Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537190 | XP_024638076.1 | 92.347 | 980 | 70 | 3 | 1 | 976 | 1 | 979 | 0.0 | 1776 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537190 | A0A396I3C8 | 92.347 | 980 | 70 | 3 | 1 | 976 | 1 | 979 | 0.0 | 1776 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0537190 | 0.810019 | 1.418936e-50 | -8.615850e-47 |
| Msa0055040 | Msa0537190 | 0.807848 | 4.136316e-50 | -8.615850e-47 |
| Msa0085360 | Msa0537190 | -0.810842 | 9.425999e-51 | -8.615850e-47 |
| Msa0094120 | Msa0537190 | 0.808339 | 3.250809e-50 | -8.615850e-47 |
| Msa0110970 | Msa0537190 | 0.800788 | 1.222641e-48 | -8.615850e-47 |
| Msa0116770 | Msa0537190 | 0.805930 | 1.052222e-49 | -8.615850e-47 |
| Msa0124340 | Msa0537190 | 0.813180 | 2.916382e-51 | -8.615850e-47 |
| Msa0135380 | Msa0537190 | 0.809257 | 2.069509e-50 | -8.615850e-47 |
| Msa0157290 | Msa0537190 | 0.808827 | 2.558239e-50 | -8.615850e-47 |
| Msa0165210 | Msa0537190 | 0.816830 | 4.517673e-52 | -8.615850e-47 |
| Msa0165220 | Msa0537190 | 0.823021 | 1.732731e-53 | -8.615850e-47 |
| Msa0173990 | Msa0537190 | 0.809263 | 2.063294e-50 | -8.615850e-47 |
| Msa0186890 | Msa0537190 | 0.809094 | 2.242329e-50 | -8.615850e-47 |
| Msa0225740 | Msa0537190 | 0.809141 | 2.190981e-50 | -8.615850e-47 |
| Msa0402330 | Msa0537190 | 0.800338 | 1.510365e-48 | -8.615850e-47 |
| Msa0410650 | Msa0537190 | 0.823373 | 1.434514e-53 | -8.615850e-47 |
| Msa0419820 | Msa0537190 | 0.804671 | 1.931026e-49 | -8.615850e-47 |
| Msa0423040 | Msa0537190 | 0.805453 | 1.324949e-49 | -8.615850e-47 |
| Msa0432770 | Msa0537190 | 0.822850 | 1.899771e-53 | -8.615850e-47 |
| Msa0480000 | Msa0537190 | 0.825373 | 4.855620e-54 | -8.615850e-47 |
| Msa0283520 | Msa0537190 | 0.807333 | 5.321292e-50 | -8.615850e-47 |
| Msa0309770 | Msa0537190 | 0.803503 | 3.380275e-49 | -8.615850e-47 |
| Msa0311860 | Msa0537190 | 0.801012 | 1.100600e-48 | -8.615850e-47 |
| Msa0317510 | Msa0537190 | 0.801538 | 8.589050e-49 | -8.615850e-47 |
| Msa0355270 | Msa0537190 | 0.800381 | 1.480343e-48 | -8.615850e-47 |
| Msa0357020 | Msa0537190 | 0.804011 | 2.650375e-49 | -8.615850e-47 |
| Msa0484780 | Msa0537190 | 0.812263 | 4.629683e-51 | -8.615850e-47 |
| Msa0507680 | Msa0537190 | 0.824749 | 6.819450e-54 | -8.615850e-47 |
| Msa0511310 | Msa0537190 | 0.803037 | 4.219939e-49 | -8.615850e-47 |
| Msa0516320 | Msa0537190 | 0.800885 | 1.168128e-48 | -8.615850e-47 |
| Msa0521880 | Msa0537190 | 0.811917 | 5.507650e-51 | -8.615850e-47 |
| Msa0537190 | Msa0541860 | 0.808010 | 3.820068e-50 | -8.615850e-47 |
| Msa0537190 | Msa0546680 | 0.800226 | 1.591544e-48 | -8.615850e-47 |
| Msa0537190 | Msa0547360 | 0.805724 | 1.162769e-49 | -8.615850e-47 |
| Msa0537190 | Msa0593650 | 0.881907 | 1.624222e-70 | -8.615850e-47 |
| Msa0537190 | Msa0621490 | 0.821029 | 5.016849e-53 | -8.615850e-47 |
| Msa0537190 | Msa0625720 | 0.801058 | 1.077043e-48 | -8.615850e-47 |
| Msa0537190 | Msa0633670 | 0.871544 | 6.305681e-67 | -8.615850e-47 |
| Msa0537190 | Msa0633840 | 0.816436 | 5.534325e-52 | -8.615850e-47 |
| Msa0537190 | Msa0638070 | 0.812829 | 3.481101e-51 | -8.615850e-47 |
| Msa0537190 | Msa0638280 | 0.816814 | 4.555801e-52 | -8.615850e-47 |
| Msa0537190 | Msa0638320 | 0.805088 | 1.580115e-49 | -8.615850e-47 |
| Msa0537190 | Msa0650020 | 0.801172 | 1.020561e-48 | -8.615850e-47 |
| Msa0537190 | Msa0657970 | 0.801306 | 9.580829e-49 | -8.615850e-47 |
| Msa0537190 | Msa0689010 | 0.803472 | 3.430431e-49 | -8.615850e-47 |
| Msa0537190 | Msa0693380 | 0.821653 | 3.600787e-53 | -8.615850e-47 |
| Msa0537190 | Msa0703230 | 0.808024 | 3.795386e-50 | -8.615850e-47 |
| Msa0537190 | Msa0737560 | 0.811443 | 6.982635e-51 | -8.615850e-47 |
| Msa0537190 | Msa0760380 | 0.810540 | 1.095675e-50 | -8.615850e-47 |
| Msa0537190 | Msa0813740 | 0.801115 | 1.048504e-48 | -8.615850e-47 |
| Msa0537190 | Msa0824660 | 0.809582 | 1.761947e-50 | -8.615850e-47 |
| Msa0537190 | Msa0850960 | 0.841886 | 3.620884e-58 | -8.615850e-47 |
| Msa0537190 | Msa0856910 | 0.816366 | 5.739928e-52 | -8.615850e-47 |
| Msa0537190 | Msa0880140 | 0.810739 | 9.921773e-51 | -8.615850e-47 |
| Msa0537190 | Msa0909000 | -0.809092 | 2.244473e-50 | -8.615850e-47 |
| Msa0537190 | Msa0920610 | 0.813576 | 2.386332e-51 | -8.615850e-47 |
| Msa0537190 | Msa0944190 | 0.805099 | 1.571770e-49 | -8.615850e-47 |
| Msa0537190 | Msa1019640 | 0.815749 | 7.880784e-52 | -8.615850e-47 |
| Msa0537190 | Msa1063950 | 0.805289 | 1.434316e-49 | -8.615850e-47 |
| Msa0537190 | Msa1065370 | 0.801004 | 1.104849e-48 | -8.615850e-47 |
| Msa0537190 | Msa1082500 | 0.825451 | 4.653367e-54 | -8.615850e-47 |
| Msa0537190 | Msa1085200 | 0.819843 | 9.386161e-53 | -8.615850e-47 |
| Msa0537190 | Msa1104370 | 0.813585 | 2.376153e-51 | -8.615850e-47 |
| Msa0537190 | Msa1108160 | 0.808003 | 3.833362e-50 | -8.615850e-47 |
| Msa0537190 | Msa1111110 | 0.814566 | 1.443462e-51 | -8.615850e-47 |
| Msa0537190 | Msa1171870 | 0.810792 | 9.664614e-51 | -8.615850e-47 |
| Msa0537190 | Msa1203250 | 0.824713 | 6.953313e-54 | -8.615850e-47 |
| Msa0537190 | Msa1217860 | 0.817717 | 2.852850e-52 | -8.615850e-47 |
| Msa0537190 | Msa1276190 | 0.805555 | 1.261477e-49 | -8.615850e-47 |
| Msa0537190 | Msa1287460 | 0.802001 | 6.901405e-49 | -8.615850e-47 |
| Msa0537190 | Msa1306430 | 0.807389 | 5.177857e-50 | -8.615850e-47 |
| Msa0537190 | Msa1340260 | 0.819773 | 9.741284e-53 | -8.615850e-47 |
| Msa0537190 | Msa1343070 | 0.835479 | 1.638594e-56 | -8.615850e-47 |
| Msa0537190 | Msa1366600 | 0.801975 | 6.986247e-49 | -8.615850e-47 |
| Msa0537190 | Msa1371430 | 0.819210 | 1.308655e-52 | -8.615850e-47 |
| Msa0537190 | Msa1415640 | 0.836779 | 7.662523e-57 | -8.615850e-47 |
| Msa0537190 | Msa1427060 | 0.824013 | 1.015978e-53 | -8.615850e-47 |
| Msa0537190 | Msa1439960 | 0.814833 | 1.259694e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537190 | MtrunA17_Chr4g0011741 | 92.347 | 980 | 70 | 3 | 1 | 976 | 1 | 979 | 0.0 | 1776 |
| Msa0537190 | MtrunA17_Chr6g0472201 | 51.699 | 412 | 171 | 5 | 535 | 940 | 29 | 418 | 1.43e-139 | 424 |
| Msa0537190 | MtrunA17_Chr3g0096851 | 56.557 | 244 | 98 | 2 | 535 | 773 | 29 | 269 | 8.70e-94 | 298 |
| Msa0537190 | MtrunA17_Chr7g0226581 | 69.856 | 209 | 55 | 2 | 695 | 903 | 1 | 201 | 2.22e-91 | 292 |
| Msa0537190 | MtrunA17_Chr5g0409781 | 76.744 | 129 | 30 | 0 | 607 | 735 | 47 | 175 | 1.01e-65 | 218 |
| Msa0537190 | MtrunA17_Chr2g0306531 | 41.622 | 185 | 94 | 4 | 721 | 903 | 2 | 174 | 1.15e-31 | 123 |
| Msa0537190 | MtrunA17_Chr2g0306521 | 46.316 | 95 | 50 | 1 | 558 | 651 | 236 | 330 | 1.54e-23 | 102 |
| Msa0537190 | MtrunA17_Chr7g0226591 | 45.714 | 105 | 47 | 3 | 204 | 303 | 94 | 193 | 3.08e-14 | 72.8 |
| Msa0537190 | MtrunA17_Chr7g0226591 | 44.928 | 138 | 55 | 7 | 444 | 567 | 70 | 200 | 3.55e-14 | 72.4 |
| Msa0537190 | MtrunA17_Chr2g0305311 | 24.625 | 333 | 209 | 10 | 592 | 912 | 183 | 485 | 7.81e-14 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0537190 | AT3G30200.1 | 26.667 | 270 | 176 | 8 | 589 | 840 | 193 | 458 | 3.46e-18 | 89.7 |
| Msa0537190 | AT1G40087.1 | 26.568 | 271 | 174 | 8 | 588 | 840 | 75 | 338 | 3.79e-18 | 88.2 |
Find 191 sgRNAs with CRISPR-Local
Find 568 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGCTCCCCTTCTTCATTTA+AGG | 0.093712 | 4_1:-15054520 | None:intergenic |
| AACATCCACTTTATACTTTC+TGG | 0.100460 | 4_1:-15052812 | None:intergenic |
| GCCACTTGGATTGAACTTTC+AGG | 0.170263 | 4_1:-15050762 | None:intergenic |
| TATCACAATGAAAGTAAATA+AGG | 0.196877 | 4_1:+15049834 | Msa0537190:exon |
| TAAGGAAATTAATGATTTAT+TGG | 0.199157 | 4_1:+15054924 | Msa0537190:CDS |
| CATTGATGATTTCAGGAAAT+TGG | 0.204677 | 4_1:+15055036 | Msa0537190:intron |
| GTCCTCTTACTTACACTAAT+TGG | 0.212199 | 4_1:+15054616 | Msa0537190:CDS |
| CATATATTCTCCTTCTTCTT+TGG | 0.215996 | 4_1:-15054648 | None:intergenic |
| AAGGAAATTAATGATTTATT+GGG | 0.220798 | 4_1:+15054925 | Msa0537190:CDS |
| GCCCATTATTGTCATCATTT+GGG | 0.226112 | 4_1:-15056036 | None:intergenic |
| ATGTATCACAAAGGTGATTT+TGG | 0.227729 | 4_1:+15056759 | Msa0537190:three_prime_UTR |
| CCATGGCAGCGCACTCTTCC+AGG | 0.230720 | 4_1:-15055764 | None:intergenic |
| AAAACTTACAATTGTGTTAC+TGG | 0.234856 | 4_1:-15055585 | None:intergenic |
| GGAAATTGCAAGTTCTTCTT+AGG | 0.250836 | 4_1:+15055951 | Msa0537190:CDS |
| CCTTATGATAGCAAAGCTTA+TGG | 0.259101 | 4_1:-15055112 | None:intergenic |
| CACGATCGACAAGGTCCTTT+TGG | 0.259459 | 4_1:-15051678 | None:intergenic |
| TTGAAAAGAAGTAAAGAAAT+TGG | 0.277839 | 4_1:+15055809 | Msa0537190:CDS |
| AGATACATTGTTCCTGAAAA+AGG | 0.278882 | 4_1:+15054764 | Msa0537190:CDS |
| ACCTTATCCCTTTCTACTTT+GGG | 0.291188 | 4_1:+15056540 | Msa0537190:three_prime_UTR |
| AGCCCATTATTGTCATCATT+TGG | 0.293822 | 4_1:-15056037 | None:intergenic |
| ACCGATGTAAACATCATCTT+TGG | 0.298416 | 4_1:-15050130 | None:intergenic |
| CAAAGAAGAAGGAGAATATA+TGG | 0.298681 | 4_1:+15054649 | Msa0537190:CDS |
| AATTTCCTTAAGTCTGCTTC+TGG | 0.304263 | 4_1:-15054911 | None:intergenic |
| AACATACCTCGTTATTATTT+AGG | 0.319972 | 4_1:-15056084 | None:intergenic |
| GCAAAGTTCTAGTTTAAATC+AGG | 0.322392 | 4_1:+15050470 | Msa0537190:CDS |
| ACCTTCCATTGGATTGTCAT+TGG | 0.333646 | 4_1:-15053859 | None:intergenic |
| CAATTGTGTTACTGGTAACT+TGG | 0.347417 | 4_1:-15055577 | None:intergenic |
| ACCCCAAATGATGACAATAA+TGG | 0.347737 | 4_1:+15056034 | Msa0537190:CDS |
| CAAGATTTGATCGTAAATTC+TGG | 0.349141 | 4_1:+15055695 | Msa0537190:CDS |
| TGTGACACTGAGGGAATCTT+TGG | 0.349893 | 4_1:-15051727 | None:intergenic |
| TATCTTGGTCTGAATTGCTT+TGG | 0.356836 | 4_1:-15055985 | None:intergenic |
| AACCTTATCCCTTTCTACTT+TGG | 0.356852 | 4_1:+15056539 | Msa0537190:three_prime_UTR |
| CAAGAGGACCTTGTTGATCA+TGG | 0.361988 | 4_1:+15053678 | Msa0537190:CDS |
| CCTTTGGTCATTCTTTAGAA+TGG | 0.364604 | 4_1:-15050721 | None:intergenic |
| TCAATGATTGTTGTATCCTT+TGG | 0.381600 | 4_1:-15050737 | None:intergenic |
| CCCCAAATGATGACAATAAT+GGG | 0.381775 | 4_1:+15056035 | Msa0537190:CDS |
| CTTATGATAGCAAAGCTTAT+GGG | 0.385281 | 4_1:-15055111 | None:intergenic |
| GGAAAAGGAGGCACGCGACT+TGG | 0.386753 | 4_1:+15049856 | Msa0537190:CDS |
| ATCTGAGAATCAATTGATTA+CGG | 0.386776 | 4_1:+15047823 | Msa0537190:five_prime_UTR |
| GCAGAGGACTTTGTAATGTC+TGG | 0.390946 | 4_1:-15050396 | None:intergenic |
| AAGCAATTCAGACCAAGATA+TGG | 0.396175 | 4_1:+15055988 | Msa0537190:CDS |
| CGTTTGATCATGCTTGAGAA+TGG | 0.397941 | 4_1:-15050571 | None:intergenic |
| GTAGGGGTGTTACCTTTCAT+TGG | 0.400408 | 4_1:-15051883 | None:intergenic |
| CGTAAATTCTGGTCAGTCTT+CGG | 0.402447 | 4_1:+15055706 | Msa0537190:CDS |
| GAAAAGGAGGCACGCGACTT+GGG | 0.403387 | 4_1:+15049857 | Msa0537190:CDS |
| CCGTTGATCATGCTTGAGAA+TGG | 0.406746 | 4_1:-15052939 | None:intergenic |
| CCGTTGTTCATGCATGAGAA+TGG | 0.406746 | 4_1:-15053026 | None:intergenic |
| CCATAAGCTTTGCTATCATA+AGG | 0.406969 | 4_1:+15055112 | Msa0537190:CDS |
| ATCACAATGAAAGTAAATAA+GGG | 0.408475 | 4_1:+15049835 | Msa0537190:exon |
| ATTAACTCTGAAAGTGATAA+TGG | 0.409576 | 4_1:+15053789 | Msa0537190:CDS |
| TCAAAGATTGTTGTTTCCTC+AGG | 0.411003 | 4_1:-15053138 | None:intergenic |
| AAGTGACAAGATTCAAGAAA+TGG | 0.411534 | 4_1:+15055871 | Msa0537190:CDS |
| ACTTACAGTTCTCCACTAGA+AGG | 0.419485 | 4_1:-15052619 | None:intergenic |
| CTTCCCAGTCATGAAAAGAT+TGG | 0.424153 | 4_1:-15056443 | None:intergenic |
| CATCAGACAATTGTTCTTCA+AGG | 0.426301 | 4_1:-15056296 | None:intergenic |
| GGAAGATCAATCCAAGTTGC+AGG | 0.427190 | 4_1:+15050615 | Msa0537190:CDS |
| TCTGCTTCTGGTATGTTGTC+TGG | 0.427735 | 4_1:-15054899 | None:intergenic |
| TAATCATCAAGTGACATTGA+TGG | 0.431600 | 4_1:-15053726 | None:intergenic |
| TTTATCCTGTAGGTAAATCA+TGG | 0.432016 | 4_1:+15056273 | Msa0537190:intron |
| CCGATGTAAACATCATCTTT+GGG | 0.444317 | 4_1:-15050129 | None:intergenic |
| GAAGCATTTCGAACTATCTT+CGG | 0.449754 | 4_1:+15055731 | Msa0537190:CDS |
| AACTCGATAACGATGTCGTT+TGG | 0.451029 | 4_1:+15056669 | Msa0537190:three_prime_UTR |
| TTCCAATTAGTGTAAGTAAG+AGG | 0.461637 | 4_1:-15054618 | None:intergenic |
| GAAATCACCTTAAATGAAGA+AGG | 0.461651 | 4_1:+15054513 | Msa0537190:CDS |
| ACATACCAGAAGCAGACTTA+AGG | 0.461762 | 4_1:+15054906 | Msa0537190:CDS |
| ACTAATGTAAACATCAGCTT+TGG | 0.464189 | 4_1:-15052572 | None:intergenic |
| TGTGATACATATCAACAATC+TGG | 0.465050 | 4_1:-15056746 | None:intergenic |
| ATTATCAACCCAAAGTAGAA+AGG | 0.468080 | 4_1:-15056548 | None:intergenic |
| CTAGTGGGCCACTCTCGGTT+AGG | 0.470673 | 4_1:+15051622 | Msa0537190:intron |
| CCTGGAAGAGTGCGCTGCCA+TGG | 0.474546 | 4_1:+15055764 | Msa0537190:CDS |
| CCCATTATTGTCATCATTTG+GGG | 0.476482 | 4_1:-15056035 | None:intergenic |
| AGCAATTCAGACCAAGATAT+GGG | 0.476590 | 4_1:+15055989 | Msa0537190:CDS |
| TCATCTTCCAAGTCATCAAA+AGG | 0.480538 | 4_1:-15056345 | None:intergenic |
| TTGAGAATGGATCGATTAGC+GGG | 0.480707 | 4_1:-15052926 | None:intergenic |
| TCATTTCCAAAGTCATCAAA+AGG | 0.481346 | 4_1:-15056381 | None:intergenic |
| ATGCTATAATAAATGATGCT+TGG | 0.483767 | 4_1:+15054801 | Msa0537190:CDS |
| ATGAAAGTAAATAAGGGAAA+AGG | 0.485460 | 4_1:+15049841 | Msa0537190:CDS |
| TTCTTCTGCTCAATTCCAAA+AGG | 0.487887 | 4_1:+15051663 | Msa0537190:CDS |
| CCTCAGGTCATGCATGAGAA+TGG | 0.488919 | 4_1:-15053122 | None:intergenic |
| GGAGGTAAAACATGAAAAGA+TGG | 0.490515 | 4_1:+15055892 | Msa0537190:CDS |
| TTTGAGCAGATCCTGCAACT+TGG | 0.490867 | 4_1:-15050626 | None:intergenic |
| TTCTCAGATGAATTGAAAAG+AGG | 0.492954 | 4_1:-15047809 | None:intergenic |
| GGCCACTCTCGGTTAGGTGG+TGG | 0.496350 | 4_1:+15051628 | Msa0537190:CDS |
| GTAGGGGTGTTACCTTCCAT+TGG | 0.499221 | 4_1:-15053870 | None:intergenic |
| ACCCAAAGTAGAAAGGGATA+AGG | 0.509218 | 4_1:-15056541 | None:intergenic |
| GTGGGCCGGTCTCAGTTCGT+TGG | 0.511416 | 4_1:+15053630 | Msa0537190:intron |
| TTTGAGCAGATCCTGCCACT+TGG | 0.512670 | 4_1:-15053177 | None:intergenic |
| TTATCAACCCAAAGTAGAAA+GGG | 0.515571 | 4_1:-15056547 | None:intergenic |
| TTCTCCACTACAAGGTGGCA+TGG | 0.516996 | 4_1:-15050169 | None:intergenic |
| AAAGAAGAAGGAGAATATAT+GGG | 0.517336 | 4_1:+15054650 | Msa0537190:CDS |
| AAGAATCGGTGGAGAAAATG+TGG | 0.519644 | 4_1:-15047780 | None:intergenic |
| AAACAACAATCTTTGACAGC+TGG | 0.523878 | 4_1:+15053145 | Msa0537190:CDS |
| TTCTAGTTTAAATCAGGGGA+TGG | 0.525203 | 4_1:+15050476 | Msa0537190:CDS |
| AAAAGAGGTCAGTGAAGAAT+CGG | 0.526045 | 4_1:-15047794 | None:intergenic |
| ATGACTACTATAGACTCTGC+TGG | 0.527721 | 4_1:+15050543 | Msa0537190:CDS |
| ATTTCTTCTCTTTCAGCAAG+TGG | 0.528393 | 4_1:-15054495 | None:intergenic |
| AAAACTTCAGCTTGAGTAGG+AGG | 0.531759 | 4_1:-15055515 | None:intergenic |
| AAAAGGAGGCACGCGACTTG+GGG | 0.532219 | 4_1:+15049858 | Msa0537190:CDS |
| CAAAGTTCTAGTTTAAATCA+GGG | 0.532231 | 4_1:+15050471 | Msa0537190:CDS |
| GAAACACGACAAAGTAAGAA+AGG | 0.532579 | 4_1:+15055542 | Msa0537190:CDS |
| AAAGAGATGGCAGCAATGGA+GGG | 0.533542 | 4_1:+15055929 | Msa0537190:CDS |
| AGGAAATTAATGATTTATTG+GGG | 0.533717 | 4_1:+15054926 | Msa0537190:CDS |
| CATAAGCTTTGCTATCATAA+GGG | 0.534866 | 4_1:+15055113 | Msa0537190:CDS |
| GAAAGTTCAATCCAAGTGGC+AGG | 0.536427 | 4_1:+15050765 | Msa0537190:CDS |
| TAAAAGAGAAGCTAATATCA+TGG | 0.537021 | 4_1:+15056623 | Msa0537190:three_prime_UTR |
| TTTGCGCAGATCCTGCCACT+TGG | 0.537377 | 4_1:-15050776 | None:intergenic |
| AGTGATAATGGTGATGTTGA+GGG | 0.539299 | 4_1:+15053801 | Msa0537190:CDS |
| AGAACAACATACCGACGACT+TGG | 0.539872 | 4_1:+15056404 | Msa0537190:CDS |
| GGAAGTTCAAGCCAAGTGGC+AGG | 0.540366 | 4_1:+15053166 | Msa0537190:CDS |
| TTCTCCACTAGAAGGTTGCA+TGG | 0.540379 | 4_1:-15052611 | None:intergenic |
| CCAAACTAGTGGGCCACTCT+CGG | 0.543416 | 4_1:+15051617 | Msa0537190:intron |
| CCACTAGAAGGTTGCATGGG+CGG | 0.543984 | 4_1:-15052607 | None:intergenic |
| AGGAGGCTCACAATCATCCT+TGG | 0.544300 | 4_1:-15055498 | None:intergenic |
| GTTGGTGATGGTGATGGTGA+GGG | 0.545120 | 4_1:+15051814 | Msa0537190:CDS |
| GAAGGCTATACCAAAGAAGA+AGG | 0.545383 | 4_1:+15054638 | Msa0537190:CDS |
| TAAAGAGATGGCAGCAATGG+AGG | 0.548073 | 4_1:+15055928 | Msa0537190:CDS |
| GTCATCTTCTTCCAAGTCGT+CGG | 0.550197 | 4_1:-15056415 | None:intergenic |
| TAGTAAAGAGATGGCAGCAA+TGG | 0.550552 | 4_1:+15055925 | Msa0537190:CDS |
| TCAGATTGACTCATCAATGC+TGG | 0.550681 | 4_1:+15056480 | Msa0537190:exon |
| TCTTACTTACACTAATTGGA+AGG | 0.551758 | 4_1:+15054620 | Msa0537190:CDS |
| AATTCAGAAAACAGCGATGA+GGG | 0.552902 | 4_1:+15053078 | Msa0537190:CDS |
| ATTAACTATGAAAATGATGA+TGG | 0.556975 | 4_1:+15051841 | Msa0537190:CDS |
| TTAATCCAACGAACTGAGAC+CGG | 0.557213 | 4_1:-15053635 | None:intergenic |
| TCTCCACTACAAGGTGGCAT+GGG | 0.557743 | 4_1:-15050168 | None:intergenic |
| AACCTACCACTTGAAGTTGA+GGG | 0.558153 | 4_1:+15053762 | Msa0537190:CDS |
| AATGAAGAAGGGGAGCCCAT+TGG | 0.560442 | 4_1:+15054525 | Msa0537190:CDS |
| CTTCTGGTATGTTGTCTGGA+CGG | 0.561123 | 4_1:-15054895 | None:intergenic |
| CAAAAGGACCTTGTCGATCG+TGG | 0.562659 | 4_1:+15051679 | Msa0537190:CDS |
| AAATCACCTTAAATGAAGAA+GGG | 0.563337 | 4_1:+15054514 | Msa0537190:CDS |
| AAACAACAATCATTGACAGC+TGG | 0.563591 | 4_1:+15050594 | Msa0537190:CDS |
| AGAATCGGTGGAGAAAATGT+GGG | 0.565457 | 4_1:-15047779 | None:intergenic |
| TAACCTACCACTTGAAGTTG+AGG | 0.568282 | 4_1:+15053761 | Msa0537190:CDS |
| TGTTGGTGATGGTGATGGTG+AGG | 0.568841 | 4_1:+15051813 | Msa0537190:CDS |
| CCGCCCATGCAACCTTCTAG+TGG | 0.573460 | 4_1:+15052607 | Msa0537190:CDS |
| AAACGACATCGTTATCGAGT+TGG | 0.573943 | 4_1:-15056667 | None:intergenic |
| AGTATGACAACTTGCGTGAG+CGG | 0.575926 | 4_1:+15054864 | Msa0537190:CDS |
| AAGTGATAATGGTGATGTTG+AGG | 0.576279 | 4_1:+15053800 | Msa0537190:CDS |
| CGACCCATGCCACCTTGTAG+TGG | 0.576903 | 4_1:+15050165 | Msa0537190:CDS |
| CTTGAGAATGGATCGATTAG+CGG | 0.577318 | 4_1:-15052927 | None:intergenic |
| TAAGCAACAACTTGAAGTTG+AGG | 0.580484 | 4_1:+15051768 | Msa0537190:CDS |
| ACCAATGACAATCCAATGGA+AGG | 0.580607 | 4_1:+15053858 | Msa0537190:CDS |
| ATAAACTATGAAAATGATGA+TGG | 0.581271 | 4_1:+15053828 | Msa0537190:CDS |
| ATATTCCAGAAAGTATAAAG+TGG | 0.583110 | 4_1:+15052807 | Msa0537190:CDS |
| CAGTTCTGCTCAATTTCAAG+AGG | 0.584026 | 4_1:+15053662 | Msa0537190:CDS |
| ACTAATGACACTCCAATGAA+AGG | 0.584851 | 4_1:+15051871 | Msa0537190:CDS |
| AAAGTAAATAAGGGAAAAGG+AGG | 0.587085 | 4_1:+15049844 | Msa0537190:CDS |
| ATCAACCATGAAAATGATGT+TGG | 0.588199 | 4_1:+15051796 | Msa0537190:CDS |
| GAAAACCAATGACAATCCAA+TGG | 0.589221 | 4_1:+15053854 | Msa0537190:CDS |
| CATGTTAATGTGAACAATGA+TGG | 0.596679 | 4_1:+15049928 | Msa0537190:CDS |
| ATATCACCCTCAACTTCAAG+TGG | 0.599635 | 4_1:-15053768 | None:intergenic |
| AAAGGAGGCACGCGACTTGG+GGG | 0.599733 | 4_1:+15049859 | Msa0537190:CDS |
| ATCCACCACCTAACCGAGAG+TGG | 0.601174 | 4_1:-15051630 | None:intergenic |
| AATCACCTTAAATGAAGAAG+GGG | 0.602115 | 4_1:+15054515 | Msa0537190:CDS |
| CATGAAAATGATGTTGGTGA+TGG | 0.604334 | 4_1:+15051802 | Msa0537190:CDS |
| AAAGTTCTAGTTTAAATCAG+GGG | 0.604848 | 4_1:+15050472 | Msa0537190:CDS |
| TAATAAATGATGCTTGGAGA+CGG | 0.606235 | 4_1:+15054807 | Msa0537190:CDS |
| AATGATGTTGGTGATGGTGA+TGG | 0.607681 | 4_1:+15051808 | Msa0537190:CDS |
| AAGGTGTTGTAACTCTTCCA+TGG | 0.608703 | 4_1:-15055781 | None:intergenic |
| GTGGGCCACTCTCGGTTAGG+TGG | 0.613865 | 4_1:+15051625 | Msa0537190:intron |
| GAATCGGTGGAGAAAATGTG+GGG | 0.615322 | 4_1:-15047778 | None:intergenic |
| TGACTACTATAGACTCTGCT+GGG | 0.622977 | 4_1:+15050544 | Msa0537190:CDS |
| ACCTGAAAGTTCAATCCAAG+TGG | 0.623688 | 4_1:+15050761 | Msa0537190:CDS |
| TGACAAGATTCAAGAAATGG+AGG | 0.626506 | 4_1:+15055874 | Msa0537190:CDS |
| AAATGATCATGTGACACTGA+GGG | 0.628187 | 4_1:-15051736 | None:intergenic |
| CCCAAAGATGATGTTTACAT+CGG | 0.630117 | 4_1:+15050129 | Msa0537190:CDS |
| AGAGGTCAGTGAAGAATCGG+TGG | 0.631061 | 4_1:-15047791 | None:intergenic |
| GCAATTCAGACCAAGATATG+GGG | 0.632072 | 4_1:+15055990 | Msa0537190:CDS |
| ACTTACGGTTCTCCACTACA+AGG | 0.637620 | 4_1:-15050177 | None:intergenic |
| TATGCTCGAGAATTCATGAT+CGG | 0.640321 | 4_1:+15054472 | Msa0537190:CDS |
| CACCCTCAACTTCAAGTGGT+AGG | 0.642167 | 4_1:-15053764 | None:intergenic |
| CCATTCTCAAGCATGATCAA+CGG | 0.642697 | 4_1:+15052939 | Msa0537190:CDS |
| AGCTGGAAGTTCAAGCCAAG+TGG | 0.642871 | 4_1:+15053162 | Msa0537190:CDS |
| CATTCATCTACATCTGCACA+TGG | 0.643873 | 4_1:+15056061 | Msa0537190:CDS |
| TCTCCACTAGAAGGTTGCAT+GGG | 0.644391 | 4_1:-15052610 | None:intergenic |
| AAATTCAGAAAACAGCGATG+AGG | 0.652388 | 4_1:+15053077 | Msa0537190:CDS |
| TGGAAGGTCCATGATCAACA+AGG | 0.654556 | 4_1:-15053686 | None:intergenic |
| AATCGGTGGAGAAAATGTGG+GGG | 0.657612 | 4_1:-15047777 | None:intergenic |
| CAATTCAGACCAAGATATGG+GGG | 0.664719 | 4_1:+15055991 | Msa0537190:CDS |
| CCATTCTCATGCATGACCTG+AGG | 0.667212 | 4_1:+15053122 | Msa0537190:CDS |
| AAAATGATCATGTGACACTG+AGG | 0.673161 | 4_1:-15051737 | None:intergenic |
| CTATGTGTAGCGTGCAACCA+AGG | 0.673476 | 4_1:+15055481 | Msa0537190:intron |
| AAGAGATGGCAGCAATGGAG+GGG | 0.675148 | 4_1:+15055930 | Msa0537190:CDS |
| ATTGTTGATATGTATCACAA+AGG | 0.675594 | 4_1:+15056750 | Msa0537190:three_prime_UTR |
| CCATTCTCATGCATGAACAA+CGG | 0.678870 | 4_1:+15053026 | Msa0537190:CDS |
| CCATTCTAAAGAATGACCAA+AGG | 0.692103 | 4_1:+15050721 | Msa0537190:CDS |
| TTGATCATGGACCTTCCAAG+AGG | 0.695593 | 4_1:+15053691 | Msa0537190:CDS |
| TGAATGATCCACGATCGACA+AGG | 0.696041 | 4_1:-15051687 | None:intergenic |
| TTTGGTTCTTGATAGAGACG+AGG | 0.701174 | 4_1:+15052545 | Msa0537190:intron |
| TACGGTTCTCCACTACAAGG+TGG | 0.728989 | 4_1:-15050174 | None:intergenic |
| TGAGAATGGATCGATTAGCG+GGG | 0.733161 | 4_1:-15052925 | None:intergenic |
| ACATGGCCTAAATAATAACG+AGG | 0.742221 | 4_1:+15056078 | Msa0537190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTTTTTTTTTTTTTTTG+AGG | + | chr4_1:15050294-15050313 | Msa0537190:intron | 10.0% |
| !!! | ATGTTTTTTTTTTTTTTTGA+GGG | + | chr4_1:15050295-15050314 | Msa0537190:intron | 10.0% |
| !!! | TTTTTGTTAGATTTTCTATT+TGG | + | chr4_1:15048377-15048396 | Msa0537190:intron | 15.0% |
| !! | ATAGAATAGAATAAAATTGA+AGG | - | chr4_1:15049293-15049312 | None:intergenic | 15.0% |
| !!! | TCAATTTTATTCTATTCTAT+AGG | + | chr4_1:15049293-15049312 | Msa0537190:intron | 15.0% |
| !!! | AAAAAATTGGAAGTTTTTAT+TGG | - | chr4_1:15049340-15049359 | None:intergenic | 15.0% |
| !! | AAATACATATATTAAATCAC+CGG | - | chr4_1:15050009-15050028 | None:intergenic | 15.0% |
| !!! | TTATACTTTTCAATTGATAA+AGG | + | chr4_1:15050361-15050380 | Msa0537190:intron | 15.0% |
| !! | TAAATAAATAGAATGAACAA+AGG | - | chr4_1:15054030-15054049 | None:intergenic | 15.0% |
| !! | TAAGGAAATTAATGATTTAT+TGG | + | chr4_1:15054924-15054943 | Msa0537190:CDS | 15.0% |
| !! | AAGGAAATTAATGATTTATT+GGG | + | chr4_1:15054925-15054944 | Msa0537190:CDS | 15.0% |
| !! | ATTAAATTCTATTACAAGTT+TGG | + | chr4_1:15055174-15055193 | Msa0537190:intron | 15.0% |
| !! | TCACTTAATGATGATAATAA+CGG | - | chr4_1:15047890-15047909 | None:intergenic | 20.0% |
| !!! | TAAAAAGTAGATTTTACCTT+TGG | + | chr4_1:15047931-15047950 | Msa0537190:intron | 20.0% |
| !!! | ATATTTCTGATTTGATCAAA+GGG | + | chr4_1:15048002-15048021 | Msa0537190:intron | 20.0% |
| !!! | GACTCTTTAGTTAATTTTTT+TGG | + | chr4_1:15048580-15048599 | Msa0537190:intron | 20.0% |
| !! | TAAAATTGAAGGATATTCAT+GGG | - | chr4_1:15049282-15049301 | None:intergenic | 20.0% |
| !! | ATAAAATTGAAGGATATTCA+TGG | - | chr4_1:15049283-15049302 | None:intergenic | 20.0% |
| !! | TTGTGGTAAGAAAAAAAAAT+TGG | - | chr4_1:15049353-15049372 | None:intergenic | 20.0% |
| !!! | AATTTTTTTTTCTTACCACA+AGG | + | chr4_1:15049352-15049371 | Msa0537190:intron | 20.0% |
| !! | ATATTATTCCTATTCTATCA+CGG | - | chr4_1:15049387-15049406 | None:intergenic | 20.0% |
| !! | TATCACAATGAAAGTAAATA+AGG | + | chr4_1:15049834-15049853 | Msa0537190:exon | 20.0% |
| !! | ATCACAATGAAAGTAAATAA+GGG | + | chr4_1:15049835-15049854 | Msa0537190:exon | 20.0% |
| !! | AAAACTGAATTATCAAAAGA+AGG | + | chr4_1:15050235-15050254 | Msa0537190:intron | 20.0% |
| !! | AAAACATAATGTGTTCTAAT+AGG | - | chr4_1:15050282-15050301 | None:intergenic | 20.0% |
| !! | GAAAGGAGTAATAAAAATAA+TGG | - | chr4_1:15050864-15050883 | None:intergenic | 20.0% |
| !! | TATTACAATTTACCATACAA+TGG | + | chr4_1:15051268-15051287 | Msa0537190:intron | 20.0% |
| !! | ATTAACTATGAAAATGATGA+TGG | + | chr4_1:15051841-15051860 | Msa0537190:CDS | 20.0% |
| !! | GAAACAAAATGAATATACAA+AGG | - | chr4_1:15052044-15052063 | None:intergenic | 20.0% |
| !! | TAATTCATATATGAAATCAG+AGG | + | chr4_1:15052208-15052227 | Msa0537190:intron | 20.0% |
| !!! | TTATACTTTTCAATTGAGAA+AGG | + | chr4_1:15052777-15052796 | Msa0537190:intron | 20.0% |
| !!! | TTTCACTTGTTTTATGTTTT+AGG | + | chr4_1:15053525-15053544 | Msa0537190:intron | 20.0% |
| !!! | TTCACTTGTTTTATGTTTTA+GGG | + | chr4_1:15053526-15053545 | Msa0537190:intron | 20.0% |
| !! | ATAAACTATGAAAATGATGA+TGG | + | chr4_1:15053828-15053847 | Msa0537190:CDS | 20.0% |
| !!! | ATTCTTTCTGTTTAAGTTAT+TGG | + | chr4_1:15054078-15054097 | Msa0537190:intron | 20.0% |
| !!! | CATATATAACTTGTTGATAT+TGG | + | chr4_1:15054395-15054414 | Msa0537190:intron | 20.0% |
| !! | AGGAAATTAATGATTTATTG+GGG | + | chr4_1:15054926-15054945 | Msa0537190:CDS | 20.0% |
| !! | ATTTAATTATTCGTCATTCA+GGG | - | chr4_1:15055414-15055433 | None:intergenic | 20.0% |
| !! | AATTTAATTATTCGTCATTC+AGG | - | chr4_1:15055415-15055434 | None:intergenic | 20.0% |
| !! | TAATTAAATTCTACTGTTAC+TGG | + | chr4_1:15055425-15055444 | Msa0537190:intron | 20.0% |
| !! | TTGAAAAGAAGTAAAGAAAT+TGG | + | chr4_1:15055809-15055828 | Msa0537190:CDS | 20.0% |
| !! | TAATTATTGTTGCAACTATA+AGG | - | chr4_1:15056112-15056131 | None:intergenic | 20.0% |
| !! | TTATTACATTCATTACCATA+AGG | + | chr4_1:15056129-15056148 | Msa0537190:intron | 20.0% |
| !!! | TGAACATTTTTCGTTTTTCA+AGG | - | chr4_1:15047723-15047742 | None:intergenic | 25.0% |
| ! | ATCTGAGAATCAATTGATTA+CGG | + | chr4_1:15047823-15047842 | Msa0537190:five_prime_UTR | 25.0% |
| ! | ATTTAGATAATTGTCATCAG+TGG | - | chr4_1:15047861-15047880 | None:intergenic | 25.0% |
| ! | AAAATCAAAACCTTAACCAA+AGG | - | chr4_1:15047950-15047969 | None:intergenic | 25.0% |
| ! | AAACATACACAGCAAAAAAT+GGG | - | chr4_1:15047974-15047993 | None:intergenic | 25.0% |
| ! | TAAACATACACAGCAAAAAA+TGG | - | chr4_1:15047975-15047994 | None:intergenic | 25.0% |
| !!! | TTTTTTGCTGTGTATGTTTA+AGG | + | chr4_1:15047975-15047994 | Msa0537190:intron | 25.0% |
| !! | GATATTTCTGATTTGATCAA+AGG | + | chr4_1:15048001-15048020 | Msa0537190:intron | 25.0% |
| ! | ACATGCATGAATCAAAATTA+TGG | - | chr4_1:15048074-15048093 | None:intergenic | 25.0% |
| ! | GTTGTGATACACAATATTAT+CGG | + | chr4_1:15048171-15048190 | Msa0537190:intron | 25.0% |
| !!! | TAGTACAAAGTATTGTCAAA+TGG | - | chr4_1:15048252-15048271 | None:intergenic | 25.0% |
| ! | ATTAAAAGGTAACTTTCGTA+TGG | + | chr4_1:15048452-15048471 | Msa0537190:intron | 25.0% |
| ! | TTCCTTAAACAATATCCTTA+GGG | + | chr4_1:15048544-15048563 | Msa0537190:intron | 25.0% |
| !!! | GAGATGCTTTCAATTTTTTT+TGG | + | chr4_1:15048686-15048705 | Msa0537190:intron | 25.0% |
| ! | ATTGTGTTGCAATAAAAAAG+TGG | - | chr4_1:15048903-15048922 | None:intergenic | 25.0% |
| !! | CTTTTATAAATGCAACTGAA+AGG | - | chr4_1:15049086-15049105 | None:intergenic | 25.0% |
| ! | AGTTGCATTTATAAAAGAGT+AGG | + | chr4_1:15049089-15049108 | Msa0537190:intron | 25.0% |
| ! | AATAATTGATTAGTGAGCTA+CGG | - | chr4_1:15049215-15049234 | None:intergenic | 25.0% |
| !!! | CACATTGTACTCATTTTTAT+CGG | - | chr4_1:15049246-15049265 | None:intergenic | 25.0% |
| ! | TTTATTCTATTCTATAGGAG+AGG | + | chr4_1:15049298-15049317 | Msa0537190:intron | 25.0% |
| !! | TGTTTTCATTTGTTTGATTG+TGG | + | chr4_1:15049569-15049588 | Msa0537190:intron | 25.0% |
| ! | ATGAAAGTAAATAAGGGAAA+AGG | + | chr4_1:15049841-15049860 | Msa0537190:CDS | 25.0% |
| !!! | TTGTTGAAAGTTTGTTTTTC+CGG | + | chr4_1:15049987-15050006 | Msa0537190:intron | 25.0% |
| !!! | TTTTGATAATTCAGTTTTGC+AGG | - | chr4_1:15050233-15050252 | None:intergenic | 25.0% |
| !!! | CAAAGTTCTAGTTTAAATCA+GGG | + | chr4_1:15050471-15050490 | Msa0537190:CDS | 25.0% |
| !!! | AAAGTTCTAGTTTAAATCAG+GGG | + | chr4_1:15050472-15050491 | Msa0537190:CDS | 25.0% |
| ! | AACATAAAAAACAAGATCAC+AGG | + | chr4_1:15050802-15050821 | Msa0537190:CDS | 25.0% |
| ! | AGATTGAGATACTATAAGTT+AGG | + | chr4_1:15050961-15050980 | Msa0537190:intron | 25.0% |
| ! | ACATAAAGTCAATAATAGAG+TGG | - | chr4_1:15051031-15051050 | None:intergenic | 25.0% |
| ! | TGAAATAGCAGTAATAACAA+TGG | - | chr4_1:15051112-15051131 | None:intergenic | 25.0% |
| ! | GTATGGTAAATTGTAATAGT+TGG | - | chr4_1:15051266-15051285 | None:intergenic | 25.0% |
| !! | TGTCACATGATCATTTTAAA+AGG | + | chr4_1:15051743-15051762 | Msa0537190:CDS | 25.0% |
| ! | TGAAACATAGTTAACTAGTA+GGG | - | chr4_1:15051903-15051922 | None:intergenic | 25.0% |
| ! | ATGAAACATAGTTAACTAGT+AGG | - | chr4_1:15051904-15051923 | None:intergenic | 25.0% |
| !!! | TTTTTGTTGTACATTCAGTT+AGG | + | chr4_1:15052159-15052178 | Msa0537190:intron | 25.0% |
| !!! | GGACAAAACTTCTTTTAAAA+GGG | + | chr4_1:15052442-15052461 | Msa0537190:intron | 25.0% |
| !!! | GACAAAACTTCTTTTAAAAG+GGG | + | chr4_1:15052443-15052462 | Msa0537190:intron | 25.0% |
| !!! | ACAAAACTTCTTTTAAAAGG+GGG | + | chr4_1:15052444-15052463 | Msa0537190:intron | 25.0% |
| ! | AATGTATATAGTAGATGACA+AGG | - | chr4_1:15052485-15052504 | None:intergenic | 25.0% |
| ! | AAAATAAAGAATTTGAGCTG+TGG | - | chr4_1:15052513-15052532 | None:intergenic | 25.0% |
| !!! | GTTCAATTTCTTGTTGTTTA+AGG | + | chr4_1:15052640-15052659 | Msa0537190:intron | 25.0% |
| !! | TGAGTTGAATTATCAAAAGA+AGG | + | chr4_1:15052687-15052706 | Msa0537190:intron | 25.0% |
| !! | ATATTCCAGAAAGTATAAAG+TGG | + | chr4_1:15052807-15052826 | Msa0537190:CDS | 25.0% |
| !!! | ATAAAGTGGATGTTTTTGAA+AGG | + | chr4_1:15052821-15052840 | Msa0537190:CDS | 25.0% |
| ! | AACCAAAAAATCAGAAAACA+AGG | + | chr4_1:15052888-15052907 | Msa0537190:CDS | 25.0% |
| !!! | ATCCTTGTTTTCTGATTTTT+TGG | - | chr4_1:15052893-15052912 | None:intergenic | 25.0% |
| !! | AATTTTTGCTTGGTTTAAAG+TGG | - | chr4_1:15053062-15053081 | None:intergenic | 25.0% |
| ! | AATAAAGGACAAGTAATGAT+TGG | - | chr4_1:15053251-15053270 | None:intergenic | 25.0% |
| ! | GAAAGGAGCAAATATAATAA+AGG | - | chr4_1:15053266-15053285 | None:intergenic | 25.0% |
| ! | TGTTGAAAAATCAAACTAGT+GGG | + | chr4_1:15053612-15053631 | Msa0537190:intron | 25.0% |
| !! | ATTAACTCTGAAAGTGATAA+TGG | + | chr4_1:15053789-15053808 | Msa0537190:CDS | 25.0% |
| !! | TTTCTGTTTAAGTTATTGGT+TGG | + | chr4_1:15054082-15054101 | Msa0537190:intron | 25.0% |
| ! | TTTCATTTGTACTTTCAGTT+AGG | + | chr4_1:15054126-15054145 | Msa0537190:intron | 25.0% |
| ! | TTCATTTGTACTTTCAGTTA+GGG | + | chr4_1:15054127-15054146 | Msa0537190:intron | 25.0% |
| ! | GATAGCATAAGAGATATATA+AGG | - | chr4_1:15054302-15054321 | None:intergenic | 25.0% |
| ! | TTGATATTGGAATGTATACT+AGG | + | chr4_1:15054408-15054427 | Msa0537190:intron | 25.0% |
| ! | TAGGAGAAACATCAAAAAAA+AGG | + | chr4_1:15054427-15054446 | Msa0537190:intron | 25.0% |
| ! | ACATCAAAAAAAAGGAAAAG+AGG | + | chr4_1:15054435-15054454 | Msa0537190:CDS | 25.0% |
| ! | AAATCACCTTAAATGAAGAA+GGG | + | chr4_1:15054514-15054533 | Msa0537190:CDS | 25.0% |
| !!! | TTCTGAATTCAGCAATTTTT+TGG | + | chr4_1:15054566-15054585 | Msa0537190:CDS | 25.0% |
| !!! | TCTGAATTCAGCAATTTTTT+GGG | + | chr4_1:15054567-15054586 | Msa0537190:CDS | 25.0% |
| ! | AAAGAAGAAGGAGAATATAT+GGG | + | chr4_1:15054650-15054669 | Msa0537190:CDS | 25.0% |
| ! | ATGCTATAATAAATGATGCT+TGG | + | chr4_1:15054801-15054820 | Msa0537190:CDS | 25.0% |
| ! | AATTATGAACACTTGTAGAA+TGG | + | chr4_1:15055281-15055300 | Msa0537190:intron | 25.0% |
| ! | AAAACTTACAATTGTGTTAC+TGG | - | chr4_1:15055588-15055607 | None:intergenic | 25.0% |
| !! | TAAAAAAAAGCATGCTATTG+AGG | + | chr4_1:15055838-15055857 | Msa0537190:CDS | 25.0% |
| ! | GAAAAAACATAGTAAAGAGA+TGG | + | chr4_1:15055916-15055935 | Msa0537190:CDS | 25.0% |
| ! | AACATACCTCGTTATTATTT+AGG | - | chr4_1:15056087-15056106 | None:intergenic | 25.0% |
| ! | TTCATTACCATAAGGAATAT+TGG | + | chr4_1:15056137-15056156 | Msa0537190:intron | 25.0% |
| !!! | TCTTAGTATTTTTATCCTGT+AGG | + | chr4_1:15056263-15056282 | Msa0537190:intron | 25.0% |
| ! | TAAAAGAGAAGCTAATATCA+TGG | + | chr4_1:15056623-15056642 | Msa0537190:three_prime_UTR | 25.0% |
| !!! | TAATATCATGGTGTGTTTTT+TGG | + | chr4_1:15056635-15056654 | Msa0537190:three_prime_UTR | 25.0% |
| ! | ATTGTTGATATGTATCACAA+AGG | + | chr4_1:15056750-15056769 | Msa0537190:three_prime_UTR | 25.0% |
| TTCTCAGATGAATTGAAAAG+AGG | - | chr4_1:15047812-15047831 | None:intergenic | 30.0% | |
| ! | GTAGATTTTACCTTTGGTTA+AGG | + | chr4_1:15047937-15047956 | Msa0537190:intron | 30.0% |
| GAATCAAAATTATGGTCAAG+AGG | - | chr4_1:15048066-15048085 | None:intergenic | 30.0% | |
| TTGTTAATAACAGCTATAGC+TGG | - | chr4_1:15048294-15048313 | None:intergenic | 30.0% | |
| ATAGCTGTTATTAACAACAC+TGG | + | chr4_1:15048297-15048316 | Msa0537190:intron | 30.0% | |
| GCATTGCTTAAGGAATTAAA+AGG | + | chr4_1:15048438-15048457 | Msa0537190:intron | 30.0% | |
| GTTCCTTAAACAATATCCTT+AGG | + | chr4_1:15048543-15048562 | Msa0537190:intron | 30.0% | |
| ! | TTTGGTAGCACAATATTATC+AGG | + | chr4_1:15048598-15048617 | Msa0537190:intron | 30.0% |
| AGCTATTACTTGATTAAGAC+TGG | - | chr4_1:15048640-15048659 | None:intergenic | 30.0% | |
| GTCTTAATCAAGTAATAGCT+AGG | + | chr4_1:15048640-15048659 | Msa0537190:intron | 30.0% | |
| !!! | TGCTTTCAATTTTTTTTGGC+CGG | + | chr4_1:15048690-15048709 | Msa0537190:intron | 30.0% |
| CAGATTCATCTACAAACATT+AGG | - | chr4_1:15048957-15048976 | None:intergenic | 30.0% | |
| AAAACGAGAAAAAGAAGTTG+TGG | + | chr4_1:15048996-15049015 | Msa0537190:intron | 30.0% | |
| AAGTCAAAACTTAGTGGTTT+AGG | + | chr4_1:15049114-15049133 | Msa0537190:intron | 30.0% | |
| AGTCAAAACTTAGTGGTTTA+GGG | + | chr4_1:15049115-15049134 | Msa0537190:intron | 30.0% | |
| TTATTCATGGGACTACTTTA+AGG | - | chr4_1:15049192-15049211 | None:intergenic | 30.0% | |
| TTGTATAACCGTGATAGAAT+AGG | + | chr4_1:15049376-15049395 | Msa0537190:intron | 30.0% | |
| !! | CAGTAGTTTTTGGAGAATAT+CGG | - | chr4_1:15049434-15049453 | None:intergenic | 30.0% |
| CACAACGGATCATTTAAAAA+AGG | - | chr4_1:15049630-15049649 | None:intergenic | 30.0% | |
| AGGTAACGAGTAAAAGAAAA+AGG | - | chr4_1:15049710-15049729 | None:intergenic | 30.0% | |
| CGTCAATTGAGTTTACTAAA+AGG | - | chr4_1:15049730-15049749 | None:intergenic | 30.0% | |
| !! | TTGCATTTGTGTTGATTTAC+AGG | + | chr4_1:15049802-15049821 | Msa0537190:intron | 30.0% |
| AAAGTAAATAAGGGAAAAGG+AGG | + | chr4_1:15049844-15049863 | Msa0537190:CDS | 30.0% | |
| CATGTTAATGTGAACAATGA+TGG | + | chr4_1:15049928-15049947 | Msa0537190:CDS | 30.0% | |
| GAGATAAATGTATATACCAG+AGG | - | chr4_1:15050065-15050084 | None:intergenic | 30.0% | |
| GAACCAAGAAATGAAACTTA+CGG | - | chr4_1:15050195-15050214 | None:intergenic | 30.0% | |
| TAAGTTTCATTTCTTGGTTC+AGG | + | chr4_1:15050195-15050214 | Msa0537190:intron | 30.0% | |
| ATGTGTTCTAATAGGTGAAA+AGG | - | chr4_1:15050274-15050293 | None:intergenic | 30.0% | |
| !!! | ATTTTGATTCAATTCAGCAG+AGG | - | chr4_1:15050415-15050434 | None:intergenic | 30.0% |
| !! | GCAAAGTTCTAGTTTAAATC+AGG | + | chr4_1:15050470-15050489 | Msa0537190:CDS | 30.0% |
| TCAATGATTGTTGTATCCTT+TGG | - | chr4_1:15050740-15050759 | None:intergenic | 30.0% | |
| ATGGACAAGTATGATTGAAA+AGG | - | chr4_1:15050845-15050864 | None:intergenic | 30.0% | |
| ATGAAGATTACAGTGATGAA+AGG | - | chr4_1:15050881-15050900 | None:intergenic | 30.0% | |
| AAAGTCAATAATAGAGTGGT+GGG | - | chr4_1:15051027-15051046 | None:intergenic | 30.0% | |
| TAAAGTCAATAATAGAGTGG+TGG | - | chr4_1:15051028-15051047 | None:intergenic | 30.0% | |
| TTATAGATTGCCAAACATAG+TGG | - | chr4_1:15051062-15051081 | None:intergenic | 30.0% | |
| !! | CTGCTATTTCAACTGTAAAA+TGG | + | chr4_1:15051121-15051140 | Msa0537190:intron | 30.0% |
| ! | CTCCAGGATTAGTATAAATA+GGG | + | chr4_1:15051145-15051164 | Msa0537190:intron | 30.0% |
| ! | TTTCCCCATACTTTATGTTT+TGG | + | chr4_1:15051525-15051544 | Msa0537190:intron | 30.0% |
| ! | TTCCCCATACTTTATGTTTT+GGG | + | chr4_1:15051526-15051545 | Msa0537190:intron | 30.0% |
| TACCCCAAAACATAAAGTAT+GGG | - | chr4_1:15051532-15051551 | None:intergenic | 30.0% | |
| ATACCCCAAAACATAAAGTA+TGG | - | chr4_1:15051533-15051552 | None:intergenic | 30.0% | |
| TGTTGAAAAACCAAACTAGT+GGG | + | chr4_1:15051607-15051626 | Msa0537190:intron | 30.0% | |
| ATCAACCATGAAAATGATGT+TGG | + | chr4_1:15051796-15051815 | Msa0537190:CDS | 30.0% | |
| GAAACATAGTTAACTAGTAG+GGG | - | chr4_1:15051902-15051921 | None:intergenic | 30.0% | |
| TATCATACGTATATCATCAG+TGG | - | chr4_1:15051955-15051974 | None:intergenic | 30.0% | |
| ATAGCACTATAGTAACAGAA+GGG | - | chr4_1:15051989-15052008 | None:intergenic | 30.0% | |
| ACTCTTTCTGTTTCAGTTAT+TGG | + | chr4_1:15052111-15052130 | Msa0537190:intron | 30.0% | |
| ACCTACTGAATGATACAAAA+GGG | - | chr4_1:15052188-15052207 | None:intergenic | 30.0% | |
| AACCTACTGAATGATACAAA+AGG | - | chr4_1:15052189-15052208 | None:intergenic | 30.0% | |
| TTCAGAATCATTTGTATACG+TGG | + | chr4_1:15052236-15052255 | Msa0537190:intron | 30.0% | |
| ! | AAATGTGTAGTAACTTGCAT+AGG | + | chr4_1:15052406-15052425 | Msa0537190:intron | 30.0% |
| ! | AATGTGTAGTAACTTGCATA+GGG | + | chr4_1:15052407-15052426 | Msa0537190:intron | 30.0% |
| ! | GGGACAAAACTTCTTTTAAA+AGG | + | chr4_1:15052441-15052460 | Msa0537190:intron | 30.0% |
| ACTAATGTAAACATCAGCTT+TGG | - | chr4_1:15052575-15052594 | None:intergenic | 30.0% | |
| AACATCCACTTTATACTTTC+TGG | - | chr4_1:15052815-15052834 | None:intergenic | 30.0% | |
| !!! | AAAGGATCTTTTTCAAAGCA+AGG | + | chr4_1:15052839-15052858 | Msa0537190:CDS | 30.0% |
| !!! | AAGGATCTTTTTCAAAGCAA+GGG | + | chr4_1:15052840-15052859 | Msa0537190:CDS | 30.0% |
| !!! | ATTTTTTGGTTGCTTTGAAG+TGG | - | chr4_1:15052879-15052898 | None:intergenic | 30.0% |
| ! | CTGTTTTCTGAATTTTTGCT+TGG | - | chr4_1:15053072-15053091 | None:intergenic | 30.0% |
| AACATAAAAAGCAAGATCAC+AGG | + | chr4_1:15053203-15053222 | Msa0537190:CDS | 30.0% | |
| TGTTAGTTAGTGCAACAAAA+TGG | - | chr4_1:15053421-15053440 | None:intergenic | 30.0% | |
| GTGTTGAAAAATCAAACTAG+TGG | + | chr4_1:15053611-15053630 | Msa0537190:intron | 30.0% | |
| TAATCATCAAGTGACATTGA+TGG | - | chr4_1:15053729-15053748 | None:intergenic | 30.0% | |
| TGAAACATAGTTGAGTAGTA+GGG | - | chr4_1:15053890-15053909 | None:intergenic | 30.0% | |
| ATGAAACATAGTTGAGTAGT+AGG | - | chr4_1:15053891-15053910 | None:intergenic | 30.0% | |
| CATATCATATGTGTCATATG+TGG | - | chr4_1:15053942-15053961 | None:intergenic | 30.0% | |
| CAGAAAGAATGAACAACAAA+GGG | - | chr4_1:15054068-15054087 | None:intergenic | 30.0% | |
| ACAGAAAGAATGAACAACAA+AGG | - | chr4_1:15054069-15054088 | None:intergenic | 30.0% | |
| ACCAACTGAATGATACAAAT+GGG | - | chr4_1:15054190-15054209 | None:intergenic | 30.0% | |
| AACCAACTGAATGATACAAA+TGG | - | chr4_1:15054191-15054210 | None:intergenic | 30.0% | |
| ! | TTTTTCTGCTATCAATCAGT+TGG | + | chr4_1:15054271-15054290 | Msa0537190:intron | 30.0% |
| AAAAAAAGGAAAAGAGGAAG+AGG | + | chr4_1:15054441-15054460 | Msa0537190:CDS | 30.0% | |
| GAAATCACCTTAAATGAAGA+AGG | + | chr4_1:15054513-15054532 | Msa0537190:CDS | 30.0% | |
| AATCACCTTAAATGAAGAAG+GGG | + | chr4_1:15054515-15054534 | Msa0537190:CDS | 30.0% | |
| !! | TCAGAAACTATCTTTTGAGT+TGG | - | chr4_1:15054552-15054571 | None:intergenic | 30.0% |
| TTCCAATTAGTGTAAGTAAG+AGG | - | chr4_1:15054621-15054640 | None:intergenic | 30.0% | |
| TCTTACTTACACTAATTGGA+AGG | + | chr4_1:15054620-15054639 | Msa0537190:CDS | 30.0% | |
| CATATATTCTCCTTCTTCTT+TGG | - | chr4_1:15054651-15054670 | None:intergenic | 30.0% | |
| CAAAGAAGAAGGAGAATATA+TGG | + | chr4_1:15054649-15054668 | Msa0537190:CDS | 30.0% | |
| AGATACATTGTTCCTGAAAA+AGG | + | chr4_1:15054764-15054783 | Msa0537190:CDS | 30.0% | |
| TAATAAATGATGCTTGGAGA+CGG | + | chr4_1:15054807-15054826 | Msa0537190:CDS | 30.0% | |
| ! | CATTGATGATTTCAGGAAAT+TGG | + | chr4_1:15055036-15055055 | Msa0537190:intron | 30.0% |
| CTTATGATAGCAAAGCTTAT+GGG | - | chr4_1:15055114-15055133 | None:intergenic | 30.0% | |
| ! | CATAAGCTTTGCTATCATAA+GGG | + | chr4_1:15055113-15055132 | Msa0537190:CDS | 30.0% |
| GATTTAAGTGCCAATAATAC+TGG | - | chr4_1:15055370-15055389 | None:intergenic | 30.0% | |
| ATAAAAACTTCAGCTTGAGT+AGG | - | chr4_1:15055521-15055540 | None:intergenic | 30.0% | |
| CAAGATTTGATCGTAAATTC+TGG | + | chr4_1:15055695-15055714 | Msa0537190:CDS | 30.0% | |
| !! | TTACTTCTTTTCAAGAGAGA+AGG | - | chr4_1:15055803-15055822 | None:intergenic | 30.0% |
| AAGTGACAAGATTCAAGAAA+TGG | + | chr4_1:15055871-15055890 | Msa0537190:CDS | 30.0% | |
| AATGCTTTATCTCTCAATGA+GGG | - | chr4_1:15056166-15056185 | None:intergenic | 30.0% | |
| TAATGCTTTATCTCTCAATG+AGG | - | chr4_1:15056167-15056186 | None:intergenic | 30.0% | |
| TTTATCCTGTAGGTAAATCA+TGG | + | chr4_1:15056273-15056292 | Msa0537190:intron | 30.0% | |
| TCATTTCCAAAGTCATCAAA+AGG | - | chr4_1:15056384-15056403 | None:intergenic | 30.0% | |
| TTATCAACCCAAAGTAGAAA+GGG | - | chr4_1:15056550-15056569 | None:intergenic | 30.0% | |
| ATTATCAACCCAAAGTAGAA+AGG | - | chr4_1:15056551-15056570 | None:intergenic | 30.0% | |
| ! | TACATCGAGCTTCTTTTTAT+AGG | + | chr4_1:15056583-15056602 | Msa0537190:three_prime_UTR | 30.0% |
| TGTGATACATATCAACAATC+TGG | - | chr4_1:15056749-15056768 | None:intergenic | 30.0% | |
| ! | ATGTATCACAAAGGTGATTT+TGG | + | chr4_1:15056759-15056778 | Msa0537190:three_prime_UTR | 30.0% |
| AAAAGAGGTCAGTGAAGAAT+CGG | - | chr4_1:15047797-15047816 | None:intergenic | 35.0% | |
| AAACTGGGCAATGTGAAAAT+TGG | - | chr4_1:15048038-15048057 | None:intergenic | 35.0% | |
| GACGACAAACAGTTATAAGA+AGG | - | chr4_1:15048136-15048155 | None:intergenic | 35.0% | |
| CTACTATGTTCAGGATTGTT+TGG | + | chr4_1:15048326-15048345 | Msa0537190:intron | 35.0% | |
| AAACGCTAACAAGTGTCTTT+AGG | + | chr4_1:15048415-15048434 | Msa0537190:intron | 35.0% | |
| AACGCTAACAAGTGTCTTTA+GGG | + | chr4_1:15048416-15048435 | Msa0537190:intron | 35.0% | |
| !!! | CAAGACTAGTTTTCCTTTCA+CGG | + | chr4_1:15048520-15048539 | Msa0537190:intron | 35.0% |
| !!! | AAGACTAGTTTTCCTTTCAC+GGG | + | chr4_1:15048521-15048540 | Msa0537190:intron | 35.0% |
| TGCCCTAAGGATATTGTTTA+AGG | - | chr4_1:15048549-15048568 | None:intergenic | 35.0% | |
| ATCTCACTATGATCGCTTTA+GGG | - | chr4_1:15048671-15048690 | None:intergenic | 35.0% | |
| !!! | AATTTTTTTTGGCCGGTAGA+CGG | + | chr4_1:15048697-15048716 | Msa0537190:intron | 35.0% |
| ! | GTTTGTGTGTGTAAGTTTTC+AGG | - | chr4_1:15048737-15048756 | None:intergenic | 35.0% |
| GTTGCAATAAAAAAGTGGCT+GGG | - | chr4_1:15048898-15048917 | None:intergenic | 35.0% | |
| TGTTGCAATAAAAAAGTGGC+TGG | - | chr4_1:15048899-15048918 | None:intergenic | 35.0% | |
| GAAGACAATTACATTGCCTA+TGG | - | chr4_1:15048931-15048950 | None:intergenic | 35.0% | |
| TAGGTCAAGTCAAAACTTAG+TGG | + | chr4_1:15049108-15049127 | Msa0537190:intron | 35.0% | |
| CTTAGTGGTTTAGGGAATAA+AGG | + | chr4_1:15049123-15049142 | Msa0537190:intron | 35.0% | |
| ! | ACTAACATTTTGCAGACCTA+AGG | - | chr4_1:15049159-15049178 | None:intergenic | 35.0% |
| ATTGCTAGATTATTGCGATG+TGG | - | chr4_1:15049463-15049482 | None:intergenic | 35.0% | |
| AGCAGAATATTGCAACACAA+CGG | - | chr4_1:15049645-15049664 | None:intergenic | 35.0% | |
| ACACACATACATTACACTCT+GGG | - | chr4_1:15049781-15049800 | None:intergenic | 35.0% | |
| TACACACATACATTACACTC+TGG | - | chr4_1:15049782-15049801 | None:intergenic | 35.0% | |
| CCGATGTAAACATCATCTTT+GGG | - | chr4_1:15050132-15050151 | None:intergenic | 35.0% | |
| CCCAAAGATGATGTTTACAT+CGG | + | chr4_1:15050129-15050148 | Msa0537190:CDS | 35.0% | |
| ACCGATGTAAACATCATCTT+TGG | - | chr4_1:15050133-15050152 | None:intergenic | 35.0% | |
| GAACCGTAAGTTTCATTTCT+TGG | + | chr4_1:15050189-15050208 | Msa0537190:intron | 35.0% | |
| !! | TTCTAGTTTAAATCAGGGGA+TGG | + | chr4_1:15050476-15050495 | Msa0537190:CDS | 35.0% |
| AAACAACAATCATTGACAGC+TGG | + | chr4_1:15050594-15050613 | Msa0537190:CDS | 35.0% | |
| ! | CCTTTGGTCATTCTTTAGAA+TGG | - | chr4_1:15050724-15050743 | None:intergenic | 35.0% |
| ! | CCATTCTAAAGAATGACCAA+AGG | + | chr4_1:15050721-15050740 | Msa0537190:CDS | 35.0% |
| ! | AAAAGGCATGTTTGAAAACC+TGG | - | chr4_1:15050828-15050847 | None:intergenic | 35.0% |
| CACTGTAATCTTCATTTGTG+AGG | + | chr4_1:15050886-15050905 | Msa0537190:intron | 35.0% | |
| AGCAACCAAAAACATCACAA+TGG | - | chr4_1:15050912-15050931 | None:intergenic | 35.0% | |
| !!! | TGTTTTTGGTTGCTACATTC+TGG | + | chr4_1:15050918-15050937 | Msa0537190:intron | 35.0% |
| CCTATTTATACTAATCCTGG+AGG | - | chr4_1:15051147-15051166 | None:intergenic | 35.0% | |
| ! | CCTCCAGGATTAGTATAAAT+AGG | + | chr4_1:15051144-15051163 | Msa0537190:intron | 35.0% |
| GTCCCTATTTATACTAATCC+TGG | - | chr4_1:15051150-15051169 | None:intergenic | 35.0% | |
| !! | TTGAACTTGTTAGTTAGTGC+AGG | - | chr4_1:15051359-15051378 | None:intergenic | 35.0% |
| ATGGAGGAAGTTTGTGTAAT+AGG | + | chr4_1:15051447-15051466 | Msa0537190:intron | 35.0% | |
| AGCATGAACAGTAAGTCAAT+AGG | - | chr4_1:15051503-15051522 | None:intergenic | 35.0% | |
| ! | TCCCCATACTTTATGTTTTG+GGG | + | chr4_1:15051527-15051546 | Msa0537190:intron | 35.0% |
| ACCCCAAAACATAAAGTATG+GGG | - | chr4_1:15051531-15051550 | None:intergenic | 35.0% | |
| GTAAGTCAGTAGCATAACAT+GGG | - | chr4_1:15051561-15051580 | None:intergenic | 35.0% | |
| AGTAAGTCAGTAGCATAACA+TGG | - | chr4_1:15051562-15051581 | None:intergenic | 35.0% | |
| GTGTTGAAAAACCAAACTAG+TGG | + | chr4_1:15051606-15051625 | Msa0537190:intron | 35.0% | |
| TTCTTCTGCTCAATTCCAAA+AGG | + | chr4_1:15051663-15051682 | Msa0537190:CDS | 35.0% | |
| AAATGATCATGTGACACTGA+GGG | - | chr4_1:15051739-15051758 | None:intergenic | 35.0% | |
| AAAATGATCATGTGACACTG+AGG | - | chr4_1:15051740-15051759 | None:intergenic | 35.0% | |
| TAAGCAACAACTTGAAGTTG+AGG | + | chr4_1:15051768-15051787 | Msa0537190:CDS | 35.0% | |
| ! | CATCACCAACATCATTTTCA+TGG | - | chr4_1:15051804-15051823 | None:intergenic | 35.0% |
| ! | CATGAAAATGATGTTGGTGA+TGG | + | chr4_1:15051802-15051821 | Msa0537190:CDS | 35.0% |
| ACTAATGACACTCCAATGAA+AGG | + | chr4_1:15051871-15051890 | Msa0537190:CDS | 35.0% | |
| CATAGCACTATAGTAACAGA+AGG | - | chr4_1:15051990-15052009 | None:intergenic | 35.0% | |
| CTTCTGTTACTATAGTGCTA+TGG | + | chr4_1:15051988-15052007 | Msa0537190:intron | 35.0% | |
| !!! | CTTCCTTGTTTCTACTGTTT+TGG | + | chr4_1:15052015-15052034 | Msa0537190:intron | 35.0% |
| CAGAAAGAGTGAACAGTAAA+GGG | - | chr4_1:15052101-15052120 | None:intergenic | 35.0% | |
| ACAGAAAGAGTGAACAGTAA+AGG | - | chr4_1:15052102-15052121 | None:intergenic | 35.0% | |
| CAGCAGTATATAGCAGAAAA+AGG | - | chr4_1:15052266-15052285 | None:intergenic | 35.0% | |
| ACTGCTGTGTATCATTCAAT+TGG | + | chr4_1:15052279-15052298 | Msa0537190:intron | 35.0% | |
| !!! | TACACGGTCATTTTTTGCTT+CGG | - | chr4_1:15052329-15052348 | None:intergenic | 35.0% |
| ! | ATGTGTAGTAACTTGCATAG+GGG | + | chr4_1:15052408-15052427 | Msa0537190:intron | 35.0% |
| TTGCATAGGGGCTTATATTT+AGG | + | chr4_1:15052420-15052439 | Msa0537190:intron | 35.0% | |
| TGCATAGGGGCTTATATTTA+GGG | + | chr4_1:15052421-15052440 | Msa0537190:intron | 35.0% | |
| TGATAATTCAACTCAGCCAA+TGG | - | chr4_1:15052682-15052701 | None:intergenic | 35.0% | |
| !!! | ATCTTTTTCAAAGCAAGGGA+TGG | + | chr4_1:15052844-15052863 | Msa0537190:CDS | 35.0% |
| AAATTCAGAAAACAGCGATG+AGG | + | chr4_1:15053077-15053096 | Msa0537190:CDS | 35.0% | |
| AATTCAGAAAACAGCGATGA+GGG | + | chr4_1:15053078-15053097 | Msa0537190:CDS | 35.0% | |
| !! | TCAAAGATTGTTGTTTCCTC+AGG | - | chr4_1:15053141-15053160 | None:intergenic | 35.0% |
| AAACAACAATCTTTGACAGC+TGG | + | chr4_1:15053145-15053164 | Msa0537190:CDS | 35.0% | |
| TAATGATTGGCAAAGCATGT+TGG | - | chr4_1:15053238-15053257 | None:intergenic | 35.0% | |
| ATGAAGATTGCAGTGATGAA+AGG | - | chr4_1:15053283-15053302 | None:intergenic | 35.0% | |
| AAAAAAGTAGCAGCCAACAA+TGG | - | chr4_1:15053314-15053333 | None:intergenic | 35.0% | |
| GTTGAGTACTATTACTACCA+TGG | + | chr4_1:15053337-15053356 | Msa0537190:intron | 35.0% | |
| GTTAGTGCAACAAAATGGTT+AGG | - | chr4_1:15053416-15053435 | None:intergenic | 35.0% | |
| !! | AAGTGATAATGGTGATGTTG+AGG | + | chr4_1:15053800-15053819 | Msa0537190:CDS | 35.0% |
| !! | AGTGATAATGGTGATGTTGA+GGG | + | chr4_1:15053801-15053820 | Msa0537190:CDS | 35.0% |
| GAAAACCAATGACAATCCAA+TGG | + | chr4_1:15053854-15053873 | Msa0537190:CDS | 35.0% | |
| GAAACATAGTTGAGTAGTAG+GGG | - | chr4_1:15053889-15053908 | None:intergenic | 35.0% | |
| ATCATATGTGTCATATGTGG+TGG | - | chr4_1:15053939-15053958 | None:intergenic | 35.0% | |
| !!! | CTCCTTGTTTTTGAATGCTT+TGG | + | chr4_1:15054001-15054020 | Msa0537190:intron | 35.0% |
| ! | CACCAAAGCATTCAAAAACA+AGG | - | chr4_1:15054006-15054025 | None:intergenic | 35.0% |
| !!! | CTTGTTTTTGAATGCTTTGG+TGG | + | chr4_1:15054004-15054023 | Msa0537190:intron | 35.0% |
| GGTTCCTCTTATCTATATTG+AGG | + | chr4_1:15054161-15054180 | Msa0537190:intron | 35.0% | |
| GCTACCTCAATATAGATAAG+AGG | - | chr4_1:15054168-15054187 | None:intergenic | 35.0% | |
| TATTCAGAATCATCTGCGTA+CGG | + | chr4_1:15054236-15054255 | Msa0537190:intron | 35.0% | |
| TATGCTCGAGAATTCATGAT+CGG | + | chr4_1:15054472-15054491 | Msa0537190:CDS | 35.0% | |
| ATTTCTTCTCTTTCAGCAAG+TGG | - | chr4_1:15054498-15054517 | None:intergenic | 35.0% | |
| !!! | ATCTTTTGAGTTGGACCAAT+GGG | - | chr4_1:15054543-15054562 | None:intergenic | 35.0% |
| !!! | TATCTTTTGAGTTGGACCAA+TGG | - | chr4_1:15054544-15054563 | None:intergenic | 35.0% |
| !!! | ATTTTTTGGGATCAGTAGCA+AGG | + | chr4_1:15054580-15054599 | Msa0537190:CDS | 35.0% |
| GTCCTCTTACTTACACTAAT+TGG | + | chr4_1:15054616-15054635 | Msa0537190:CDS | 35.0% | |
| AATTTCCTTAAGTCTGCTTC+TGG | - | chr4_1:15054914-15054933 | None:intergenic | 35.0% | |
| ! | TGACTCTCATTGATGATTTC+AGG | + | chr4_1:15055029-15055048 | Msa0537190:intron | 35.0% |
| ACAAAAATGTAGACATCGAG+CGG | + | chr4_1:15055086-15055105 | Msa0537190:CDS | 35.0% | |
| CCTTATGATAGCAAAGCTTA+TGG | - | chr4_1:15055115-15055134 | None:intergenic | 35.0% | |
| ! | CCATAAGCTTTGCTATCATA+AGG | + | chr4_1:15055112-15055131 | Msa0537190:CDS | 35.0% |
| TGCTATCATAAGGGAAAAAC+TGG | + | chr4_1:15055122-15055141 | Msa0537190:CDS | 35.0% | |
| CATAAAGAAGTCCATTCAGT+GGG | - | chr4_1:15055260-15055279 | None:intergenic | 35.0% | |
| TCATAAAGAAGTCCATTCAG+TGG | - | chr4_1:15055261-15055280 | None:intergenic | 35.0% | |
| ! | TTCTGATGTTGGTGAAGAAA+TGG | + | chr4_1:15055333-15055352 | Msa0537190:intron | 35.0% |
| ! | ATGTTGGTGAAGAAATGGAT+GGG | + | chr4_1:15055338-15055357 | Msa0537190:intron | 35.0% |
| CTGGTGATTTCTACTACTAT+TGG | + | chr4_1:15055444-15055463 | Msa0537190:intron | 35.0% | |
| GAAACACGACAAAGTAAGAA+AGG | + | chr4_1:15055542-15055561 | Msa0537190:CDS | 35.0% | |
| ! | CAATTGTGTTACTGGTAACT+TGG | - | chr4_1:15055580-15055599 | None:intergenic | 35.0% |
| ! | GAAGCATTTCGAACTATCTT+CGG | + | chr4_1:15055731-15055750 | Msa0537190:CDS | 35.0% |
| ATCTTCGGTAAAGAAAAACC+TGG | + | chr4_1:15055746-15055765 | Msa0537190:CDS | 35.0% | |
| TGACAAGATTCAAGAAATGG+AGG | + | chr4_1:15055874-15055893 | Msa0537190:CDS | 35.0% | |
| GGAGGTAAAACATGAAAAGA+TGG | + | chr4_1:15055892-15055911 | Msa0537190:CDS | 35.0% | |
| GGAAATTGCAAGTTCTTCTT+AGG | + | chr4_1:15055951-15055970 | Msa0537190:CDS | 35.0% | |
| TATCTTGGTCTGAATTGCTT+TGG | - | chr4_1:15055988-15056007 | None:intergenic | 35.0% | |
| AAGCAATTCAGACCAAGATA+TGG | + | chr4_1:15055988-15056007 | Msa0537190:CDS | 35.0% | |
| AGCAATTCAGACCAAGATAT+GGG | + | chr4_1:15055989-15056008 | Msa0537190:CDS | 35.0% | |
| ACCCCAAATGATGACAATAA+TGG | + | chr4_1:15056034-15056053 | Msa0537190:CDS | 35.0% | |
| CCCATTATTGTCATCATTTG+GGG | - | chr4_1:15056038-15056057 | None:intergenic | 35.0% | |
| CCCCAAATGATGACAATAAT+GGG | + | chr4_1:15056035-15056054 | Msa0537190:CDS | 35.0% | |
| GCCCATTATTGTCATCATTT+GGG | - | chr4_1:15056039-15056058 | None:intergenic | 35.0% | |
| AGCCCATTATTGTCATCATT+TGG | - | chr4_1:15056040-15056059 | None:intergenic | 35.0% | |
| ACATGGCCTAAATAATAACG+AGG | + | chr4_1:15056078-15056097 | Msa0537190:CDS | 35.0% | |
| CATCAGACAATTGTTCTTCA+AGG | - | chr4_1:15056299-15056318 | None:intergenic | 35.0% | |
| !! | AGAACAACCTTTTGATGACT+TGG | + | chr4_1:15056338-15056357 | Msa0537190:CDS | 35.0% |
| TCATCTTCCAAGTCATCAAA+AGG | - | chr4_1:15056348-15056367 | None:intergenic | 35.0% | |
| ! | AAGACCAATCTTTTCATGAC+TGG | + | chr4_1:15056439-15056458 | Msa0537190:CDS | 35.0% |
| ! | AGACCAATCTTTTCATGACT+GGG | + | chr4_1:15056440-15056459 | Msa0537190:CDS | 35.0% |
| AACCTTATCCCTTTCTACTT+TGG | + | chr4_1:15056539-15056558 | Msa0537190:three_prime_UTR | 35.0% | |
| ACCTTATCCCTTTCTACTTT+GGG | + | chr4_1:15056540-15056559 | Msa0537190:three_prime_UTR | 35.0% | |
| !!! | ACAAAGGTGATTTTGGAGTT+TGG | + | chr4_1:15056766-15056785 | Msa0537190:three_prime_UTR | 35.0% |
| AGAATCGGTGGAGAAAATGT+GGG | - | chr4_1:15047782-15047801 | None:intergenic | 40.0% | |
| AAGAATCGGTGGAGAAAATG+TGG | - | chr4_1:15047783-15047802 | None:intergenic | 40.0% | |
| ATGCAACAGTCGTGATTCAA+GGG | - | chr4_1:15048106-15048125 | None:intergenic | 40.0% | |
| AATGCAACAGTCGTGATTCA+AGG | - | chr4_1:15048107-15048126 | None:intergenic | 40.0% | |
| TGGTGATAGCTACTATGTTC+AGG | + | chr4_1:15048317-15048336 | Msa0537190:intron | 40.0% | |
| !! | TGTCTTTAGGGCATTGCTTA+AGG | + | chr4_1:15048428-15048447 | Msa0537190:intron | 40.0% |
| ! | CGTGAAAGGAAAACTAGTCT+TGG | - | chr4_1:15048522-15048541 | None:intergenic | 40.0% |
| TTGTTTAAGGAACCCGTGAA+AGG | - | chr4_1:15048536-15048555 | None:intergenic | 40.0% | |
| TCATACTAACAAGTGCCCTA+AGG | - | chr4_1:15048562-15048581 | None:intergenic | 40.0% | |
| CATCTCACTATGATCGCTTT+AGG | - | chr4_1:15048672-15048691 | None:intergenic | 40.0% | |
| GTTAGGCAGGACATTTATTG+TGG | - | chr4_1:15048800-15048819 | None:intergenic | 40.0% | |
| AATGTCCTGCCTAACAATCT+CGG | + | chr4_1:15048805-15048824 | Msa0537190:intron | 40.0% | |
| ! | ATGGCACTATAGTCTAAGGT+TGG | - | chr4_1:15048869-15048888 | None:intergenic | 40.0% |
| CAGTATGGCACTATAGTCTA+AGG | - | chr4_1:15048873-15048892 | None:intergenic | 40.0% | |
| TGCAACACAATCATCACCAT+AGG | + | chr4_1:15048912-15048931 | Msa0537190:intron | 40.0% | |
| TAAAGGACTGACGTTTCCTT+AGG | + | chr4_1:15049140-15049159 | Msa0537190:intron | 40.0% | |
| AGTGAGCTACGGTTATTCAT+GGG | - | chr4_1:15049204-15049223 | None:intergenic | 40.0% | |
| TAGTGAGCTACGGTTATTCA+TGG | - | chr4_1:15049205-15049224 | None:intergenic | 40.0% | |
| TATTCTATAGGAGAGGCAAC+AGG | + | chr4_1:15049305-15049324 | Msa0537190:intron | 40.0% | |
| ! | GTGGAGTCTTCAGTAGTTTT+TGG | - | chr4_1:15049444-15049463 | None:intergenic | 40.0% |
| TCCTCTGCTTTAGTTGTTCT+TGG | + | chr4_1:15049497-15049516 | Msa0537190:intron | 40.0% | |
| TGATTGTGGTTACACCCTAT+TGG | + | chr4_1:15049583-15049602 | Msa0537190:intron | 40.0% | |
| AGCACAACATGACACCAATA+GGG | - | chr4_1:15049600-15049619 | None:intergenic | 40.0% | |
| AAGCACAACATGACACCAAT+AGG | - | chr4_1:15049601-15049620 | None:intergenic | 40.0% | |
| !! | TTACACTCTGGGATTTCTCT+TGG | - | chr4_1:15049770-15049789 | None:intergenic | 40.0% |
| AAGAAAGAAAGAAACGGTGG+TGG | - | chr4_1:15050040-15050059 | None:intergenic | 40.0% | |
| ACCACCGTTTCTTTCTTTCT+TGG | + | chr4_1:15050039-15050058 | Msa0537190:intron | 40.0% | |
| GAGGCCAAGAAAGAAAGAAA+CGG | - | chr4_1:15050046-15050065 | None:intergenic | 40.0% | |
| TTTCTTTCTTTCTTGGCCTC+TGG | + | chr4_1:15050046-15050065 | Msa0537190:intron | 40.0% | |
| ATGACTACTATAGACTCTGC+TGG | + | chr4_1:15050543-15050562 | Msa0537190:CDS | 40.0% | |
| TGACTACTATAGACTCTGCT+GGG | + | chr4_1:15050544-15050563 | Msa0537190:CDS | 40.0% | |
| CGTTTGATCATGCTTGAGAA+TGG | - | chr4_1:15050574-15050593 | None:intergenic | 40.0% | |
| ACCTGAAAGTTCAATCCAAG+TGG | + | chr4_1:15050761-15050780 | Msa0537190:CDS | 40.0% | |
| AAAAAACAAGATCACAGGCC+AGG | + | chr4_1:15050807-15050826 | Msa0537190:CDS | 40.0% | |
| ! | TGAGGCCATTGTGATGTTTT+TGG | + | chr4_1:15050904-15050923 | Msa0537190:intron | 40.0% |
| ! | TCAATAATAGAGTGGTGGGA+TGG | - | chr4_1:15051023-15051042 | None:intergenic | 40.0% |
| GTCAATCAAGCCACTATGTT+TGG | + | chr4_1:15051049-15051068 | Msa0537190:intron | 40.0% | |
| !!! | CCAGGTTTTGAACCATTGTA+TGG | - | chr4_1:15051283-15051302 | None:intergenic | 40.0% |
| CCATACAATGGTTCAAAACC+TGG | + | chr4_1:15051280-15051299 | Msa0537190:intron | 40.0% | |
| AAAAGCCTAGTCCAAGTCAT+AGG | - | chr4_1:15051306-15051325 | None:intergenic | 40.0% | |
| GTTAGTGCAGGAAGAAAGAT+GGG | - | chr4_1:15051347-15051366 | None:intergenic | 40.0% | |
| AGTTAGTGCAGGAAGAAAGA+TGG | - | chr4_1:15051348-15051367 | None:intergenic | 40.0% | |
| ! | AGAGAGTGCACGTTTGAAAA+TGG | + | chr4_1:15051428-15051447 | Msa0537190:intron | 40.0% |
| !! | AATGATGTTGGTGATGGTGA+TGG | + | chr4_1:15051808-15051827 | Msa0537190:CDS | 40.0% |
| CCACCAAAACAGTAGAAACA+AGG | - | chr4_1:15052021-15052040 | None:intergenic | 40.0% | |
| !!! | CCTTGTTTCTACTGTTTTGG+TGG | + | chr4_1:15052018-15052037 | Msa0537190:intron | 40.0% |
| ! | GCCCTTTTGTATCATTCAGT+AGG | + | chr4_1:15052184-15052203 | Msa0537190:intron | 40.0% |
| !! | TTTGGTTCTTGATAGAGACG+AGG | + | chr4_1:15052545-15052564 | Msa0537190:intron | 40.0% |
| ACTTACAGTTCTCCACTAGA+AGG | - | chr4_1:15052622-15052641 | None:intergenic | 40.0% | |
| TTGAGAATGGATCGATTAGC+GGG | - | chr4_1:15052929-15052948 | None:intergenic | 40.0% | |
| CTTGAGAATGGATCGATTAG+CGG | - | chr4_1:15052930-15052949 | None:intergenic | 40.0% | |
| CCATTCTCAAGCATGATCAA+CGG | + | chr4_1:15050571-15050590 | Msa0537190:CDS | 40.0% | |
| !!! | ATTTTTCGCTTGCTGTGAAG+TGG | - | chr4_1:15052975-15052994 | None:intergenic | 40.0% |
| CCATTCTCATGCATGAACAA+CGG | + | chr4_1:15053026-15053045 | Msa0537190:CDS | 40.0% | |
| CACTGCAATCTTCATTTGTG+AGG | + | chr4_1:15053288-15053307 | Msa0537190:intron | 40.0% | |
| TTCATTTGTGAGGCCATTGT+TGG | + | chr4_1:15050896-15050915 | Msa0537190:intron | 40.0% | |
| TACTACCATGGTTCAAAACC+TGG | + | chr4_1:15053349-15053368 | Msa0537190:intron | 40.0% | |
| ! | GAAAAATCAAACTAGTGGGC+CGG | + | chr4_1:15053616-15053635 | Msa0537190:intron | 40.0% |
| TTAATCCAACGAACTGAGAC+CGG | - | chr4_1:15053638-15053657 | None:intergenic | 40.0% | |
| CAGTTCTGCTCAATTTCAAG+AGG | + | chr4_1:15053662-15053681 | Msa0537190:CDS | 40.0% | |
| ! | AACTTCTTTTGCCTCTTGGA+AGG | - | chr4_1:15053705-15053724 | None:intergenic | 40.0% |
| ! | TGGTAACTTCTTTTGCCTCT+TGG | - | chr4_1:15053709-15053728 | None:intergenic | 40.0% |
| TAACCTACCACTTGAAGTTG+AGG | + | chr4_1:15053761-15053780 | Msa0537190:CDS | 40.0% | |
| AACCTACCACTTGAAGTTGA+GGG | + | chr4_1:15053762-15053781 | Msa0537190:CDS | 40.0% | |
| ATATCACCCTCAACTTCAAG+TGG | - | chr4_1:15053771-15053790 | None:intergenic | 40.0% | |
| ACCAATGACAATCCAATGGA+AGG | + | chr4_1:15053858-15053877 | Msa0537190:CDS | 40.0% | |
| ACCTTCCATTGGATTGTCAT+TGG | - | chr4_1:15053862-15053881 | None:intergenic | 40.0% | |
| ! | ATGTGGTGGTGATGATGAAA+TGG | - | chr4_1:15053925-15053944 | None:intergenic | 40.0% |
| ! | CTTTTGTTACTACAGTGCTC+TGG | + | chr4_1:15053973-15053992 | Msa0537190:intron | 40.0% |
| !! | GTTATTGGTTGGCTTTCTGT+TGG | + | chr4_1:15054093-15054112 | Msa0537190:intron | 40.0% |
| TTCAGTTAGGGTCCTATTGT+TGG | + | chr4_1:15054139-15054158 | Msa0537190:intron | 40.0% | |
| TCAGTTAGGGTCCTATTGTT+GGG | + | chr4_1:15054140-15054159 | Msa0537190:intron | 40.0% | |
| GATAAGAGGAACCCAACAAT+AGG | - | chr4_1:15054154-15054173 | None:intergenic | 40.0% | |
| GCCCATTTGTATCATTCAGT+TGG | + | chr4_1:15054186-15054205 | Msa0537190:intron | 40.0% | |
| GAAGGCTATACCAAAGAAGA+AGG | + | chr4_1:15054638-15054657 | Msa0537190:CDS | 40.0% | |
| TGTTCCTGAAAAAGGAGAGA+AGG | + | chr4_1:15054772-15054791 | Msa0537190:CDS | 40.0% | |
| ACATACCAGAAGCAGACTTA+AGG | + | chr4_1:15054906-15054925 | Msa0537190:CDS | 40.0% | |
| CAAAAATGTAGACATCGAGC+GGG | + | chr4_1:15055087-15055106 | Msa0537190:CDS | 40.0% | |
| !!! | ACTACTGATTTTTTGCCACC+CGG | + | chr4_1:15055199-15055218 | Msa0537190:intron | 40.0% |
| TGGGACTAAAATCCAAGCTT+CGG | - | chr4_1:15055241-15055260 | None:intergenic | 40.0% | |
| !! | TGGATTTTAGTCCCACTGAA+TGG | + | chr4_1:15055246-15055265 | Msa0537190:intron | 40.0% |
| ! | GATGTTGGTGAAGAAATGGA+TGG | + | chr4_1:15055337-15055356 | Msa0537190:intron | 40.0% |
| TGGGATGACTCCAGTATTAT+TGG | + | chr4_1:15055357-15055376 | Msa0537190:intron | 40.0% | |
| AAAACTTCAGCTTGAGTAGG+AGG | - | chr4_1:15055518-15055537 | None:intergenic | 40.0% | |
| CGTAAATTCTGGTCAGTCTT+CGG | + | chr4_1:15055706-15055725 | Msa0537190:CDS | 40.0% | |
| !! | AAGGTGTTGTAACTCTTCCA+TGG | - | chr4_1:15055784-15055803 | None:intergenic | 40.0% |
| TAGTAAAGAGATGGCAGCAA+TGG | + | chr4_1:15055925-15055944 | Msa0537190:CDS | 40.0% | |
| GCAATTCAGACCAAGATATG+GGG | + | chr4_1:15055990-15056009 | Msa0537190:CDS | 40.0% | |
| CAATTCAGACCAAGATATGG+GGG | + | chr4_1:15055991-15056010 | Msa0537190:CDS | 40.0% | |
| CATTCATCTACATCTGCACA+TGG | + | chr4_1:15056061-15056080 | Msa0537190:CDS | 40.0% | |
| AGGGTGACCAATATTCCTTA+TGG | - | chr4_1:15056147-15056166 | None:intergenic | 40.0% | |
| !! | GAGCAACCTTTTGATGACTT+TGG | + | chr4_1:15056375-15056394 | Msa0537190:CDS | 40.0% |
| CTTCCCAGTCATGAAAAGAT+TGG | - | chr4_1:15056446-15056465 | None:intergenic | 40.0% | |
| ! | TCAGATTGACTCATCAATGC+TGG | + | chr4_1:15056480-15056499 | Msa0537190:exon | 40.0% |
| ACCCAAAGTAGAAAGGGATA+AGG | - | chr4_1:15056544-15056563 | None:intergenic | 40.0% | |
| AAACGACATCGTTATCGAGT+TGG | - | chr4_1:15056670-15056689 | None:intergenic | 40.0% | |
| AACTCGATAACGATGTCGTT+TGG | + | chr4_1:15056669-15056688 | Msa0537190:three_prime_UTR | 40.0% | |
| AATCGGTGGAGAAAATGTGG+GGG | - | chr4_1:15047780-15047799 | None:intergenic | 45.0% | |
| GAATCGGTGGAGAAAATGTG+GGG | - | chr4_1:15047781-15047800 | None:intergenic | 45.0% | |
| GGCAATGTGAAAATTGGAGG+AGG | - | chr4_1:15048032-15048051 | None:intergenic | 45.0% | |
| CTGGGCAATGTGAAAATTGG+AGG | - | chr4_1:15048035-15048054 | None:intergenic | 45.0% | |
| ! | GGTCAAGAGGTGCAAAAACT+GGG | - | chr4_1:15048053-15048072 | None:intergenic | 45.0% |
| ! | TGGTCAAGAGGTGCAAAAAC+TGG | - | chr4_1:15048054-15048073 | None:intergenic | 45.0% |
| TGGAAGCTATAGTGTCGCAA+TGG | - | chr4_1:15048232-15048251 | None:intergenic | 45.0% | |
| ATAGCTGGACTGTTCTGTGA+CGG | - | chr4_1:15048279-15048298 | None:intergenic | 45.0% | |
| !! | ACTATGATCGCTTTAGGGAG+TGG | - | chr4_1:15048666-15048685 | None:intergenic | 45.0% |
| AGAGATCCCGTGTTTGAACA+CGG | + | chr4_1:15048770-15048789 | Msa0537190:intron | 45.0% | |
| TGGTTACCCGTGTTCAAACA+CGG | - | chr4_1:15048780-15048799 | None:intergenic | 45.0% | |
| AGCTAGGTCTTACGGACAAA+TGG | + | chr4_1:15048840-15048859 | Msa0537190:intron | 45.0% | |
| AAAAGTGGCTGGGATCAGTA+TGG | - | chr4_1:15048888-15048907 | None:intergenic | 45.0% | |
| !! | GGGACTACTTTAAGGTTGTG+TGG | - | chr4_1:15049184-15049203 | None:intergenic | 45.0% |
| TCACGGTTATACAAGCCTTG+TGG | - | chr4_1:15049370-15049389 | None:intergenic | 45.0% | |
| GCCAAGAACAACTAAAGCAG+AGG | - | chr4_1:15049501-15049520 | None:intergenic | 45.0% | |
| CGTAATATTACCAGCTGCAG+AGG | + | chr4_1:15049666-15049685 | Msa0537190:intron | 45.0% | |
| GCCAAGAAAGAAAGAAACGG+TGG | - | chr4_1:15050043-15050062 | None:intergenic | 45.0% | |
| ACTTACGGTTCTCCACTACA+AGG | - | chr4_1:15050180-15050199 | None:intergenic | 45.0% | |
| GCAGAGGACTTTGTAATGTC+TGG | - | chr4_1:15050399-15050418 | None:intergenic | 45.0% | |
| GGAAGATCAATCCAAGTTGC+AGG | + | chr4_1:15050615-15050634 | Msa0537190:CDS | 45.0% | |
| TTTGAGCAGATCCTGCAACT+TGG | - | chr4_1:15050629-15050648 | None:intergenic | 45.0% | |
| GCCACTTGGATTGAACTTTC+AGG | - | chr4_1:15050765-15050784 | None:intergenic | 45.0% | |
| GAAAGTTCAATCCAAGTGGC+AGG | + | chr4_1:15050765-15050784 | Msa0537190:CDS | 45.0% | |
| ATGGAGAAGCTAGCATGGTA+TGG | - | chr4_1:15051004-15051023 | None:intergenic | 45.0% | |
| TCAACTGTAAAATGGCCTCC+AGG | + | chr4_1:15051129-15051148 | Msa0537190:intron | 45.0% | |
| CTCATTTGAGAGCTAGAGAG+TGG | + | chr4_1:15051220-15051239 | Msa0537190:intron | 45.0% | |
| ! | CTAGAGAGTGGATTCTCTCT+TGG | + | chr4_1:15051232-15051251 | Msa0537190:intron | 45.0% |
| TCAAAACCTGGCCTATGACT+TGG | + | chr4_1:15051292-15051311 | Msa0537190:intron | 45.0% | |
| GAGTGCACGTTTGAAAATGG+AGG | + | chr4_1:15051431-15051450 | Msa0537190:intron | 45.0% | |
| TGAATGATCCACGATCGACA+AGG | - | chr4_1:15051690-15051709 | None:intergenic | 45.0% | |
| TGTGACACTGAGGGAATCTT+TGG | - | chr4_1:15051730-15051749 | None:intergenic | 45.0% | |
| !! | GTAGGGGTGTTACCTTTCAT+TGG | - | chr4_1:15051886-15051905 | None:intergenic | 45.0% |
| GCAGACACATCGTTTGTACA+CGG | - | chr4_1:15052345-15052364 | None:intergenic | 45.0% | |
| TCTCCACTAGAAGGTTGCAT+GGG | - | chr4_1:15052613-15052632 | None:intergenic | 45.0% | |
| TTCTCCACTAGAAGGTTGCA+TGG | - | chr4_1:15052614-15052633 | None:intergenic | 45.0% | |
| AATTCAACTCAGCCAATGGC+TGG | - | chr4_1:15052678-15052697 | None:intergenic | 45.0% | |
| TGAGAATGGATCGATTAGCG+GGG | - | chr4_1:15052928-15052947 | None:intergenic | 45.0% | |
| CCGTTGATCATGCTTGAGAA+TGG | - | chr4_1:15052942-15052961 | None:intergenic | 45.0% | |
| CCGTTGTTCATGCATGAGAA+TGG | - | chr4_1:15053029-15053048 | None:intergenic | 45.0% | |
| AAAAAGCAAGATCACAGGCC+AGG | + | chr4_1:15053208-15053227 | Msa0537190:CDS | 45.0% | |
| GCAAAGCATGTTGGAAAACC+TGG | - | chr4_1:15053229-15053248 | None:intergenic | 45.0% | |
| !!! | ACATGCCAGGTTTTGAACCA+TGG | - | chr4_1:15053357-15053376 | None:intergenic | 45.0% |
| TGTAGTCAAAGTCACATGCC+AGG | - | chr4_1:15053370-15053389 | None:intergenic | 45.0% | |
| CAAGAGGACCTTGTTGATCA+TGG | + | chr4_1:15053678-15053697 | Msa0537190:CDS | 45.0% | |
| TGGAAGGTCCATGATCAACA+AGG | - | chr4_1:15053689-15053708 | None:intergenic | 45.0% | |
| TTGATCATGGACCTTCCAAG+AGG | + | chr4_1:15053691-15053710 | Msa0537190:CDS | 45.0% | |
| GCAGACACATCGTTTGTACA+TGG | - | chr4_1:15052345-15052364 | None:intergenic | 45.0% | |
| ! | ACAGCCTTCTCTCCTTTTTC+AGG | - | chr4_1:15054779-15054798 | None:intergenic | 45.0% |
| AGTATGACAACTTGCGTGAG+CGG | + | chr4_1:15054864-15054883 | Msa0537190:CDS | 45.0% | |
| CTTCTGGTATGTTGTCTGGA+CGG | - | chr4_1:15054898-15054917 | None:intergenic | 45.0% | |
| TCTGCTTCTGGTATGTTGTC+TGG | - | chr4_1:15054902-15054921 | None:intergenic | 45.0% | |
| !!! | CTACTGATTTTTTGCCACCC+GGG | + | chr4_1:15055200-15055219 | Msa0537190:intron | 45.0% |
| !!! | TACTGATTTTTTGCCACCCG+GGG | + | chr4_1:15055201-15055220 | Msa0537190:intron | 45.0% |
| CAGAATGTTCCCCTAGTAGT+TGG | - | chr4_1:15055318-15055337 | None:intergenic | 45.0% | |
| CTAGGGGAACATTCTGATGT+TGG | + | chr4_1:15055322-15055341 | Msa0537190:intron | 45.0% | |
| TAAAGAGATGGCAGCAATGG+AGG | + | chr4_1:15055928-15055947 | Msa0537190:CDS | 45.0% | |
| AAAGAGATGGCAGCAATGGA+GGG | + | chr4_1:15055929-15055948 | Msa0537190:CDS | 45.0% | |
| AGACCAAGATATGGGGGATT+TGG | + | chr4_1:15055997-15056016 | Msa0537190:CDS | 45.0% | |
| CAAGGCCATGATTTACCTAC+AGG | - | chr4_1:15056281-15056300 | None:intergenic | 45.0% | |
| AGAACAACATACCGACGACT+TGG | + | chr4_1:15056404-15056423 | Msa0537190:CDS | 45.0% | |
| GTCATCTTCTTCCAAGTCGT+CGG | - | chr4_1:15056418-15056437 | None:intergenic | 45.0% | |
| !!! | TATTTTTTGTTTTTTTTTTT+TGG | + | chr4_1:15052527-15052546 | Msa0537190:intron | 5.0% |
| AGAGGTCAGTGAAGAATCGG+TGG | - | chr4_1:15047794-15047813 | None:intergenic | 50.0% | |
| GCAATGGCACTATTGCGTAG+TGG | - | chr4_1:15048216-15048235 | None:intergenic | 50.0% | |
| ATGCACGTCAATCCGTCTAC+CGG | - | chr4_1:15048712-15048731 | None:intergenic | 50.0% | |
| GAGATCCCGTGTTTGAACAC+GGG | + | chr4_1:15048771-15048790 | Msa0537190:intron | 50.0% | |
| GGTTACCCGTGTTCAAACAC+GGG | - | chr4_1:15048779-15048798 | None:intergenic | 50.0% | |
| CAAAGCCGAGATTGTTAGGC+AGG | - | chr4_1:15048813-15048832 | None:intergenic | 50.0% | |
| CTGGCAAAGCCGAGATTGTT+AGG | - | chr4_1:15048817-15048836 | None:intergenic | 50.0% | |
| GCCAGTTGAGCTAGGTCTTA+CGG | + | chr4_1:15048832-15048851 | Msa0537190:intron | 50.0% | |
| TCCGTAAGACCTAGCTCAAC+TGG | - | chr4_1:15048836-15048855 | None:intergenic | 50.0% | |
| ATTACCAGCTGCAGAGGTGA+TGG | + | chr4_1:15049672-15049691 | Msa0537190:intron | 50.0% | |
| ATTACCATCACCTCTGCAGC+TGG | - | chr4_1:15049679-15049698 | None:intergenic | 50.0% | |
| TCTCCACTACAAGGTGGCAT+GGG | - | chr4_1:15050171-15050190 | None:intergenic | 50.0% | |
| TTCTCCACTACAAGGTGGCA+TGG | - | chr4_1:15050172-15050191 | None:intergenic | 50.0% | |
| TACGGTTCTCCACTACAAGG+TGG | - | chr4_1:15050177-15050196 | None:intergenic | 50.0% | |
| !! | CATGGTATGGTGGTGGCAAA+TGG | - | chr4_1:15050991-15051010 | None:intergenic | 50.0% |
| AAGCTAGCATGGTATGGTGG+TGG | - | chr4_1:15050998-15051017 | None:intergenic | 50.0% | |
| GAGAAGCTAGCATGGTATGG+TGG | - | chr4_1:15051001-15051020 | None:intergenic | 50.0% | |
| ! | CACGATCGACAAGGTCCTTT+TGG | - | chr4_1:15051681-15051700 | None:intergenic | 50.0% |
| CAAAAGGACCTTGTCGATCG+TGG | + | chr4_1:15051679-15051698 | Msa0537190:CDS | 50.0% | |
| !! | TGTTGGTGATGGTGATGGTG+AGG | + | chr4_1:15051813-15051832 | Msa0537190:CDS | 50.0% |
| !! | GTTGGTGATGGTGATGGTGA+GGG | + | chr4_1:15051814-15051833 | Msa0537190:CDS | 50.0% |
| AACACTGTTGCTCCAGCCAT+TGG | + | chr4_1:15052663-15052682 | Msa0537190:intron | 50.0% | |
| CCTCAGGTCATGCATGAGAA+TGG | - | chr4_1:15053125-15053144 | None:intergenic | 50.0% | |
| CCATTCTCATGCATGACCTG+AGG | + | chr4_1:15053122-15053141 | Msa0537190:CDS | 50.0% | |
| AGCTGGAAGTTCAAGCCAAG+TGG | + | chr4_1:15053162-15053181 | Msa0537190:CDS | 50.0% | |
| TTTGAGCAGATCCTGCCACT+TGG | - | chr4_1:15053180-15053199 | None:intergenic | 50.0% | |
| CACCCTCAACTTCAAGTGGT+AGG | - | chr4_1:15053767-15053786 | None:intergenic | 50.0% | |
| !! | GTAGGGGTGTTACCTTCCAT+TGG | - | chr4_1:15053873-15053892 | None:intergenic | 50.0% |
| GGGCTCCCCTTCTTCATTTA+AGG | - | chr4_1:15054523-15054542 | None:intergenic | 50.0% | |
| AATGAAGAAGGGGAGCCCAT+TGG | + | chr4_1:15054525-15054544 | Msa0537190:CDS | 50.0% | |
| AGCTTCACAAGACCGAAGCT+TGG | + | chr4_1:15055226-15055245 | Msa0537190:intron | 50.0% | |
| AACCACCAGCTCCAACTACT+AGG | + | chr4_1:15055304-15055323 | Msa0537190:intron | 50.0% | |
| ACCACCAGCTCCAACTACTA+GGG | + | chr4_1:15055305-15055324 | Msa0537190:intron | 50.0% | |
| GCAAGCTTCACTGAGGTTGT+TGG | - | chr4_1:15055392-15055411 | None:intergenic | 50.0% | |
| ATTCAGGGCAAGCTTCACTG+AGG | - | chr4_1:15055399-15055418 | None:intergenic | 50.0% | |
| CTATGTGTAGCGTGCAACCA+AGG | + | chr4_1:15055481-15055500 | Msa0537190:intron | 50.0% | |
| AGGAGGCTCACAATCATCCT+TGG | - | chr4_1:15055501-15055520 | None:intergenic | 50.0% | |
| AAGAGATGGCAGCAATGGAG+GGG | + | chr4_1:15055930-15055949 | Msa0537190:CDS | 50.0% | |
| CTGCCAAATCCCCCATATCT+TGG | - | chr4_1:15056003-15056022 | None:intergenic | 50.0% | |
| TCGGCTTTGCCAGTTGAGCT+AGG | + | chr4_1:15048824-15048843 | Msa0537190:intron | 55.0% | |
| ! | GAAAAGGAGGCACGCGACTT+GGG | + | chr4_1:15049857-15049876 | Msa0537190:CDS | 55.0% |
| ! | AAAAGGAGGCACGCGACTTG+GGG | + | chr4_1:15049858-15049877 | Msa0537190:CDS | 55.0% |
| TTTGCGCAGATCCTGCCACT+TGG | - | chr4_1:15050779-15050798 | None:intergenic | 55.0% | |
| GTGGGATGGAGAAGCTAGCA+TGG | - | chr4_1:15051009-15051028 | None:intergenic | 55.0% | |
| CCTAGTCCAAGTCATAGGCC+AGG | - | chr4_1:15051301-15051320 | None:intergenic | 55.0% | |
| ! | CCTGGCCTATGACTTGGACT+AGG | + | chr4_1:15051298-15051317 | Msa0537190:intron | 55.0% |
| ! | CCAAACTAGTGGGCCACTCT+CGG | + | chr4_1:15051617-15051636 | Msa0537190:intron | 55.0% |
| ATCCACCACCTAACCGAGAG+TGG | - | chr4_1:15051633-15051652 | None:intergenic | 55.0% | |
| CCACTAGAAGGTTGCATGGG+CGG | - | chr4_1:15052610-15052629 | None:intergenic | 55.0% | |
| GGAAGTTCAAGCCAAGTGGC+AGG | + | chr4_1:15053166-15053185 | Msa0537190:CDS | 55.0% | |
| CCACCAGCTCCAACTACTAG+GGG | + | chr4_1:15055306-15055325 | Msa0537190:intron | 55.0% | |
| GTTCCCCTAGTAGTTGGAGC+TGG | - | chr4_1:15055312-15055331 | None:intergenic | 55.0% | |
| ! | GGAAAAGGAGGCACGCGACT+TGG | + | chr4_1:15049856-15049875 | Msa0537190:CDS | 60.0% |
| ! | AAAGGAGGCACGCGACTTGG+GGG | + | chr4_1:15049859-15049878 | Msa0537190:CDS | 60.0% |
| CGACCCATGCCACCTTGTAG+TGG | + | chr4_1:15050165-15050184 | Msa0537190:CDS | 60.0% | |
| CCGAGAGTGGCCCACTAGTT+TGG | - | chr4_1:15051620-15051639 | None:intergenic | 60.0% | |
| ! | CTAGTGGGCCACTCTCGGTT+AGG | + | chr4_1:15051622-15051641 | Msa0537190:intron | 60.0% |
| CCGCCCATGCAACCTTCTAG+TGG | + | chr4_1:15052607-15052626 | Msa0537190:CDS | 60.0% | |
| ! | GGTCTTGTGAAGCTTGCCCC+GGG | - | chr4_1:15055220-15055239 | None:intergenic | 60.0% |
| ! | CGGTCTTGTGAAGCTTGCCC+CGG | - | chr4_1:15055221-15055240 | None:intergenic | 60.0% |
| CCCCTAGTAGTTGGAGCTGG+TGG | - | chr4_1:15055309-15055328 | None:intergenic | 60.0% | |
| GTGGGCCACTCTCGGTTAGG+TGG | + | chr4_1:15051625-15051644 | Msa0537190:intron | 65.0% | |
| GGCCACTCTCGGTTAGGTGG+TGG | + | chr4_1:15051628-15051647 | Msa0537190:CDS | 65.0% | |
| GTGGGCCGGTCTCAGTTCGT+TGG | + | chr4_1:15053630-15053649 | Msa0537190:intron | 65.0% | |
| CTTGTGAAGCTTGCCCCGGG+TGG | - | chr4_1:15055217-15055236 | None:intergenic | 65.0% | |
| CCATGGCAGCGCACTCTTCC+AGG | - | chr4_1:15055767-15055786 | None:intergenic | 65.0% | |
| ! | CCTGGAAGAGTGCGCTGCCA+TGG | + | chr4_1:15055764-15055783 | Msa0537190:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 15047693 | 15056888 | 15047693 | ID=Msa0537190;Name=Msa0537190 |
| chr4_1 | mRNA | 15047693 | 15056888 | 15047693 | ID=Msa0537190-mRNA-1;Parent=Msa0537190;Name=Msa0537190-mRNA-1;_AED=0.03;_eAED=0.03;_QI=169|1|0.92|1|0.92|0.85|14|400|976 |
| chr4_1 | exon | 15047693 | 15047844 | 15047693 | ID=Msa0537190-mRNA-1:exon:4659;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15049824 | 15049949 | 15049824 | ID=Msa0537190-mRNA-1:exon:4660;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15050118 | 15050193 | 15050118 | ID=Msa0537190-mRNA-1:exon:4661;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15050383 | 15050828 | 15050383 | ID=Msa0537190-mRNA-1:exon:4662;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15051626 | 15051892 | 15051626 | ID=Msa0537190-mRNA-1:exon:4663;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15052560 | 15052635 | 15052560 | ID=Msa0537190-mRNA-1:exon:4664;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15052799 | 15053229 | 15052799 | ID=Msa0537190-mRNA-1:exon:4665;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15053631 | 15053879 | 15053631 | ID=Msa0537190-mRNA-1:exon:4666;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15054430 | 15054683 | 15054430 | ID=Msa0537190-mRNA-1:exon:4667;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15054761 | 15054964 | 15054761 | ID=Msa0537190-mRNA-1:exon:4668;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15055051 | 15055143 | 15055051 | ID=Msa0537190-mRNA-1:exon:4669;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15055491 | 15055598 | 15055491 | ID=Msa0537190-mRNA-1:exon:4670;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15055686 | 15056099 | 15055686 | ID=Msa0537190-mRNA-1:exon:4671;Parent=Msa0537190-mRNA-1 |
| chr4_1 | exon | 15056285 | 15056888 | 15056285 | ID=Msa0537190-mRNA-1:exon:4672;Parent=Msa0537190-mRNA-1 |
| chr4_1 | five_prime_UTR | 15047693 | 15047844 | 15047693 | ID=Msa0537190-mRNA-1:five_prime_utr;Parent=Msa0537190-mRNA-1 |
| chr4_1 | five_prime_UTR | 15049824 | 15049840 | 15049824 | ID=Msa0537190-mRNA-1:five_prime_utr;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15049841 | 15049949 | 15049841 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15050118 | 15050193 | 15050118 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15050383 | 15050828 | 15050383 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15051626 | 15051892 | 15051626 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15052560 | 15052635 | 15052560 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15052799 | 15053229 | 15052799 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15053631 | 15053879 | 15053631 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15054430 | 15054683 | 15054430 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15054761 | 15054964 | 15054761 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15055051 | 15055143 | 15055051 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15055491 | 15055598 | 15055491 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15055686 | 15056099 | 15055686 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | CDS | 15056285 | 15056488 | 15056285 | ID=Msa0537190-mRNA-1:cds;Parent=Msa0537190-mRNA-1 |
| chr4_1 | three_prime_UTR | 15056489 | 15056888 | 15056489 | ID=Msa0537190-mRNA-1:three_prime_utr;Parent=Msa0537190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
