Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591540 | AFK33934.1 | 96.429 | 84 | 3 | 0 | 1 | 84 | 1 | 84 | 1.17e-52 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591540 | sp|Q84TF0|AKRCA_ARATH | 76.829 | 82 | 19 | 0 | 3 | 84 | 2 | 83 | 2.81e-39 | 134 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591540 | I3S0Z2 | 96.429 | 84 | 3 | 0 | 1 | 84 | 1 | 84 | 5.59e-53 | 172 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0591540 | -0.815873 | 7.395948e-52 | -8.615850e-47 |
| Msa0005350 | Msa0591540 | 0.800841 | 1.192725e-48 | -8.615850e-47 |
| Msa0006550 | Msa0591540 | 0.803598 | 3.228910e-49 | -8.615850e-47 |
| Msa0008410 | Msa0591540 | 0.813943 | 1.981969e-51 | -8.615850e-47 |
| Msa0014800 | Msa0591540 | 0.810533 | 1.099488e-50 | -8.615850e-47 |
| Msa0036370 | Msa0591540 | 0.803233 | 3.843388e-49 | -8.615850e-47 |
| Msa0041970 | Msa0591540 | 0.825091 | 5.662003e-54 | -8.615850e-47 |
| Msa0047980 | Msa0591540 | 0.821826 | 3.284208e-53 | -8.615850e-47 |
| Msa0053900 | Msa0591540 | 0.809354 | 1.972278e-50 | -8.615850e-47 |
| Msa0072170 | Msa0591540 | 0.819221 | 1.301701e-52 | -8.615850e-47 |
| Msa0073670 | Msa0591540 | 0.806821 | 6.829823e-50 | -8.615850e-47 |
| Msa0081230 | Msa0591540 | 0.812130 | 4.948711e-51 | -8.615850e-47 |
| Msa0092170 | Msa0591540 | 0.800351 | 1.501018e-48 | -8.615850e-47 |
| Msa0094920 | Msa0591540 | 0.816719 | 4.782844e-52 | -8.615850e-47 |
| Msa0095010 | Msa0591540 | 0.809875 | 1.524112e-50 | -8.615850e-47 |
| Msa0095380 | Msa0591540 | 0.801641 | 8.182118e-49 | -8.615850e-47 |
| Msa0099510 | Msa0591540 | 0.808178 | 3.518990e-50 | -8.615850e-47 |
| Msa0120340 | Msa0591540 | 0.827575 | 1.450380e-54 | -8.615850e-47 |
| Msa0120540 | Msa0591540 | 0.816136 | 6.461060e-52 | -8.615850e-47 |
| Msa0127040 | Msa0591540 | 0.802535 | 5.356473e-49 | -8.615850e-47 |
| Msa0136390 | Msa0591540 | 0.807476 | 4.960729e-50 | -8.615850e-47 |
| Msa0137820 | Msa0591540 | 0.805065 | 1.597698e-49 | -8.615850e-47 |
| Msa0148360 | Msa0591540 | 0.805214 | 1.487416e-49 | -8.615850e-47 |
| Msa0178990 | Msa0591540 | 0.822163 | 2.743566e-53 | -8.615850e-47 |
| Msa0194480 | Msa0591540 | 0.813048 | 3.116663e-51 | -8.615850e-47 |
| Msa0236270 | Msa0591540 | 0.803910 | 2.781789e-49 | -8.615850e-47 |
| Msa0236980 | Msa0591540 | 0.802419 | 5.662036e-49 | -8.615850e-47 |
| Msa0372670 | Msa0591540 | 0.800019 | 1.754015e-48 | -8.615850e-47 |
| Msa0377530 | Msa0591540 | 0.804224 | 2.393753e-49 | -8.615850e-47 |
| Msa0378980 | Msa0591540 | 0.805801 | 1.119966e-49 | -8.615850e-47 |
| Msa0380040 | Msa0591540 | 0.803574 | 3.266336e-49 | -8.615850e-47 |
| Msa0381000 | Msa0591540 | 0.804181 | 2.443810e-49 | -8.615850e-47 |
| Msa0381080 | Msa0591540 | 0.812305 | 4.533031e-51 | -8.615850e-47 |
| Msa0392940 | Msa0591540 | 0.820386 | 7.048261e-53 | -8.615850e-47 |
| Msa0419640 | Msa0591540 | -0.841918 | 3.550300e-58 | -8.615850e-47 |
| Msa0426330 | Msa0591540 | 0.814213 | 1.727518e-51 | -8.615850e-47 |
| Msa0426810 | Msa0591540 | 0.802528 | 5.375884e-49 | -8.615850e-47 |
| Msa0427220 | Msa0591540 | 0.809853 | 1.540550e-50 | -8.615850e-47 |
| Msa0448750 | Msa0591540 | 0.806411 | 8.336287e-50 | -8.615850e-47 |
| Msa0449820 | Msa0591540 | 0.828831 | 7.222916e-55 | -8.615850e-47 |
| Msa0449830 | Msa0591540 | 0.808082 | 3.688135e-50 | -8.615850e-47 |
| Msa0260210 | Msa0591540 | 0.809840 | 1.550519e-50 | -8.615850e-47 |
| Msa0281360 | Msa0591540 | 0.830024 | 3.705581e-55 | -8.615850e-47 |
| Msa0284820 | Msa0591540 | 0.834213 | 3.413526e-56 | -8.615850e-47 |
| Msa0289400 | Msa0591540 | 0.805900 | 1.067872e-49 | -8.615850e-47 |
| Msa0291520 | Msa0591540 | 0.810936 | 8.996147e-51 | -8.615850e-47 |
| Msa0304290 | Msa0591540 | 0.818250 | 2.162361e-52 | -8.615850e-47 |
| Msa0304330 | Msa0591540 | 0.819442 | 1.159202e-52 | -8.615850e-47 |
| Msa0305890 | Msa0591540 | 0.811914 | 5.515017e-51 | -8.615850e-47 |
| Msa0323560 | Msa0591540 | 0.813242 | 2.826140e-51 | -8.615850e-47 |
| Msa0327410 | Msa0591540 | 0.816734 | 4.746913e-52 | -8.615850e-47 |
| Msa0328210 | Msa0591540 | 0.818361 | 2.040708e-52 | -8.615850e-47 |
| Msa0340810 | Msa0591540 | 0.809742 | 1.627967e-50 | -8.615850e-47 |
| Msa0485120 | Msa0591540 | 0.806002 | 1.016019e-49 | -8.615850e-47 |
| Msa0489030 | Msa0591540 | 0.817231 | 3.671388e-52 | -8.615850e-47 |
| Msa0489100 | Msa0591540 | 0.806650 | 7.420595e-50 | -8.615850e-47 |
| Msa0493920 | Msa0591540 | 0.812612 | 3.884039e-51 | -8.615850e-47 |
| Msa0513440 | Msa0591540 | 0.820851 | 5.512128e-53 | -8.615850e-47 |
| Msa0517490 | Msa0591540 | 0.803045 | 4.204156e-49 | -8.615850e-47 |
| Msa0534410 | Msa0591540 | 0.823776 | 1.154741e-53 | -8.615850e-47 |
| Msa0560470 | Msa0591540 | 0.835922 | 1.265257e-56 | -8.615850e-47 |
| Msa0571700 | Msa0591540 | 0.801339 | 9.435190e-49 | -8.615850e-47 |
| Msa0585900 | Msa0591540 | 0.810242 | 1.270280e-50 | -8.615850e-47 |
| Msa0588240 | Msa0591540 | 0.815165 | 1.062848e-51 | -8.615850e-47 |
| Msa0590650 | Msa0591540 | 0.834972 | 2.200363e-56 | -8.615850e-47 |
| Msa0591060 | Msa0591540 | 0.807816 | 4.201790e-50 | -8.615850e-47 |
| Msa0591540 | Msa0598460 | 0.813836 | 2.092294e-51 | -8.615850e-47 |
| Msa0591540 | Msa0607510 | 0.803250 | 3.813261e-49 | -8.615850e-47 |
| Msa0591540 | Msa0617260 | 0.800920 | 1.149373e-48 | -8.615850e-47 |
| Msa0591540 | Msa0625790 | 0.827786 | 1.290592e-54 | -8.615850e-47 |
| Msa0591540 | Msa0628740 | 0.809805 | 1.577943e-50 | -8.615850e-47 |
| Msa0591540 | Msa0630950 | 0.800608 | 1.330908e-48 | -8.615850e-47 |
| Msa0591540 | Msa0638690 | 0.800994 | 1.109719e-48 | -8.615850e-47 |
| Msa0591540 | Msa0639120 | 0.829263 | 5.676423e-55 | -8.615850e-47 |
| Msa0591540 | Msa0650190 | 0.820616 | 6.241984e-53 | -8.615850e-47 |
| Msa0591540 | Msa0657460 | -0.801661 | 8.103982e-49 | -8.615850e-47 |
| Msa0591540 | Msa0663900 | 0.819464 | 1.145917e-52 | -8.615850e-47 |
| Msa0591540 | Msa0666140 | 0.809150 | 2.180932e-50 | -8.615850e-47 |
| Msa0591540 | Msa0669850 | 0.800430 | 1.446601e-48 | -8.615850e-47 |
| Msa0591540 | Msa0670270 | 0.805506 | 1.291872e-49 | -8.615850e-47 |
| Msa0591540 | Msa0673470 | 0.819016 | 1.448749e-52 | -8.615850e-47 |
| Msa0591540 | Msa0690550 | 0.803828 | 2.893488e-49 | -8.615850e-47 |
| Msa0591540 | Msa0692110 | 0.813379 | 2.637592e-51 | -8.615850e-47 |
| Msa0591540 | Msa0711490 | 0.822108 | 2.825695e-53 | -8.615850e-47 |
| Msa0591540 | Msa0713460 | 0.803782 | 2.957803e-49 | -8.615850e-47 |
| Msa0591540 | Msa0713820 | 0.817398 | 3.366369e-52 | -8.615850e-47 |
| Msa0591540 | Msa0718740 | 0.806671 | 7.346888e-50 | -8.615850e-47 |
| Msa0591540 | Msa0726830 | 0.818185 | 2.236654e-52 | -8.615850e-47 |
| Msa0591540 | Msa0726860 | 0.830643 | 2.615869e-55 | -8.615850e-47 |
| Msa0591540 | Msa0735310 | 0.800155 | 1.645999e-48 | -8.615850e-47 |
| Msa0591540 | Msa0761890 | 0.811099 | 8.294740e-51 | -8.615850e-47 |
| Msa0591540 | Msa0767100 | 0.807724 | 4.395287e-50 | -8.615850e-47 |
| Msa0591540 | Msa0792090 | 0.827271 | 1.715400e-54 | -8.615850e-47 |
| Msa0591540 | Msa0793720 | 0.805532 | 1.275828e-49 | -8.615850e-47 |
| Msa0591540 | Msa0794320 | 0.806367 | 8.514397e-50 | -8.615850e-47 |
| Msa0591540 | Msa0797750 | 0.828335 | 9.517683e-55 | -8.615850e-47 |
| Msa0591540 | Msa0814320 | 0.806963 | 6.370840e-50 | -8.615850e-47 |
| Msa0591540 | Msa0820530 | -0.803132 | 4.032806e-49 | -8.615850e-47 |
| Msa0591540 | Msa0835280 | 0.806075 | 9.809765e-50 | -8.615850e-47 |
| Msa0591540 | Msa0835730 | 0.804139 | 2.493383e-49 | -8.615850e-47 |
| Msa0591540 | Msa0877410 | 0.807597 | 4.676087e-50 | -8.615850e-47 |
| Msa0591540 | Msa0882510 | 0.810087 | 1.371950e-50 | -8.615850e-47 |
| Msa0591540 | Msa0891600 | -0.802533 | 5.362935e-49 | -8.615850e-47 |
| Msa0591540 | Msa0900630 | 0.805093 | 1.576283e-49 | -8.615850e-47 |
| Msa0591540 | Msa0908170 | 0.803771 | 2.974057e-49 | -8.615850e-47 |
| Msa0591540 | Msa0930140 | 0.830684 | 2.557196e-55 | -8.615850e-47 |
| Msa0591540 | Msa0931950 | 0.811204 | 7.868230e-51 | -8.615850e-47 |
| Msa0591540 | Msa0939790 | 0.811586 | 6.500189e-51 | -8.615850e-47 |
| Msa0591540 | Msa0959010 | 0.807858 | 4.116117e-50 | -8.615850e-47 |
| Msa0591540 | Msa0960160 | 0.818876 | 1.559213e-52 | -8.615850e-47 |
| Msa0591540 | Msa0976330 | 0.819184 | 1.327138e-52 | -8.615850e-47 |
| Msa0591540 | Msa0993530 | 0.819074 | 1.405712e-52 | -8.615850e-47 |
| Msa0591540 | Msa1092090 | 0.800631 | 1.316565e-48 | -8.615850e-47 |
| Msa0591540 | Msa1097840 | 0.822309 | 2.537675e-53 | -8.615850e-47 |
| Msa0591540 | Msa1116690 | 0.801850 | 7.412931e-49 | -8.615850e-47 |
| Msa0591540 | Msa1122780 | 0.801896 | 7.252193e-49 | -8.615850e-47 |
| Msa0591540 | Msa1125470 | 0.802467 | 5.532535e-49 | -8.615850e-47 |
| Msa0591540 | Msa1125550 | 0.802015 | 6.854404e-49 | -8.615850e-47 |
| Msa0591540 | Msa1130210 | -0.802918 | 4.465295e-49 | -8.615850e-47 |
| Msa0591540 | Msa1174850 | 0.804625 | 1.974401e-49 | -8.615850e-47 |
| Msa0591540 | Msa1175330 | 0.848075 | 7.720388e-60 | -8.615850e-47 |
| Msa0591540 | Msa1199560 | 0.815219 | 1.034198e-51 | -8.615850e-47 |
| Msa0591540 | Msa1217810 | 0.816778 | 4.641290e-52 | -8.615850e-47 |
| Msa0591540 | Msa1217830 | 0.816310 | 5.905637e-52 | -8.615850e-47 |
| Msa0591540 | Msa1228890 | 0.803080 | 4.134068e-49 | -8.615850e-47 |
| Msa0591540 | Msa1235630 | 0.849833 | 2.508994e-60 | -8.615850e-47 |
| Msa0591540 | Msa1267260 | 0.831623 | 1.503232e-55 | -8.615850e-47 |
| Msa0591540 | Msa1299360 | 0.842755 | 2.130141e-58 | -8.615850e-47 |
| Msa0591540 | Msa1300350 | -0.810963 | 8.877302e-51 | -8.615850e-47 |
| Msa0591540 | Msa1309130 | 0.802551 | 5.317859e-49 | -8.615850e-47 |
| Msa0591540 | Msa1315870 | 0.821584 | 3.735236e-53 | -8.615850e-47 |
| Msa0591540 | Msa1327760 | 0.813001 | 3.192908e-51 | -8.615850e-47 |
| Msa0591540 | Msa1328700 | 0.806166 | 9.387406e-50 | -8.615850e-47 |
| Msa0591540 | Msa1335940 | 0.809292 | 2.033825e-50 | -8.615850e-47 |
| Msa0591540 | Msa1340020 | 0.801901 | 7.234789e-49 | -8.615850e-47 |
| Msa0591540 | Msa1344850 | 0.807988 | 3.861493e-50 | -8.615850e-47 |
| Msa0591540 | Msa1362510 | 0.809294 | 2.031355e-50 | -8.615850e-47 |
| Msa0591540 | Msa1365150 | 0.801174 | 1.019795e-48 | -8.615850e-47 |
| Msa0591540 | Msa1367880 | 0.803898 | 2.797662e-49 | -8.615850e-47 |
| Msa0591540 | Msa1372580 | 0.810277 | 1.248439e-50 | -8.615850e-47 |
| Msa0591540 | Msa1382410 | 0.822546 | 2.236311e-53 | -8.615850e-47 |
| Msa0591540 | Msa1387190 | 0.804630 | 1.969739e-49 | -8.615850e-47 |
| Msa0591540 | Msa1393800 | 0.822270 | 2.591592e-53 | -8.615850e-47 |
| Msa0591540 | Msa1396940 | 0.818816 | 1.609311e-52 | -8.615850e-47 |
| Msa0591540 | Msa1397050 | 0.821414 | 4.090420e-53 | -8.615850e-47 |
| Msa0591540 | Msa1397940 | 0.830295 | 3.182892e-55 | -8.615850e-47 |
| Msa0591540 | Msa1404190 | 0.809002 | 2.346154e-50 | -8.615850e-47 |
| Msa0591540 | Msa1404730 | 0.812539 | 4.030277e-51 | -8.615850e-47 |
| Msa0591540 | Msa1412930 | -0.805007 | 1.643289e-49 | -8.615850e-47 |
| Msa0591540 | Msa1416390 | 0.815061 | 1.121289e-51 | -8.615850e-47 |
| Msa0591540 | Msa1423910 | 0.815783 | 7.743924e-52 | -8.615850e-47 |
| Msa0591540 | Msa1425340 | 0.808257 | 3.385277e-50 | -8.615850e-47 |
| Msa0591540 | Msa1435750 | 0.804708 | 1.897027e-49 | -8.615850e-47 |
| Msa0591540 | Msa1452470 | 0.843389 | 1.443869e-58 | -8.615850e-47 |
| Msa0591540 | Msa1465960 | 0.800079 | 1.705544e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591540 | MtrunA17_Chr4g0009581 | 96.429 | 84 | 3 | 0 | 1 | 84 | 1 | 84 | 2.36e-55 | 172 |
| Msa0591540 | MtrunA17_Chr4g0009531 | 73.418 | 79 | 21 | 0 | 6 | 84 | 5 | 83 | 4.64e-39 | 131 |
| Msa0591540 | MtrunA17_Chr8g0368921 | 69.048 | 84 | 24 | 1 | 3 | 84 | 2 | 85 | 4.92e-37 | 126 |
| Msa0591540 | MtrunA17_Chr8g0368931 | 71.951 | 82 | 23 | 0 | 3 | 84 | 2 | 83 | 1.38e-36 | 125 |
| Msa0591540 | MtrunA17_Chr7g0239701 | 65.909 | 88 | 27 | 1 | 1 | 85 | 1 | 88 | 5.43e-28 | 102 |
| Msa0591540 | MtrunA17_Chr4g0009611 | 82.979 | 47 | 8 | 0 | 1 | 47 | 1 | 47 | 2.42e-22 | 81.6 |
| Msa0591540 | MtrunA17_Chr4g0036051 | 51.351 | 74 | 36 | 0 | 11 | 84 | 5 | 78 | 5.03e-22 | 86.7 |
| Msa0591540 | MtrunA17_Chr4g0036251 | 45.333 | 75 | 37 | 2 | 11 | 84 | 11 | 82 | 3.30e-17 | 69.7 |
| Msa0591540 | MtrunA17_Chr4g0036291 | 40.506 | 79 | 41 | 3 | 11 | 84 | 11 | 88 | 1.27e-15 | 65.9 |
| Msa0591540 | MtrunA17_Chr7g0243551 | 41.026 | 78 | 45 | 1 | 7 | 84 | 13 | 89 | 3.86e-15 | 68.2 |
| Msa0591540 | MtrunA17_Chr4g0036311 | 39.241 | 79 | 42 | 3 | 11 | 84 | 11 | 88 | 5.93e-15 | 64.3 |
| Msa0591540 | MtrunA17_Chr6g0480021 | 40.449 | 89 | 47 | 3 | 1 | 84 | 1 | 88 | 1.26e-14 | 66.6 |
| Msa0591540 | MtrunA17_Chr4g0018921 | 42.857 | 77 | 40 | 2 | 11 | 84 | 8 | 83 | 6.93e-14 | 64.7 |
| Msa0591540 | MtrunA17_Chr6g0480011 | 42.308 | 78 | 41 | 2 | 11 | 84 | 11 | 88 | 1.74e-13 | 63.5 |
| Msa0591540 | MtrunA17_Chr5g0447941 | 43.243 | 74 | 34 | 2 | 16 | 84 | 19 | 89 | 6.38e-13 | 62.0 |
| Msa0591540 | MtrunA17_Chr5g0447951 | 43.243 | 74 | 34 | 2 | 16 | 84 | 19 | 89 | 6.64e-13 | 62.0 |
| Msa0591540 | MtrunA17_Chr5g0447961 | 43.243 | 74 | 34 | 2 | 16 | 84 | 19 | 89 | 6.64e-13 | 62.0 |
| Msa0591540 | MtrunA17_Chr6g0479981 | 35.227 | 88 | 53 | 2 | 1 | 84 | 1 | 88 | 4.49e-12 | 59.7 |
| Msa0591540 | MtrunA17_Chr3g0121001 | 41.667 | 72 | 39 | 2 | 16 | 84 | 20 | 91 | 2.02e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0591540 | AT2G37790.1 | 76.829 | 82 | 19 | 0 | 3 | 84 | 2 | 83 | 2.85e-40 | 134 |
| Msa0591540 | AT2G37770.1 | 72.152 | 79 | 22 | 0 | 6 | 84 | 5 | 83 | 1.22e-37 | 127 |
| Msa0591540 | AT2G37770.2 | 72.152 | 79 | 22 | 0 | 6 | 84 | 5 | 83 | 5.16e-37 | 126 |
| Msa0591540 | AT2G37760.5 | 65.823 | 79 | 23 | 1 | 6 | 84 | 5 | 79 | 2.50e-31 | 111 |
| Msa0591540 | AT2G37760.4 | 65.823 | 79 | 23 | 1 | 6 | 84 | 5 | 79 | 2.68e-31 | 110 |
| Msa0591540 | AT2G37760.3 | 65.823 | 79 | 23 | 1 | 6 | 84 | 5 | 79 | 2.68e-31 | 110 |
| Msa0591540 | AT2G37760.2 | 65.823 | 79 | 23 | 1 | 6 | 84 | 5 | 79 | 6.34e-31 | 110 |
| Msa0591540 | AT2G37760.1 | 65.823 | 79 | 23 | 1 | 6 | 84 | 5 | 79 | 6.34e-31 | 110 |
| Msa0591540 | AT3G53880.2 | 67.470 | 83 | 27 | 0 | 3 | 85 | 2 | 84 | 5.45e-30 | 108 |
| Msa0591540 | AT3G53880.1 | 67.470 | 83 | 27 | 0 | 3 | 85 | 2 | 84 | 6.57e-30 | 107 |
| Msa0591540 | AT2G21250.2 | 54.054 | 74 | 34 | 0 | 11 | 84 | 5 | 78 | 6.83e-23 | 88.2 |
| Msa0591540 | AT2G21250.1 | 54.054 | 74 | 34 | 0 | 11 | 84 | 5 | 78 | 1.55e-22 | 88.6 |
| Msa0591540 | AT2G21260.1 | 50.000 | 74 | 37 | 0 | 11 | 84 | 5 | 78 | 1.58e-21 | 85.9 |
| Msa0591540 | AT5G01670.2 | 40.244 | 82 | 48 | 1 | 4 | 85 | 11 | 91 | 3.54e-17 | 74.3 |
| Msa0591540 | AT5G01670.1 | 40.741 | 81 | 47 | 1 | 4 | 84 | 11 | 90 | 8.97e-17 | 73.2 |
| Msa0591540 | AT5G62420.1 | 39.474 | 76 | 44 | 1 | 11 | 84 | 8 | 83 | 4.10e-14 | 65.9 |
Find 15 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAGATTGTGCTCAAATTTA+TGG | 0.101564 | 4_2:-15968030 | Msa0591540:CDS |
| CTTTCTCTGTTCTCTGTCTA+TGG | 0.237474 | 4_2:-15968375 | Msa0591540:five_prime_UTR |
| CTTCTGTTGGTTTAGGCACT+TGG | 0.345093 | 4_2:-15968256 | Msa0591540:CDS |
| TTGAAGAAGTTGTTTGCTAA+TGG | 0.386855 | 4_2:-15966615 | Msa0591540:CDS |
| GGCACTTGGCTTGCTGCACC+TGG | 0.396659 | 4_2:-15968242 | Msa0591540:CDS |
| AAGATACCTTCTGTTGGTTT+AGG | 0.404234 | 4_2:-15968263 | Msa0591540:CDS |
| TCAAATTTATGGCAATGAAA+AGG | 0.513517 | 4_2:-15968019 | Msa0591540:CDS |
| GGAGCTAAGATACCTTCTGT+TGG | 0.572192 | 4_2:-15968269 | Msa0591540:CDS |
| TAGTTAAGCGTGAAGAGATG+TGG | 0.585474 | 4_2:-15966590 | Msa0591540:CDS |
| TGTGGATCACATCCAAGCTA+TGG | 0.585722 | 4_2:-15966572 | Msa0591540:CDS |
| GAAACAAACATTGACAGCAG+TGG | 0.593845 | 4_2:+15968199 | None:intergenic |
| AGATTCTTTGAGTTAAACAC+AGG | 0.596574 | 4_2:-15968290 | Msa0591540:CDS |
| CAAGTGCCTAAACCAACAGA+AGG | 0.640852 | 4_2:+15968257 | None:intergenic |
| AATTTATGGCAATGAAAAGG+AGG | 0.647312 | 4_2:-15968016 | Msa0591540:intron |
| ATTGCATCATAGATAACACC+AGG | 0.670388 | 4_2:+15968224 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTACTATTAATGGTTT+TGG | - | chr4_2:15966893-15966912 | Msa0591540:intron | 15.0% |
| !! | AATTATTATTATGTTAATGC+AGG | - | chr4_2:15966916-15966935 | Msa0591540:intron | 15.0% |
| !! | TTTCATCATTAAAATCTATT+GGG | + | chr4_2:15967593-15967612 | None:intergenic | 15.0% |
| !!! | TTTTCATCATTAAAATCTAT+TGG | + | chr4_2:15967594-15967613 | None:intergenic | 15.0% |
| !! | ATTAATTGTTTAAGAAACTT+AGG | - | chr4_2:15967804-15967823 | Msa0591540:intron | 15.0% |
| !! | TTATAAACTTATAGCTTATA+AGG | - | chr4_2:15967995-15968014 | Msa0591540:intron | 15.0% |
| !! | TATAAACTTATAGCTTATAA+GGG | - | chr4_2:15967996-15968015 | Msa0591540:intron | 15.0% |
| !!! | ATTATTACTATTAATGGTTT+TGG | - | chr4_2:15966893-15966912 | Msa0591540:intron | 15.0% |
| !! | AATTATTATTATGTTAATGC+AGG | - | chr4_2:15966916-15966935 | Msa0591540:intron | 15.0% |
| !! | TTTCATCATTAAAATCTATT+GGG | + | chr4_2:15967593-15967612 | None:intergenic | 15.0% |
| !!! | TTTTCATCATTAAAATCTAT+TGG | + | chr4_2:15967594-15967613 | None:intergenic | 15.0% |
| !! | ATTAATTGTTTAAGAAACTT+AGG | - | chr4_2:15967804-15967823 | Msa0591540:intron | 15.0% |
| !! | TTATAAACTTATAGCTTATA+AGG | - | chr4_2:15967995-15968014 | Msa0591540:intron | 15.0% |
| !! | TATAAACTTATAGCTTATAA+GGG | - | chr4_2:15967996-15968015 | Msa0591540:intron | 15.0% |
| !! | AATTATCTTCTACTTGAATT+TGG | + | chr4_2:15967201-15967220 | None:intergenic | 20.0% |
| !!! | TCTTTGATTTTGTTGAAATT+TGG | - | chr4_2:15967331-15967350 | Msa0591540:intron | 20.0% |
| !!! | CTTTGATTTTGTTGAAATTT+GGG | - | chr4_2:15967332-15967351 | Msa0591540:intron | 20.0% |
| !!! | TTTGATTTTGTTGAAATTTG+GGG | - | chr4_2:15967333-15967352 | Msa0591540:intron | 20.0% |
| !!! | ATTGAGAAGATATTTTTGTA+AGG | + | chr4_2:15967369-15967388 | None:intergenic | 20.0% |
| !!! | TTTTTAGTTGGAATTGAATT+CGG | - | chr4_2:15967659-15967678 | Msa0591540:intron | 20.0% |
| !! | AATAAGATTAGAACCTTAAT+AGG | - | chr4_2:15967886-15967905 | Msa0591540:intron | 20.0% |
| !! | TATAAGTTTATAAGTGGTTA+TGG | + | chr4_2:15967988-15968007 | None:intergenic | 20.0% |
| !! | ATAAGCTATAAGTTTATAAG+TGG | + | chr4_2:15967994-15968013 | None:intergenic | 20.0% |
| !! | TTTGTAAATGTTATGTAGAT+TGG | - | chr4_2:15968338-15968357 | Msa0591540:five_prime_UTR | 20.0% |
| !! | AATTATCTTCTACTTGAATT+TGG | + | chr4_2:15967201-15967220 | None:intergenic | 20.0% |
| !!! | TCTTTGATTTTGTTGAAATT+TGG | - | chr4_2:15967331-15967350 | Msa0591540:intron | 20.0% |
| !!! | CTTTGATTTTGTTGAAATTT+GGG | - | chr4_2:15967332-15967351 | Msa0591540:intron | 20.0% |
| !!! | TTTGATTTTGTTGAAATTTG+GGG | - | chr4_2:15967333-15967352 | Msa0591540:intron | 20.0% |
| !!! | ATTGAGAAGATATTTTTGTA+AGG | + | chr4_2:15967369-15967388 | None:intergenic | 20.0% |
| !!! | TTTTTAGTTGGAATTGAATT+CGG | - | chr4_2:15967659-15967678 | Msa0591540:intron | 20.0% |
| !! | AATAAGATTAGAACCTTAAT+AGG | - | chr4_2:15967886-15967905 | Msa0591540:intron | 20.0% |
| !! | TATAAGTTTATAAGTGGTTA+TGG | + | chr4_2:15967988-15968007 | None:intergenic | 20.0% |
| !! | ATAAGCTATAAGTTTATAAG+TGG | + | chr4_2:15967994-15968013 | None:intergenic | 20.0% |
| !! | TTTGTAAATGTTATGTAGAT+TGG | - | chr4_2:15968338-15968357 | Msa0591540:five_prime_UTR | 20.0% |
| ! | AACATGATGAAAGAAAAGAA+TGG | + | chr4_2:15966838-15966857 | None:intergenic | 25.0% |
| ! | ATTATTATGTTAATGCAGGT+TGG | - | chr4_2:15966920-15966939 | Msa0591540:intron | 25.0% |
| ! | ATAGATTGTGCTCAAATTTA+TGG | - | chr4_2:15966953-15966972 | Msa0591540:intron | 25.0% |
| ! | TCAAATTTATGGCAATGAAA+AGG | - | chr4_2:15966964-15966983 | Msa0591540:intron | 25.0% |
| ! | AACACATGTTATCATATCAT+AGG | + | chr4_2:15967058-15967077 | None:intergenic | 25.0% |
| !! | TTTTAGATTTACCAAGTGAT+TGG | - | chr4_2:15967100-15967119 | Msa0591540:intron | 25.0% |
| !!! | ACAAACTAAAAAAGCATTCT+TGG | + | chr4_2:15967304-15967323 | None:intergenic | 25.0% |
| !!! | TATTTTTGTAAGGATGAGTT+AGG | + | chr4_2:15967359-15967378 | None:intergenic | 25.0% |
| !!! | CTTATGAACTGATTTTTGTA+AGG | + | chr4_2:15967502-15967521 | None:intergenic | 25.0% |
| ! | CTTACAAAAATCAGTTCATA+AGG | - | chr4_2:15967500-15967519 | Msa0591540:intron | 25.0% |
| !!! | AAATTTAAAGCTTTTGCTGA+TGG | - | chr4_2:15967611-15967630 | Msa0591540:intron | 25.0% |
| !!! | AGTTATCTTACCTTTTTAGT+TGG | - | chr4_2:15967647-15967666 | Msa0591540:intron | 25.0% |
| ! | GAATTCAATTCCAACTAAAA+AGG | + | chr4_2:15967660-15967679 | None:intergenic | 25.0% |
| !!! | AGTGTAAGTGTTTTAAATTC+CGG | + | chr4_2:15967688-15967707 | None:intergenic | 25.0% |
| !! | TACATATGCAATTTGCTTTA+TGG | + | chr4_2:15967933-15967952 | None:intergenic | 25.0% |
| ! | AATGAATTGCAACTATAGTA+TGG | + | chr4_2:15968247-15968266 | None:intergenic | 25.0% |
| !! | TGTTGTGGTAATATTTCTAT+CGG | - | chr4_2:15968308-15968327 | Msa0591540:CDS | 25.0% |
| ! | AACATGATGAAAGAAAAGAA+TGG | + | chr4_2:15966838-15966857 | None:intergenic | 25.0% |
| ! | ATTATTATGTTAATGCAGGT+TGG | - | chr4_2:15966920-15966939 | Msa0591540:intron | 25.0% |
| ! | ATAGATTGTGCTCAAATTTA+TGG | - | chr4_2:15966953-15966972 | Msa0591540:intron | 25.0% |
| ! | TCAAATTTATGGCAATGAAA+AGG | - | chr4_2:15966964-15966983 | Msa0591540:intron | 25.0% |
| ! | AACACATGTTATCATATCAT+AGG | + | chr4_2:15967058-15967077 | None:intergenic | 25.0% |
| !! | TTTTAGATTTACCAAGTGAT+TGG | - | chr4_2:15967100-15967119 | Msa0591540:intron | 25.0% |
| !!! | ACAAACTAAAAAAGCATTCT+TGG | + | chr4_2:15967304-15967323 | None:intergenic | 25.0% |
| !!! | TATTTTTGTAAGGATGAGTT+AGG | + | chr4_2:15967359-15967378 | None:intergenic | 25.0% |
| !!! | CTTATGAACTGATTTTTGTA+AGG | + | chr4_2:15967502-15967521 | None:intergenic | 25.0% |
| ! | CTTACAAAAATCAGTTCATA+AGG | - | chr4_2:15967500-15967519 | Msa0591540:intron | 25.0% |
| !!! | AAATTTAAAGCTTTTGCTGA+TGG | - | chr4_2:15967611-15967630 | Msa0591540:intron | 25.0% |
| !!! | AGTTATCTTACCTTTTTAGT+TGG | - | chr4_2:15967647-15967666 | Msa0591540:intron | 25.0% |
| ! | GAATTCAATTCCAACTAAAA+AGG | + | chr4_2:15967660-15967679 | None:intergenic | 25.0% |
| !!! | AGTGTAAGTGTTTTAAATTC+CGG | + | chr4_2:15967688-15967707 | None:intergenic | 25.0% |
| !! | TACATATGCAATTTGCTTTA+TGG | + | chr4_2:15967933-15967952 | None:intergenic | 25.0% |
| ! | AATGAATTGCAACTATAGTA+TGG | + | chr4_2:15968247-15968266 | None:intergenic | 25.0% |
| !! | TGTTGTGGTAATATTTCTAT+CGG | - | chr4_2:15968308-15968327 | Msa0591540:CDS | 25.0% |
| AATCGTTACACCAGAAAAAT+GGG | - | chr4_2:15966657-15966676 | Msa0591540:intron | 30.0% | |
| ! | AGATTCTTTGAGTTAAACAC+AGG | - | chr4_2:15966693-15966712 | Msa0591540:intron | 30.0% |
| AATTTATGGCAATGAAAAGG+AGG | - | chr4_2:15966967-15966986 | Msa0591540:intron | 30.0% | |
| AATTAGTTGTTTGACTCAAG+TGG | - | chr4_2:15967217-15967236 | Msa0591540:intron | 30.0% | |
| TCTGATACCATGTTGAAATT+TGG | - | chr4_2:15967464-15967483 | Msa0591540:intron | 30.0% | |
| CTGATACCATGTTGAAATTT+GGG | - | chr4_2:15967465-15967484 | Msa0591540:intron | 30.0% | |
| TGATACCATGTTGAAATTTG+GGG | - | chr4_2:15967466-15967485 | Msa0591540:intron | 30.0% | |
| AAAAATCAGTTCATAAGGTG+AGG | - | chr4_2:15967505-15967524 | Msa0591540:intron | 30.0% | |
| CTCTTTGATAAGAGTTTAAG+AGG | + | chr4_2:15967538-15967557 | None:intergenic | 30.0% | |
| AATTTGAACCTCTTGTATAC+AGG | - | chr4_2:15967836-15967855 | Msa0591540:intron | 30.0% | |
| ! | AGGTTCTAATCTTATTCTCT+TGG | + | chr4_2:15967882-15967901 | None:intergenic | 30.0% |
| !!! | ATAGCTTATAAGGGCTTTTT+TGG | - | chr4_2:15968005-15968024 | Msa0591540:intron | 30.0% |
| ! | TGGATTAGATTCTGACTTAT+TGG | + | chr4_2:15968061-15968080 | None:intergenic | 30.0% |
| GAAAAGGGAAAAAAAGATGA+TGG | + | chr4_2:15968138-15968157 | None:intergenic | 30.0% | |
| !!! | TCATCTTTTTTTCCCTTTTC+TGG | - | chr4_2:15968138-15968157 | Msa0591540:intron | 30.0% |
| !!! | CATCTTTTTTTCCCTTTTCT+GGG | - | chr4_2:15968139-15968158 | Msa0591540:intron | 30.0% |
| !! | TTTTTGTTTGTACACTGTTG+TGG | - | chr4_2:15968293-15968312 | Msa0591540:CDS | 30.0% |
| ! | TTGAAGAAGTTGTTTGCTAA+TGG | - | chr4_2:15968368-15968387 | Msa0591540:five_prime_UTR | 30.0% |
| AATCGTTACACCAGAAAAAT+GGG | - | chr4_2:15966657-15966676 | Msa0591540:intron | 30.0% | |
| ! | AGATTCTTTGAGTTAAACAC+AGG | - | chr4_2:15966693-15966712 | Msa0591540:intron | 30.0% |
| AATTTATGGCAATGAAAAGG+AGG | - | chr4_2:15966967-15966986 | Msa0591540:intron | 30.0% | |
| AATTAGTTGTTTGACTCAAG+TGG | - | chr4_2:15967217-15967236 | Msa0591540:intron | 30.0% | |
| TCTGATACCATGTTGAAATT+TGG | - | chr4_2:15967464-15967483 | Msa0591540:intron | 30.0% | |
| CTGATACCATGTTGAAATTT+GGG | - | chr4_2:15967465-15967484 | Msa0591540:intron | 30.0% | |
| TGATACCATGTTGAAATTTG+GGG | - | chr4_2:15967466-15967485 | Msa0591540:intron | 30.0% | |
| AAAAATCAGTTCATAAGGTG+AGG | - | chr4_2:15967505-15967524 | Msa0591540:intron | 30.0% | |
| CTCTTTGATAAGAGTTTAAG+AGG | + | chr4_2:15967538-15967557 | None:intergenic | 30.0% | |
| AATTTGAACCTCTTGTATAC+AGG | - | chr4_2:15967836-15967855 | Msa0591540:intron | 30.0% | |
| ! | AGGTTCTAATCTTATTCTCT+TGG | + | chr4_2:15967882-15967901 | None:intergenic | 30.0% |
| !!! | ATAGCTTATAAGGGCTTTTT+TGG | - | chr4_2:15968005-15968024 | Msa0591540:intron | 30.0% |
| ! | TGGATTAGATTCTGACTTAT+TGG | + | chr4_2:15968061-15968080 | None:intergenic | 30.0% |
| GAAAAGGGAAAAAAAGATGA+TGG | + | chr4_2:15968138-15968157 | None:intergenic | 30.0% | |
| !!! | TCATCTTTTTTTCCCTTTTC+TGG | - | chr4_2:15968138-15968157 | Msa0591540:intron | 30.0% |
| !!! | CATCTTTTTTTCCCTTTTCT+GGG | - | chr4_2:15968139-15968158 | Msa0591540:intron | 30.0% |
| !! | TTTTTGTTTGTACACTGTTG+TGG | - | chr4_2:15968293-15968312 | Msa0591540:CDS | 30.0% |
| ! | TTGAAGAAGTTGTTTGCTAA+TGG | - | chr4_2:15968368-15968387 | Msa0591540:five_prime_UTR | 30.0% |
| CAATCGTTACACCAGAAAAA+TGG | - | chr4_2:15966656-15966675 | Msa0591540:intron | 35.0% | |
| !! | ATTCTCACTTCCCATTTTTC+TGG | + | chr4_2:15966670-15966689 | None:intergenic | 35.0% |
| !! | AAGATACCTTCTGTTGGTTT+AGG | - | chr4_2:15966720-15966739 | Msa0591540:intron | 35.0% |
| ATTGCATCATAGATAACACC+AGG | + | chr4_2:15966762-15966781 | None:intergenic | 35.0% | |
| ACGAACAATTCGTCATTTAG+TGG | + | chr4_2:15967146-15967165 | None:intergenic | 35.0% | |
| CTCAAGTGGTTAATGAGTAT+TGG | - | chr4_2:15967231-15967250 | Msa0591540:intron | 35.0% | |
| TTAGACCCCAAATTTCAACA+TGG | + | chr4_2:15967474-15967493 | None:intergenic | 35.0% | |
| ! | AGAGTCTTATCTATCCAATG+TGG | - | chr4_2:15967554-15967573 | Msa0591540:intron | 35.0% |
| ! | GAGTCTTATCTATCCAATGT+GGG | - | chr4_2:15967555-15967574 | Msa0591540:intron | 35.0% |
| GAAAAATCTAAGTCCCACAT+TGG | + | chr4_2:15967571-15967590 | None:intergenic | 35.0% | |
| ! | TTAAAGCTTTTGCTGATGGT+TGG | - | chr4_2:15967615-15967634 | Msa0591540:intron | 35.0% |
| TTGGAATTGAATTCGGAAAC+CGG | - | chr4_2:15967666-15967685 | Msa0591540:intron | 35.0% | |
| AGTAAGATAGCTAACAACCA+TGG | + | chr4_2:15967734-15967753 | None:intergenic | 35.0% | |
| GATTAGAACCTTAATAGGCT+TGG | - | chr4_2:15967891-15967910 | Msa0591540:intron | 35.0% | |
| ! | TGCAATTTGCTTTATGGTCT+TGG | + | chr4_2:15967927-15967946 | None:intergenic | 35.0% |
| AGTCAGAATCTAATCCAAAC+CGG | - | chr4_2:15968064-15968083 | Msa0591540:intron | 35.0% | |
| TTGGTAGATGAATTAAACCC+CGG | + | chr4_2:15968086-15968105 | None:intergenic | 35.0% | |
| CTACTCTCTTGAATGAACTT+TGG | + | chr4_2:15968105-15968124 | None:intergenic | 35.0% | |
| AGTCAAATAGACCCAGAAAA+GGG | + | chr4_2:15968153-15968172 | None:intergenic | 35.0% | |
| CAATCGTTACACCAGAAAAA+TGG | - | chr4_2:15966656-15966675 | Msa0591540:intron | 35.0% | |
| !! | ATTCTCACTTCCCATTTTTC+TGG | + | chr4_2:15966670-15966689 | None:intergenic | 35.0% |
| !! | AAGATACCTTCTGTTGGTTT+AGG | - | chr4_2:15966720-15966739 | Msa0591540:intron | 35.0% |
| ATTGCATCATAGATAACACC+AGG | + | chr4_2:15966762-15966781 | None:intergenic | 35.0% | |
| ACGAACAATTCGTCATTTAG+TGG | + | chr4_2:15967146-15967165 | None:intergenic | 35.0% | |
| CTCAAGTGGTTAATGAGTAT+TGG | - | chr4_2:15967231-15967250 | Msa0591540:intron | 35.0% | |
| TTAGACCCCAAATTTCAACA+TGG | + | chr4_2:15967474-15967493 | None:intergenic | 35.0% | |
| ! | AGAGTCTTATCTATCCAATG+TGG | - | chr4_2:15967554-15967573 | Msa0591540:intron | 35.0% |
| ! | GAGTCTTATCTATCCAATGT+GGG | - | chr4_2:15967555-15967574 | Msa0591540:intron | 35.0% |
| GAAAAATCTAAGTCCCACAT+TGG | + | chr4_2:15967571-15967590 | None:intergenic | 35.0% | |
| ! | TTAAAGCTTTTGCTGATGGT+TGG | - | chr4_2:15967615-15967634 | Msa0591540:intron | 35.0% |
| TTGGAATTGAATTCGGAAAC+CGG | - | chr4_2:15967666-15967685 | Msa0591540:intron | 35.0% | |
| AGTAAGATAGCTAACAACCA+TGG | + | chr4_2:15967734-15967753 | None:intergenic | 35.0% | |
| GATTAGAACCTTAATAGGCT+TGG | - | chr4_2:15967891-15967910 | Msa0591540:intron | 35.0% | |
| ! | TGCAATTTGCTTTATGGTCT+TGG | + | chr4_2:15967927-15967946 | None:intergenic | 35.0% |
| AGTCAGAATCTAATCCAAAC+CGG | - | chr4_2:15968064-15968083 | Msa0591540:intron | 35.0% | |
| TTGGTAGATGAATTAAACCC+CGG | + | chr4_2:15968086-15968105 | None:intergenic | 35.0% | |
| CTACTCTCTTGAATGAACTT+TGG | + | chr4_2:15968105-15968124 | None:intergenic | 35.0% | |
| AGTCAAATAGACCCAGAAAA+GGG | + | chr4_2:15968153-15968172 | None:intergenic | 35.0% | |
| CTTTCTCTGTTCTCTGTCTA+TGG | - | chr4_2:15966608-15966627 | Msa0591540:CDS | 40.0% | |
| GAAACAAACATTGACAGCAG+TGG | + | chr4_2:15966787-15966806 | None:intergenic | 40.0% | |
| TTTACCAAGTGATTGGACTC+AGG | - | chr4_2:15967107-15967126 | Msa0591540:intron | 40.0% | |
| TTCTTGGTCCTGTATACAAG+AGG | + | chr4_2:15967847-15967866 | None:intergenic | 40.0% | |
| TCTTGTATACAGGACCAAGA+AGG | - | chr4_2:15967846-15967865 | Msa0591540:intron | 40.0% | |
| !!! | GCTTATAAGGGCTTTTTTGG+CGG | - | chr4_2:15968008-15968027 | Msa0591540:intron | 40.0% |
| GTCAGAATCTAATCCAAACC+GGG | - | chr4_2:15968065-15968084 | Msa0591540:intron | 40.0% | |
| TCAGAATCTAATCCAAACCG+GGG | - | chr4_2:15968066-15968085 | Msa0591540:intron | 40.0% | |
| AGATGAATTAAACCCCGGTT+TGG | + | chr4_2:15968081-15968100 | None:intergenic | 40.0% | |
| GAGTCAAATAGACCCAGAAA+AGG | + | chr4_2:15968154-15968173 | None:intergenic | 40.0% | |
| TTTCCTTCTGAGCAAGCATT+CGG | - | chr4_2:15968187-15968206 | Msa0591540:intron | 40.0% | |
| TAGTTAAGCGTGAAGAGATG+TGG | - | chr4_2:15968393-15968412 | Msa0591540:five_prime_UTR | 40.0% | |
| CTTTCTCTGTTCTCTGTCTA+TGG | - | chr4_2:15966608-15966627 | Msa0591540:CDS | 40.0% | |
| GAAACAAACATTGACAGCAG+TGG | + | chr4_2:15966787-15966806 | None:intergenic | 40.0% | |
| TTTACCAAGTGATTGGACTC+AGG | - | chr4_2:15967107-15967126 | Msa0591540:intron | 40.0% | |
| TTCTTGGTCCTGTATACAAG+AGG | + | chr4_2:15967847-15967866 | None:intergenic | 40.0% | |
| TCTTGTATACAGGACCAAGA+AGG | - | chr4_2:15967846-15967865 | Msa0591540:intron | 40.0% | |
| !!! | GCTTATAAGGGCTTTTTTGG+CGG | - | chr4_2:15968008-15968027 | Msa0591540:intron | 40.0% |
| GTCAGAATCTAATCCAAACC+GGG | - | chr4_2:15968065-15968084 | Msa0591540:intron | 40.0% | |
| TCAGAATCTAATCCAAACCG+GGG | - | chr4_2:15968066-15968085 | Msa0591540:intron | 40.0% | |
| AGATGAATTAAACCCCGGTT+TGG | + | chr4_2:15968081-15968100 | None:intergenic | 40.0% | |
| GAGTCAAATAGACCCAGAAA+AGG | + | chr4_2:15968154-15968173 | None:intergenic | 40.0% | |
| TTTCCTTCTGAGCAAGCATT+CGG | - | chr4_2:15968187-15968206 | Msa0591540:intron | 40.0% | |
| TAGTTAAGCGTGAAGAGATG+TGG | - | chr4_2:15968393-15968412 | Msa0591540:five_prime_UTR | 40.0% | |
| GGAGCTAAGATACCTTCTGT+TGG | - | chr4_2:15966714-15966733 | Msa0591540:intron | 45.0% | |
| CAAGTGCCTAAACCAACAGA+AGG | + | chr4_2:15966729-15966748 | None:intergenic | 45.0% | |
| !! | CTTCTGTTGGTTTAGGCACT+TGG | - | chr4_2:15966727-15966746 | Msa0591540:intron | 45.0% |
| TTGTCTAGCACAAGATGCAG+GGG | + | chr4_2:15967275-15967294 | None:intergenic | 45.0% | |
| CTTGTCTAGCACAAGATGCA+GGG | + | chr4_2:15967276-15967295 | None:intergenic | 45.0% | |
| TCTTGTCTAGCACAAGATGC+AGG | + | chr4_2:15967277-15967296 | None:intergenic | 45.0% | |
| CAACTACTTACGCTAGACCA+TGG | - | chr4_2:15967714-15967733 | Msa0591540:intron | 45.0% | |
| ! | ACAGGACCAAGAAGGTATGA+AGG | - | chr4_2:15967854-15967873 | Msa0591540:intron | 45.0% |
| TTGGCACCTTCATACCTTCT+TGG | + | chr4_2:15967863-15967882 | None:intergenic | 45.0% | |
| CCAGTCAACCAAGCCTATTA+AGG | + | chr4_2:15967902-15967921 | None:intergenic | 45.0% | |
| ! | CCTTAATAGGCTTGGTTGAC+TGG | - | chr4_2:15967899-15967918 | Msa0591540:intron | 45.0% |
| !!! | AAGGGCTTTTTTGGCGGTTA+AGG | - | chr4_2:15968014-15968033 | Msa0591540:intron | 45.0% |
| TGTGGATCACATCCAAGCTA+TGG | - | chr4_2:15968411-15968430 | Msa0591540:five_prime_UTR | 45.0% | |
| GGAGCTAAGATACCTTCTGT+TGG | - | chr4_2:15966714-15966733 | Msa0591540:intron | 45.0% | |
| CAAGTGCCTAAACCAACAGA+AGG | + | chr4_2:15966729-15966748 | None:intergenic | 45.0% | |
| !! | CTTCTGTTGGTTTAGGCACT+TGG | - | chr4_2:15966727-15966746 | Msa0591540:intron | 45.0% |
| TTGTCTAGCACAAGATGCAG+GGG | + | chr4_2:15967275-15967294 | None:intergenic | 45.0% | |
| CTTGTCTAGCACAAGATGCA+GGG | + | chr4_2:15967276-15967295 | None:intergenic | 45.0% | |
| TCTTGTCTAGCACAAGATGC+AGG | + | chr4_2:15967277-15967296 | None:intergenic | 45.0% | |
| CAACTACTTACGCTAGACCA+TGG | - | chr4_2:15967714-15967733 | Msa0591540:intron | 45.0% | |
| ! | ACAGGACCAAGAAGGTATGA+AGG | - | chr4_2:15967854-15967873 | Msa0591540:intron | 45.0% |
| TTGGCACCTTCATACCTTCT+TGG | + | chr4_2:15967863-15967882 | None:intergenic | 45.0% | |
| CCAGTCAACCAAGCCTATTA+AGG | + | chr4_2:15967902-15967921 | None:intergenic | 45.0% | |
| ! | CCTTAATAGGCTTGGTTGAC+TGG | - | chr4_2:15967899-15967918 | Msa0591540:intron | 45.0% |
| !!! | AAGGGCTTTTTTGGCGGTTA+AGG | - | chr4_2:15968014-15968033 | Msa0591540:intron | 45.0% |
| TGTGGATCACATCCAAGCTA+TGG | - | chr4_2:15968411-15968430 | Msa0591540:five_prime_UTR | 45.0% | |
| !! | TTTATTATTATTACTATTAA+TGG | - | chr4_2:15966887-15966906 | Msa0591540:intron | 5.0% |
| !! | TTTATTATTATTACTATTAA+TGG | - | chr4_2:15966887-15966906 | Msa0591540:intron | 5.0% |
| ACCAAGTGATTGGACTCAGG+TGG | - | chr4_2:15967110-15967129 | Msa0591540:intron | 50.0% | |
| ACCACCTGAGTCCAATCACT+TGG | + | chr4_2:15967114-15967133 | None:intergenic | 50.0% | |
| ! | ACCAAGCCCAACAAGAGTGT+CGG | + | chr4_2:15967408-15967427 | None:intergenic | 50.0% |
| CTACCGAATGCTTGCTCAGA+AGG | + | chr4_2:15968193-15968212 | None:intergenic | 50.0% | |
| ACCAAGTGATTGGACTCAGG+TGG | - | chr4_2:15967110-15967129 | Msa0591540:intron | 50.0% | |
| ACCACCTGAGTCCAATCACT+TGG | + | chr4_2:15967114-15967133 | None:intergenic | 50.0% | |
| ! | ACCAAGCCCAACAAGAGTGT+CGG | + | chr4_2:15967408-15967427 | None:intergenic | 50.0% |
| CTACCGAATGCTTGCTCAGA+AGG | + | chr4_2:15968193-15968212 | None:intergenic | 50.0% | |
| !! | AACAAGAGTGTCGGGCGTGA+GGG | + | chr4_2:15967399-15967418 | None:intergenic | 55.0% |
| TCACGCCCGACACTCTTGTT+GGG | - | chr4_2:15967399-15967418 | Msa0591540:intron | 55.0% | |
| !! | CCAAGCCCAACAAGAGTGTC+GGG | + | chr4_2:15967407-15967426 | None:intergenic | 55.0% |
| TTGGTGCGTGGACATGTAGG+TGG | - | chr4_2:15967423-15967442 | Msa0591540:intron | 55.0% | |
| !! | AACAAGAGTGTCGGGCGTGA+GGG | + | chr4_2:15967399-15967418 | None:intergenic | 55.0% |
| TCACGCCCGACACTCTTGTT+GGG | - | chr4_2:15967399-15967418 | Msa0591540:intron | 55.0% | |
| !! | CCAAGCCCAACAAGAGTGTC+GGG | + | chr4_2:15967407-15967426 | None:intergenic | 55.0% |
| TTGGTGCGTGGACATGTAGG+TGG | - | chr4_2:15967423-15967442 | Msa0591540:intron | 55.0% | |
| !! | ACAAGAGTGTCGGGCGTGAG+GGG | + | chr4_2:15967398-15967417 | None:intergenic | 60.0% |
| !! | CAACAAGAGTGTCGGGCGTG+AGG | + | chr4_2:15967400-15967419 | None:intergenic | 60.0% |
| CTCACGCCCGACACTCTTGT+TGG | - | chr4_2:15967398-15967417 | Msa0591540:intron | 60.0% | |
| CCCGACACTCTTGTTGGGCT+TGG | - | chr4_2:15967404-15967423 | Msa0591540:intron | 60.0% | |
| !! | CTCTTGTTGGGCTTGGTGCG+TGG | - | chr4_2:15967411-15967430 | Msa0591540:intron | 60.0% |
| !! | GGCTTGGTGCGTGGACATGT+AGG | - | chr4_2:15967420-15967439 | Msa0591540:intron | 60.0% |
| !! | ACAAGAGTGTCGGGCGTGAG+GGG | + | chr4_2:15967398-15967417 | None:intergenic | 60.0% |
| !! | CAACAAGAGTGTCGGGCGTG+AGG | + | chr4_2:15967400-15967419 | None:intergenic | 60.0% |
| CTCACGCCCGACACTCTTGT+TGG | - | chr4_2:15967398-15967417 | Msa0591540:intron | 60.0% | |
| CCCGACACTCTTGTTGGGCT+TGG | - | chr4_2:15967404-15967423 | Msa0591540:intron | 60.0% | |
| !! | CTCTTGTTGGGCTTGGTGCG+TGG | - | chr4_2:15967411-15967430 | Msa0591540:intron | 60.0% |
| !! | GGCTTGGTGCGTGGACATGT+AGG | - | chr4_2:15967420-15967439 | Msa0591540:intron | 60.0% |
| !! | GGCACTTGGCTTGCTGCACC+TGG | - | chr4_2:15966741-15966760 | Msa0591540:intron | 65.0% |
| !! | AAGAGTGTCGGGCGTGAGGG+GGG | + | chr4_2:15967396-15967415 | None:intergenic | 65.0% |
| !! | CAAGAGTGTCGGGCGTGAGG+GGG | + | chr4_2:15967397-15967416 | None:intergenic | 65.0% |
| !! | GGCACTTGGCTTGCTGCACC+TGG | - | chr4_2:15966741-15966760 | Msa0591540:intron | 65.0% |
| !! | AAGAGTGTCGGGCGTGAGGG+GGG | + | chr4_2:15967396-15967415 | None:intergenic | 65.0% |
| !! | CAAGAGTGTCGGGCGTGAGG+GGG | + | chr4_2:15967397-15967416 | None:intergenic | 65.0% |
| !! | AGAGTGTCGGGCGTGAGGGG+GGG | + | chr4_2:15967395-15967414 | None:intergenic | 70.0% |
| !! | AGAGTGTCGGGCGTGAGGGG+GGG | + | chr4_2:15967395-15967414 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 15966569 | 15968436 | 15966569 | ID=Msa0591540;Name=Msa0591540 |
| chr4_2 | mRNA | 15966569 | 15968436 | 15966569 | ID=Msa0591540-mRNA-1;Parent=Msa0591540;Name=Msa0591540-mRNA-1;_AED=0.00;_eAED=0.00;_QI=106|1|1|1|1|1|3|0|85 |
| chr4_2 | exon | 15966569 | 15966649 | 15966569 | ID=Msa0591540-mRNA-1:exon:4606;Parent=Msa0591540-mRNA-1 |
| chr4_2 | exon | 15968017 | 15968067 | 15968017 | ID=Msa0591540-mRNA-1:exon:4605;Parent=Msa0591540-mRNA-1 |
| chr4_2 | exon | 15968208 | 15968436 | 15968208 | ID=Msa0591540-mRNA-1:exon:4604;Parent=Msa0591540-mRNA-1 |
| chr4_2 | five_prime_UTR | 15968331 | 15968436 | 15968331 | ID=Msa0591540-mRNA-1:five_prime_utr;Parent=Msa0591540-mRNA-1 |
| chr4_2 | CDS | 15968208 | 15968330 | 15968208 | ID=Msa0591540-mRNA-1:cds;Parent=Msa0591540-mRNA-1 |
| chr4_2 | CDS | 15968017 | 15968067 | 15968017 | ID=Msa0591540-mRNA-1:cds;Parent=Msa0591540-mRNA-1 |
| chr4_2 | CDS | 15966569 | 15966649 | 15966569 | ID=Msa0591540-mRNA-1:cds;Parent=Msa0591540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
