Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1160360 | XP_003625031.1 | 98.802 | 167 | 2 | 0 | 1 | 167 | 1 | 167 | 7.55e-118 | 340 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1160360 | sp|Q9M1J1|FIS1A_ARATH | 64.706 | 170 | 57 | 1 | 1 | 167 | 1 | 170 | 9.61e-79 | 234 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1160360 | A2Q2Z4 | 98.802 | 167 | 2 | 0 | 1 | 167 | 1 | 167 | 3.60e-118 | 340 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000940 | Msa1160360 | 0.811846 | 5.707676e-51 | -8.615850e-47 |
Msa0004540 | Msa1160360 | 0.803830 | 2.890559e-49 | -8.615850e-47 |
Msa0006880 | Msa1160360 | 0.841591 | 4.329383e-58 | -8.615850e-47 |
Msa0007850 | Msa1160360 | 0.809908 | 1.499761e-50 | -8.615850e-47 |
Msa0008090 | Msa1160360 | 0.802246 | 6.143763e-49 | -8.615850e-47 |
Msa0008410 | Msa1160360 | 0.817075 | 3.979337e-52 | -8.615850e-47 |
Msa0008840 | Msa1160360 | 0.827227 | 1.757927e-54 | -8.615850e-47 |
Msa0014830 | Msa1160360 | 0.813862 | 2.064310e-51 | -8.615850e-47 |
Msa0026660 | Msa1160360 | 0.820976 | 5.160360e-53 | -8.615850e-47 |
Msa0027580 | Msa1160360 | 0.812304 | 4.534159e-51 | -8.615850e-47 |
Msa0029260 | Msa1160360 | 0.814940 | 1.192391e-51 | -8.615850e-47 |
Msa0033880 | Msa1160360 | 0.822753 | 2.001302e-53 | -8.615850e-47 |
Msa0036370 | Msa1160360 | 0.820165 | 7.923575e-53 | -8.615850e-47 |
Msa0047250 | Msa1160360 | 0.803983 | 2.686388e-49 | -8.615850e-47 |
Msa0048160 | Msa1160360 | 0.804095 | 2.546458e-49 | -8.615850e-47 |
Msa0055100 | Msa1160360 | 0.836165 | 1.098059e-56 | -8.615850e-47 |
Msa0055150 | Msa1160360 | 0.833545 | 5.014643e-56 | -8.615850e-47 |
Msa0057140 | Msa1160360 | 0.808182 | 3.511483e-50 | -8.615850e-47 |
Msa0057750 | Msa1160360 | 0.809551 | 1.788945e-50 | -8.615850e-47 |
Msa0061970 | Msa1160360 | 0.824501 | 7.800782e-54 | -8.615850e-47 |
Msa0064350 | Msa1160360 | 0.801913 | 7.195558e-49 | -8.615850e-47 |
Msa0068020 | Msa1160360 | 0.804285 | 2.324204e-49 | -8.615850e-47 |
Msa0068760 | Msa1160360 | 0.804789 | 1.824878e-49 | -8.615850e-47 |
Msa0072170 | Msa1160360 | 0.824959 | 6.082487e-54 | -8.615850e-47 |
Msa0074750 | Msa1160360 | 0.831274 | 1.831417e-55 | -8.615850e-47 |
Msa0075340 | Msa1160360 | 0.812435 | 4.245116e-51 | -8.615850e-47 |
Msa0090030 | Msa1160360 | 0.834613 | 2.708414e-56 | -8.615850e-47 |
Msa0091610 | Msa1160360 | 0.809066 | 2.273221e-50 | -8.615850e-47 |
Msa0092170 | Msa1160360 | 0.811186 | 7.942399e-51 | -8.615850e-47 |
Msa0093420 | Msa1160360 | 0.804064 | 2.584685e-49 | -8.615850e-47 |
Msa0094010 | Msa1160360 | 0.838276 | 3.166640e-57 | -8.615850e-47 |
Msa0096980 | Msa1160360 | 0.808667 | 2.767176e-50 | -8.615850e-47 |
Msa0097950 | Msa1160360 | 0.816379 | 5.701486e-52 | -8.615850e-47 |
Msa0100800 | Msa1160360 | 0.836542 | 8.806235e-57 | -8.615850e-47 |
Msa0101180 | Msa1160360 | 0.837379 | 5.382176e-57 | -8.615850e-47 |
Msa0103070 | Msa1160360 | 0.810675 | 1.024504e-50 | -8.615850e-47 |
Msa0108870 | Msa1160360 | 0.821977 | 3.030168e-53 | -8.615850e-47 |
Msa0109050 | Msa1160360 | 0.811355 | 7.297495e-51 | -8.615850e-47 |
Msa0115370 | Msa1160360 | 0.837580 | 4.778747e-57 | -8.615850e-47 |
Msa0120540 | Msa1160360 | 0.826276 | 2.965540e-54 | -8.615850e-47 |
Msa0603570 | Msa1160360 | 0.808278 | 3.350370e-50 | -8.615850e-47 |
Msa0606810 | Msa1160360 | 0.839617 | 1.423379e-57 | -8.615850e-47 |
Msa0607510 | Msa1160360 | 0.822515 | 2.273425e-53 | -8.615850e-47 |
Msa0609970 | Msa1160360 | 0.805301 | 1.426419e-49 | -8.615850e-47 |
Msa0610390 | Msa1160360 | 0.851413 | 9.022998e-61 | -8.615850e-47 |
Msa0614990 | Msa1160360 | 0.801910 | 7.205808e-49 | -8.615850e-47 |
Msa0617260 | Msa1160360 | 0.825176 | 5.406210e-54 | -8.615850e-47 |
Msa0618200 | Msa1160360 | -0.800989 | 1.112287e-48 | -8.615850e-47 |
Msa0620330 | Msa1160360 | 0.812924 | 3.318674e-51 | -8.615850e-47 |
Msa0625790 | Msa1160360 | 0.818944 | 1.504489e-52 | -8.615850e-47 |
Msa0626940 | Msa1160360 | 0.819163 | 1.341344e-52 | -8.615850e-47 |
Msa0628290 | Msa1160360 | 0.828773 | 7.459999e-55 | -8.615850e-47 |
Msa0630950 | Msa1160360 | 0.813678 | 2.266573e-51 | -8.615850e-47 |
Msa0631350 | Msa1160360 | 0.807006 | 6.241453e-50 | -8.615850e-47 |
Msa0639120 | Msa1160360 | 0.824806 | 6.612005e-54 | -8.615850e-47 |
Msa0650920 | Msa1160360 | 0.839448 | 1.574777e-57 | -8.615850e-47 |
Msa0652300 | Msa1160360 | 0.819012 | 1.451864e-52 | -8.615850e-47 |
Msa0654870 | Msa1160360 | 0.813230 | 2.843285e-51 | -8.615850e-47 |
Msa0658480 | Msa1160360 | 0.808734 | 2.678112e-50 | -8.615850e-47 |
Msa0659140 | Msa1160360 | 0.829996 | 3.765900e-55 | -8.615850e-47 |
Msa0662630 | Msa1160360 | 0.820290 | 7.414627e-53 | -8.615850e-47 |
Msa0663900 | Msa1160360 | 0.825253 | 5.183274e-54 | -8.615850e-47 |
Msa0664960 | Msa1160360 | 0.821983 | 3.020007e-53 | -8.615850e-47 |
Msa0666230 | Msa1160360 | 0.803738 | 3.021271e-49 | -8.615850e-47 |
Msa0669720 | Msa1160360 | 0.815974 | 7.021865e-52 | -8.615850e-47 |
Msa0669760 | Msa1160360 | 0.835704 | 1.437440e-56 | -8.615850e-47 |
Msa0687230 | Msa1160360 | 0.824486 | 7.864935e-54 | -8.615850e-47 |
Msa0687630 | Msa1160360 | 0.830533 | 2.784477e-55 | -8.615850e-47 |
Msa0689500 | Msa1160360 | 0.801437 | 9.010168e-49 | -8.615850e-47 |
Msa0690550 | Msa1160360 | 0.804353 | 2.250020e-49 | -8.615850e-47 |
Msa0692840 | Msa1160360 | 0.801991 | 6.934568e-49 | -8.615850e-47 |
Msa0692940 | Msa1160360 | 0.833112 | 6.430184e-56 | -8.615850e-47 |
Msa0693790 | Msa1160360 | 0.830628 | 2.638244e-55 | -8.615850e-47 |
Msa0694840 | Msa1160360 | 0.809620 | 1.728907e-50 | -8.615850e-47 |
Msa0704800 | Msa1160360 | 0.801940 | 7.101857e-49 | -8.615850e-47 |
Msa0705600 | Msa1160360 | 0.830945 | 2.205860e-55 | -8.615850e-47 |
Msa0707390 | Msa1160360 | 0.831924 | 1.266638e-55 | -8.615850e-47 |
Msa0711490 | Msa1160360 | 0.842927 | 1.917584e-58 | -8.615850e-47 |
Msa0713460 | Msa1160360 | 0.800803 | 1.214194e-48 | -8.615850e-47 |
Msa0726080 | Msa1160360 | 0.820933 | 5.278812e-53 | -8.615850e-47 |
Msa0735310 | Msa1160360 | 0.821785 | 3.355961e-53 | -8.615850e-47 |
Msa0743530 | Msa1160360 | 0.812182 | 4.821233e-51 | -8.615850e-47 |
Msa0744090 | Msa1160360 | 0.801008 | 1.102443e-48 | -8.615850e-47 |
Msa0750540 | Msa1160360 | 0.801670 | 8.070468e-49 | -8.615850e-47 |
Msa0756930 | Msa1160360 | 0.803420 | 3.515746e-49 | -8.615850e-47 |
Msa0766670 | Msa1160360 | 0.811312 | 7.457193e-51 | -8.615850e-47 |
Msa0774750 | Msa1160360 | 0.814695 | 1.351299e-51 | -8.615850e-47 |
Msa0780880 | Msa1160360 | 0.834014 | 3.828828e-56 | -8.615850e-47 |
Msa0781270 | Msa1160360 | 0.805025 | 1.628846e-49 | -8.615850e-47 |
Msa0794050 | Msa1160360 | 0.806011 | 1.011896e-49 | -8.615850e-47 |
Msa0797750 | Msa1160360 | 0.802672 | 5.020051e-49 | -8.615850e-47 |
Msa0806920 | Msa1160360 | 0.808598 | 2.863109e-50 | -8.615850e-47 |
Msa0814250 | Msa1160360 | 0.825733 | 3.989638e-54 | -8.615850e-47 |
Msa0814320 | Msa1160360 | 0.805759 | 1.142842e-49 | -8.615850e-47 |
Msa0818770 | Msa1160360 | 0.812239 | 4.685887e-51 | -8.615850e-47 |
Msa0820530 | Msa1160360 | -0.808372 | 3.198543e-50 | -8.615850e-47 |
Msa0822170 | Msa1160360 | 0.823588 | 1.277697e-53 | -8.615850e-47 |
Msa0822180 | Msa1160360 | 0.809108 | 2.227101e-50 | -8.615850e-47 |
Msa0825280 | Msa1160360 | 0.802500 | 5.448685e-49 | -8.615850e-47 |
Msa0826500 | Msa1160360 | 0.803301 | 3.720522e-49 | -8.615850e-47 |
Msa0121820 | Msa1160360 | 0.817345 | 3.460942e-52 | -8.615850e-47 |
Msa0126770 | Msa1160360 | 0.816026 | 6.836160e-52 | -8.615850e-47 |
Msa0126880 | Msa1160360 | 0.812943 | 3.287188e-51 | -8.615850e-47 |
Msa0127040 | Msa1160360 | 0.829697 | 4.451504e-55 | -8.615850e-47 |
Msa0127850 | Msa1160360 | 0.824549 | 7.601026e-54 | -8.615850e-47 |
Msa0131450 | Msa1160360 | 0.827015 | 1.975621e-54 | -8.615850e-47 |
Msa0140400 | Msa1160360 | 0.807799 | 4.236004e-50 | -8.615850e-47 |
Msa0145010 | Msa1160360 | 0.806945 | 6.427236e-50 | -8.615850e-47 |
Msa0145150 | Msa1160360 | 0.837363 | 5.434391e-57 | -8.615850e-47 |
Msa0146080 | Msa1160360 | 0.807367 | 5.232101e-50 | -8.615850e-47 |
Msa0165950 | Msa1160360 | 0.807437 | 5.057458e-50 | -8.615850e-47 |
Msa0166750 | Msa1160360 | 0.849363 | 3.393758e-60 | -8.615850e-47 |
Msa0169300 | Msa1160360 | 0.811414 | 7.085606e-51 | -8.615850e-47 |
Msa0174000 | Msa1160360 | 0.819623 | 1.053787e-52 | -8.615850e-47 |
Msa0176330 | Msa1160360 | 0.826342 | 2.858979e-54 | -8.615850e-47 |
Msa0180120 | Msa1160360 | 0.800896 | 1.162138e-48 | -8.615850e-47 |
Msa0182280 | Msa1160360 | 0.806571 | 7.711333e-50 | -8.615850e-47 |
Msa0183460 | Msa1160360 | 0.831472 | 1.637331e-55 | -8.615850e-47 |
Msa0183870 | Msa1160360 | 0.814234 | 1.709254e-51 | -8.615850e-47 |
Msa0191080 | Msa1160360 | 0.802736 | 4.868904e-49 | -8.615850e-47 |
Msa0193600 | Msa1160360 | 0.816524 | 5.291328e-52 | -8.615850e-47 |
Msa0198520 | Msa1160360 | 0.803161 | 3.978374e-49 | -8.615850e-47 |
Msa0199690 | Msa1160360 | 0.824855 | 6.439254e-54 | -8.615850e-47 |
Msa0208810 | Msa1160360 | 0.812736 | 3.648069e-51 | -8.615850e-47 |
Msa0211650 | Msa1160360 | 0.825117 | 5.584389e-54 | -8.615850e-47 |
Msa0212750 | Msa1160360 | -0.817956 | 2.520256e-52 | -8.615850e-47 |
Msa0236270 | Msa1160360 | 0.823929 | 1.062852e-53 | -8.615850e-47 |
Msa0370160 | Msa1160360 | -0.816415 | 5.595184e-52 | -8.615850e-47 |
Msa0376690 | Msa1160360 | 0.825619 | 4.245924e-54 | -8.615850e-47 |
Msa0381700 | Msa1160360 | 0.810069 | 1.384553e-50 | -8.615850e-47 |
Msa0384880 | Msa1160360 | 0.823370 | 1.436743e-53 | -8.615850e-47 |
Msa0392940 | Msa1160360 | 0.809172 | 2.157637e-50 | -8.615850e-47 |
Msa0394400 | Msa1160360 | 0.829544 | 4.851961e-55 | -8.615850e-47 |
Msa0403190 | Msa1160360 | 0.802508 | 5.425932e-49 | -8.615850e-47 |
Msa0416400 | Msa1160360 | 0.807089 | 5.992981e-50 | -8.615850e-47 |
Msa0419520 | Msa1160360 | 0.823011 | 1.742463e-53 | -8.615850e-47 |
Msa0437690 | Msa1160360 | -0.805551 | 1.263879e-49 | -8.615850e-47 |
Msa0439230 | Msa1160360 | 0.815377 | 9.536803e-52 | -8.615850e-47 |
Msa0439890 | Msa1160360 | 0.832170 | 1.101432e-55 | -8.615850e-47 |
Msa0443430 | Msa1160360 | 0.824225 | 9.057307e-54 | -8.615850e-47 |
Msa0449820 | Msa1160360 | 0.841907 | 3.574665e-58 | -8.615850e-47 |
Msa0461590 | Msa1160360 | 0.809710 | 1.653985e-50 | -8.615850e-47 |
Msa0465550 | Msa1160360 | 0.816073 | 6.674302e-52 | -8.615850e-47 |
Msa0471590 | Msa1160360 | 0.812158 | 4.879532e-51 | -8.615850e-47 |
Msa0478580 | Msa1160360 | 0.801574 | 8.443933e-49 | -8.615850e-47 |
Msa0479330 | Msa1160360 | 0.834323 | 3.202310e-56 | -8.615850e-47 |
Msa0980940 | Msa1160360 | 0.802357 | 5.829282e-49 | -8.615850e-47 |
Msa0994290 | Msa1160360 | 0.808739 | 2.670829e-50 | -8.615850e-47 |
Msa1001350 | Msa1160360 | 0.802613 | 5.162974e-49 | -8.615850e-47 |
Msa1003440 | Msa1160360 | 0.807111 | 5.928302e-50 | -8.615850e-47 |
Msa1010460 | Msa1160360 | 0.830010 | 3.736093e-55 | -8.615850e-47 |
Msa1025940 | Msa1160360 | 0.838918 | 2.161258e-57 | -8.615850e-47 |
Msa1029970 | Msa1160360 | 0.802210 | 6.251026e-49 | -8.615850e-47 |
Msa1030930 | Msa1160360 | 0.823957 | 1.046856e-53 | -8.615850e-47 |
Msa1033520 | Msa1160360 | 0.873408 | 1.504698e-67 | -8.615850e-47 |
Msa1070050 | Msa1160360 | 0.833075 | 6.566401e-56 | -8.615850e-47 |
Msa1070390 | Msa1160360 | 0.816624 | 5.023337e-52 | -8.615850e-47 |
Msa1073400 | Msa1160360 | 0.932780 | 5.088077e-95 | -8.615850e-47 |
Msa1083880 | Msa1160360 | 0.821741 | 3.436124e-53 | -8.615850e-47 |
Msa1089840 | Msa1160360 | 0.817510 | 3.177156e-52 | -8.615850e-47 |
Msa1093330 | Msa1160360 | 0.814250 | 1.695555e-51 | -8.615850e-47 |
Msa1094430 | Msa1160360 | 0.800157 | 1.644429e-48 | -8.615850e-47 |
Msa1096550 | Msa1160360 | 0.804871 | 1.754297e-49 | -8.615850e-47 |
Msa1100530 | Msa1160360 | -0.823356 | 1.447493e-53 | -8.615850e-47 |
Msa0241740 | Msa1160360 | 0.811173 | 7.990578e-51 | -8.615850e-47 |
Msa0252240 | Msa1160360 | 0.801578 | 8.428955e-49 | -8.615850e-47 |
Msa0262480 | Msa1160360 | 0.808127 | 3.608232e-50 | -8.615850e-47 |
Msa0266210 | Msa1160360 | 0.801511 | 8.698809e-49 | -8.615850e-47 |
Msa0273650 | Msa1160360 | 0.813017 | 3.166183e-51 | -8.615850e-47 |
Msa0280430 | Msa1160360 | 0.833864 | 4.174682e-56 | -8.615850e-47 |
Msa0287670 | Msa1160360 | 0.800250 | 1.573860e-48 | -8.615850e-47 |
Msa0291520 | Msa1160360 | 0.840096 | 1.068384e-57 | -8.615850e-47 |
Msa0296920 | Msa1160360 | 0.809034 | 2.310222e-50 | -8.615850e-47 |
Msa0304330 | Msa1160360 | 0.800464 | 1.423578e-48 | -8.615850e-47 |
Msa0304590 | Msa1160360 | 0.830607 | 2.670280e-55 | -8.615850e-47 |
Msa0304660 | Msa1160360 | 0.842501 | 2.488031e-58 | -8.615850e-47 |
Msa0310410 | Msa1160360 | 0.804010 | 2.652588e-49 | -8.615850e-47 |
Msa0313930 | Msa1160360 | 0.819311 | 1.241605e-52 | -8.615850e-47 |
Msa0315850 | Msa1160360 | 0.800906 | 1.156644e-48 | -8.615850e-47 |
Msa0323560 | Msa1160360 | 0.800510 | 1.393613e-48 | -8.615850e-47 |
Msa0331700 | Msa1160360 | 0.841996 | 3.385348e-58 | -8.615850e-47 |
Msa0342290 | Msa1160360 | 0.821349 | 4.234110e-53 | -8.615850e-47 |
Msa1113590 | Msa1160360 | 0.800408 | 1.461395e-48 | -8.615850e-47 |
Msa1113880 | Msa1160360 | 0.910888 | 1.130424e-82 | -8.615850e-47 |
Msa1126770 | Msa1160360 | 0.803936 | 2.748301e-49 | -8.615850e-47 |
Msa1131560 | Msa1160360 | 0.806886 | 6.615157e-50 | -8.615850e-47 |
Msa1133630 | Msa1160360 | 0.813521 | 2.453713e-51 | -8.615850e-47 |
Msa1144970 | Msa1160360 | 0.801426 | 9.053095e-49 | -8.615850e-47 |
Msa1152520 | Msa1160360 | 0.816685 | 4.868830e-52 | -8.615850e-47 |
Msa1158230 | Msa1160360 | 0.803838 | 2.879166e-49 | -8.615850e-47 |
Msa1158770 | Msa1160360 | 0.800380 | 1.481048e-48 | -8.615850e-47 |
Msa1160360 | Msa1165960 | 0.802271 | 6.073287e-49 | -8.615850e-47 |
Msa1160360 | Msa1166870 | 0.811916 | 5.509826e-51 | -8.615850e-47 |
Msa1160360 | Msa1172130 | -0.808651 | 2.789583e-50 | -8.615850e-47 |
Msa1160360 | Msa1176360 | 0.809869 | 1.528865e-50 | -8.615850e-47 |
Msa1160360 | Msa1176980 | 0.814510 | 1.485376e-51 | -8.615850e-47 |
Msa1160360 | Msa1179950 | 0.817787 | 2.751040e-52 | -8.615850e-47 |
Msa1160360 | Msa1179980 | 0.830519 | 2.805882e-55 | -8.615850e-47 |
Msa1160360 | Msa1184370 | 0.829695 | 4.458712e-55 | -8.615850e-47 |
Msa1160360 | Msa1186800 | 0.806735 | 7.119930e-50 | -8.615850e-47 |
Msa1160360 | Msa1192850 | 0.817934 | 2.549202e-52 | -8.615850e-47 |
Msa1160360 | Msa1199290 | 0.805808 | 1.116182e-49 | -8.615850e-47 |
Msa1160360 | Msa1201830 | 0.852782 | 3.683614e-61 | -8.615850e-47 |
Msa1160360 | Msa1202150 | 0.805541 | 1.270024e-49 | -8.615850e-47 |
Msa1160360 | Msa1202580 | 0.811385 | 7.189108e-51 | -8.615850e-47 |
Msa1160360 | Msa1203880 | 0.803773 | 2.970763e-49 | -8.615850e-47 |
Msa1160360 | Msa1205480 | 0.800638 | 1.312056e-48 | -8.615850e-47 |
Msa1160360 | Msa1207730 | 0.860151 | 2.521654e-63 | -8.615850e-47 |
Msa1160360 | Msa1211830 | 0.828074 | 1.100291e-54 | -8.615850e-47 |
Msa1160360 | Msa1214320 | 0.806794 | 6.917891e-50 | -8.615850e-47 |
Msa1160360 | Msa1226610 | 0.801034 | 1.089351e-48 | -8.615850e-47 |
Msa1160360 | Msa1227690 | 0.843677 | 1.209200e-58 | -8.615850e-47 |
Msa1160360 | Msa1253810 | 0.811824 | 5.769936e-51 | -8.615850e-47 |
Msa1160360 | Msa1254710 | 0.827764 | 1.306338e-54 | -8.615850e-47 |
Msa1160360 | Msa1261070 | 0.800530 | 1.380497e-48 | -8.615850e-47 |
Msa1160360 | Msa1269300 | 0.814370 | 1.594967e-51 | -8.615850e-47 |
Msa1160360 | Msa1270620 | 0.841162 | 5.615369e-58 | -8.615850e-47 |
Msa1160360 | Msa1270690 | 0.833778 | 4.385700e-56 | -8.615850e-47 |
Msa1160360 | Msa1294840 | 0.847836 | 8.984196e-60 | -8.615850e-47 |
Msa1160360 | Msa1294960 | 0.821535 | 3.835428e-53 | -8.615850e-47 |
Msa1160360 | Msa1296300 | 0.810732 | 9.958037e-51 | -8.615850e-47 |
Msa1160360 | Msa1299700 | 0.838452 | 2.851922e-57 | -8.615850e-47 |
Msa1160360 | Msa1303580 | 0.804860 | 1.763891e-49 | -8.615850e-47 |
Msa1160360 | Msa1306990 | 0.827197 | 1.786489e-54 | -8.615850e-47 |
Msa1160360 | Msa1310690 | 0.818429 | 1.969230e-52 | -8.615850e-47 |
Msa1160360 | Msa1327490 | 0.819940 | 8.917940e-53 | -8.615850e-47 |
Msa1160360 | Msa1330890 | -0.812010 | 5.257518e-51 | -8.615850e-47 |
Msa1160360 | Msa1332220 | 0.819317 | 1.237751e-52 | -8.615850e-47 |
Msa1160360 | Msa1335560 | 0.804393 | 2.207683e-49 | -8.615850e-47 |
Msa1160360 | Msa1335940 | 0.808714 | 2.704408e-50 | -8.615850e-47 |
Msa1160360 | Msa1339190 | 0.806349 | 8.588719e-50 | -8.615850e-47 |
Msa1160360 | Msa1340830 | 0.818309 | 2.096033e-52 | -8.615850e-47 |
Msa1160360 | Msa1344850 | 0.833142 | 6.318697e-56 | -8.615850e-47 |
Msa1160360 | Msa1345450 | 0.803759 | 2.991129e-49 | -8.615850e-47 |
Msa1160360 | Msa1355700 | 0.802619 | 5.147748e-49 | -8.615850e-47 |
Msa1160360 | Msa1358430 | 0.804634 | 1.965834e-49 | -8.615850e-47 |
Msa1160360 | Msa1362420 | 0.818482 | 1.915616e-52 | -8.615850e-47 |
Msa1160360 | Msa1363700 | 0.824264 | 8.867981e-54 | -8.615850e-47 |
Msa1160360 | Msa1365150 | 0.823428 | 1.392918e-53 | -8.615850e-47 |
Msa1160360 | Msa1365860 | 0.824037 | 1.002452e-53 | -8.615850e-47 |
Msa1160360 | Msa1366650 | 0.809526 | 1.811595e-50 | -8.615850e-47 |
Msa1160360 | Msa1367880 | 0.814570 | 1.440689e-51 | -8.615850e-47 |
Msa1160360 | Msa1371090 | 0.819928 | 8.976619e-53 | -8.615850e-47 |
Msa1160360 | Msa1372310 | 0.800537 | 1.375609e-48 | -8.615850e-47 |
Msa1160360 | Msa1373880 | 0.810771 | 9.766594e-51 | -8.615850e-47 |
Msa1160360 | Msa1383350 | 0.814265 | 1.682099e-51 | -8.615850e-47 |
Msa1160360 | Msa1390230 | 0.810923 | 9.053072e-51 | -8.615850e-47 |
Msa1160360 | Msa1393800 | 0.814520 | 1.477771e-51 | -8.615850e-47 |
Msa1160360 | Msa1396940 | 0.809362 | 1.964683e-50 | -8.615850e-47 |
Msa1160360 | Msa1397940 | 0.805756 | 1.144655e-49 | -8.615850e-47 |
Msa1160360 | Msa1400820 | 0.800585 | 1.345051e-48 | -8.615850e-47 |
Msa1160360 | Msa1404190 | 0.830224 | 3.312609e-55 | -8.615850e-47 |
Msa1160360 | Msa1416260 | 0.804196 | 2.426007e-49 | -8.615850e-47 |
Msa1160360 | Msa1426920 | 0.817322 | 3.501844e-52 | -8.615850e-47 |
Msa1160360 | Msa1433600 | 0.831108 | 2.012066e-55 | -8.615850e-47 |
Msa1160360 | Msa1438640 | 0.841775 | 3.872858e-58 | -8.615850e-47 |
Msa1160360 | Msa1452470 | 0.803321 | 3.686627e-49 | -8.615850e-47 |
Msa1160360 | Msa1458030 | 0.812042 | 5.171823e-51 | -8.615850e-47 |
Msa1160360 | Msa1459960 | 0.809153 | 2.177707e-50 | -8.615850e-47 |
Msa1160360 | Msa1465080 | 0.816964 | 4.214131e-52 | -8.615850e-47 |
Msa0484740 | Msa1160360 | 0.818888 | 1.549779e-52 | -8.615850e-47 |
Msa0493920 | Msa1160360 | 0.816848 | 4.474771e-52 | -8.615850e-47 |
Msa0506940 | Msa1160360 | 0.805934 | 1.050169e-49 | -8.615850e-47 |
Msa0509950 | Msa1160360 | -0.802507 | 5.429177e-49 | -8.615850e-47 |
Msa0513440 | Msa1160360 | 0.831846 | 1.324127e-55 | -8.615850e-47 |
Msa0524600 | Msa1160360 | 0.809555 | 1.785831e-50 | -8.615850e-47 |
Msa0527910 | Msa1160360 | 0.812773 | 3.581522e-51 | -8.615850e-47 |
Msa0534080 | Msa1160360 | 0.805463 | 1.318995e-49 | -8.615850e-47 |
Msa0534410 | Msa1160360 | 0.821127 | 4.762413e-53 | -8.615850e-47 |
Msa0534900 | Msa1160360 | 0.812894 | 3.370067e-51 | -8.615850e-47 |
Msa0550570 | Msa1160360 | 0.826583 | 2.505062e-54 | -8.615850e-47 |
Msa0552810 | Msa1160360 | 0.815483 | 9.034367e-52 | -8.615850e-47 |
Msa0556790 | Msa1160360 | 0.807298 | 5.412029e-50 | -8.615850e-47 |
Msa0560470 | Msa1160360 | 0.821893 | 3.169630e-53 | -8.615850e-47 |
Msa0565620 | Msa1160360 | -0.814068 | 1.859973e-51 | -8.615850e-47 |
Msa0578090 | Msa1160360 | 0.817298 | 3.545302e-52 | -8.615850e-47 |
Msa0579370 | Msa1160360 | 0.801524 | 8.645016e-49 | -8.615850e-47 |
Msa0580230 | Msa1160360 | 0.801948 | 7.076511e-49 | -8.615850e-47 |
Msa0581070 | Msa1160360 | 0.828101 | 1.084115e-54 | -8.615850e-47 |
Msa0581130 | Msa1160360 | 0.801522 | 8.652167e-49 | -8.615850e-47 |
Msa0586850 | Msa1160360 | 0.804696 | 1.908579e-49 | -8.615850e-47 |
Msa0588240 | Msa1160360 | 0.801508 | 8.712520e-49 | -8.615850e-47 |
Msa0590650 | Msa1160360 | 0.816745 | 4.721192e-52 | -8.615850e-47 |
Msa0846230 | Msa1160360 | 0.817637 | 2.974172e-52 | -8.615850e-47 |
Msa0850710 | Msa1160360 | 0.805770 | 1.136981e-49 | -8.615850e-47 |
Msa0858440 | Msa1160360 | 0.807864 | 4.104978e-50 | -8.615850e-47 |
Msa0869010 | Msa1160360 | 0.813282 | 2.769861e-51 | -8.615850e-47 |
Msa0879860 | Msa1160360 | 0.825813 | 3.819159e-54 | -8.615850e-47 |
Msa0888940 | Msa1160360 | 0.803987 | 2.681533e-49 | -8.615850e-47 |
Msa0898760 | Msa1160360 | 0.805651 | 1.204553e-49 | -8.615850e-47 |
Msa0898890 | Msa1160360 | 0.804185 | 2.439222e-49 | -8.615850e-47 |
Msa0899290 | Msa1160360 | 0.813322 | 2.714813e-51 | -8.615850e-47 |
Msa0905380 | Msa1160360 | 0.809563 | 1.779132e-50 | -8.615850e-47 |
Msa0921870 | Msa1160360 | 0.824768 | 6.749038e-54 | -8.615850e-47 |
Msa0924150 | Msa1160360 | -0.844398 | 7.750158e-59 | -8.615850e-47 |
Msa0928120 | Msa1160360 | 0.819400 | 1.184690e-52 | -8.615850e-47 |
Msa0930140 | Msa1160360 | 0.836434 | 9.377803e-57 | -8.615850e-47 |
Msa0933290 | Msa1160360 | 0.807400 | 5.150492e-50 | -8.615850e-47 |
Msa0937330 | Msa1160360 | 0.804860 | 1.763675e-49 | -8.615850e-47 |
Msa0939790 | Msa1160360 | 0.800887 | 1.166940e-48 | -8.615850e-47 |
Msa0940830 | Msa1160360 | 0.805581 | 1.245783e-49 | -8.615850e-47 |
Msa0943270 | Msa1160360 | 0.816352 | 5.780186e-52 | -8.615850e-47 |
Msa0947800 | Msa1160360 | 0.820032 | 8.495669e-53 | -8.615850e-47 |
Msa0959840 | Msa1160360 | 0.820004 | 8.625245e-53 | -8.615850e-47 |
Msa0960830 | Msa1160360 | 0.815279 | 1.002750e-51 | -8.615850e-47 |
Msa0963020 | Msa1160360 | 0.820307 | 7.349385e-53 | -8.615850e-47 |
Msa0966720 | Msa1160360 | -0.804204 | 2.417236e-49 | -8.615850e-47 |
Msa0967370 | Msa1160360 | 0.803362 | 3.614271e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1160360 | MtrunA17_Chr7g0256481 | 98.802 | 167 | 2 | 0 | 1 | 167 | 1 | 167 | 6.94e-122 | 340 |
Msa1160360 | MtrunA17_Chr5g0442081 | 63.095 | 168 | 61 | 1 | 1 | 167 | 4 | 171 | 1.68e-75 | 223 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1160360 | AT3G57090.2 | 64.706 | 170 | 57 | 1 | 1 | 167 | 1 | 170 | 9.77e-80 | 234 |
Msa1160360 | AT3G57090.1 | 64.706 | 170 | 57 | 1 | 1 | 167 | 1 | 170 | 9.77e-80 | 234 |
Msa1160360 | AT5G12390.1 | 55.357 | 168 | 67 | 2 | 1 | 163 | 1 | 165 | 1.61e-63 | 193 |
Find 55 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTATACATGCTTGGATAAT+TGG | 0.162647 | 7_4:-50262262 | Msa1160360:three_prime_UTR |
TCCTAGGAGTCGGCAGCTTC+TGG | 0.252357 | 7_4:-50263627 | Msa1160360:CDS |
AAAATTGTAGTTATCAAATA+AGG | 0.270444 | 7_4:+50262185 | None:intergenic |
ATGTATAGATTCAATTCTTT+CGG | 0.289178 | 7_4:+50262276 | None:intergenic |
TGTATAGATTCAATTCTTTC+GGG | 0.299564 | 7_4:+50262277 | None:intergenic |
ATTATGATTCGCAGCTTCTT+TGG | 0.302296 | 7_4:-50263726 | Msa1160360:intron |
GTAACTTTCCGTTGAGTTGC+AGG | 0.337755 | 7_4:-50265167 | Msa1160360:five_prime_UTR |
TTCTTGCTGTTGGGTACTAC+AGG | 0.348000 | 7_4:-50263661 | Msa1160360:CDS |
GGCATCACTGCAACAGCTGC+AGG | 0.350680 | 7_4:-50262332 | Msa1160360:CDS |
AGCTTTATCTTCTTGCTGTT+GGG | 0.356980 | 7_4:-50263670 | Msa1160360:CDS |
GCAGCTTCTGGAGCAATGTT+TGG | 0.361994 | 7_4:-50263615 | Msa1160360:CDS |
TTATGATTCGCAGCTTCTTT+GGG | 0.372741 | 7_4:-50263725 | Msa1160360:intron |
CCTTGCAGATTGCACCTGAT+TGG | 0.393005 | 7_4:-50262487 | Msa1160360:intron |
CATGGGCACTTGTTCATTCA+AGG | 0.399932 | 7_4:-50264605 | Msa1160360:CDS |
GCAGATGGTGTAATAGGAAT+TGG | 0.406309 | 7_4:-50262353 | Msa1160360:intron |
AAGCTTTATCTTCTTGCTGT+TGG | 0.416064 | 7_4:-50263671 | Msa1160360:CDS |
AGCTTCTCTCTTTGATGTAA+AGG | 0.431754 | 7_4:+50263689 | None:intergenic |
GCTCATGCAGATGGTGTAAT+AGG | 0.436512 | 7_4:-50262359 | Msa1160360:intron |
GACAATGCCTGCCTCCAATC+AGG | 0.442415 | 7_4:+50262473 | None:intergenic |
GCTTCTGGAGCAATGTTTGG+AGG | 0.445797 | 7_4:-50263612 | Msa1160360:intron |
TCCCTCGGAAACTTCTTTAC+CGG | 0.457316 | 7_4:-50265094 | Msa1160360:CDS |
GAAGTTGCAGAGGCTTCTAA+TGG | 0.471526 | 7_4:-50264669 | Msa1160360:CDS |
AAAAGTATAGAAATTAGAAA+TGG | 0.474025 | 7_4:-50265252 | None:intergenic |
GGAAGCTTCTTTGAATCCCT+CGG | 0.481996 | 7_4:-50265109 | Msa1160360:CDS |
TGCAGATTGCACCTGATTGG+AGG | 0.488276 | 7_4:-50262484 | Msa1160360:intron |
TGGTGTCATTGCTGCAGCAT+TGG | 0.513273 | 7_4:-50262300 | Msa1160360:CDS |
TCCAGAAGCTGCCGACTCCT+AGG | 0.515588 | 7_4:+50263626 | None:intergenic |
TGAGAGTTAACCGTCGTCGA+TGG | 0.516268 | 7_4:-50265143 | Msa1160360:exon |
AGTAATTATACTTTCGAGCA+TGG | 0.516555 | 7_4:+50264554 | None:intergenic |
CCGGCGGCGATCAGATCCCT+TGG | 0.523323 | 7_4:-50265075 | Msa1160360:CDS |
AGAGCATAATGAGGTTGTCA+TGG | 0.535428 | 7_4:-50264623 | Msa1160360:CDS |
ACAGGGCTACTGATTATCCT+AGG | 0.548719 | 7_4:-50263643 | Msa1160360:CDS |
GAATTGAATCTATACATGCT+TGG | 0.552208 | 7_4:-50262270 | Msa1160360:exon |
GTCGAAGAACGAATTGCAAA+GGG | 0.553821 | 7_4:-50262437 | Msa1160360:intron |
GATTGCACCTGATTGGAGGC+AGG | 0.564228 | 7_4:-50262480 | Msa1160360:CDS |
TAACTTTCCGTTGAGTTGCA+GGG | 0.573150 | 7_4:-50265166 | Msa1160360:five_prime_UTR |
CCAAGGGATCTGATCGCCGC+CGG | 0.574729 | 7_4:+50265075 | None:intergenic |
TCTTGCTGTTGGGTACTACA+GGG | 0.577328 | 7_4:-50263660 | Msa1160360:CDS |
GAGTTAACCGTCGTCGATGG+AGG | 0.584041 | 7_4:-50265140 | Msa1160360:exon |
GAGCATAATGAGGTTGTCAT+GGG | 0.590973 | 7_4:-50264622 | Msa1160360:CDS |
AGTCGAAGAACGAATTGCAA+AGG | 0.598958 | 7_4:-50262438 | Msa1160360:CDS |
CTGTGAAAGAGAAGTTGCAG+AGG | 0.603501 | 7_4:-50264679 | Msa1160360:CDS |
GCATCACTGCAACAGCTGCA+GGG | 0.604640 | 7_4:-50262331 | Msa1160360:CDS |
TGACATCACGGTCGCACCAA+GGG | 0.605500 | 7_4:+50265059 | None:intergenic |
CTACTGATTATCCTAGGAGT+CGG | 0.615715 | 7_4:-50263637 | Msa1160360:CDS |
CGCCGGTAAAGAAGTTTCCG+AGG | 0.620017 | 7_4:+50265092 | None:intergenic |
GCCGGTAAAGAAGTTTCCGA+GGG | 0.620980 | 7_4:+50265093 | None:intergenic |
ACTCTCACCCTGCAACTCAA+CGG | 0.626960 | 7_4:+50265159 | None:intergenic |
CTCGGAAACTTCTTTACCGG+CGG | 0.628306 | 7_4:-50265091 | Msa1160360:CDS |
ATGACATCACGGTCGCACCA+AGG | 0.644581 | 7_4:+50265058 | None:intergenic |
GTAAGAATGAGAGCATAATG+AGG | 0.656100 | 7_4:-50264632 | Msa1160360:CDS |
TTTCGAGCATGGCAATCCCA+CGG | 0.664812 | 7_4:+50264565 | None:intergenic |
AACAAGAAGATATTCACCGT+GGG | 0.666532 | 7_4:-50264581 | Msa1160360:CDS |
AAGTTACAGAGATGACATCA+CGG | 0.723970 | 7_4:+50265047 | None:intergenic |
CAACAAGAAGATATTCACCG+TGG | 0.736975 | 7_4:-50264582 | Msa1160360:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGAATATAAGAAAAAATATT+CGG | + | chr7_4:50262730-50262749 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTTTGTGTGTTT+TGG | + | chr7_4:50262039-50262058 | None:intergenic | 15.0% |
!! | AAAATTGTAGTTATCAAATA+AGG | + | chr7_4:50265074-50265093 | None:intergenic | 15.0% |
!!! | AACAGATAATTTTAGTTTAA+TGG | + | chr7_4:50265229-50265248 | None:intergenic | 15.0% |
!! | TACAAAAAAACAAGAAATAC+AGG | - | chr7_4:50262067-50262086 | Msa1160360:three_prime_UTR | 20.0% |
!! | TCAAAAAAGCTATTAATTTC+CGG | + | chr7_4:50262314-50262333 | None:intergenic | 20.0% |
!!! | ATTTTGATTTGTTTGAGTTT+AGG | - | chr7_4:50262434-50262453 | Msa1160360:intron | 20.0% |
!!! | TTTTGATTTGTTTGAGTTTA+GGG | - | chr7_4:50262435-50262454 | Msa1160360:intron | 20.0% |
!! | TTCTGATTATTATTCTGTAT+AGG | - | chr7_4:50262746-50262765 | Msa1160360:intron | 20.0% |
!! | AATCATATTCATATGTTCAT+TGG | - | chr7_4:50262824-50262843 | Msa1160360:intron | 20.0% |
!! | ATGCAATACAACTAAAATAA+TGG | - | chr7_4:50263092-50263111 | Msa1160360:intron | 20.0% |
!! | ATAATAATTATGGATGTACA+AGG | + | chr7_4:50263515-50263534 | None:intergenic | 20.0% |
!!! | TTTGTTTTGATTTTCTCTTT+GGG | - | chr7_4:50263786-50263805 | Msa1160360:intron | 20.0% |
!! | AAACAGTAATAAGAAAAAAC+CGG | + | chr7_4:50264500-50264519 | None:intergenic | 20.0% |
!! | TGGATCAAAATAAAATCAAT+GGG | + | chr7_4:50264557-50264576 | None:intergenic | 20.0% |
!!! | TCTTTTATCTCTAAATTTTG+AGG | - | chr7_4:50264738-50264757 | Msa1160360:intron | 20.0% |
!! | ATAGCATTAACATTAACTAA+TGG | - | chr7_4:50264867-50264886 | Msa1160360:intron | 20.0% |
!! | ATGTATAGATTCAATTCTTT+CGG | + | chr7_4:50264983-50265002 | None:intergenic | 20.0% |
!!! | TTTGCTTATTTTACTTTCAT+CGG | - | chr7_4:50265019-50265038 | Msa1160360:intron | 20.0% |
!!! | ACATTTGTTTTTTTACAAAC+GGG | + | chr7_4:50265162-50265181 | None:intergenic | 20.0% |
!!! | CACATTTGTTTTTTTACAAA+CGG | + | chr7_4:50265163-50265182 | None:intergenic | 20.0% |
! | AGAAATAACATGAATTGAGA+GGG | + | chr7_4:50262252-50262271 | None:intergenic | 25.0% |
! | AAGAAATAACATGAATTGAG+AGG | + | chr7_4:50262253-50262272 | None:intergenic | 25.0% |
! | CTCAAACAAATCAAAATTGA+GGG | + | chr7_4:50262431-50262450 | None:intergenic | 25.0% |
! | ACTCAAACAAATCAAAATTG+AGG | + | chr7_4:50262432-50262451 | None:intergenic | 25.0% |
!! | ATTTTCAATCTGGTTATGAA+AGG | + | chr7_4:50262463-50262482 | None:intergenic | 25.0% |
!! | ACCAGATTGAAAATTTTATC+TGG | - | chr7_4:50262469-50262488 | Msa1160360:CDS | 25.0% |
!! | CCAGATTGAAAATTTTATCT+GGG | - | chr7_4:50262470-50262489 | Msa1160360:CDS | 25.0% |
! | ATTATTCTGTATAGGTTCAT+TGG | - | chr7_4:50262754-50262773 | Msa1160360:intron | 25.0% |
! | CAAATTAATGTAACTTCTCT+TGG | - | chr7_4:50262979-50262998 | Msa1160360:intron | 25.0% |
! | AAAAAAACACATAGCAAGAA+AGG | + | chr7_4:50263431-50263450 | None:intergenic | 25.0% |
! | ACATCAATCATATCTCTTTA+GGG | + | chr7_4:50263460-50263479 | None:intergenic | 25.0% |
! | AACATCAATCATATCTCTTT+AGG | + | chr7_4:50263461-50263480 | None:intergenic | 25.0% |
!! | TATATTTTTCTTGCCTTTTC+TGG | - | chr7_4:50263706-50263725 | Msa1160360:CDS | 25.0% |
! | TAACAATATGAACATACACT+GGG | + | chr7_4:50263757-50263776 | None:intergenic | 25.0% |
!!! | CTTTGTTTTGATTTTCTCTT+TGG | - | chr7_4:50263785-50263804 | Msa1160360:intron | 25.0% |
! | GAACTAATTGTTGAAAAAAC+AGG | + | chr7_4:50263875-50263894 | None:intergenic | 25.0% |
! | ATAACAAATTCCTTCAGAAA+TGG | - | chr7_4:50264193-50264212 | Msa1160360:intron | 25.0% |
!!! | AATGGTTTTATATCGTTGAT+TGG | - | chr7_4:50264211-50264230 | Msa1160360:intron | 25.0% |
! | ATTGTGTTCTATAGGAAATA+TGG | + | chr7_4:50264375-50264394 | None:intergenic | 25.0% |
! | TATAGAACACAATGATTCTT+CGG | - | chr7_4:50264382-50264401 | Msa1160360:intron | 25.0% |
! | GTGGATCAAAATAAAATCAA+TGG | + | chr7_4:50264558-50264577 | None:intergenic | 25.0% |
! | TATTCACAAATATCAGCATA+AGG | + | chr7_4:50264590-50264609 | None:intergenic | 25.0% |
! | TGTATAGATTCAATTCTTTC+GGG | + | chr7_4:50264982-50265001 | None:intergenic | 25.0% |
!! | TATTTTCACTTATGTATGTG+CGG | + | chr7_4:50265129-50265148 | None:intergenic | 25.0% |
! | CCCAGATAAAATTTTCAATC+TGG | + | chr7_4:50262473-50262492 | None:intergenic | 30.0% |
!! | ATTTTATCTGGGATTATTGC+TGG | - | chr7_4:50262481-50262500 | Msa1160360:CDS | 30.0% |
TGAATTGCAAATACACTGTT+TGG | - | chr7_4:50262517-50262536 | Msa1160360:intron | 30.0% | |
!!! | TGTTCATTGCATTGTTTTGA+AGG | - | chr7_4:50262553-50262572 | Msa1160360:intron | 30.0% |
!!! | GTTCATTGCATTGTTTTGAA+GGG | - | chr7_4:50262554-50262573 | Msa1160360:intron | 30.0% |
AGTAATTATACTTTCGAGCA+TGG | + | chr7_4:50262705-50262724 | None:intergenic | 30.0% | |
TCAAAGCTATATTGCATACT+CGG | - | chr7_4:50262886-50262905 | Msa1160360:intron | 30.0% | |
! | TACATTAATTTGAGCACAAC+AGG | + | chr7_4:50262971-50262990 | None:intergenic | 30.0% |
TATCGCACAAACTTTAATGT+AGG | - | chr7_4:50263169-50263188 | Msa1160360:intron | 30.0% | |
ACAAACTTTAATGTAGGAGT+AGG | - | chr7_4:50263175-50263194 | Msa1160360:intron | 30.0% | |
TTTACTAAATTAGCGTGTGA+AGG | - | chr7_4:50263206-50263225 | Msa1160360:intron | 30.0% | |
TTACTAAATTAGCGTGTGAA+GGG | - | chr7_4:50263207-50263226 | Msa1160360:intron | 30.0% | |
TATTATGCCCTTTATATGCA+TGG | - | chr7_4:50263485-50263504 | Msa1160360:intron | 30.0% | |
GCTGCGAATCATAATAATTA+TGG | + | chr7_4:50263525-50263544 | None:intergenic | 30.0% | |
GTAACAATATGAACATACAC+TGG | + | chr7_4:50263758-50263777 | None:intergenic | 30.0% | |
GGAAAGAGATCTCAAATTAT+AGG | + | chr7_4:50263998-50264017 | None:intergenic | 30.0% | |
TGATAGCATCTTGAATAACA+AGG | + | chr7_4:50264019-50264038 | None:intergenic | 30.0% | |
TATTCAAGATGCTATCAGTT+AGG | - | chr7_4:50264022-50264041 | Msa1160360:intron | 30.0% | |
ACTGCTAATAACAAAGGAAA+GGG | + | chr7_4:50264050-50264069 | None:intergenic | 30.0% | |
TTTGTGACTGCTAATAACAA+AGG | + | chr7_4:50264056-50264075 | None:intergenic | 30.0% | |
! | TTGTTATTAGCAGTCACAAA+AGG | - | chr7_4:50264056-50264075 | Msa1160360:intron | 30.0% |
!! | AAGGAATTTGTTATCCACAA+AGG | + | chr7_4:50264187-50264206 | None:intergenic | 30.0% |
CGATATAAAACCATTTCTGA+AGG | + | chr7_4:50264206-50264225 | None:intergenic | 30.0% | |
!! | GTTTTATATCGTTGATTGGT+CGG | - | chr7_4:50264215-50264234 | Msa1160360:intron | 30.0% |
!! | TTTTAGAAGTAGATCTGTCA+AGG | - | chr7_4:50264335-50264354 | Msa1160360:intron | 30.0% |
TATAGGAAATATGGAGAATC+AGG | + | chr7_4:50264366-50264385 | None:intergenic | 30.0% | |
GAAGAATCATTGTGTTCTAT+AGG | + | chr7_4:50264383-50264402 | None:intergenic | 30.0% | |
TATTACTGTTTGTATGTGAG+TGG | - | chr7_4:50264509-50264528 | Msa1160360:intron | 30.0% | |
ATTACTGTTTGTATGTGAGT+GGG | - | chr7_4:50264510-50264529 | Msa1160360:intron | 30.0% | |
! | TTCTTCGACTGTTTTCTTAA+GGG | + | chr7_4:50264808-50264827 | None:intergenic | 30.0% |
GAATTGAATCTATACATGCT+TGG | - | chr7_4:50264986-50265005 | Msa1160360:intron | 30.0% | |
TCTATACATGCTTGGATAAT+TGG | - | chr7_4:50264994-50265013 | Msa1160360:intron | 30.0% | |
!! | GTAAACATTTTGATGTCAAC+AGG | - | chr7_4:50265041-50265060 | Msa1160360:intron | 30.0% |
AAGTTACAGAGATGACATCA+CGG | + | chr7_4:50262212-50262231 | None:intergenic | 35.0% | |
ACTCAGAATTTCAATTGTGC+CGG | - | chr7_4:50262292-50262311 | Msa1160360:CDS | 35.0% | |
! | AAAATTGAGGGCGCAAAATA+TGG | + | chr7_4:50262419-50262438 | None:intergenic | 35.0% |
! | GTAAGAATGAGAGCATAATG+AGG | - | chr7_4:50262624-50262643 | Msa1160360:intron | 35.0% |
AACAAGAAGATATTCACCGT+GGG | - | chr7_4:50262675-50262694 | Msa1160360:intron | 35.0% | |
ATCACAAGACGTAGAATAGA+CGG | + | chr7_4:50262855-50262874 | None:intergenic | 35.0% | |
TTCTACGTCTTGTGATTTCT+TGG | - | chr7_4:50262859-50262878 | Msa1160360:intron | 35.0% | |
ACAACTAGCAATGAAGACAT+TGG | + | chr7_4:50263017-50263036 | None:intergenic | 35.0% | |
TTCGAATTATTCATTCAGGC+TGG | + | chr7_4:50263052-50263071 | None:intergenic | 35.0% | |
GCAGTTCGAATTATTCATTC+AGG | + | chr7_4:50263056-50263075 | None:intergenic | 35.0% | |
ACTTTAATGTAGGAGTAGGA+CGG | - | chr7_4:50263179-50263198 | Msa1160360:intron | 35.0% | |
TCAAGCTGGTCCAATTATAA+TGG | + | chr7_4:50263235-50263254 | None:intergenic | 35.0% | |
AGCTTGAGAGGAAAATCTAA+CGG | - | chr7_4:50263248-50263267 | Msa1160360:intron | 35.0% | |
AAACACATAGCAAGAAAGGA+GGG | + | chr7_4:50263427-50263446 | None:intergenic | 35.0% | |
AAAACACATAGCAAGAAAGG+AGG | + | chr7_4:50263428-50263447 | None:intergenic | 35.0% | |
ATTATGATTCGCAGCTTCTT+TGG | - | chr7_4:50263530-50263549 | Msa1160360:intron | 35.0% | |
TTATGATTCGCAGCTTCTTT+GGG | - | chr7_4:50263531-50263550 | Msa1160360:intron | 35.0% | |
AGCTTCTCTCTTTGATGTAA+AGG | + | chr7_4:50263570-50263589 | None:intergenic | 35.0% | |
! | AAGCTTTATCTTCTTGCTGT+TGG | - | chr7_4:50263585-50263604 | Msa1160360:intron | 35.0% |
!! | AGCTTTATCTTCTTGCTGTT+GGG | - | chr7_4:50263586-50263605 | Msa1160360:intron | 35.0% |
TGGATATTGGATACTTCACA+AGG | + | chr7_4:50263820-50263839 | None:intergenic | 35.0% | |
GATACATTGTCTATGTGATG+TGG | - | chr7_4:50263913-50263932 | Msa1160360:intron | 35.0% | |
! | TGTGATGTGGATACTTTTGT+TGG | - | chr7_4:50263926-50263945 | Msa1160360:intron | 35.0% |
! | GTGATGTGGATACTTTTGTT+GGG | - | chr7_4:50263927-50263946 | Msa1160360:intron | 35.0% |
GACTGCTAATAACAAAGGAA+AGG | + | chr7_4:50264051-50264070 | None:intergenic | 35.0% | |
TTTAATAAACCCAGCTGGAT+TGG | - | chr7_4:50264082-50264101 | Msa1160360:intron | 35.0% | |
CTTCTTAGTGAGAGGTTTAT+TGG | - | chr7_4:50264156-50264175 | Msa1160360:intron | 35.0% | |
GTTTATTGGACAATCCTTTG+TGG | - | chr7_4:50264170-50264189 | Msa1160360:intron | 35.0% | |
TCCATGCCTGTTATTACATA+TGG | - | chr7_4:50264407-50264426 | Msa1160360:intron | 35.0% | |
CCATGCCTGTTATTACATAT+GGG | - | chr7_4:50264408-50264427 | Msa1160360:intron | 35.0% | |
GCTTTCCCATATGTAATAAC+AGG | + | chr7_4:50264416-50264435 | None:intergenic | 35.0% | |
! | AAAAAACCGGCTCTCTAATA+TGG | + | chr7_4:50264487-50264506 | None:intergenic | 35.0% |
AGTCCTTTGTCTAACATGAA+CGG | - | chr7_4:50264700-50264719 | Msa1160360:intron | 35.0% | |
! | GTTCTTCGACTGTTTTCTTA+AGG | + | chr7_4:50264809-50264828 | None:intergenic | 35.0% |
! | TAACTTTCCGTTGAGTTGCA+GGG | - | chr7_4:50262090-50262109 | Msa1160360:three_prime_UTR | 40.0% |
! | ATCTGGGATTATTGCTGGAA+TGG | - | chr7_4:50262486-50262505 | Msa1160360:intron | 40.0% |
AGAGCATAATGAGGTTGTCA+TGG | - | chr7_4:50262633-50262652 | Msa1160360:intron | 40.0% | |
GAGCATAATGAGGTTGTCAT+GGG | - | chr7_4:50262634-50262653 | Msa1160360:intron | 40.0% | |
CAACAAGAAGATATTCACCG+TGG | - | chr7_4:50262674-50262693 | Msa1160360:intron | 40.0% | |
TCACAAGACGTAGAATAGAC+GGG | + | chr7_4:50262854-50262873 | None:intergenic | 40.0% | |
TAGCAGCTATATGTGACAGA+AGG | + | chr7_4:50262933-50262952 | None:intergenic | 40.0% | |
!! | GTGAAGGGCACCATTATAAT+TGG | - | chr7_4:50263222-50263241 | Msa1160360:intron | 40.0% |
TATAATTGGACCAGCTTGAG+AGG | - | chr7_4:50263236-50263255 | Msa1160360:intron | 40.0% | |
! | GTTAGATTTTCCTCTCAAGC+TGG | + | chr7_4:50263249-50263268 | None:intergenic | 40.0% |
!! | GTTGGAGGAAGTTTTGATCA+TGG | + | chr7_4:50263284-50263303 | None:intergenic | 40.0% |
AGGTCAGCCATGCATATAAA+GGG | + | chr7_4:50263495-50263514 | None:intergenic | 40.0% | |
AAGGTCAGCCATGCATATAA+AGG | + | chr7_4:50263496-50263515 | None:intergenic | 40.0% | |
! | CTACTGATTATCCTAGGAGT+CGG | - | chr7_4:50263619-50263638 | Msa1160360:CDS | 40.0% |
TGATGATCTGACACCAGAAA+AGG | + | chr7_4:50263722-50263741 | None:intergenic | 40.0% | |
AGAGTCAACACAGTGGATAT+TGG | + | chr7_4:50263833-50263852 | None:intergenic | 40.0% | |
! | GGACTTTTAATAAACCCAGC+TGG | - | chr7_4:50264077-50264096 | Msa1160360:intron | 40.0% |
TGGCTTAGTAGAAACATGCT+AGG | - | chr7_4:50264102-50264121 | Msa1160360:intron | 40.0% | |
CAGACATACTTCTTAGTGAG+AGG | - | chr7_4:50264148-50264167 | Msa1160360:intron | 40.0% | |
! | ATATCGTTGATTGGTCGGTA+TGG | - | chr7_4:50264220-50264239 | Msa1160360:intron | 40.0% |
ACGTGATTGTTTACGAAAGC+AGG | - | chr7_4:50264244-50264263 | Msa1160360:intron | 40.0% | |
TGATTGTTTACGAAAGCAGG+AGG | - | chr7_4:50264247-50264266 | Msa1160360:intron | 40.0% | |
CCCATATGTAATAACAGGCA+TGG | + | chr7_4:50264411-50264430 | None:intergenic | 40.0% | |
ATGGGAAAGCTGATAACACT+AGG | - | chr7_4:50264426-50264445 | Msa1160360:intron | 40.0% | |
TGTTCACCATATTAGAGAGC+CGG | - | chr7_4:50264478-50264497 | Msa1160360:intron | 40.0% | |
CAGCATAAGGTCATTAGTAG+TGG | + | chr7_4:50264577-50264596 | None:intergenic | 40.0% | |
GAACCGTTCATGTTAGACAA+AGG | + | chr7_4:50264706-50264725 | None:intergenic | 40.0% | |
AGTCGAAGAACGAATTGCAA+AGG | - | chr7_4:50264818-50264837 | Msa1160360:intron | 40.0% | |
GTCGAAGAACGAATTGCAAA+GGG | - | chr7_4:50264819-50264838 | Msa1160360:intron | 40.0% | |
GCAGATGGTGTAATAGGAAT+TGG | - | chr7_4:50264903-50264922 | Msa1160360:intron | 40.0% | |
! | GTAACTTTCCGTTGAGTTGC+AGG | - | chr7_4:50262089-50262108 | Msa1160360:three_prime_UTR | 45.0% |
!! | ATTTTAGCCTCCATCGACGA+CGG | + | chr7_4:50262126-50262145 | None:intergenic | 45.0% |
TCGTCGATGGAGGCTAAAAT+CGG | - | chr7_4:50262126-50262145 | Msa1160360:three_prime_UTR | 45.0% | |
GGAAGCTTCTTTGAATCCCT+CGG | - | chr7_4:50262147-50262166 | Msa1160360:three_prime_UTR | 45.0% | |
TCCCTCGGAAACTTCTTTAC+CGG | - | chr7_4:50262162-50262181 | Msa1160360:three_prime_UTR | 45.0% | |
TGGGATTATTGCTGGAATGG+TGG | - | chr7_4:50262489-50262508 | Msa1160360:intron | 45.0% | |
CTGTGAAAGAGAAGTTGCAG+AGG | - | chr7_4:50262577-50262596 | Msa1160360:intron | 45.0% | |
GAAGTTGCAGAGGCTTCTAA+TGG | - | chr7_4:50262587-50262606 | Msa1160360:intron | 45.0% | |
CATGGGCACTTGTTCATTCA+AGG | - | chr7_4:50262651-50262670 | Msa1160360:intron | 45.0% | |
TTAATGTAGGAGTAGGACGG+TGG | - | chr7_4:50263182-50263201 | Msa1160360:intron | 45.0% | |
AGAAGTCTGCTTTGCATCGT+TGG | + | chr7_4:50263302-50263321 | None:intergenic | 45.0% | |
! | AGATCAGCCTGAGATGCTTT+TGG | - | chr7_4:50263360-50263379 | Msa1160360:intron | 45.0% |
!! | ATTCACGCCAAAAGCATCTC+AGG | + | chr7_4:50263370-50263389 | None:intergenic | 45.0% |
TTAGACAACTTCCTCGCCTT+AGG | - | chr7_4:50263390-50263409 | Msa1160360:intron | 45.0% | |
TAGACAACTTCCTCGCCTTA+GGG | - | chr7_4:50263391-50263410 | Msa1160360:intron | 45.0% | |
!! | TTCTTGCTGTTGGGTACTAC+AGG | - | chr7_4:50263595-50263614 | Msa1160360:intron | 45.0% |
!! | TCTTGCTGTTGGGTACTACA+GGG | - | chr7_4:50263596-50263615 | Msa1160360:intron | 45.0% |
! | ACAGGGCTACTGATTATCCT+AGG | - | chr7_4:50263613-50263632 | Msa1160360:CDS | 45.0% |
! | TGGATACTTTTGTTGGGCGT+TGG | - | chr7_4:50263933-50263952 | Msa1160360:intron | 45.0% |
! | GGATACTTTTGTTGGGCGTT+GGG | - | chr7_4:50263934-50263953 | Msa1160360:intron | 45.0% |
TCTACTAAGCCAATCCAGCT+GGG | + | chr7_4:50264094-50264113 | None:intergenic | 45.0% | |
TTCTACTAAGCCAATCCAGC+TGG | + | chr7_4:50264095-50264114 | None:intergenic | 45.0% | |
GCTCATGCAGATGGTGTAAT+AGG | - | chr7_4:50264897-50264916 | Msa1160360:intron | 45.0% | |
!!! | TTAATATTTTTTTATTTGTT+AGG | - | chr7_4:50265093-50265112 | Msa1160360:CDS | 5.0% |
ACTCTCACCCTGCAACTCAA+CGG | + | chr7_4:50262100-50262119 | None:intergenic | 50.0% | |
TGAGAGTTAACCGTCGTCGA+TGG | - | chr7_4:50262113-50262132 | Msa1160360:three_prime_UTR | 50.0% | |
GCCGGTAAAGAAGTTTCCGA+GGG | + | chr7_4:50262166-50262185 | None:intergenic | 50.0% | |
CTCGGAAACTTCTTTACCGG+CGG | - | chr7_4:50262165-50262184 | Msa1160360:three_prime_UTR | 50.0% | |
TTTCGAGCATGGCAATCCCA+CGG | + | chr7_4:50262694-50262713 | None:intergenic | 50.0% | |
AGTCTGCTTTGCATCGTTGG+AGG | + | chr7_4:50263299-50263318 | None:intergenic | 50.0% | |
!! | GCAGCTTCTGGAGCAATGTT+TGG | - | chr7_4:50263641-50263660 | Msa1160360:CDS | 50.0% |
!! | GCTTCTGGAGCAATGTTTGG+AGG | - | chr7_4:50263644-50263663 | Msa1160360:CDS | 50.0% |
! | CCAGTCTAGAGTCAACACAG+TGG | + | chr7_4:50263840-50263859 | None:intergenic | 50.0% |
!! | CCACTGTGTTGACTCTAGAC+TGG | - | chr7_4:50263837-50263856 | Msa1160360:intron | 50.0% |
AACATGCTAGGTCTGCGAGT+AGG | - | chr7_4:50264114-50264133 | Msa1160360:intron | 50.0% | |
CGAAAGCAGGAGGATACATG+TGG | - | chr7_4:50264257-50264276 | Msa1160360:intron | 50.0% | |
CAGGTGCAATCTGCAAGGAT+AGG | + | chr7_4:50264767-50264786 | None:intergenic | 50.0% | |
CCAATCAGGTGCAATCTGCA+AGG | + | chr7_4:50264772-50264791 | None:intergenic | 50.0% | |
CCTTGCAGATTGCACCTGAT+TGG | - | chr7_4:50264769-50264788 | Msa1160360:intron | 50.0% | |
TGCAGATTGCACCTGATTGG+AGG | - | chr7_4:50264772-50264791 | Msa1160360:intron | 50.0% | |
! | ACAGCTGCAGGGCTTTTAGT+TGG | - | chr7_4:50264936-50264955 | Msa1160360:intron | 50.0% |
!! | TGGTGTCATTGCTGCAGCAT+TGG | - | chr7_4:50264956-50264975 | Msa1160360:intron | 50.0% |
GAGTTAACCGTCGTCGATGG+AGG | - | chr7_4:50262116-50262135 | Msa1160360:three_prime_UTR | 55.0% | |
CGCCGGTAAAGAAGTTTCCG+AGG | + | chr7_4:50262167-50262186 | None:intergenic | 55.0% | |
TGACATCACGGTCGCACCAA+GGG | + | chr7_4:50262200-50262219 | None:intergenic | 55.0% | |
ATGACATCACGGTCGCACCA+AGG | + | chr7_4:50262201-50262220 | None:intergenic | 55.0% | |
! | CCACTTCGGTGGCGTTTTGA+AGG | + | chr7_4:50263119-50263138 | None:intergenic | 55.0% |
CCTTCAAAACGCCACCGAAG+TGG | - | chr7_4:50263116-50263135 | Msa1160360:intron | 55.0% | |
CAATGACCCCAGAGCCACTT+CGG | + | chr7_4:50263133-50263152 | None:intergenic | 55.0% | |
CAAGAAAGGAGGGACTGCAG+TGG | + | chr7_4:50263417-50263436 | None:intergenic | 55.0% | |
GATTGCACCTGATTGGAGGC+AGG | - | chr7_4:50264776-50264795 | Msa1160360:intron | 55.0% | |
GACAATGCCTGCCTCCAATC+AGG | + | chr7_4:50264786-50264805 | None:intergenic | 55.0% | |
GGCTTGTGTGCTCATGCAGA+TGG | - | chr7_4:50264888-50264907 | Msa1160360:intron | 55.0% | |
GCATCACTGCAACAGCTGCA+GGG | - | chr7_4:50264925-50264944 | Msa1160360:intron | 55.0% | |
AAACGCCACCGAAGTGGCTC+TGG | - | chr7_4:50263122-50263141 | Msa1160360:intron | 60.0% | |
AACGCCACCGAAGTGGCTCT+GGG | - | chr7_4:50263123-50263142 | Msa1160360:intron | 60.0% | |
TCCTAGGAGTCGGCAGCTTC+TGG | - | chr7_4:50263629-50263648 | Msa1160360:CDS | 60.0% | |
!! | TCCAGAAGCTGCCGACTCCT+AGG | + | chr7_4:50263633-50263652 | None:intergenic | 60.0% |
GGCATCACTGCAACAGCTGC+AGG | - | chr7_4:50264924-50264943 | Msa1160360:intron | 60.0% | |
CCAAGGGATCTGATCGCCGC+CGG | + | chr7_4:50262184-50262203 | None:intergenic | 65.0% | |
! | ACGCCACCGAAGTGGCTCTG+GGG | - | chr7_4:50263124-50263143 | Msa1160360:intron | 65.0% |
TGACCCCAGAGCCACTTCGG+TGG | + | chr7_4:50263130-50263149 | None:intergenic | 65.0% | |
ACTGCAGTGGCCCTAAGGCG+AGG | + | chr7_4:50263404-50263423 | None:intergenic | 65.0% | |
GAGGGACTGCAGTGGCCCTA+AGG | + | chr7_4:50263409-50263428 | None:intergenic | 65.0% | |
CCGGCGGCGATCAGATCCCT+TGG | - | chr7_4:50262181-50262200 | Msa1160360:three_prime_UTR | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 50262010 | 50265268 | 50262010 | ID=Msa1160360;Name=Msa1160360 |
chr7_4 | mRNA | 50262010 | 50265268 | 50262010 | ID=Msa1160360-mRNA-1;Parent=Msa1160360;Name=Msa1160360-mRNA-1;_AED=0.41;_eAED=0.41;_QI=122|1|1|1|1|1|5|276|167 |
chr7_4 | exon | 50262010 | 50262371 | 50262010 | ID=Msa1160360-mRNA-1:exon:13952;Parent=Msa1160360-mRNA-1 |
chr7_4 | exon | 50262438 | 50262501 | 50262438 | ID=Msa1160360-mRNA-1:exon:13951;Parent=Msa1160360-mRNA-1 |
chr7_4 | exon | 50263613 | 50263734 | 50263613 | ID=Msa1160360-mRNA-1:exon:13950;Parent=Msa1160360-mRNA-1 |
chr7_4 | exon | 50264565 | 50264703 | 50264565 | ID=Msa1160360-mRNA-1:exon:13949;Parent=Msa1160360-mRNA-1 |
chr7_4 | exon | 50265054 | 50265268 | 50265054 | ID=Msa1160360-mRNA-1:exon:13948;Parent=Msa1160360-mRNA-1 |
chr7_4 | five_prime_UTR | 50265147 | 50265268 | 50265147 | ID=Msa1160360-mRNA-1:five_prime_utr;Parent=Msa1160360-mRNA-1 |
chr7_4 | CDS | 50265054 | 50265146 | 50265054 | ID=Msa1160360-mRNA-1:cds;Parent=Msa1160360-mRNA-1 |
chr7_4 | CDS | 50264565 | 50264703 | 50264565 | ID=Msa1160360-mRNA-1:cds;Parent=Msa1160360-mRNA-1 |
chr7_4 | CDS | 50263613 | 50263734 | 50263613 | ID=Msa1160360-mRNA-1:cds;Parent=Msa1160360-mRNA-1 |
chr7_4 | CDS | 50262438 | 50262501 | 50262438 | ID=Msa1160360-mRNA-1:cds;Parent=Msa1160360-mRNA-1 |
chr7_4 | CDS | 50262286 | 50262371 | 50262286 | ID=Msa1160360-mRNA-1:cds;Parent=Msa1160360-mRNA-1 |
chr7_4 | three_prime_UTR | 50262010 | 50262285 | 50262010 | ID=Msa1160360-mRNA-1:three_prime_utr;Parent=Msa1160360-mRNA-1 |
Gene Sequence |
Protein sequence |