Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690550 | XP_003607353.1 | 96.855 | 318 | 10 | 0 | 1 | 318 | 1 | 318 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690550 | B7FKU1 | 96.855 | 318 | 10 | 0 | 1 | 318 | 1 | 318 | 0.0 | 622 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0072170 | Msa0690550 | 0.818128 | 2.303466e-52 | -8.615850e-47 |
| Msa0120540 | Msa0690550 | 0.827428 | 1.573472e-54 | -8.615850e-47 |
| Msa0607510 | Msa0690550 | 0.936701 | 1.140072e-97 | -8.615850e-47 |
| Msa0664960 | Msa0690550 | 0.803082 | 4.131437e-49 | -8.615850e-47 |
| Msa0690550 | Msa0693790 | 0.811473 | 6.878040e-51 | -8.615850e-47 |
| Msa0690550 | Msa0711490 | 0.821584 | 3.736504e-53 | -8.615850e-47 |
| Msa0690550 | Msa0735310 | 0.806700 | 7.241590e-50 | -8.615850e-47 |
| Msa0690550 | Msa0905380 | 0.819819 | 9.504714e-53 | -8.615850e-47 |
| Msa0690550 | Msa0933290 | 0.800917 | 1.150693e-48 | -8.615850e-47 |
| Msa0690550 | Msa0939790 | 0.802382 | 5.762468e-49 | -8.615850e-47 |
| Msa0690550 | Msa0993530 | 0.805938 | 1.048202e-49 | -8.615850e-47 |
| Msa0690550 | Msa1003440 | 0.805662 | 1.197759e-49 | -8.615850e-47 |
| Msa0690550 | Msa1033520 | 0.818584 | 1.816014e-52 | -8.615850e-47 |
| Msa0690550 | Msa1094430 | 0.804315 | 2.291583e-49 | -8.615850e-47 |
| Msa0690550 | Msa1160360 | 0.804353 | 2.250020e-49 | -8.615850e-47 |
| Msa0690550 | Msa1340020 | 0.810322 | 1.221276e-50 | -8.615850e-47 |
| Msa0690550 | Msa1363700 | 0.807017 | 6.205577e-50 | -8.615850e-47 |
| Msa0690550 | Msa1382410 | 0.801137 | 1.037621e-48 | -8.615850e-47 |
| Msa0690550 | Msa1435750 | 0.800606 | 1.331834e-48 | -8.615850e-47 |
| Msa0690550 | Msa1452470 | 0.825757 | 3.938717e-54 | -8.615850e-47 |
| Msa0121820 | Msa0690550 | 0.805280 | 1.440612e-49 | -8.615850e-47 |
| Msa0178990 | Msa0690550 | 0.804522 | 2.074328e-49 | -8.615850e-47 |
| Msa0212750 | Msa0690550 | -0.800641 | 1.309962e-48 | -8.615850e-47 |
| Msa0236270 | Msa0690550 | 0.810740 | 9.919449e-51 | -8.615850e-47 |
| Msa0377530 | Msa0690550 | 0.815934 | 7.166014e-52 | -8.615850e-47 |
| Msa0380040 | Msa0690550 | 0.823314 | 1.480516e-53 | -8.615850e-47 |
| Msa0426810 | Msa0690550 | 0.815490 | 8.999450e-52 | -8.615850e-47 |
| Msa0429290 | Msa0690550 | 0.845392 | 4.179692e-59 | -8.615850e-47 |
| Msa0429950 | Msa0690550 | 0.809777 | 1.600099e-50 | -8.615850e-47 |
| Msa0449820 | Msa0690550 | 0.821303 | 4.338183e-53 | -8.615850e-47 |
| Msa0475580 | Msa0690550 | 0.837857 | 4.059233e-57 | -8.615850e-47 |
| Msa0242680 | Msa0690550 | 0.802738 | 4.865647e-49 | -8.615850e-47 |
| Msa0291520 | Msa0690550 | 0.802602 | 5.190454e-49 | -8.615850e-47 |
| Msa0489610 | Msa0690550 | 0.807854 | 4.124765e-50 | -8.615850e-47 |
| Msa0493920 | Msa0690550 | 0.801938 | 7.108197e-49 | -8.615850e-47 |
| Msa0517490 | Msa0690550 | 0.809749 | 1.622503e-50 | -8.615850e-47 |
| Msa0517840 | Msa0690550 | 0.839002 | 2.055779e-57 | -8.615850e-47 |
| Msa0519220 | Msa0690550 | 0.829051 | 6.389986e-55 | -8.615850e-47 |
| Msa0585900 | Msa0690550 | 0.805519 | 1.283480e-49 | -8.615850e-47 |
| Msa0591540 | Msa0690550 | 0.803828 | 2.893488e-49 | -8.615850e-47 |
| Msa0591710 | Msa0690550 | 0.813941 | 1.983205e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690550 | MtrunA17_Chr4g0039211 | 96.855 | 318 | 10 | 0 | 1 | 318 | 1 | 318 | 0.0 | 622 |
| Msa0690550 | MtrunA17_Chr1g0176681 | 92.790 | 319 | 21 | 2 | 1 | 318 | 1 | 318 | 0.0 | 597 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690550 | AT3G13410.1 | 50.625 | 320 | 146 | 8 | 3 | 318 | 9 | 320 | 4.57e-100 | 297 |
| Msa0690550 | AT1G55546.1 | 54.255 | 94 | 39 | 3 | 20 | 113 | 40 | 129 | 4.70e-22 | 90.1 |
Find 84 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAAGACTCATTGGTTTC+AGG | 0.174899 | 4_4:+58403257 | Msa0690550:CDS |
| GTGGCTCTCTTCCTTCTTCT+TGG | 0.191358 | 4_4:-58403501 | None:intergenic |
| ACGGACTTTGCTAGATCTTT+TGG | 0.231444 | 4_4:-58402616 | None:intergenic |
| CAATCCAGTATCCTTCTTAT+AGG | 0.262025 | 4_4:+58403768 | Msa0690550:CDS |
| CCAGCTTAAATCATCACTTT+TGG | 0.275529 | 4_4:+58403865 | Msa0690550:CDS |
| TTCCTTCTTCTTGGTCAAAT+AGG | 0.287794 | 4_4:-58403492 | None:intergenic |
| GTTAAAGATAATAACTGTTC+TGG | 0.298181 | 4_4:+58405235 | Msa0690550:three_prime_UTR |
| GTGTAAAGGGAAGAGATTTC+AGG | 0.312361 | 4_4:+58402807 | Msa0690550:intron |
| GTGGCGCCTCAAATCTTGTT+GGG | 0.319930 | 4_4:-58405194 | None:intergenic |
| ATCAGCTCTGTAGAGGAATC+TGG | 0.330362 | 4_4:+58403704 | Msa0690550:CDS |
| GAAGCCTGCGGAGATGATTT+AGG | 0.333542 | 4_4:+58403287 | Msa0690550:CDS |
| GAAGGAGTCTGTTAATTATC+AGG | 0.343914 | 4_4:+58402585 | Msa0690550:CDS |
| TGCGGAGATGATTTAGGAAT+TGG | 0.347460 | 4_4:+58403293 | Msa0690550:CDS |
| AAAAGTAAAACATCTATTGT+AGG | 0.357426 | 4_4:+58405391 | Msa0690550:three_prime_UTR |
| CCACAAAGGGAAAACAGATT+TGG | 0.378624 | 4_4:+58403520 | Msa0690550:CDS |
| GATCTGGCACTTCTATTTGT+TGG | 0.383798 | 4_4:+58402838 | Msa0690550:CDS |
| AATCCAGTATCCTTCTTATA+GGG | 0.385077 | 4_4:+58403769 | Msa0690550:CDS |
| GGAATTGATAAAACTCCGTT+TGG | 0.385500 | 4_4:-58402229 | None:intergenic |
| AGTAAGAAGCAATTTCATTA+CGG | 0.390693 | 4_4:+58405450 | Msa0690550:three_prime_UTR |
| GATCCCTATAAGAAGGATAC+TGG | 0.395705 | 4_4:-58403772 | None:intergenic |
| TTCCTTGGATCTTGCTCCAT+GGG | 0.398546 | 4_4:+58403326 | Msa0690550:CDS |
| TGTGAACTTGGAAGACTCAT+TGG | 0.398899 | 4_4:+58403250 | Msa0690550:CDS |
| CTACTGTTCCCGCCTTCCTT+TGG | 0.401529 | 4_4:+58402257 | Msa0690550:CDS |
| GATAATAACTGTTCTGGTCC+TGG | 0.403625 | 4_4:+58405241 | Msa0690550:three_prime_UTR |
| TCCATCACAAGCTGTAGAAT+TGG | 0.403651 | 4_4:-58403837 | None:intergenic |
| ATTGGCAACGTTGCTTTCCT+TGG | 0.404386 | 4_4:+58403311 | Msa0690550:CDS |
| TTTCTAGCAGAAAGTACATC+AGG | 0.409982 | 4_4:+58403803 | Msa0690550:CDS |
| TGTGGCGCCTCAAATCTTGT+TGG | 0.413846 | 4_4:-58405195 | None:intergenic |
| CTTTGTAGGGTCTCAGAGAA+TGG | 0.418976 | 4_4:+58402559 | Msa0690550:intron |
| TTTCCTTGGATCTTGCTCCA+TGG | 0.433869 | 4_4:+58403325 | Msa0690550:CDS |
| ATAATAACTGTTCTGGTCCT+GGG | 0.439072 | 4_4:+58405242 | Msa0690550:three_prime_UTR |
| CAGTTATTATCTTTAACAAA+TGG | 0.440781 | 4_4:-58405229 | None:intergenic |
| ATATTTAAATTAAGACCAAC+TGG | 0.456536 | 4_4:-58401941 | None:intergenic |
| AGCATCAGAGGATGTGAACT+TGG | 0.456717 | 4_4:+58403238 | Msa0690550:CDS |
| TATTTCAGAGGCGGCGATGA+TGG | 0.461989 | 4_4:+58402168 | Msa0690550:intron |
| ATTCATTATTTAAGATAGGA+TGG | 0.466814 | 4_4:-58401964 | None:intergenic |
| TCCTCTGATGCTGAAACATA+AGG | 0.468218 | 4_4:-58403227 | None:intergenic |
| CTGGCACTTCTATTTGTTGG+TGG | 0.482408 | 4_4:+58402841 | Msa0690550:CDS |
| ATCGGGCCTTTGCTGTATGA+TGG | 0.483662 | 4_4:+58405161 | Msa0690550:CDS |
| GGATCTTGCTCCATGGGTAA+TGG | 0.485580 | 4_4:+58403332 | Msa0690550:CDS |
| AGAAGGAAGAGAGCCACAAA+GGG | 0.490715 | 4_4:+58403507 | Msa0690550:CDS |
| TGACTCCCCAACAAGATTTG+AGG | 0.493336 | 4_4:+58405188 | Msa0690550:CDS |
| TCAGCTCTGTAGAGGAATCT+GGG | 0.496576 | 4_4:+58403705 | Msa0690550:CDS |
| TTCGCGATTTCCATTACCCA+TGG | 0.501398 | 4_4:-58403342 | None:intergenic |
| ATTTCAGGATACTCTCGATC+TGG | 0.512988 | 4_4:+58402822 | Msa0690550:CDS |
| AAGAAGGAAGAGAGCCACAA+AGG | 0.528123 | 4_4:+58403506 | Msa0690550:CDS |
| CTTTGCAGATCCCTATAAGA+AGG | 0.530818 | 4_4:-58403779 | None:intergenic |
| TGTGAGATCCAACACTTCCA+TGG | 0.530939 | 4_4:+58403199 | Msa0690550:CDS |
| TCCTTATGTTTCAGCATCAG+AGG | 0.531228 | 4_4:+58403226 | Msa0690550:CDS |
| GGTCTCAGAGAATGGATTGA+AGG | 0.533812 | 4_4:+58402567 | Msa0690550:CDS |
| ACTTCTATTTGTTGGTGGAG+AGG | 0.537885 | 4_4:+58402846 | Msa0690550:CDS |
| AGGAAACGCCATGGAAGTGT+TGG | 0.543699 | 4_4:-58403207 | None:intergenic |
| TCGGGCCTTTGCTGTATGAT+GGG | 0.544701 | 4_4:+58405162 | Msa0690550:CDS |
| GGCCTATTTGACCAAGAAGA+AGG | 0.544862 | 4_4:+58403490 | Msa0690550:intron |
| CTCTACAGAGCTGATAAGCT+CGG | 0.545689 | 4_4:-58403696 | None:intergenic |
| GAAGGCGGGAACAGTAGCAG+AGG | 0.554282 | 4_4:-58402251 | None:intergenic |
| CCAAAAGTGATGATTTAAGC+TGG | 0.555189 | 4_4:-58403865 | None:intergenic |
| ATCTAGAAAATTGAAAATTG+AGG | 0.555547 | 4_4:+58402076 | Msa0690550:five_prime_UTR |
| TGAGATGACCAAAGGAAGGC+GGG | 0.556838 | 4_4:-58402265 | None:intergenic |
| TGGCGCCTCAAATCTTGTTG+GGG | 0.563003 | 4_4:-58405193 | None:intergenic |
| CCAGCCTGCTTCAGACAAAA+CGG | 0.566237 | 4_4:-58402635 | None:intergenic |
| ACCAATTCTACAGCTTGTGA+TGG | 0.566623 | 4_4:+58403836 | Msa0690550:CDS |
| GCAGAAAGTACATCAGGGAA+TGG | 0.568177 | 4_4:+58403809 | Msa0690550:CDS |
| AATTCCTAAATCATCTCCGC+AGG | 0.570593 | 4_4:-58403291 | None:intergenic |
| GATTTGGTTGTGTTCTGCAA+TGG | 0.583901 | 4_4:+58403536 | Msa0690550:CDS |
| AGCTCTTTCATACTTGCTCA+AGG | 0.589456 | 4_4:+58403049 | Msa0690550:CDS |
| CGAGCTTATCAGCTCTGTAG+AGG | 0.590194 | 4_4:+58403697 | Msa0690550:CDS |
| CTTCTTATAGGGATCTGCAA+AGG | 0.590622 | 4_4:+58403780 | Msa0690550:CDS |
| CAAATGGATCATCACTCTTG+TGG | 0.596002 | 4_4:-58405213 | None:intergenic |
| GCAGTAATGCAGTAGACCCC+AGG | 0.604290 | 4_4:-58405259 | None:intergenic |
| TACCCATGGAGCAAGATCCA+AGG | 0.604497 | 4_4:-58403328 | None:intergenic |
| TTCAGAGGCGGCGATGATGG+TGG | 0.607460 | 4_4:+58402171 | Msa0690550:intron |
| TCAGGATTCGCTGAAGCCTG+CGG | 0.621670 | 4_4:+58403275 | Msa0690550:CDS |
| ATGAGATGACCAAAGGAAGG+CGG | 0.624433 | 4_4:-58402266 | None:intergenic |
| TAATAACTGTTCTGGTCCTG+GGG | 0.628258 | 4_4:+58405243 | Msa0690550:three_prime_UTR |
| GTTGACAGAACACAATCTGA+AGG | 0.628507 | 4_4:+58403578 | Msa0690550:CDS |
| AAGGCGGGAACAGTAGCAGA+GGG | 0.635922 | 4_4:-58402250 | None:intergenic |
| GATTATAATGAGATGACCAA+AGG | 0.637303 | 4_4:-58402273 | None:intergenic |
| CAATTCCCATCATACAGCAA+AGG | 0.640893 | 4_4:-58405167 | None:intergenic |
| ATAATGAGATGACCAAAGGA+AGG | 0.641343 | 4_4:-58402269 | None:intergenic |
| TTCTAGCAGAAAGTACATCA+GGG | 0.642277 | 4_4:+58403804 | Msa0690550:CDS |
| CAGCTCTGTAGAGGAATCTG+GGG | 0.672726 | 4_4:+58403706 | Msa0690550:CDS |
| TTTATGTGTCAGATATCTCG+AGG | 0.673512 | 4_4:+58403744 | Msa0690550:CDS |
| TGAAACATAAGGAAACGCCA+TGG | 0.719233 | 4_4:-58403216 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTCATTATTTAAGAT+AGG | - | chr4_4:58401971-58401990 | None:intergenic | 10.0% |
| !!! | ATCTTTTTTTTATTTTTCTA+CGG | - | chr4_4:58402003-58402022 | None:intergenic | 10.0% |
| !! | AGAAATAAATAAAAAAAATC+TGG | + | chr4_4:58402024-58402043 | Msa0690550:five_prime_UTR | 10.0% |
| !! | GAAATAAATAAAAAAAATCT+GGG | + | chr4_4:58402025-58402044 | Msa0690550:five_prime_UTR | 10.0% |
| !!! | TAATTTTTTTACTTATTTCA+GGG | + | chr4_4:58405326-58405345 | Msa0690550:three_prime_UTR | 10.0% |
| !!! | TCTTTTTTTTATTTTTCTAC+GGG | - | chr4_4:58402002-58402021 | None:intergenic | 15.0% |
| !!! | TGATATAATTTATTCAGTTT+TGG | + | chr4_4:58402720-58402739 | Msa0690550:intron | 15.0% |
| !!! | TCCATTTTCAATTTTTTATT+TGG | + | chr4_4:58402781-58402800 | Msa0690550:intron | 15.0% |
| !! | TCCAAATAAAAAATTGAAAA+TGG | - | chr4_4:58402785-58402804 | None:intergenic | 15.0% |
| !!! | ATTATGTTTTATTCATAAGA+AGG | - | chr4_4:58404003-58404022 | None:intergenic | 15.0% |
| !! | ACTAAAAATAATACAGAAAT+AGG | + | chr4_4:58404617-58404636 | Msa0690550:intron | 15.0% |
| !!! | TTTGTTGATAATTTTGATAT+CGG | + | chr4_4:58405143-58405162 | Msa0690550:CDS | 15.0% |
| !!! | ATATTATTTGCGATTTTTTA+CGG | + | chr4_4:58405283-58405302 | Msa0690550:three_prime_UTR | 15.0% |
| !! | GAAATAAGTAAAAAAATTAC+AGG | - | chr4_4:58405325-58405344 | None:intergenic | 15.0% |
| !!! | GTAATTTTTTTACTTATTTC+AGG | + | chr4_4:58405325-58405344 | Msa0690550:three_prime_UTR | 15.0% |
| !!! | ATTCATTATTTAAGATAGGA+TGG | - | chr4_4:58401967-58401986 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTATTTTTCTACG+GGG | - | chr4_4:58402001-58402020 | None:intergenic | 20.0% |
| !!! | TTCAATTTTCTAGATTGATT+TGG | - | chr4_4:58402071-58402090 | None:intergenic | 20.0% |
| !! | ATCTAGAAAATTGAAAATTG+AGG | + | chr4_4:58402076-58402095 | Msa0690550:five_prime_UTR | 20.0% |
| !! | ATAATCAAATCAAATTCAGA+TGG | - | chr4_4:58402151-58402170 | None:intergenic | 20.0% |
| !!! | ATTTGATTTGATTATTTCAG+AGG | + | chr4_4:58402156-58402175 | Msa0690550:intron | 20.0% |
| !! | TTAATGAATTGAAAAGTGAT+TGG | - | chr4_4:58402307-58402326 | None:intergenic | 20.0% |
| !! | TATGTATACCATATAAGAAT+GGG | + | chr4_4:58402464-58402483 | Msa0690550:intron | 20.0% |
| !!! | CAGTTTTCAGATATAATTAA+CGG | - | chr4_4:58402514-58402533 | None:intergenic | 20.0% |
| !!! | TTTTTATTTGGATAGTGTAA+AGG | + | chr4_4:58402793-58402812 | Msa0690550:intron | 20.0% |
| !!! | TTTTATTTGGATAGTGTAAA+GGG | + | chr4_4:58402794-58402813 | Msa0690550:intron | 20.0% |
| !! | ATGACCAATTATGAAATATT+AGG | + | chr4_4:58403414-58403433 | Msa0690550:intron | 20.0% |
| !! | TCTTGTATCATTAAAATTTG+AGG | - | chr4_4:58404175-58404194 | None:intergenic | 20.0% |
| !! | TAAATGATGCTCATATTATT+TGG | - | chr4_4:58404535-58404554 | None:intergenic | 20.0% |
| !! | CAGAAATAGGAAAAAAAAAA+AGG | + | chr4_4:58404630-58404649 | Msa0690550:intron | 20.0% |
| !! | TCATTGATATAAATTCTTAG+TGG | - | chr4_4:58404910-58404929 | None:intergenic | 20.0% |
| !! | GTAGATTATATCATTATCTT+AGG | - | chr4_4:58404990-58405009 | None:intergenic | 20.0% |
| !! | GATAATGATATAATCTACAA+TGG | + | chr4_4:58404992-58405011 | Msa0690550:intron | 20.0% |
| !!! | TTGTTGATAATTTTGATATC+GGG | + | chr4_4:58405144-58405163 | Msa0690550:CDS | 20.0% |
| !! | CAGTTATTATCTTTAACAAA+TGG | - | chr4_4:58405232-58405251 | None:intergenic | 20.0% |
| !! | AAAAGTAAAACATCTATTGT+AGG | + | chr4_4:58405391-58405410 | Msa0690550:three_prime_UTR | 20.0% |
| ! | ATGGAATTGAATAAACGAAT+TGG | - | chr4_4:58402132-58402151 | None:intergenic | 25.0% |
| ! | GTATGTATACCATATAAGAA+TGG | + | chr4_4:58402463-58402482 | Msa0690550:intron | 25.0% |
| ! | ATGTATACCATATAAGAATG+GGG | + | chr4_4:58402465-58402484 | Msa0690550:intron | 25.0% |
| ! | CAAGAAAACAAATGTAAACT+AGG | - | chr4_4:58402918-58402937 | None:intergenic | 25.0% |
| ! | AGGACCTAATATTTCATAAT+TGG | - | chr4_4:58403421-58403440 | None:intergenic | 25.0% |
| ! | ATTGTCCATTATAACTTTAC+AGG | + | chr4_4:58403469-58403488 | Msa0690550:intron | 25.0% |
| !!! | TCAACATTTTTTGAATCTTG+AGG | - | chr4_4:58403563-58403582 | None:intergenic | 25.0% |
| !! | CATGCATGTTGTATATTTTT+AGG | + | chr4_4:58403662-58403681 | Msa0690550:intron | 25.0% |
| ! | AGATAATTTAATTACGGAGA+AGG | - | chr4_4:58404085-58404104 | None:intergenic | 25.0% |
| ! | TTCTCCGTAATTAAATTATC+TGG | + | chr4_4:58404084-58404103 | Msa0690550:intron | 25.0% |
| ! | GGTACCAGATAATTTAATTA+CGG | - | chr4_4:58404091-58404110 | None:intergenic | 25.0% |
| !! | AACTGTGCAATTAGTTATTT+TGG | + | chr4_4:58404233-58404252 | Msa0690550:intron | 25.0% |
| !!! | CAGTAAATTGTAACTTGTTA+TGG | - | chr4_4:58404665-58404684 | None:intergenic | 25.0% |
| ! | AATGAATTGTAATTCAGATC+TGG | + | chr4_4:58404925-58404944 | Msa0690550:intron | 25.0% |
| ! | TAACATCAGATATTAATGGA+AGG | - | chr4_4:58405024-58405043 | None:intergenic | 25.0% |
| ! | GAAGTAACATCAGATATTAA+TGG | - | chr4_4:58405028-58405047 | None:intergenic | 25.0% |
| ! | GTTAAAGATAATAACTGTTC+TGG | + | chr4_4:58405235-58405254 | Msa0690550:three_prime_UTR | 25.0% |
| !!! | GATGTTTTACTTTTATACAC+TGG | - | chr4_4:58405385-58405404 | None:intergenic | 25.0% |
| ! | AGTAAGAAGCAATTTCATTA+CGG | + | chr4_4:58405450-58405469 | Msa0690550:three_prime_UTR | 25.0% |
| TGATTTGATTATTTCAGAGG+CGG | + | chr4_4:58402159-58402178 | Msa0690550:intron | 30.0% | |
| GATTATAATGAGATGACCAA+AGG | - | chr4_4:58402276-58402295 | None:intergenic | 30.0% | |
| ! | ATATCTGACTGATTCTTTGT+AGG | + | chr4_4:58402545-58402564 | Msa0690550:intron | 30.0% |
| ! | TATCTGACTGATTCTTTGTA+GGG | + | chr4_4:58402546-58402565 | Msa0690550:intron | 30.0% |
| ! | GTAAATATCGTTCAAGCTTT+TGG | + | chr4_4:58402868-58402887 | Msa0690550:intron | 30.0% |
| ATAGGCCTGTAAAGTTATAA+TGG | - | chr4_4:58403477-58403496 | None:intergenic | 30.0% | |
| TACATCTACTTCAGAGTTAT+GGG | + | chr4_4:58403601-58403620 | Msa0690550:intron | 30.0% | |
| AATCCAGTATCCTTCTTATA+GGG | + | chr4_4:58403769-58403788 | Msa0690550:CDS | 30.0% | |
| !! | CTTAAATCATCACTTTTGGA+GGG | + | chr4_4:58403869-58403888 | Msa0690550:CDS | 30.0% |
| AATGGAACATGCAAAAAAAG+TGG | - | chr4_4:58404041-58404060 | None:intergenic | 30.0% | |
| TTTAATTACGGAGAAGGAAA+GGG | - | chr4_4:58404079-58404098 | None:intergenic | 30.0% | |
| ATTTAATTACGGAGAAGGAA+AGG | - | chr4_4:58404080-58404099 | None:intergenic | 30.0% | |
| AACTAATTGCACAGTTTGTA+GGG | - | chr4_4:58404229-58404248 | None:intergenic | 30.0% | |
| TAACTAATTGCACAGTTTGT+AGG | - | chr4_4:58404230-58404249 | None:intergenic | 30.0% | |
| ATGTTCATGTATCAGATTCA+AGG | - | chr4_4:58404334-58404353 | None:intergenic | 30.0% | |
| CTTCTTAAATTAAGTGTGCA+AGG | - | chr4_4:58404384-58404403 | None:intergenic | 30.0% | |
| !!! | TATACGTCTTGTTTGGATTT+TGG | + | chr4_4:58404483-58404502 | Msa0690550:intron | 30.0% |
| TTTAATTGGACACCTAAATG+AGG | + | chr4_4:58404796-58404815 | Msa0690550:intron | 30.0% | |
| CATCAGGATATCATAATGTT+GGG | - | chr4_4:58405092-58405111 | None:intergenic | 30.0% | |
| TCATCAGGATATCATAATGT+TGG | - | chr4_4:58405093-58405112 | None:intergenic | 30.0% | |
| AACATTATGATATCCTGATG+AGG | + | chr4_4:58405092-58405111 | Msa0690550:intron | 30.0% | |
| !!! | GTTACTTTTGTGATAATCCA+GGG | + | chr4_4:58405114-58405133 | Msa0690550:intron | 30.0% |
| TTATCAACAAAACTATTCCC+TGG | - | chr4_4:58405134-58405153 | None:intergenic | 30.0% | |
| !!! | TTATTTGCGATTTTTTACGG+AGG | + | chr4_4:58405286-58405305 | Msa0690550:three_prime_UTR | 30.0% |
| !! | GCTTCACTTTTCATTCCAAA+CGG | + | chr4_4:58402214-58402233 | Msa0690550:CDS | 35.0% |
| GGAATTGATAAAACTCCGTT+TGG | - | chr4_4:58402232-58402251 | None:intergenic | 35.0% | |
| ATAATGAGATGACCAAAGGA+AGG | - | chr4_4:58402272-58402291 | None:intergenic | 35.0% | |
| TGCGTCAAAGATCCTAATTA+CGG | - | chr4_4:58402397-58402416 | None:intergenic | 35.0% | |
| GAAGGAGTCTGTTAATTATC+AGG | + | chr4_4:58402585-58402604 | Msa0690550:CDS | 35.0% | |
| TTCTATCATTGATGTTGCTG+CGG | + | chr4_4:58402747-58402766 | Msa0690550:intron | 35.0% | |
| TTTCTGTGTAAACCTGATTC+AGG | + | chr4_4:58403108-58403127 | Msa0690550:intron | 35.0% | |
| TATTAGGTCCTTCCTTGTAA+TGG | + | chr4_4:58403430-58403449 | Msa0690550:intron | 35.0% | |
| TTCCTTCTTCTTGGTCAAAT+AGG | - | chr4_4:58403495-58403514 | None:intergenic | 35.0% | |
| GTACATCTACTTCAGAGTTA+TGG | + | chr4_4:58403600-58403619 | Msa0690550:intron | 35.0% | |
| TTTATGTGTCAGATATCTCG+AGG | + | chr4_4:58403744-58403763 | Msa0690550:CDS | 35.0% | |
| CAATCCAGTATCCTTCTTAT+AGG | + | chr4_4:58403768-58403787 | Msa0690550:CDS | 35.0% | |
| ! | TTTCTAGCAGAAAGTACATC+AGG | + | chr4_4:58403803-58403822 | Msa0690550:CDS | 35.0% |
| ! | TTCTAGCAGAAAGTACATCA+GGG | + | chr4_4:58403804-58403823 | Msa0690550:CDS | 35.0% |
| CCAAAAGTGATGATTTAAGC+TGG | - | chr4_4:58403868-58403887 | None:intergenic | 35.0% | |
| ! | CCAGCTTAAATCATCACTTT+TGG | + | chr4_4:58403865-58403884 | Msa0690550:CDS | 35.0% |
| !! | GCTTAAATCATCACTTTTGG+AGG | + | chr4_4:58403868-58403887 | Msa0690550:CDS | 35.0% |
| TCCTAAGCGCTTGTATAAAT+GGG | - | chr4_4:58403918-58403937 | None:intergenic | 35.0% | |
| CTTCTACAAATACGCTAATC+TGG | + | chr4_4:58403965-58403984 | Msa0690550:intron | 35.0% | |
| GGGAAAAACGGAAGAAAAAA+TGG | - | chr4_4:58404059-58404078 | None:intergenic | 35.0% | |
| ATGCATATGAAGTGTACTTG+TGG | - | chr4_4:58404112-58404131 | None:intergenic | 35.0% | |
| GTAGGGAAGCAAATAAAGAA+AGG | - | chr4_4:58404212-58404231 | None:intergenic | 35.0% | |
| CAAGGAAAGACAGTTATACA+AGG | - | chr4_4:58404299-58404318 | None:intergenic | 35.0% | |
| TGTCTATAGGCATGTATACA+AGG | - | chr4_4:58404408-58404427 | None:intergenic | 35.0% | |
| CTCAACAATAGTCTGTCTAT+AGG | - | chr4_4:58404421-58404440 | None:intergenic | 35.0% | |
| CTATAGACAGACTATTGTTG+AGG | + | chr4_4:58404419-58404438 | Msa0690550:intron | 35.0% | |
| AACAAGACGTATACCATTTG+AGG | - | chr4_4:58404476-58404495 | None:intergenic | 35.0% | |
| ! | CAAATGGTATACGTCTTGTT+TGG | + | chr4_4:58404476-58404495 | Msa0690550:intron | 35.0% |
| GTCTGAATAGTTCAAATGCA+GGG | - | chr4_4:58404513-58404532 | None:intergenic | 35.0% | |
| ! | AACTCTTTTGTGTAGTATCG+TGG | - | chr4_4:58404709-58404728 | None:intergenic | 35.0% |
| ATTAGACACGAGATACACAA+AGG | + | chr4_4:58404859-58404878 | Msa0690550:intron | 35.0% | |
| CTTAGGAGTTATCTCTTACT+AGG | - | chr4_4:58404973-58404992 | None:intergenic | 35.0% | |
| ! | TGACTTTGTTGATAGAGTGT+TGG | + | chr4_4:58405061-58405080 | Msa0690550:intron | 35.0% |
| ATCACAAAAGTAACCTCATC+AGG | - | chr4_4:58405108-58405127 | None:intergenic | 35.0% | |
| !!! | GGTTACTTTTGTGATAATCC+AGG | + | chr4_4:58405113-58405132 | Msa0690550:intron | 35.0% |
| ATAATAACTGTTCTGGTCCT+GGG | + | chr4_4:58405242-58405261 | Msa0690550:three_prime_UTR | 35.0% | |
| !!! | AGGTTTTAATTTCGATCCTG+CGG | + | chr4_4:58405411-58405430 | Msa0690550:three_prime_UTR | 35.0% |
| ! | TAAAATTTTACAACACCCGC+AGG | - | chr4_4:58405430-58405449 | None:intergenic | 35.0% |
| TGTGCTAATCCACCGTAATT+AGG | + | chr4_4:58402382-58402401 | Msa0690550:intron | 40.0% | |
| GTCAAAGATCCTAATTACGG+TGG | - | chr4_4:58402394-58402413 | None:intergenic | 40.0% | |
| CTAGATGCTGCATGTAGTAA+TGG | + | chr4_4:58402433-58402452 | Msa0690550:intron | 40.0% | |
| TGTGCATCCCCATTCTTATA+TGG | - | chr4_4:58402475-58402494 | None:intergenic | 40.0% | |
| ! | ACGGACTTTGCTAGATCTTT+TGG | - | chr4_4:58402619-58402638 | None:intergenic | 40.0% |
| GTGTAAAGGGAAGAGATTTC+AGG | + | chr4_4:58402807-58402826 | Msa0690550:intron | 40.0% | |
| ATTTCAGGATACTCTCGATC+TGG | + | chr4_4:58402822-58402841 | Msa0690550:CDS | 40.0% | |
| GATCTGGCACTTCTATTTGT+TGG | + | chr4_4:58402838-58402857 | Msa0690550:CDS | 40.0% | |
| ! | ACTTCTATTTGTTGGTGGAG+AGG | + | chr4_4:58402846-58402865 | Msa0690550:CDS | 40.0% |
| ! | GTGTCGTTGCATTGTTTCAT+AGG | + | chr4_4:58402961-58402980 | Msa0690550:intron | 40.0% |
| TCTGAAGACTGTAACTGCAA+AGG | - | chr4_4:58403002-58403021 | None:intergenic | 40.0% | |
| AGCTCTTTCATACTTGCTCA+AGG | + | chr4_4:58403049-58403068 | Msa0690550:CDS | 40.0% | |
| ACCTGATTCAGGATAGCTAA+TGG | + | chr4_4:58403119-58403138 | Msa0690550:intron | 40.0% | |
| TCCATTAGCTATCCTGAATC+AGG | - | chr4_4:58403123-58403142 | None:intergenic | 40.0% | |
| CATTCTCCATTGTCATGAAC+AGG | + | chr4_4:58403169-58403188 | Msa0690550:intron | 40.0% | |
| AAGAGTCCTGTTCATGACAA+TGG | - | chr4_4:58403178-58403197 | None:intergenic | 40.0% | |
| TGAAACATAAGGAAACGCCA+TGG | - | chr4_4:58403219-58403238 | None:intergenic | 40.0% | |
| TCCTTATGTTTCAGCATCAG+AGG | + | chr4_4:58403226-58403245 | Msa0690550:CDS | 40.0% | |
| TCCTCTGATGCTGAAACATA+AGG | - | chr4_4:58403230-58403249 | None:intergenic | 40.0% | |
| TGTGAACTTGGAAGACTCAT+TGG | + | chr4_4:58403250-58403269 | Msa0690550:CDS | 40.0% | |
| !! | TTGGAAGACTCATTGGTTTC+AGG | + | chr4_4:58403257-58403276 | Msa0690550:CDS | 40.0% |
| AATTCCTAAATCATCTCCGC+AGG | - | chr4_4:58403294-58403313 | None:intergenic | 40.0% | |
| TGCGGAGATGATTTAGGAAT+TGG | + | chr4_4:58403293-58403312 | Msa0690550:CDS | 40.0% | |
| TCATGCAACCATTACAAGGA+AGG | - | chr4_4:58403441-58403460 | None:intergenic | 40.0% | |
| AGCATCATGCAACCATTACA+AGG | - | chr4_4:58403445-58403464 | None:intergenic | 40.0% | |
| ! | CCAAATCTGTTTTCCCTTTG+TGG | - | chr4_4:58403523-58403542 | None:intergenic | 40.0% |
| CCACAAAGGGAAAACAGATT+TGG | + | chr4_4:58403520-58403539 | Msa0690550:CDS | 40.0% | |
| ! | GATTTGGTTGTGTTCTGCAA+TGG | + | chr4_4:58403536-58403555 | Msa0690550:CDS | 40.0% |
| GTTGACAGAACACAATCTGA+AGG | + | chr4_4:58403578-58403597 | Msa0690550:CDS | 40.0% | |
| GGCAGATGGTAAGATTATGT+CGG | - | chr4_4:58403633-58403652 | None:intergenic | 40.0% | |
| ACAACATGCATGAGAACACT+CGG | - | chr4_4:58403654-58403673 | None:intergenic | 40.0% | |
| GATCCCTATAAGAAGGATAC+TGG | - | chr4_4:58403775-58403794 | None:intergenic | 40.0% | |
| CTTTGCAGATCCCTATAAGA+AGG | - | chr4_4:58403782-58403801 | None:intergenic | 40.0% | |
| CTTCTTATAGGGATCTGCAA+AGG | + | chr4_4:58403780-58403799 | Msa0690550:CDS | 40.0% | |
| ACCAATTCTACAGCTTGTGA+TGG | + | chr4_4:58403836-58403855 | Msa0690550:CDS | 40.0% | |
| TCCATCACAAGCTGTAGAAT+TGG | - | chr4_4:58403840-58403859 | None:intergenic | 40.0% | |
| !! | ACTTTTGGAGGGACTTTTAG+TGG | + | chr4_4:58403880-58403899 | Msa0690550:CDS | 40.0% |
| CTCCTAAGCGCTTGTATAAA+TGG | - | chr4_4:58403919-58403938 | None:intergenic | 40.0% | |
| CACTTCATATGCATGCTTGT+AGG | + | chr4_4:58404118-58404137 | Msa0690550:intron | 40.0% | |
| AACTTCTAGCCACTATTGCA+TGG | + | chr4_4:58404266-58404285 | Msa0690550:intron | 40.0% | |
| TGCATCAACTGATCCTCAAA+TGG | + | chr4_4:58404460-58404479 | Msa0690550:intron | 40.0% | |
| GGTCTGAATAGTTCAAATGC+AGG | - | chr4_4:58404514-58404533 | None:intergenic | 40.0% | |
| !! | GCTCTAATATAGCTCTGACA+CGG | - | chr4_4:58404759-58404778 | None:intergenic | 40.0% |
| ACGTGTAAGACACCTCATTT+AGG | - | chr4_4:58404811-58404830 | None:intergenic | 40.0% | |
| CAATTCCCATCATACAGCAA+AGG | - | chr4_4:58405170-58405189 | None:intergenic | 40.0% | |
| CAAATGGATCATCACTCTTG+TGG | - | chr4_4:58405216-58405235 | None:intergenic | 40.0% | |
| GATAATAACTGTTCTGGTCC+TGG | + | chr4_4:58405241-58405260 | Msa0690550:three_prime_UTR | 40.0% | |
| TAATAACTGTTCTGGTCCTG+GGG | + | chr4_4:58405243-58405262 | Msa0690550:three_prime_UTR | 40.0% | |
| !!! | GGTTTTAATTTCGATCCTGC+GGG | + | chr4_4:58405412-58405431 | Msa0690550:three_prime_UTR | 40.0% |
| ATGAGATGACCAAAGGAAGG+CGG | - | chr4_4:58402269-58402288 | None:intergenic | 45.0% | |
| CTTTGTAGGGTCTCAGAGAA+TGG | + | chr4_4:58402559-58402578 | Msa0690550:intron | 45.0% | |
| !! | GGTCTCAGAGAATGGATTGA+AGG | + | chr4_4:58402567-58402586 | Msa0690550:CDS | 45.0% |
| !! | AAGTCCGTTTTGTCTGAAGC+AGG | + | chr4_4:58402631-58402650 | Msa0690550:CDS | 45.0% |
| !! | AGCAGGCTGGTCAAATTTTC+TGG | + | chr4_4:58402648-58402667 | Msa0690550:CDS | 45.0% |
| ! | CTGGCACTTCTATTTGTTGG+TGG | + | chr4_4:58402841-58402860 | Msa0690550:CDS | 45.0% |
| TGTGAGATCCAACACTTCCA+TGG | + | chr4_4:58403199-58403218 | Msa0690550:CDS | 45.0% | |
| AGCATCAGAGGATGTGAACT+TGG | + | chr4_4:58403238-58403257 | Msa0690550:CDS | 45.0% | |
| ! | ATTGGCAACGTTGCTTTCCT+TGG | + | chr4_4:58403311-58403330 | Msa0690550:CDS | 45.0% |
| TTTCCTTGGATCTTGCTCCA+TGG | + | chr4_4:58403325-58403344 | Msa0690550:CDS | 45.0% | |
| TTCCTTGGATCTTGCTCCAT+GGG | + | chr4_4:58403326-58403345 | Msa0690550:CDS | 45.0% | |
| TTCGCGATTTCCATTACCCA+TGG | - | chr4_4:58403345-58403364 | None:intergenic | 45.0% | |
| GGCCTATTTGACCAAGAAGA+AGG | + | chr4_4:58403490-58403509 | Msa0690550:intron | 45.0% | |
| AAGAAGGAAGAGAGCCACAA+AGG | + | chr4_4:58403506-58403525 | Msa0690550:CDS | 45.0% | |
| AGAAGGAAGAGAGCCACAAA+GGG | + | chr4_4:58403507-58403526 | Msa0690550:CDS | 45.0% | |
| CTCTACAGAGCTGATAAGCT+CGG | - | chr4_4:58403699-58403718 | None:intergenic | 45.0% | |
| ATCAGCTCTGTAGAGGAATC+TGG | + | chr4_4:58403704-58403723 | Msa0690550:CDS | 45.0% | |
| TCAGCTCTGTAGAGGAATCT+GGG | + | chr4_4:58403705-58403724 | Msa0690550:CDS | 45.0% | |
| ! | GCAGAAAGTACATCAGGGAA+TGG | + | chr4_4:58403809-58403828 | Msa0690550:CDS | 45.0% |
| GCCCATTTATACAAGCGCTT+AGG | + | chr4_4:58403914-58403933 | Msa0690550:intron | 45.0% | |
| CGGAGAAGGAAAGGGAAAAA+CGG | - | chr4_4:58404071-58404090 | None:intergenic | 45.0% | |
| GGAAAGATGCCATGCAATAG+TGG | - | chr4_4:58404278-58404297 | None:intergenic | 45.0% | |
| TCAAGGACAGCAGTTCTACA+AGG | - | chr4_4:58404317-58404336 | None:intergenic | 45.0% | |
| GGTGTCTTACACGTGTCATA+CGG | + | chr4_4:58404817-58404836 | Msa0690550:intron | 45.0% | |
| GTGTCTTACACGTGTCATAC+GGG | + | chr4_4:58404818-58404837 | Msa0690550:intron | 45.0% | |
| TGACTCCCCAACAAGATTTG+AGG | + | chr4_4:58405188-58405207 | Msa0690550:CDS | 45.0% | |
| !!! | TGCGATTTTTTACGGAGGCT+CGG | + | chr4_4:58405291-58405310 | Msa0690550:three_prime_UTR | 45.0% |
| !!! | AAAAAAGAATTATTTTTAAT+TGG | + | chr4_4:58404782-58404801 | Msa0690550:intron | 5.0% |
| TATTTCAGAGGCGGCGATGA+TGG | + | chr4_4:58402168-58402187 | Msa0690550:intron | 50.0% | |
| TGAGATGACCAAAGGAAGGC+GGG | - | chr4_4:58402268-58402287 | None:intergenic | 50.0% | |
| CCAGCCTGCTTCAGACAAAA+CGG | - | chr4_4:58402638-58402657 | None:intergenic | 50.0% | |
| ATGCAACGACACTCGTTGAC+AGG | - | chr4_4:58402953-58402972 | None:intergenic | 50.0% | |
| ! | AGGAAACGCCATGGAAGTGT+TGG | - | chr4_4:58403210-58403229 | None:intergenic | 50.0% |
| GAAGCCTGCGGAGATGATTT+AGG | + | chr4_4:58403287-58403306 | Msa0690550:CDS | 50.0% | |
| TACCCATGGAGCAAGATCCA+AGG | - | chr4_4:58403331-58403350 | None:intergenic | 50.0% | |
| GGATCTTGCTCCATGGGTAA+TGG | + | chr4_4:58403332-58403351 | Msa0690550:CDS | 50.0% | |
| GTGGCTCTCTTCCTTCTTCT+TGG | - | chr4_4:58403504-58403523 | None:intergenic | 50.0% | |
| CGAGCTTATCAGCTCTGTAG+AGG | + | chr4_4:58403697-58403716 | Msa0690550:CDS | 50.0% | |
| CAGCTCTGTAGAGGAATCTG+GGG | + | chr4_4:58403706-58403725 | Msa0690550:CDS | 50.0% | |
| ! | GTTGTTGCTTCCCACCAGAA+CGG | + | chr4_4:58404726-58404745 | Msa0690550:intron | 50.0% |
| TACACGTGTCATACGGGTGT+TGG | + | chr4_4:58404824-58404843 | Msa0690550:intron | 50.0% | |
| GACGAGTTCTCTCAGAAGCA+AGG | - | chr4_4:58404888-58404907 | None:intergenic | 50.0% | |
| ! | ATCGGGCCTTTGCTGTATGA+TGG | + | chr4_4:58405161-58405180 | Msa0690550:CDS | 50.0% |
| ! | TCGGGCCTTTGCTGTATGAT+GGG | + | chr4_4:58405162-58405181 | Msa0690550:CDS | 50.0% |
| TGGCGCCTCAAATCTTGTTG+GGG | - | chr4_4:58405196-58405215 | None:intergenic | 50.0% | |
| GTGGCGCCTCAAATCTTGTT+GGG | - | chr4_4:58405197-58405216 | None:intergenic | 50.0% | |
| TGTGGCGCCTCAAATCTTGT+TGG | - | chr4_4:58405198-58405217 | None:intergenic | 50.0% | |
| AAGGCGGGAACAGTAGCAGA+GGG | - | chr4_4:58402253-58402272 | None:intergenic | 55.0% | |
| CTACTGTTCCCGCCTTCCTT+TGG | + | chr4_4:58402257-58402276 | Msa0690550:CDS | 55.0% | |
| !! | CCGTTTTGTCTGAAGCAGGC+TGG | + | chr4_4:58402635-58402654 | Msa0690550:CDS | 55.0% |
| TCAGGATTCGCTGAAGCCTG+CGG | + | chr4_4:58403275-58403294 | Msa0690550:CDS | 55.0% | |
| GCATGAGAACACTCGGCAGA+TGG | - | chr4_4:58403647-58403666 | None:intergenic | 55.0% | |
| GCAGTAATGCAGTAGACCCC+AGG | - | chr4_4:58405262-58405281 | None:intergenic | 55.0% | |
| ! | TTCAGAGGCGGCGATGATGG+TGG | + | chr4_4:58402171-58402190 | Msa0690550:intron | 60.0% |
| GAAGGCGGGAACAGTAGCAG+AGG | - | chr4_4:58402254-58402273 | None:intergenic | 60.0% | |
| CGGACAGACACCGTTCTGGT+GGG | - | chr4_4:58404739-58404758 | None:intergenic | 60.0% | |
| ACGGACAGACACCGTTCTGG+TGG | - | chr4_4:58404740-58404759 | None:intergenic | 60.0% | |
| GACACGGACAGACACCGTTC+TGG | - | chr4_4:58404743-58404762 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 58401943 | 58405502 | 58401943 | ID=Msa0690550;Name=Msa0690550 |
| chr4_4 | mRNA | 58401943 | 58405502 | 58401943 | ID=Msa0690550-mRNA-1;Parent=Msa0690550;Name=Msa0690550-mRNA-1;_AED=0.15;_eAED=0.15;_QI=163|1|1|1|0.87|0.88|9|278|318 |
| chr4_4 | exon | 58401943 | 58402097 | 58401943 | ID=Msa0690550-mRNA-1:exon:15676;Parent=Msa0690550-mRNA-1 |
| chr4_4 | exon | 58402176 | 58402296 | 58402176 | ID=Msa0690550-mRNA-1:exon:15677;Parent=Msa0690550-mRNA-1 |
| chr4_4 | exon | 58402567 | 58402669 | 58402567 | ID=Msa0690550-mRNA-1:exon:15678;Parent=Msa0690550-mRNA-1 |
| chr4_4 | exon | 58402808 | 58402867 | 58402808 | ID=Msa0690550-mRNA-1:exon:15679;Parent=Msa0690550-mRNA-1 |
| chr4_4 | exon | 58403008 | 58403070 | 58403008 | ID=Msa0690550-mRNA-1:exon:15680;Parent=Msa0690550-mRNA-1 |
| chr4_4 | exon | 58403191 | 58403391 | 58403191 | ID=Msa0690550-mRNA-1:exon:15681;Parent=Msa0690550-mRNA-1 |
| chr4_4 | exon | 58403491 | 58403599 | 58403491 | ID=Msa0690550-mRNA-1:exon:15682;Parent=Msa0690550-mRNA-1 |
| chr4_4 | exon | 58403684 | 58403901 | 58403684 | ID=Msa0690550-mRNA-1:exon:15683;Parent=Msa0690550-mRNA-1 |
| chr4_4 | exon | 58405135 | 58405502 | 58405135 | ID=Msa0690550-mRNA-1:exon:15684;Parent=Msa0690550-mRNA-1 |
| chr4_4 | five_prime_UTR | 58401943 | 58402097 | 58401943 | ID=Msa0690550-mRNA-1:five_prime_utr;Parent=Msa0690550-mRNA-1 |
| chr4_4 | five_prime_UTR | 58402176 | 58402183 | 58402176 | ID=Msa0690550-mRNA-1:five_prime_utr;Parent=Msa0690550-mRNA-1 |
| chr4_4 | CDS | 58402184 | 58402296 | 58402184 | ID=Msa0690550-mRNA-1:cds;Parent=Msa0690550-mRNA-1 |
| chr4_4 | CDS | 58402567 | 58402669 | 58402567 | ID=Msa0690550-mRNA-1:cds;Parent=Msa0690550-mRNA-1 |
| chr4_4 | CDS | 58402808 | 58402867 | 58402808 | ID=Msa0690550-mRNA-1:cds;Parent=Msa0690550-mRNA-1 |
| chr4_4 | CDS | 58403008 | 58403070 | 58403008 | ID=Msa0690550-mRNA-1:cds;Parent=Msa0690550-mRNA-1 |
| chr4_4 | CDS | 58403191 | 58403391 | 58403191 | ID=Msa0690550-mRNA-1:cds;Parent=Msa0690550-mRNA-1 |
| chr4_4 | CDS | 58403491 | 58403599 | 58403491 | ID=Msa0690550-mRNA-1:cds;Parent=Msa0690550-mRNA-1 |
| chr4_4 | CDS | 58403684 | 58403901 | 58403684 | ID=Msa0690550-mRNA-1:cds;Parent=Msa0690550-mRNA-1 |
| chr4_4 | CDS | 58405135 | 58405224 | 58405135 | ID=Msa0690550-mRNA-1:cds;Parent=Msa0690550-mRNA-1 |
| chr4_4 | three_prime_UTR | 58405225 | 58405502 | 58405225 | ID=Msa0690550-mRNA-1:three_prime_utr;Parent=Msa0690550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
