-1949151 Msa0663250:CDS 60.0%
! AACGAGGCTGCAGATGGTGG+TGG + chr4_4:1949148-1949167 Msa0663250:CDS 60.0%
! GGTGTTGAAGTTGGCGGTGG+CGG + chr4_4:1949007-1949026 Msa0663250:CDS 60.0%
GGTGACACCGGAGCTAAAGG+TGG + chr4_4:1949208-1949227 Msa0663250:CDS 60.0%
GACACCGGAGCTAAAGGTGG+TGG + chr4_4:1949211-1949230 Msa0663250:CDS 60.0%
! ACCGGAGCTAAAGGTGGTGG+TGG + chr4_4:1949214-1949233 Msa0663250:CDS 60.0%
! GCCACCACCACCTTTAGCTC+CGG - chr4_4:1949218-1949237 None:intergenic 60.0%
GGTGGCGAAAGGAAGACCGA+TGG + chr4_4:1949232-1949251 Msa0663250:CDS 60.0%
! GATGGTGTAGTAGGTGGCGG+TGG + chr4_4:1949250-1949269 Msa0663250:CDS 60.0%
! TGGTGTAGTAGGTGGCGGTG+GGG + chr4_4:1949252-1949271 Msa0663250:CDS 60.0%
! TAGTAGGTGGCGGTGGGGAA+AGG + chr4_4:1949257-1949276 Msa0663250:CDS 60.0%
ACCGCCGCCAACTTCAACCA+TGG - chr4_4:1949305-1949324 None:intergenic 60.0%
ATGGTTGAAGTTGGCGGCGG+TGG + chr4_4:1949304-1949323 Msa0663250:CDS 60.0%
GTTGGCGGTGGAGATGTGCA+TGG + chr4_4:1949376-1949395 Msa0663250:CDS 60.0%
!! CATGTCGGTGTCGGACACAC+CGG + chr4_4:1949524-1949543 Msa0663250:intron 60.0%
!! ATGTCGGTGTCGGACACACC+GGG + chr4_4:1949525-1949544 Msa0663250:intron 60.0%
TCTGGAAGGTGAGCGGCGTA+AGG + chr4_4:1950908-1950927 Msa0663250:CDS 60.0%
! GTTGAAGTTGGCGGTGGCGG+TGG + chr4_4:1949010-1949029 Msa0663250:CDS 65.0%
!! GGTGGCACCGGTGTTGAAGG+TGG + chr4_4:1949028-1949047 Msa0663250:CDS 65.0%
!! GGCACCGGTGTTGAAGGTGG+TGG + chr4_4:1949031-1949050 Msa0663250:CDS 65.0%
GGTGGCAACGAGGCTGCAGA+TGG + chr4_4:1949142-1949161 Msa0663250:CDS 65.0%
GGCAACGAGGCTGCAGATGG+TGG + chr4_4:1949145-1949164 Msa0663250:CDS 65.0%
GGCGGTGACACCGGAGCTAA+AGG + chr4_4:1949205-1949224 Msa0663250:CDS 65.0%
GTGGCGGTGGGGAAAGGAGA+AGG + chr4_4:1949263-1949282 Msa0663250:CDS 65.0%
AGTTGGCGGCGGTGGCTATG+AGG + chr4_4:1949312-1949331 Msa0663250:CDS 65.0%
GGCGGTGGAGATGTGCATGG+TGG + chr4_4:1949379-1949398 Msa0663250:CDS 65.0%
! ACGGACACTCCTCGGACTGG+GGG - chr4_4:1949554-1949573 None:intergenic 65.0%
CACGGACACTCCTCGGACTG+GGG - chr4_4:1949555-1949574 None:intergenic 65.0%
GCACGGACACTCCTCGGACT+GGG - chr4_4:1949556-1949575 None:intergenic 65.0%
AGCACGGACACTCCTCGGAC+TGG - chr4_4:1949557-1949576 None:intergenic 65.0%
GGAAGGTGAGCGGCGTAAGG+AGG + chr4_4:1950911-1950930 Msa0663250:CDS 65.0%
!! GGCGGTGGCACCGGTGTTGA+AGG + chr4_4:1949025-1949044 Msa0663250:CDS 70.0%
! GTTGGCGGTGGCGGTGACAC+CGG + chr4_4:1949196-1949215 Msa0663250:CDS 70.0%
!! TCCTCGGACTGGGGGTGTCC+CGG - chr4_4:1949546-1949565 None:intergenic 70.0%
! GTTGGCGGTGGCGGTGGCAC+CGG + chr4_4:1949016-1949035 Msa0663250:CDS 75.0%
ACCGGGACACCCCCAGTCCG+AGG + chr4_4:1949542-1949561 Msa0663250:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 1946288 1951415 1946288 ID=Msa0663250;Name=Msa0663250
chr4_4 mRNA 1946288 1951415 1946288 ID=Msa0663250-mRNA-1;Parent=Msa0663250;Name=Msa0663250-mRNA-1;_AED=0.17;_eAED=0.17;_QI=463|0.88|0.8|1|0.66|0.6|10|0|557
chr4_4 exon 1946288 1946360 1946288 ID=Msa0663250-mRNA-1:exon:504;Parent=Msa0663250-mRNA-1
chr4_4 exon 1946390 1946615 1946390 ID=Msa0663250-mRNA-1:exon:505;Parent=Msa0663250-mRNA-1
chr4_4 exon 1947053 1947148 1947053 ID=Msa0663250-mRNA-1:exon:506;Parent=Msa0663250-mRNA-1
chr4_4 exon 1948843 1949448 1948843 ID=Msa0663250-mRNA-1:exon:507;Parent=Msa0663250-mRNA-1
chr4_4 exon 1949636 1949986 1949636 ID=Msa0663250-mRNA-1:exon:508;Parent=Msa0663250-mRNA-1
chr4_4 exon 1950253 1950442 1950253 ID=Msa0663250-mRNA-1:exon:509;Parent=Msa0663250-mRNA-1
chr4_4 exon 1950522 1950683 1950522 ID=Msa0663250-mRNA-1:exon:510;Parent=Msa0663250-mRNA-1
chr4_4 exon 1950800 1951015 1950800 ID=Msa0663250-mRNA-1:exon:511;Parent=Msa0663250-mRNA-1
chr4_4 exon 1951112 1951149 1951112 ID=Msa0663250-mRNA-1:exon:512;Parent=Msa0663250-mRNA-1
chr4_4 exon 1951237 1951415 1951237 ID=Msa0663250-mRNA-1:exon:513;Parent=Msa0663250-mRNA-1
chr4_4 five_prime_UTR 1946288 1946360 1946288 ID=Msa0663250-mRNA-1:five_prime_utr;Parent=Msa0663250-mRNA-1
chr4_4 five_prime_UTR 1946390 1946615 1946390 ID=Msa0663250-mRNA-1:five_prime_utr;Parent=Msa0663250-mRNA-1
chr4_4 five_prime_UTR 1947053 1947148 1947053 ID=Msa0663250-mRNA-1:five_prime_utr;Parent=Msa0663250-mRNA-1
chr4_4 five_prime_UTR 1948843 1948910 1948843 ID=Msa0663250-mRNA-1:five_prime_utr;Parent=Msa0663250-mRNA-1
chr4_4 CDS 1948911 1949448 1948911 ID=Msa0663250-mRNA-1:cds;Parent=Msa0663250-mRNA-1
chr4_4 CDS 1949636 1949986 1949636 ID=Msa0663250-mRNA-1:cds;Parent=Msa0663250-mRNA-1
chr4_4 CDS 1950253 1950442 1950253 ID=Msa0663250-mRNA-1:cds;Parent=Msa0663250-mRNA-1
chr4_4 CDS 1950522 1950683 1950522 ID=Msa0663250-mRNA-1:cds;Parent=Msa0663250-mRNA-1
chr4_4 CDS 1950800 1951015 1950800 ID=Msa0663250-mRNA-1:cds;Parent=Msa0663250-mRNA-1
chr4_4 CDS 1951112 1951149 1951112 ID=Msa0663250-mRNA-1:cds;Parent=Msa0663250-mRNA-1
chr4_4 CDS 1951237 1951415 1951237 ID=Msa0663250-mRNA-1:cds;Parent=Msa0663250-mRNA-1
Gene Sequence

>Msa0663250

ATGCCTAATAGATATCCAAGCATTCAATATCCGATTGGAAAACCCAGGAGATCGAATAGGATTAGAGCTCGATGCGATGGCGAAAGGATGAAGGATGGTGTTGAAGTTGGCGGTGGCGGTGGCACCGGTGTTGAAGGTGGTGGTGGCAAAAGGAGGACCGATGGTGTAGTAGGTGGTGGTGGGGAAAGGAGAAGGTCGAAAAGAACTAGGGCCATGGTTGAAGTTGGTGGTGGTGGCAACGAGGCTGCAGATGGTGGTGGAAAAATGAGGATGGATGGTGTTGAAGTTGGCGGTGGCGGTGACACCGGAGCTAAAGGTGGTGGTGGCGAAAGGAAGACCGATGGTGTAGTAGGTGGCGGTGGGGAAAGGAGAAGGTCCAAAAGAATTAGGTCCATGGTTGAAGTTGGCGGCGGTGGCTATGAGGCTGTAGATGGTGGTGGACAAATGAGGATGGATGGTGTTGAAGTTGGCGGTGGAGATGTGCATGGTGGTTGTGCTGAGATATTAGAAAAGCTGAGGAGTGAACTCATTGAAACGAAACATAATGTGGAGAAACAAGCTGGAGACATCAAGAAATTGGAAGAAACATTGAGCAGTTTACAAATGAAGCATATTCAAACTGTGGAGAAACAAGGTGAACACATCAAGAAATTGGAAGAAGCGTTGAACAATTTACATGAACAGAGAAGGAAACTCTTCAATGAAGTTCAAGAGGCCAAAGGGAACATTAGGGTTTTTTGCCGCTGTCGACCATTGAGTAGTGATGAAATGTCGGCTGGGTGTAAAACTGTTGTGGATTTCGATGCAGCAAAGGAGGGATGTCTTAGAATTTTGCACAACTCCAAAATTTTTAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGGGTCTGGAAAAACATATACAATGGAAGGAACAAAGAATAACCGAGGGGTTAATTACAGGACTCTAGAGTATTTGTTTAGAATTAGTAATGAGAGGAGGGAAACATTTTCATACGACATATCTGTTAGCGTTGTTGAGGTCTATAACGAACAGATAAGAGATTTGCTGGCTACAGGACCAACATCAAAAAGGTTGGAGATAAAACAAAATTTTGAAGGACATCATCATGTCCCTGGTGTTGTAGAAGCCAAGGTTGATGACCTGAGTGACATGTTGAAGGTACTGCAGACTGGAAGCAATGCTAGAGCAGTTGGAAGTAATAACATCAATGAGGAGAGCAGTAGATCTCATGGCGTGCTATGTATAACAGTAAAGACTAAGAATTTGATGAATGGCGAGTGTACCACGAGCAAACTTTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTTGCAAAGACTGATCTGGAAGGTGAGCGGCGTAAGGAGGCACAAAATATCAATCGTTCTCTTTCTGCTCTTGGAGATGTGATTTCTGCTTTAGGTTCTAAGAAAACTCATATTCCGTATAGGAATTCTAAATTGACACATTTACTCCAAGACTCACTAGGAGGACACTCCTCAAAAACTGCACTATTTTTGCATGTGAGTCCATCAGACCAGGACGTCAGTGAGACTCTGAGTTCACTTAATTTTGCAACGAGAGTGAAGCGCATTGAGTTAGGTCCTGTTAAGAAGCAAATTGATACAGTTGACCTTCAAAAATCGAAGGTAATGGTAGGTTGCTGA
Protein sequence

>Msa0663250

MPNRYPSIQYPIGKPRRSNRIRARCDGERMKDGVEVGGGGGTGVEGGGGKRRTDGVVGGGGERRRSKRTRAMVEVGGGGNEAADGGGKMRMDGVEVGGGGDTGAKGGGGERKTDGVVGGGGERRRSKRIRSMVEVGGGGYEAVDGGGQMRMDGVEVGGGDVHGGCAEILEKLRSELIETKHNVEKQAGDIKKLEETLSSLQMKHIQTVEKQGEHIKKLEEALNNLHEQRRKLFNEVQEAKGNIRVFCRCRPLSSDEMSAGCKTVVDFDAAKEGCLRILHNSKIFRFDRVYTPKDDQGSGKTYTMEGTKNNRGVNYRTLEYLFRISNERRETFSYDISVSVVEVYNEQIRDLLATGPTSKRLEIKQNFEGHHHVPGVVEAKVDDLSDMLKVLQTGSNARAVGSNNINEESSRSHGVLCITVKTKNLMNGECTTSKLWLVDLAGSERLAKTDLEGERRKEAQNINRSLSALGDVISALGSKKTHIPYRNSKLTHLLQDSLGGHSSKTALFLHVSPSDQDVSETLSSLNFATRVKRIELGPVKKQIDTVDLQKSKVMVGC*