Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713970 | XP_003611607.1 | 98.730 | 630 | 8 | 0 | 1 | 630 | 1 | 630 | 0.0 | 1287 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713970 | sp|O80970|NPY2_ARATH | 59.167 | 600 | 215 | 9 | 1 | 589 | 1 | 581 | 0.0 | 690 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713970 | G7K3U5 | 98.730 | 630 | 8 | 0 | 1 | 630 | 1 | 630 | 0.0 | 1287 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007970 | Msa0713970 | 0.806883 | 6.625601e-50 | -8.615850e-47 |
| Msa0081520 | Msa0713970 | 0.813215 | 2.865645e-51 | -8.615850e-47 |
| Msa0093850 | Msa0713970 | 0.827210 | 1.774126e-54 | -8.615850e-47 |
| Msa0614000 | Msa0713970 | 0.802056 | 6.722959e-49 | -8.615850e-47 |
| Msa0638480 | Msa0713970 | 0.815324 | 9.802143e-52 | -8.615850e-47 |
| Msa0651550 | Msa0713970 | 0.813456 | 2.535957e-51 | -8.615850e-47 |
| Msa0652770 | Msa0713970 | 0.822218 | 2.665024e-53 | -8.615850e-47 |
| Msa0693330 | Msa0713970 | 0.804335 | 2.269247e-49 | -8.615850e-47 |
| Msa0695270 | Msa0713970 | 0.822619 | 2.149889e-53 | -8.615850e-47 |
| Msa0706760 | Msa0713970 | 0.813331 | 2.702054e-51 | -8.615850e-47 |
| Msa0713970 | Msa0715060 | 0.814028 | 1.897377e-51 | -8.615850e-47 |
| Msa0713970 | Msa0756210 | 0.915013 | 9.738202e-85 | -8.615850e-47 |
| Msa0713970 | Msa0829330 | 0.809317 | 2.008761e-50 | -8.615850e-47 |
| Msa0713970 | Msa0835370 | 0.960342 | 1.892544e-118 | -8.615850e-47 |
| Msa0713970 | Msa0861510 | 0.805443 | 1.331745e-49 | -8.615850e-47 |
| Msa0713970 | Msa0861600 | 0.800751 | 1.244021e-48 | -8.615850e-47 |
| Msa0713970 | Msa0929090 | 0.804323 | 2.282468e-49 | -8.615850e-47 |
| Msa0713970 | Msa0945190 | 0.831747 | 1.401129e-55 | -8.615850e-47 |
| Msa0713970 | Msa0992030 | 0.807984 | 3.868937e-50 | -8.615850e-47 |
| Msa0713970 | Msa0993760 | 0.815726 | 7.974064e-52 | -8.615850e-47 |
| Msa0713970 | Msa1127590 | 0.810993 | 8.742020e-51 | -8.615850e-47 |
| Msa0713970 | Msa1160920 | 0.808745 | 2.662924e-50 | -8.615850e-47 |
| Msa0713970 | Msa1356830 | 0.806088 | 9.746315e-50 | -8.615850e-47 |
| Msa0713970 | Msa1369150 | 0.800564 | 1.358638e-48 | -8.615850e-47 |
| Msa0713970 | Msa1371520 | 0.824069 | 9.855389e-54 | -8.615850e-47 |
| Msa0713970 | Msa1412000 | 0.834101 | 3.642102e-56 | -8.615850e-47 |
| Msa0713970 | Msa1434740 | 0.804421 | 2.177646e-49 | -8.615850e-47 |
| Msa0138360 | Msa0713970 | 0.829272 | 5.648849e-55 | -8.615850e-47 |
| Msa0147980 | Msa0713970 | 0.817826 | 2.696137e-52 | -8.615850e-47 |
| Msa0173890 | Msa0713970 | 0.816824 | 4.531652e-52 | -8.615850e-47 |
| Msa0196190 | Msa0713970 | 0.828067 | 1.104803e-54 | -8.615850e-47 |
| Msa0378720 | Msa0713970 | 0.804588 | 2.009981e-49 | -8.615850e-47 |
| Msa0307270 | Msa0713970 | 0.812701 | 3.714584e-51 | -8.615850e-47 |
| Msa0315980 | Msa0713970 | 0.842571 | 2.384534e-58 | -8.615850e-47 |
| Msa0341690 | Msa0713970 | 0.831908 | 1.278484e-55 | -8.615850e-47 |
| Msa0521290 | Msa0713970 | 0.801819 | 7.519790e-49 | -8.615850e-47 |
| Msa0527190 | Msa0713970 | 0.828142 | 1.059563e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713970 | MtrunA17_Chr5g0401341 | 98.730 | 630 | 8 | 0 | 1 | 630 | 1 | 630 | 0.0 | 1287 |
| Msa0713970 | MtrunA17_Chr1g0207461 | 62.323 | 637 | 221 | 9 | 1 | 630 | 1 | 625 | 0.0 | 766 |
| Msa0713970 | MtrunA17_Chr1g0150191 | 50.233 | 645 | 278 | 13 | 1 | 630 | 1 | 617 | 0.0 | 573 |
| Msa0713970 | MtrunA17_Chr8g0367891 | 43.402 | 629 | 279 | 17 | 1 | 593 | 1 | 588 | 7.45e-146 | 436 |
| Msa0713970 | MtrunA17_Chr5g0412591 | 40.930 | 645 | 294 | 14 | 1 | 599 | 1 | 604 | 2.26e-138 | 417 |
| Msa0713970 | MtrunA17_Chr4g0076521 | 42.857 | 504 | 252 | 8 | 1 | 490 | 1 | 482 | 4.58e-135 | 408 |
| Msa0713970 | MtrunA17_Chr4g0050021 | 38.908 | 586 | 304 | 12 | 5 | 545 | 23 | 599 | 1.40e-134 | 409 |
| Msa0713970 | MtrunA17_Chr2g0279481 | 38.851 | 592 | 302 | 11 | 5 | 545 | 23 | 605 | 1.45e-130 | 399 |
| Msa0713970 | MtrunA17_Chr2g0303541 | 42.351 | 536 | 272 | 11 | 1 | 508 | 1 | 527 | 3.40e-128 | 392 |
| Msa0713970 | MtrunA17_Chr2g0290741 | 39.521 | 501 | 263 | 8 | 1 | 490 | 1 | 472 | 1.51e-117 | 362 |
| Msa0713970 | MtrunA17_Chr2g0285511 | 38.198 | 555 | 309 | 13 | 1 | 535 | 1 | 541 | 5.41e-109 | 340 |
| Msa0713970 | MtrunA17_Chr8g0382231 | 33.045 | 578 | 281 | 14 | 11 | 545 | 38 | 552 | 3.08e-103 | 326 |
| Msa0713970 | MtrunA17_Chr1g0181181 | 38.224 | 518 | 260 | 11 | 1 | 490 | 1 | 486 | 1.11e-102 | 323 |
| Msa0713970 | MtrunA17_Chr2g0320691 | 38.247 | 502 | 276 | 9 | 27 | 500 | 23 | 518 | 1.13e-102 | 325 |
| Msa0713970 | MtrunA17_Chr4g0010091 | 38.493 | 491 | 274 | 10 | 19 | 492 | 21 | 500 | 5.57e-102 | 323 |
| Msa0713970 | MtrunA17_Chr5g0401451 | 34.295 | 624 | 363 | 15 | 24 | 630 | 37 | 630 | 2.39e-101 | 322 |
| Msa0713970 | MtrunA17_Chr4g0053841 | 36.756 | 487 | 286 | 7 | 24 | 501 | 10 | 483 | 2.13e-99 | 315 |
| Msa0713970 | MtrunA17_Chr8g0374011 | 36.523 | 512 | 263 | 11 | 22 | 483 | 15 | 514 | 2.93e-94 | 304 |
| Msa0713970 | MtrunA17_Chr1g0199631 | 39.440 | 464 | 251 | 13 | 45 | 487 | 8 | 462 | 1.31e-93 | 300 |
| Msa0713970 | MtrunA17_Chr1g0195911 | 35.918 | 490 | 272 | 9 | 25 | 492 | 34 | 503 | 7.06e-93 | 299 |
| Msa0713970 | MtrunA17_Chr7g0245201 | 36.100 | 518 | 286 | 14 | 23 | 515 | 57 | 554 | 1.25e-89 | 291 |
| Msa0713970 | MtrunA17_Chr7g0268781 | 34.442 | 511 | 289 | 11 | 25 | 510 | 34 | 523 | 1.76e-84 | 277 |
| Msa0713970 | MtrunA17_Chr3g0108331 | 34.511 | 481 | 265 | 9 | 26 | 491 | 23 | 468 | 7.46e-84 | 274 |
| Msa0713970 | MtrunA17_Chr1g0191711 | 30.943 | 488 | 280 | 8 | 28 | 503 | 59 | 501 | 3.65e-74 | 248 |
| Msa0713970 | MtrunA17_Chr5g0432861 | 31.174 | 494 | 281 | 9 | 26 | 497 | 24 | 480 | 9.18e-72 | 242 |
| Msa0713970 | MtrunA17_Chr2g0332281 | 39.649 | 285 | 144 | 4 | 212 | 483 | 24 | 293 | 2.42e-55 | 194 |
| Msa0713970 | MtrunA17_Chr4g0003891 | 39.576 | 283 | 145 | 5 | 212 | 483 | 46 | 313 | 1.51e-53 | 189 |
| Msa0713970 | MtrunA17_Chr1g0163311 | 27.083 | 480 | 294 | 12 | 30 | 481 | 6 | 457 | 1.70e-44 | 166 |
| Msa0713970 | MtrunA17_Chr4g0023801 | 26.580 | 459 | 292 | 11 | 36 | 481 | 14 | 440 | 4.06e-37 | 145 |
| Msa0713970 | MtrunA17_Chr4g0037661 | 24.390 | 492 | 317 | 9 | 28 | 488 | 4 | 471 | 7.79e-35 | 139 |
| Msa0713970 | MtrunA17_Chr2g0280541 | 26.509 | 381 | 250 | 9 | 94 | 469 | 3 | 358 | 4.60e-28 | 117 |
| Msa0713970 | MtrunA17_Chr1g0206621 | 36.000 | 150 | 92 | 2 | 31 | 177 | 72 | 220 | 8.79e-23 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713970 | AT2G14820.2 | 59.167 | 600 | 215 | 9 | 1 | 589 | 1 | 581 | 0.0 | 690 |
| Msa0713970 | AT2G14820.1 | 59.167 | 600 | 215 | 9 | 1 | 589 | 1 | 581 | 0.0 | 690 |
| Msa0713970 | AT4G37590.1 | 55.412 | 619 | 192 | 17 | 1 | 600 | 1 | 554 | 0.0 | 635 |
| Msa0713970 | AT5G67440.3 | 56.340 | 623 | 197 | 15 | 1 | 611 | 1 | 560 | 0.0 | 632 |
| Msa0713970 | AT5G67440.1 | 56.340 | 623 | 197 | 15 | 1 | 611 | 1 | 560 | 0.0 | 632 |
| Msa0713970 | AT5G67440.2 | 54.017 | 585 | 188 | 16 | 42 | 611 | 5 | 523 | 0.0 | 558 |
| Msa0713970 | AT2G23050.1 | 57.661 | 496 | 163 | 8 | 1 | 489 | 1 | 456 | 0.0 | 544 |
| Msa0713970 | AT4G31820.1 | 46.865 | 606 | 253 | 13 | 1 | 602 | 1 | 541 | 7.54e-176 | 511 |
| Msa0713970 | AT1G67900.5 | 43.857 | 643 | 288 | 15 | 1 | 592 | 1 | 621 | 7.43e-159 | 470 |
| Msa0713970 | AT1G67900.1 | 43.857 | 643 | 288 | 15 | 1 | 592 | 1 | 621 | 7.43e-159 | 470 |
| Msa0713970 | AT1G67900.3 | 43.857 | 643 | 288 | 15 | 1 | 592 | 1 | 621 | 7.43e-159 | 470 |
| Msa0713970 | AT1G67900.6 | 43.857 | 643 | 288 | 15 | 1 | 592 | 1 | 621 | 7.43e-159 | 470 |
| Msa0713970 | AT1G67900.2 | 43.857 | 643 | 288 | 15 | 1 | 592 | 1 | 621 | 7.43e-159 | 470 |
| Msa0713970 | AT1G67900.4 | 43.857 | 643 | 288 | 15 | 1 | 592 | 1 | 621 | 7.43e-159 | 470 |
| Msa0713970 | AT4G31820.2 | 45.487 | 554 | 231 | 14 | 54 | 602 | 1 | 488 | 5.63e-147 | 436 |
| Msa0713970 | AT2G23050.2 | 55.000 | 380 | 130 | 7 | 111 | 489 | 1 | 340 | 3.40e-131 | 390 |
| Msa0713970 | AT3G26490.1 | 42.533 | 529 | 260 | 12 | 1 | 495 | 1 | 519 | 2.02e-127 | 388 |
| Msa0713970 | AT3G26490.3 | 42.533 | 529 | 260 | 12 | 1 | 495 | 1 | 519 | 2.02e-127 | 388 |
| Msa0713970 | AT3G26490.4 | 42.533 | 529 | 260 | 12 | 1 | 495 | 1 | 519 | 2.02e-127 | 388 |
| Msa0713970 | AT5G47800.3 | 39.882 | 509 | 269 | 9 | 1 | 494 | 1 | 487 | 8.55e-124 | 378 |
| Msa0713970 | AT5G47800.1 | 39.882 | 509 | 269 | 9 | 1 | 494 | 1 | 487 | 8.55e-124 | 378 |
| Msa0713970 | AT5G47800.4 | 39.882 | 509 | 269 | 9 | 1 | 494 | 1 | 487 | 8.55e-124 | 378 |
| Msa0713970 | AT5G03250.1 | 41.111 | 540 | 279 | 14 | 1 | 514 | 1 | 527 | 5.41e-122 | 374 |
| Msa0713970 | AT5G47800.2 | 39.686 | 509 | 270 | 8 | 1 | 494 | 114 | 600 | 8.43e-122 | 376 |
| Msa0713970 | AT1G30440.1 | 39.114 | 542 | 289 | 10 | 1 | 509 | 1 | 534 | 1.19e-119 | 370 |
| Msa0713970 | AT5G13600.1 | 40.237 | 507 | 273 | 10 | 1 | 487 | 1 | 497 | 3.51e-110 | 343 |
| Msa0713970 | AT3G26490.2 | 40.987 | 466 | 231 | 12 | 1 | 432 | 1 | 456 | 4.72e-100 | 314 |
| Msa0713970 | AT3G44820.1 | 36.414 | 541 | 300 | 11 | 8 | 512 | 5 | 537 | 9.27e-100 | 318 |
| Msa0713970 | AT5G67385.1 | 39.490 | 471 | 256 | 9 | 24 | 483 | 22 | 474 | 7.20e-99 | 315 |
| Msa0713970 | AT5G48800.1 | 39.241 | 474 | 265 | 8 | 22 | 489 | 36 | 492 | 1.42e-96 | 309 |
| Msa0713970 | AT1G03010.2 | 35.688 | 552 | 304 | 11 | 25 | 546 | 7 | 537 | 3.44e-94 | 302 |
| Msa0713970 | AT1G03010.3 | 35.612 | 556 | 307 | 11 | 21 | 546 | 29 | 563 | 6.57e-94 | 302 |
| Msa0713970 | AT1G03010.1 | 35.688 | 552 | 304 | 11 | 25 | 546 | 34 | 564 | 9.14e-94 | 302 |
| Msa0713970 | AT5G66560.1 | 34.806 | 566 | 270 | 13 | 22 | 505 | 14 | 562 | 6.07e-91 | 295 |
| Msa0713970 | AT2G47860.1 | 37.267 | 483 | 256 | 11 | 25 | 483 | 35 | 494 | 1.12e-90 | 294 |
| Msa0713970 | AT5G10250.2 | 33.592 | 515 | 257 | 9 | 11 | 483 | 35 | 506 | 9.09e-89 | 288 |
| Msa0713970 | AT3G08660.1 | 36.957 | 506 | 272 | 16 | 23 | 515 | 30 | 501 | 2.49e-88 | 286 |
| Msa0713970 | AT5G67385.4 | 38.702 | 447 | 245 | 9 | 48 | 483 | 1 | 429 | 8.13e-88 | 284 |
| Msa0713970 | AT5G67385.5 | 38.702 | 447 | 245 | 9 | 48 | 483 | 1 | 429 | 8.13e-88 | 284 |
| Msa0713970 | AT5G67385.2 | 38.702 | 447 | 245 | 9 | 48 | 483 | 1 | 429 | 8.13e-88 | 284 |
| Msa0713970 | AT5G67385.3 | 38.702 | 447 | 245 | 9 | 48 | 483 | 1 | 429 | 8.13e-88 | 284 |
| Msa0713970 | AT5G10250.1 | 34.274 | 496 | 251 | 9 | 18 | 483 | 41 | 491 | 7.09e-87 | 283 |
| Msa0713970 | AT5G66560.3 | 34.672 | 548 | 259 | 13 | 40 | 505 | 3 | 533 | 3.08e-86 | 282 |
| Msa0713970 | AT2G47860.3 | 35.363 | 509 | 253 | 12 | 25 | 483 | 35 | 517 | 1.95e-85 | 281 |
| Msa0713970 | AT3G08570.1 | 34.855 | 482 | 284 | 10 | 23 | 489 | 30 | 496 | 7.95e-84 | 275 |
| Msa0713970 | AT5G66560.4 | 36.842 | 475 | 246 | 11 | 68 | 505 | 66 | 523 | 7.37e-83 | 273 |
| Msa0713970 | AT3G50840.1 | 36.626 | 486 | 247 | 11 | 22 | 483 | 11 | 459 | 5.72e-82 | 269 |
| Msa0713970 | AT5G03250.2 | 38.876 | 427 | 226 | 11 | 111 | 514 | 1 | 415 | 6.36e-82 | 266 |
| Msa0713970 | AT2G30520.1 | 34.864 | 479 | 257 | 8 | 24 | 483 | 27 | 469 | 1.14e-80 | 266 |
| Msa0713970 | AT3G08660.3 | 36.632 | 475 | 254 | 16 | 54 | 515 | 1 | 441 | 7.12e-79 | 259 |
| Msa0713970 | AT3G49970.1 | 35.469 | 437 | 225 | 9 | 40 | 468 | 7 | 394 | 9.59e-76 | 251 |
| Msa0713970 | AT3G49970.2 | 35.469 | 437 | 225 | 9 | 40 | 468 | 7 | 394 | 9.59e-76 | 251 |
| Msa0713970 | AT2G30520.2 | 34.430 | 456 | 244 | 8 | 47 | 483 | 2 | 421 | 1.80e-72 | 243 |
| Msa0713970 | AT2G30520.3 | 34.430 | 456 | 244 | 8 | 47 | 483 | 2 | 421 | 1.80e-72 | 243 |
| Msa0713970 | AT3G50840.2 | 35.652 | 460 | 235 | 11 | 48 | 483 | 1 | 423 | 1.38e-70 | 238 |
| Msa0713970 | AT3G50840.3 | 35.652 | 460 | 235 | 11 | 48 | 483 | 1 | 423 | 1.38e-70 | 238 |
| Msa0713970 | AT2G47860.4 | 34.862 | 436 | 237 | 11 | 21 | 432 | 31 | 443 | 5.06e-68 | 229 |
| Msa0713970 | AT3G08660.2 | 36.364 | 418 | 226 | 13 | 23 | 432 | 30 | 415 | 1.11e-65 | 222 |
| Msa0713970 | AT2G47860.6 | 33.115 | 459 | 237 | 12 | 21 | 432 | 31 | 466 | 6.62e-63 | 216 |
| Msa0713970 | AT5G66560.2 | 32.505 | 483 | 237 | 12 | 22 | 432 | 14 | 479 | 1.45e-62 | 215 |
| Msa0713970 | AT5G64330.2 | 40.959 | 271 | 137 | 6 | 7 | 259 | 33 | 298 | 2.06e-60 | 213 |
| Msa0713970 | AT5G64330.2 | 41.379 | 261 | 122 | 3 | 270 | 499 | 373 | 633 | 4.86e-54 | 196 |
| Msa0713970 | AT2G47860.5 | 35.250 | 400 | 208 | 10 | 111 | 483 | 1 | 376 | 2.99e-60 | 210 |
| Msa0713970 | AT2G47860.2 | 35.250 | 400 | 208 | 10 | 111 | 483 | 1 | 376 | 2.99e-60 | 210 |
| Msa0713970 | AT5G64330.1 | 40.959 | 271 | 137 | 6 | 7 | 259 | 33 | 298 | 5.89e-60 | 214 |
| Msa0713970 | AT5G64330.1 | 39.465 | 299 | 155 | 5 | 270 | 545 | 373 | 668 | 9.18e-56 | 202 |
| Msa0713970 | AT5G48130.1 | 28.629 | 496 | 297 | 13 | 25 | 502 | 37 | 493 | 6.88e-57 | 203 |
| Msa0713970 | AT5G64330.3 | 41.379 | 261 | 122 | 3 | 270 | 499 | 314 | 574 | 1.94e-54 | 196 |
| Msa0713970 | AT5G64330.3 | 40.083 | 242 | 122 | 6 | 37 | 259 | 2 | 239 | 9.86e-50 | 183 |
| Msa0713970 | AT1G52770.1 | 33.898 | 354 | 198 | 6 | 212 | 545 | 28 | 365 | 1.35e-52 | 187 |
| Msa0713970 | AT3G15570.1 | 34.343 | 297 | 157 | 6 | 212 | 485 | 29 | 310 | 1.82e-45 | 168 |
| Msa0713970 | AT5G17580.2 | 27.651 | 481 | 315 | 8 | 14 | 487 | 7 | 461 | 2.43e-43 | 164 |
| Msa0713970 | AT5G17580.1 | 28.051 | 467 | 303 | 8 | 28 | 487 | 6 | 446 | 4.03e-42 | 160 |
| Msa0713970 | AT3G19850.1 | 25.113 | 442 | 291 | 8 | 68 | 490 | 52 | 472 | 7.40e-41 | 157 |
| Msa0713970 | AT1G50280.1 | 25.053 | 471 | 316 | 11 | 29 | 477 | 5 | 460 | 3.34e-39 | 151 |
| Msa0713970 | AT1G50280.2 | 25.882 | 425 | 285 | 9 | 68 | 477 | 18 | 427 | 5.56e-39 | 150 |
| Msa0713970 | AT3G03510.1 | 29.056 | 413 | 233 | 10 | 76 | 483 | 4 | 361 | 1.50e-38 | 148 |
| Msa0713970 | AT3G22104.1 | 25.714 | 455 | 285 | 15 | 28 | 468 | 5 | 420 | 1.66e-28 | 120 |
| Msa0713970 | AT3G22104.4 | 24.737 | 380 | 239 | 11 | 98 | 468 | 4 | 345 | 1.12e-19 | 92.4 |
| Msa0713970 | AT3G22104.2 | 24.737 | 380 | 239 | 11 | 98 | 468 | 4 | 345 | 1.12e-19 | 92.4 |
| Msa0713970 | AT3G22104.3 | 24.737 | 380 | 239 | 11 | 98 | 468 | 4 | 345 | 1.12e-19 | 92.4 |
| Msa0713970 | AT3G49900.1 | 42.857 | 98 | 49 | 4 | 387 | 482 | 214 | 306 | 9.88e-15 | 77.8 |
| Msa0713970 | AT3G49900.2 | 41.584 | 101 | 49 | 5 | 387 | 482 | 214 | 309 | 4.63e-13 | 72.4 |
Find 221 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATATTGTTTCAGGTTTA+TGG | 0.106681 | 5_1:-6542069 | None:intergenic |
| TGCCATTGACATGTATTTAA+AGG | 0.151112 | 5_1:+6546066 | Msa0713970:CDS |
| CCACTTTCTCTCTCAACTTA+TGG | 0.174156 | 5_1:-6541816 | None:intergenic |
| GGTGATTTGAAAAGCTATTT+TGG | 0.174997 | 5_1:+6543065 | Msa0713970:five_prime_UTR |
| CACAAAGAATAGATTATTAT+TGG | 0.178237 | 5_1:+6545592 | Msa0713970:CDS |
| GAAAACACAGATATTGTTTC+AGG | 0.209047 | 5_1:-6542076 | None:intergenic |
| CGGTTTATTGCCGGTAGATA+TGG | 0.212856 | 5_1:+6545625 | Msa0713970:CDS |
| TTTATCTTGGCCGGTCTCTT+TGG | 0.239494 | 5_1:+6542797 | Msa0713970:five_prime_UTR |
| CACAAACTCTTAACCAAGTT+TGG | 0.239988 | 5_1:-6543037 | None:intergenic |
| ACAACCAATGGAAATGTTTC+CGG | 0.248773 | 5_1:+6545485 | Msa0713970:CDS |
| GAACATGTTGCTTACTAAAA+TGG | 0.270449 | 5_1:-6542829 | None:intergenic |
| AAGCTTAGAGAATAACTTCT+TGG | 0.287524 | 5_1:-6546647 | None:intergenic |
| AAAATTATGTTTCTGAATCT+TGG | 0.287780 | 5_1:-6542620 | None:intergenic |
| AGAAACAAAGAAAGGGAAAA+AGG | 0.292827 | 5_1:+6541742 | None:intergenic |
| AAGTGGGAACATTCTGAAAT+TGG | 0.292864 | 5_1:+6541833 | Msa0713970:five_prime_UTR |
| AAGAAACACAAAGGTTTGTT+TGG | 0.305808 | 5_1:-6542037 | None:intergenic |
| CATTGTTGCAATTTATTTGC+AGG | 0.311860 | 5_1:+6547263 | Msa0713970:three_prime_UTR |
| AGATCAAAGTAGAAGATAAA+AGG | 0.321417 | 5_1:-6542982 | None:intergenic |
| TGAATGTTGAGTATGGAATT+TGG | 0.329924 | 5_1:+6542501 | Msa0713970:five_prime_UTR |
| CTGATCTTCCCGGTTCCATC+AGG | 0.334384 | 5_1:+6546386 | Msa0713970:CDS |
| TTCGATGGAAGACGAATTGC+AGG | 0.353029 | 5_1:+6545868 | Msa0713970:CDS |
| CAACCAATGGAAATGTTTCC+GGG | 0.363516 | 5_1:+6545486 | Msa0713970:CDS |
| GAAGTATTTGATACCATCTT+GGG | 0.363641 | 5_1:-6545902 | None:intergenic |
| CAAAAGATGAGGCTTGAAAA+AGG | 0.364405 | 5_1:-6541920 | None:intergenic |
| AAAATGATGGAGATAATGTT+AGG | 0.372524 | 5_1:+6543150 | Msa0713970:CDS |
| AGAAGTTATTCTCTAAGCTT+TGG | 0.373875 | 5_1:+6546650 | Msa0713970:CDS |
| GACTATTGTCGGTTTATTGC+CGG | 0.376124 | 5_1:+6545616 | Msa0713970:CDS |
| CGACCATGGAAGAAGTGATT+TGG | 0.379163 | 5_1:-6545228 | None:intergenic |
| CAAACTTGGTTAAGAGTTTG+TGG | 0.383904 | 5_1:+6543038 | Msa0713970:five_prime_UTR |
| ATGCAATGCCCTGATGGAAC+CGG | 0.384464 | 5_1:-6546395 | None:intergenic |
| AGAATAACTTCTTGGACATA+AGG | 0.384603 | 5_1:-6546639 | None:intergenic |
| ATTCACATCCACGACATTCC+TGG | 0.387097 | 5_1:+6544993 | Msa0713970:CDS |
| ATTGAAAGTGGCTATTCAAC+TGG | 0.388498 | 5_1:+6545679 | Msa0713970:CDS |
| AAGGTTGCCTGGTTTCAATA+AGG | 0.390063 | 5_1:+6545547 | Msa0713970:CDS |
| CGAAGTATTTGATACCATCT+TGG | 0.390134 | 5_1:-6545903 | None:intergenic |
| TTGCCTAGTGTAGTTTGTAT+TGG | 0.395707 | 5_1:+6547151 | Msa0713970:three_prime_UTR |
| TCCTTTACGTGTCGTTGTAC+AGG | 0.397548 | 5_1:+6546303 | Msa0713970:CDS |
| CGGCCAAGATAAACCATGTT+AGG | 0.398977 | 5_1:-6542787 | None:intergenic |
| TCTTCCACCCACCAATCCTT+TGG | 0.399577 | 5_1:-6545413 | None:intergenic |
| AAATACTTCGAGCAAGATAA+AGG | 0.402925 | 5_1:+6545916 | Msa0713970:CDS |
| AACAATGACGGTGGTGGTAT+AGG | 0.404070 | 5_1:+6546577 | Msa0713970:CDS |
| TCGATCACTTTGGTAGCATT+AGG | 0.404204 | 5_1:+6546847 | Msa0713970:three_prime_UTR |
| GCACATATTTCAAAAGCAAC+AGG | 0.406384 | 5_1:-6545020 | None:intergenic |
| ATCTAACTAGCCTTGGTTTG+TGG | 0.408714 | 5_1:+6542920 | Msa0713970:five_prime_UTR |
| TCTAACTAGCCTTGGTTTGT+GGG | 0.409928 | 5_1:+6542921 | Msa0713970:five_prime_UTR |
| TGATTATAGTACAACAAAAC+CGG | 0.410417 | 5_1:-6546997 | None:intergenic |
| TGGTTAAGAGTTTGTGGAGT+AGG | 0.420229 | 5_1:+6543044 | Msa0713970:five_prime_UTR |
| AGGTTGCCTGGTTTCAATAA+GGG | 0.420841 | 5_1:+6545548 | Msa0713970:CDS |
| TCTCCTAACATGGTTTATCT+TGG | 0.424055 | 5_1:+6542784 | Msa0713970:five_prime_UTR |
| CTGACATAGTCGTTAATGTT+GGG | 0.428946 | 5_1:+6544708 | Msa0713970:CDS |
| TAGTGTGTGAATGTTGAGTA+TGG | 0.431493 | 5_1:+6542494 | Msa0713970:five_prime_UTR |
| GAAAAGAATATGTAGGTTGA+TGG | 0.432349 | 5_1:+6546225 | Msa0713970:CDS |
| ACGAGCACTCCTGATCTTCC+CGG | 0.435726 | 5_1:+6546376 | Msa0713970:CDS |
| CTCGCTGAAGTTATTGAAAG+TGG | 0.436588 | 5_1:+6545667 | Msa0713970:CDS |
| CATATATTTGTTCAGGTATG+TGG | 0.437799 | 5_1:+6544670 | Msa0713970:intron |
| AAACTGAGAAGAGGCAGATT+AGG | 0.438663 | 5_1:-6545983 | None:intergenic |
| GGTTTATTGCCGGTAGATAT+GGG | 0.439454 | 5_1:+6545626 | Msa0713970:CDS |
| CTGATGGAACCGGGAAGATC+AGG | 0.442940 | 5_1:-6546385 | None:intergenic |
| AACAGTAGAAGCAGGGCTTT+CGG | 0.443529 | 5_1:-6546716 | None:intergenic |
| CTTGGTTTGTGGGAAAGATT+CGG | 0.444335 | 5_1:+6542931 | Msa0713970:five_prime_UTR |
| AAGATGAAGTTTATGAAACT+TGG | 0.446570 | 5_1:+6543107 | Msa0713970:exon |
| GAATGTCTCCTACTTCTAGA+TGG | 0.446578 | 5_1:-6546760 | None:intergenic |
| CCATAAGTTGAGAGAGAAAG+TGG | 0.447068 | 5_1:+6541816 | Msa0713970:five_prime_UTR |
| GTGGTTCTCACGGTAGTTCA+AGG | 0.447533 | 5_1:+6546422 | Msa0713970:CDS |
| AAATTTCATCTAACTAGCCT+TGG | 0.450635 | 5_1:+6542913 | Msa0713970:five_prime_UTR |
| AAAAGCTCCCATCGGAAAAT+GGG | 0.457088 | 5_1:+6545348 | Msa0713970:CDS |
| AACAAAACCGGGTCCCTCAT+AGG | 0.460036 | 5_1:-6546985 | None:intergenic |
| TTATTATTGGAGACTATTGT+CGG | 0.461332 | 5_1:+6545605 | Msa0713970:CDS |
| CATTGGTTGTAATAGTTGAC+AGG | 0.463502 | 5_1:-6545472 | None:intergenic |
| AGTGGTCATACACATATAAC+AGG | 0.463792 | 5_1:+6545324 | Msa0713970:CDS |
| TTTGTTGTTGTTTCCAACAA+TGG | 0.469010 | 5_1:-6542589 | None:intergenic |
| TCCTCAACAACAGTAGAAGC+AGG | 0.469108 | 5_1:-6546724 | None:intergenic |
| CCACTTAAGATGAGCCTATG+AGG | 0.469406 | 5_1:+6546971 | Msa0713970:three_prime_UTR |
| TGCTGTTTCTGTCACTACTC+TGG | 0.469581 | 5_1:-6546552 | None:intergenic |
| GATGTACGAGACCATTGAAA+AGG | 0.472920 | 5_1:+6545121 | Msa0713970:CDS |
| ATCCCATTCCTCTTCTGTGT+TGG | 0.473339 | 5_1:-6546455 | None:intergenic |
| GTTGGTAATGTCTCCTAACA+TGG | 0.479028 | 5_1:+6542774 | Msa0713970:five_prime_UTR |
| TGAGGTATGATGGTTGTTTG+TGG | 0.480322 | 5_1:+6546917 | Msa0713970:three_prime_UTR |
| AACTAATGGTTCCAAAGGAT+TGG | 0.481019 | 5_1:+6545402 | Msa0713970:CDS |
| GCCTATCCTCCGCATCAGTT+CGG | 0.483793 | 5_1:-6545723 | None:intergenic |
| CTAACATGGTTTATCTTGGC+CGG | 0.484256 | 5_1:+6542788 | Msa0713970:five_prime_UTR |
| CCGTAGCCTCCTCAAGCCTC+TGG | 0.484339 | 5_1:-6545745 | None:intergenic |
| TTCCTCTTCTGTGTTGGTCG+TGG | 0.488018 | 5_1:-6546449 | None:intergenic |
| GTGGTGTCTAAATCCATTGT+TGG | 0.491175 | 5_1:+6542576 | Msa0713970:five_prime_UTR |
| ATGAATGTGTTTGTGTGTGT+TGG | 0.492957 | 5_1:+6542737 | Msa0713970:five_prime_UTR |
| ATGTACGAGACCATTGAAAA+GGG | 0.494912 | 5_1:+6545122 | Msa0713970:CDS |
| AAGACGTAAAAGTTCTGAAA+GGG | 0.496037 | 5_1:+6546494 | Msa0713970:CDS |
| AGCTTCTCCGACAACTGCCC+CGG | 0.496223 | 5_1:-6545504 | None:intergenic |
| CCTCATAGGCTCATCTTAAG+TGG | 0.498922 | 5_1:-6546971 | None:intergenic |
| AACCTTTAAATACATGTCAA+TGG | 0.499724 | 5_1:-6546068 | None:intergenic |
| CATAGCTACCAAGGCTTCGA+TGG | 0.501566 | 5_1:+6545286 | Msa0713970:CDS |
| GGGAACATTCTGAAATTGGT+TGG | 0.502141 | 5_1:+6541837 | Msa0713970:five_prime_UTR |
| TATGTTATGCAGGAACATCC+TGG | 0.502662 | 5_1:+6546184 | Msa0713970:intron |
| TGTATAATCGTCGATCACTT+TGG | 0.503342 | 5_1:+6546837 | Msa0713970:three_prime_UTR |
| GCTTCAACAACATCATCATC+AGG | 0.503463 | 5_1:+6546349 | Msa0713970:CDS |
| ATATGTGCAAAGTTCTGTTA+TGG | 0.503531 | 5_1:+6545035 | Msa0713970:CDS |
| GACTGTGGCTTGAGGTATGA+TGG | 0.504805 | 5_1:+6546907 | Msa0713970:three_prime_UTR |
| GTGAGAGGAAAAGAATATGT+AGG | 0.505622 | 5_1:+6546218 | Msa0713970:CDS |
| GACCAACACAGAAGAGGAAT+GGG | 0.506254 | 5_1:+6546453 | Msa0713970:CDS |
| TGAACTACCGTGAGAACCAC+CGG | 0.506443 | 5_1:-6546419 | None:intergenic |
| CGGTGTGAGGAAACAACTAA+TGG | 0.506709 | 5_1:+6545388 | Msa0713970:CDS |
| AATCTACGCCATCTAGAAGT+AGG | 0.507067 | 5_1:+6546752 | Msa0713970:CDS |
| ACCGGGATGCAATGCCCTGA+TGG | 0.507424 | 5_1:-6546401 | None:intergenic |
| TCCTGAAAATGCTGGAGTTG+AGG | 0.508475 | 5_1:-6545172 | None:intergenic |
| TGCCCCGGAAACATTTCCAT+TGG | 0.509798 | 5_1:-6545489 | None:intergenic |
| CTGTCAACTATTACAACCAA+TGG | 0.510029 | 5_1:+6545473 | Msa0713970:CDS |
| ACCTGTACAACGACACGTAA+AGG | 0.510885 | 5_1:-6546304 | None:intergenic |
| TATGACCACTCCACCTTGGA+TGG | 0.511110 | 5_1:-6545311 | None:intergenic |
| TCAAAAGCAACAGGTCCTCC+AGG | 0.511400 | 5_1:-6545011 | None:intergenic |
| CATCGAAGCCTTGGTAGCTA+TGG | 0.511487 | 5_1:-6545285 | None:intergenic |
| AATGTTTCCGGGGCAGTTGT+CGG | 0.511899 | 5_1:+6545497 | Msa0713970:CDS |
| TTTAATAGAGAGTGGGGCGG+TGG | 0.512625 | 5_1:+6542640 | Msa0713970:five_prime_UTR |
| CGACCAACACAGAAGAGGAA+TGG | 0.512670 | 5_1:+6546452 | Msa0713970:CDS |
| CAGGTATGTGGCAACTGAGC+TGG | 0.513876 | 5_1:+6544682 | Msa0713970:intron |
| CCCTGCTTCTACTGTTGTTG+AGG | 0.513974 | 5_1:+6546723 | Msa0713970:CDS |
| ATTGTTGCAATTTATTTGCA+GGG | 0.515311 | 5_1:+6547264 | Msa0713970:three_prime_UTR |
| GGTTAATGAGAAACAAAGAA+AGG | 0.515408 | 5_1:+6541734 | None:intergenic |
| TTTCCAGCTCCTGAAAATGC+TGG | 0.516969 | 5_1:-6545180 | None:intergenic |
| CAACCAAATCACTTCTTCCA+TGG | 0.518084 | 5_1:+6545225 | Msa0713970:CDS |
| GGATGGATCCATCGAAGCCT+TGG | 0.518873 | 5_1:-6545294 | None:intergenic |
| GTTAATGAGAAACAAAGAAA+GGG | 0.524317 | 5_1:+6541735 | None:intergenic |
| TCCATCAGGGCATTGCATCC+CGG | 0.525817 | 5_1:+6546400 | Msa0713970:CDS |
| TACACCTCTAGAAGGTTGCC+TGG | 0.530328 | 5_1:+6545536 | Msa0713970:CDS |
| ATCTTAAGTTCCTCCGACCA+TGG | 0.530439 | 5_1:-6545242 | None:intergenic |
| TGCAATGCCCTGATGGAACC+GGG | 0.532513 | 5_1:-6546394 | None:intergenic |
| AGGAAAGCTTGATACCAAAT+CGG | 0.533858 | 5_1:-6546017 | None:intergenic |
| TATGTAGGTTGATGGACTGC+AGG | 0.536125 | 5_1:+6546233 | Msa0713970:CDS |
| TAATGGTTCCAAAGGATTGG+TGG | 0.538641 | 5_1:+6545405 | Msa0713970:CDS |
| CCAGAGGCTTGAGGAGGCTA+CGG | 0.540725 | 5_1:+6545745 | Msa0713970:CDS |
| TTGCCGGTAGATATGGGAAG+TGG | 0.543251 | 5_1:+6545632 | Msa0713970:CDS |
| GTAGCTGCTAACAAAATGAA+AGG | 0.551181 | 5_1:+6546613 | Msa0713970:CDS |
| TTGCATCCCGGTGGTTCTCA+CGG | 0.551268 | 5_1:+6546412 | Msa0713970:CDS |
| TCCGAACTGATGCGGAGGAT+AGG | 0.560564 | 5_1:+6545722 | Msa0713970:CDS |
| GGGAAAGATTCGGTCATACA+AGG | 0.565114 | 5_1:+6542941 | Msa0713970:five_prime_UTR |
| ACTAACTAGAATCAAATGCT+AGG | 0.566777 | 5_1:+6547123 | Msa0713970:three_prime_UTR |
| TGCAAAGTTCTGTTATGGTA+TGG | 0.567366 | 5_1:+6545040 | Msa0713970:CDS |
| TCTTTGTGATATCACCACTC+TGG | 0.567643 | 5_1:-6545577 | None:intergenic |
| TGTTGTACTATAATCAGAGA+AGG | 0.567780 | 5_1:+6547004 | Msa0713970:three_prime_UTR |
| GAAACAACTAATGGTTCCAA+AGG | 0.569885 | 5_1:+6545397 | Msa0713970:CDS |
| AGTTGCAGCTCGCTGTGCAG+CGG | 0.570192 | 5_1:+6545088 | Msa0713970:CDS |
| TAAGTGCGTACACCTCTAGA+AGG | 0.571808 | 5_1:+6545528 | Msa0713970:CDS |
| AGACCGTCATGAGACTGTCT+AGG | 0.573268 | 5_1:-6546037 | None:intergenic |
| GTGGTGTCAGATAGAACTAG+TGG | 0.574514 | 5_1:+6542659 | Msa0713970:five_prime_UTR |
| GAAGACGTAAAAGTTCTGAA+AGG | 0.575342 | 5_1:+6546493 | Msa0713970:CDS |
| GTAACAAAGTCCAAAGAGAC+CGG | 0.578877 | 5_1:-6542807 | None:intergenic |
| AGATGAGCCTATGAGGGACC+CGG | 0.580189 | 5_1:+6546978 | Msa0713970:three_prime_UTR |
| GAGGATAGGCCAGAGGCTTG+AGG | 0.582061 | 5_1:+6545736 | Msa0713970:CDS |
| TGATCTTCCCGGTTCCATCA+GGG | 0.583101 | 5_1:+6546387 | Msa0713970:CDS |
| CACTTAAGATGAGCCTATGA+GGG | 0.584475 | 5_1:+6546972 | Msa0713970:three_prime_UTR |
| AATGGTTCCAAAGGATTGGT+GGG | 0.585467 | 5_1:+6545406 | Msa0713970:CDS |
| CAAAGGAATGGCAAAAGATG+AGG | 0.585917 | 5_1:-6541931 | None:intergenic |
| ACATGAACCAATCAAAGGAA+TGG | 0.586672 | 5_1:-6541943 | None:intergenic |
| TCTGACATAGTCGTTAATGT+TGG | 0.590158 | 5_1:+6544707 | Msa0713970:CDS |
| TGTGTTTGTGTAGCTAGCTG+TGG | 0.593299 | 5_1:+6541865 | Msa0713970:five_prime_UTR |
| GCTTTCGGACGTATCAGAGC+TGG | 0.595171 | 5_1:-6546701 | None:intergenic |
| GTTTGTGTAGCTAGCTGTGG+TGG | 0.597001 | 5_1:+6541868 | Msa0713970:five_prime_UTR |
| CTCGCTTATAGAGATCAAGT+TGG | 0.598194 | 5_1:-6545448 | None:intergenic |
| AAAATGGGAACGAAGCACAC+TGG | 0.598218 | 5_1:+6545363 | Msa0713970:CDS |
| GTTAGTTTCAAACACAGATG+AGG | 0.598340 | 5_1:+6544959 | Msa0713970:CDS |
| CAAATCACTTCTTCCATGGT+CGG | 0.598798 | 5_1:+6545229 | Msa0713970:CDS |
| TGGTGTCAGATAGAACTAGT+GGG | 0.601505 | 5_1:+6542660 | Msa0713970:five_prime_UTR |
| GAGCCACTTCCCATATCTAC+CGG | 0.602916 | 5_1:-6545635 | None:intergenic |
| AGCAACAACAATGACGGTGG+TGG | 0.606571 | 5_1:+6546571 | Msa0713970:CDS |
| AGAAGAGGAATGGGATGCTG+TGG | 0.608026 | 5_1:+6546462 | Msa0713970:CDS |
| GGCTTCGATGGATCCATCCA+AGG | 0.608155 | 5_1:+6545298 | Msa0713970:CDS |
| GAGGCTTGAGGAGGCTACGG+TGG | 0.609045 | 5_1:+6545748 | Msa0713970:CDS |
| AAACTACATGAACCAATCAA+AGG | 0.610942 | 5_1:-6541948 | None:intergenic |
| CGAATCTTTCCCACAAACCA+AGG | 0.613263 | 5_1:-6542930 | None:intergenic |
| GGAGATCAGAAGCCCCAAGA+TGG | 0.614219 | 5_1:+6545889 | Msa0713970:CDS |
| AGGAGTTCAAAGAAGGGACA+TGG | 0.614723 | 5_1:+6542462 | Msa0713970:intron |
| TGACATAGTCGTTAATGTTG+GGG | 0.615279 | 5_1:+6544709 | Msa0713970:CDS |
| CATAAACATAAACATAAACA+AGG | 0.615372 | 5_1:-6541974 | None:intergenic |
| AAGTATTTGATACCATCTTG+GGG | 0.615466 | 5_1:-6545901 | None:intergenic |
| CGGTGAGATCCGAACTGATG+CGG | 0.621378 | 5_1:+6545714 | Msa0713970:CDS |
| AAGCACACTGGAACGGTGTG+AGG | 0.624811 | 5_1:+6545375 | Msa0713970:CDS |
| CTGAGACTGACTGTGGCTTG+AGG | 0.625186 | 5_1:+6546899 | Msa0713970:three_prime_UTR |
| AAACCAATACAAACTACACT+AGG | 0.625511 | 5_1:-6547154 | None:intergenic |
| CAGGTCCTCCAGGAATGTCG+TGG | 0.625588 | 5_1:-6545001 | None:intergenic |
| GATTATAGTACAACAAAACC+GGG | 0.627016 | 5_1:-6546996 | None:intergenic |
| TGGATCCATCCAAGGTGGAG+TGG | 0.627703 | 5_1:+6545306 | Msa0713970:CDS |
| TGTGTATGACCACTCCACCT+TGG | 0.631504 | 5_1:-6545315 | None:intergenic |
| CTGGAATCAGCAAAAGTGAG+AGG | 0.633326 | 5_1:+6546203 | Msa0713970:CDS |
| TACCACGACCAACACAGAAG+AGG | 0.634888 | 5_1:+6546447 | Msa0713970:CDS |
| ACACGAGCATCAATCTTCGA+TGG | 0.639556 | 5_1:+6545853 | Msa0713970:CDS |
| ATGTTCACAAAACTGAGAAG+AGG | 0.639567 | 5_1:-6545992 | None:intergenic |
| GGGAACGAAGCACACTGGAA+CGG | 0.640951 | 5_1:+6545368 | Msa0713970:CDS |
| AGAAACAGCAACAACAATGA+CGG | 0.642249 | 5_1:+6546565 | Msa0713970:CDS |
| AATAAGGGTGTTATCCAGAG+TGG | 0.642711 | 5_1:+6545563 | Msa0713970:CDS |
| TATCGAGTCCATAGCTACCA+AGG | 0.646357 | 5_1:+6545277 | Msa0713970:CDS |
| TAGCTATGGACTCGATACAA+TGG | 0.647840 | 5_1:-6545271 | None:intergenic |
| ATCACTTCTTCCATGGTCGG+AGG | 0.648232 | 5_1:+6545232 | Msa0713970:CDS |
| GGTGTCAGATAGAACTAGTG+GGG | 0.648820 | 5_1:+6542661 | Msa0713970:five_prime_UTR |
| GCTGCACTAAAACTATCAAG+TGG | 0.649520 | 5_1:+6546523 | Msa0713970:CDS |
| TTGATATCAAAGAAACACAA+AGG | 0.650391 | 5_1:-6542046 | None:intergenic |
| GAAACCAGGCAACCTTCTAG+AGG | 0.650655 | 5_1:-6545540 | None:intergenic |
| GATATGGGAAGTGGCTCATG+CGG | 0.650973 | 5_1:+6545641 | Msa0713970:CDS |
| AGACGTAAAAGTTCTGAAAG+GGG | 0.651354 | 5_1:+6546495 | Msa0713970:CDS |
| TCAACTGGATTGTGAAGTGT+CGG | 0.651439 | 5_1:+6545694 | Msa0713970:CDS |
| CCTCAACAACAGTAGAAGCA+GGG | 0.658156 | 5_1:-6546723 | None:intergenic |
| GAACTACCGTGAGAACCACC+GGG | 0.662467 | 5_1:-6546418 | None:intergenic |
| GATAGGCCAGAGGCTTGAGG+AGG | 0.663205 | 5_1:+6545739 | Msa0713970:CDS |
| ATCAGGGCATTGCATCCCGG+TGG | 0.664334 | 5_1:+6546403 | Msa0713970:CDS |
| TGAGATCCGAACTGATGCGG+AGG | 0.666675 | 5_1:+6545717 | Msa0713970:CDS |
| ATAACACCCTTATTGAAACC+AGG | 0.668210 | 5_1:-6545554 | None:intergenic |
| AACCAATGGAAATGTTTCCG+GGG | 0.669317 | 5_1:+6545487 | Msa0713970:CDS |
| GCACTAAAACTATCAAGTGG+AGG | 0.670646 | 5_1:+6546526 | Msa0713970:CDS |
| GGTTCCAAAGGATTGGTGGG+TGG | 0.674076 | 5_1:+6545409 | Msa0713970:CDS |
| CATAAGTTGAGAGAGAAAGT+GGG | 0.674517 | 5_1:+6541817 | Msa0713970:five_prime_UTR |
| CGCTTAACCTAACAAAACAG+TGG | 0.676154 | 5_1:-6547197 | None:intergenic |
| TTTCCTAGACAGTCTCATGA+CGG | 0.681338 | 5_1:+6546034 | Msa0713970:CDS |
| TGCATGCAGTGCAGAATGAG+CGG | 0.681971 | 5_1:+6546278 | Msa0713970:CDS |
| ACGATTATACAACGATGCAA+CGG | 0.685114 | 5_1:-6546825 | None:intergenic |
| CTTCTAGCTGAGACTGACTG+TGG | 0.687790 | 5_1:+6546892 | Msa0713970:three_prime_UTR |
| GATCACGTGCAATCTCAGCA+AGG | 0.693796 | 5_1:-6545961 | None:intergenic |
| TGATGCGGAGGATAGGCCAG+AGG | 0.699869 | 5_1:+6545729 | Msa0713970:CDS |
| AACAGCAACAACAATGACGG+TGG | 0.701652 | 5_1:+6546568 | Msa0713970:CDS |
| GTGGCTGTCATCAAAAGATG+AGG | 0.704835 | 5_1:+6541887 | Msa0713970:five_prime_UTR |
| TCAACAACATCATCATCAGG+AGG | 0.705468 | 5_1:+6546352 | Msa0713970:CDS |
| CACATCCACGACATTCCTGG+AGG | 0.714031 | 5_1:+6544996 | Msa0713970:CDS |
| GTGTCAGATAGAACTAGTGG+GGG | 0.721905 | 5_1:+6542662 | Msa0713970:five_prime_UTR |
| TTCGATGGATCCATCCAAGG+TGG | 0.725031 | 5_1:+6545301 | Msa0713970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTACAAAATAAAGTTTAA+CGG | + | chr5_1:6543597-6543616 | Msa0713970:intron | 10.0% |
| !! | ACATATTAAATACAAAATTA+AGG | - | chr5_1:6544534-6544553 | None:intergenic | 10.0% |
| !!! | AAAATTTAAAATAAGAGGAT+CGG | - | chr5_1:6544191-6544210 | None:intergenic | 15.0% |
| !! | TATTAAATACAAAATTAAGG+CGG | - | chr5_1:6544531-6544550 | None:intergenic | 15.0% |
| !!! | TGATATTTTATGTTTTCTTT+TGG | + | chr5_1:6544613-6544632 | Msa0713970:intron | 15.0% |
| !! | TTGTATACAATAATTACAAA+AGG | - | chr5_1:6544804-6544823 | None:intergenic | 15.0% |
| !! | CATAAACATAAACATAAACA+AGG | - | chr5_1:6541977-6541996 | None:intergenic | 20.0% |
| !! | TGAAACATAAAAATCAACAT+GGG | - | chr5_1:6542192-6542211 | None:intergenic | 20.0% |
| !! | ATGAAACATAAAAATCAACA+TGG | - | chr5_1:6542193-6542212 | None:intergenic | 20.0% |
| !!! | AGCATTTTTTTTTAATCCAA+TGG | + | chr5_1:6542329-6542348 | Msa0713970:intron | 20.0% |
| !!! | AAAATTATGTTTCTGAATCT+TGG | - | chr5_1:6542623-6542642 | None:intergenic | 20.0% |
| !!! | AACATAATTTTAATAGAGAG+TGG | + | chr5_1:6542632-6542651 | Msa0713970:five_prime_UTR | 20.0% |
| !!! | ACATAATTTTAATAGAGAGT+GGG | + | chr5_1:6542633-6542652 | Msa0713970:five_prime_UTR | 20.0% |
| !!! | TTTGAATCATATGTTATTTC+AGG | + | chr5_1:6543195-6543214 | Msa0713970:intron | 20.0% |
| !!! | TTAGTATTATTTTGTCATGA+TGG | + | chr5_1:6543319-6543338 | Msa0713970:intron | 20.0% |
| !!! | TTAAGTTGTTTATTGAAACA+GGG | - | chr5_1:6543529-6543548 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATTGAAAC+AGG | - | chr5_1:6543530-6543549 | None:intergenic | 20.0% |
| !! | TTATACATAAGCACTTATAT+TGG | - | chr5_1:6543562-6543581 | None:intergenic | 20.0% |
| !! | TCAAATAATCAAATCTAAAC+AGG | + | chr5_1:6543721-6543740 | Msa0713970:intron | 20.0% |
| !! | ATCTATAGTGAAAAAATTCT+TGG | - | chr5_1:6544112-6544131 | None:intergenic | 20.0% |
| !!! | GTGTGAAAATTTAAAATAAG+AGG | - | chr5_1:6544196-6544215 | None:intergenic | 20.0% |
| !!! | ATTTCATTCACTGTTTTTTA+CGG | + | chr5_1:6544310-6544329 | Msa0713970:intron | 20.0% |
| !! | ATTAAATACAAAATTAAGGC+GGG | - | chr5_1:6544530-6544549 | None:intergenic | 20.0% |
| !!! | CGTAAAATTTTATCTACATA+AGG | + | chr5_1:6544733-6544752 | Msa0713970:CDS | 20.0% |
| !! | CACAAAGAATAGATTATTAT+TGG | + | chr5_1:6545592-6545611 | Msa0713970:CDS | 20.0% |
| !! | AAACATGTTAAATACATGTA+TGG | - | chr5_1:6546105-6546124 | None:intergenic | 20.0% |
| !! | CTGTTTAAAAACTAGTTATT+AGG | + | chr5_1:6547315-6547334 | Msa0713970:three_prime_UTR | 20.0% |
| ! | TTGATATCAAAGAAACACAA+AGG | - | chr5_1:6542049-6542068 | None:intergenic | 25.0% |
| !! | AAACAATATCTGTGTTTTCT+AGG | + | chr5_1:6542080-6542099 | Msa0713970:five_prime_UTR | 25.0% |
| ! | ATGCTTTATGTCTACAAAAT+AGG | + | chr5_1:6542396-6542415 | Msa0713970:intron | 25.0% |
| !!! | AAACAAAAGACAGCATTTTT+TGG | - | chr5_1:6542440-6542459 | None:intergenic | 25.0% |
| !!! | CATAATTTTAATAGAGAGTG+GGG | + | chr5_1:6542634-6542653 | Msa0713970:five_prime_UTR | 25.0% |
| ! | AGATCAAAGTAGAAGATAAA+AGG | - | chr5_1:6542985-6543004 | None:intergenic | 25.0% |
| !! | TTTTCTGTTTTATCCAAACT+TGG | + | chr5_1:6543024-6543043 | Msa0713970:five_prime_UTR | 25.0% |
| !!! | TTTTGGAGCTTTTTTCTTTT+TGG | + | chr5_1:6543082-6543101 | Msa0713970:five_prime_UTR | 25.0% |
| ! | AAGATGAAGTTTATGAAACT+TGG | + | chr5_1:6543107-6543126 | Msa0713970:exon | 25.0% |
| !! | AAAATGATGGAGATAATGTT+AGG | + | chr5_1:6543150-6543169 | Msa0713970:CDS | 25.0% |
| ! | GGAAATAAGAAAACAACTTA+TGG | + | chr5_1:6543670-6543689 | Msa0713970:intron | 25.0% |
| ! | AAGAAGATATATCTGAACTA+TGG | - | chr5_1:6543818-6543837 | None:intergenic | 25.0% |
| ! | GATAAATCTGAAAAGAAAGA+TGG | - | chr5_1:6544069-6544088 | None:intergenic | 25.0% |
| !! | GGAAAGGAAAATTATTTTCA+AGG | - | chr5_1:6544091-6544110 | None:intergenic | 25.0% |
| ! | TAGTGAAAAAATTCTTGGAA+AGG | - | chr5_1:6544107-6544126 | None:intergenic | 25.0% |
| ! | TAGTACATAACACATATTGA+TGG | - | chr5_1:6544282-6544301 | None:intergenic | 25.0% |
| ! | ATTGTTCGTAAATATGCAAA+AGG | - | chr5_1:6544423-6544442 | None:intergenic | 25.0% |
| ! | CATTCAAAATTAATGTGAAG+TGG | + | chr5_1:6544647-6544666 | Msa0713970:intron | 25.0% |
| !! | ATTACAAAAGGTGTATTCTT+TGG | - | chr5_1:6544792-6544811 | None:intergenic | 25.0% |
| ! | TTATTATTGGAGACTATTGT+CGG | + | chr5_1:6545605-6545624 | Msa0713970:CDS | 25.0% |
| ! | AACCTTTAAATACATGTCAA+TGG | - | chr5_1:6546071-6546090 | None:intergenic | 25.0% |
| ! | TGATTATAGTACAACAAAAC+CGG | - | chr5_1:6547000-6547019 | None:intergenic | 25.0% |
| !!! | TAACTAATTTTGACCTATGA+TGG | + | chr5_1:6547227-6547246 | Msa0713970:three_prime_UTR | 25.0% |
| !!! | TCTATTTTTACAACCATCAT+AGG | - | chr5_1:6547243-6547262 | None:intergenic | 25.0% |
| ! | ATTGTTGCAATTTATTTGCA+GGG | + | chr5_1:6547264-6547283 | Msa0713970:three_prime_UTR | 25.0% |
| AAAGGGAAAAAGGAAAAGTT+AGG | + | chr5_1:6541752-6541771 | Msa0713970:five_prime_UTR | 30.0% | |
| AAGGGAAAAAGGAAAAGTTA+GGG | + | chr5_1:6541753-6541772 | Msa0713970:five_prime_UTR | 30.0% | |
| AAACTACATGAACCAATCAA+AGG | - | chr5_1:6541951-6541970 | None:intergenic | 30.0% | |
| TGAGTATGAGAAAAAAGAAG+AGG | - | chr5_1:6542016-6542035 | None:intergenic | 30.0% | |
| ! | AAGAAACACAAAGGTTTGTT+TGG | - | chr5_1:6542040-6542059 | None:intergenic | 30.0% |
| !! | CAGATATTGTTTCAGGTTTA+TGG | - | chr5_1:6542072-6542091 | None:intergenic | 30.0% |
| GAAAACACAGATATTGTTTC+AGG | - | chr5_1:6542079-6542098 | None:intergenic | 30.0% | |
| ! | TCACAAGTTGGAAAAATGAT+GGG | - | chr5_1:6542239-6542258 | None:intergenic | 30.0% |
| !!! | ACATAAAGCATCGTTTTTTG+TGG | - | chr5_1:6542387-6542406 | None:intergenic | 30.0% |
| CTTTATGTCTACAAAATAGG+TGG | + | chr5_1:6542399-6542418 | Msa0713970:intron | 30.0% | |
| !!! | AAATGCTGTCTTTTGTTTTC+AGG | + | chr5_1:6542442-6542461 | Msa0713970:intron | 30.0% |
| TGAATGTTGAGTATGGAATT+TGG | + | chr5_1:6542501-6542520 | Msa0713970:five_prime_UTR | 30.0% | |
| !!! | GTGTTTTGTTTGTTACTTTG+TGG | + | chr5_1:6542557-6542576 | Msa0713970:five_prime_UTR | 30.0% |
| !! | TTTGTTGTTGTTTCCAACAA+TGG | - | chr5_1:6542592-6542611 | None:intergenic | 30.0% |
| !!! | TTGGAGATAGTTTGTTTTGT+TGG | + | chr5_1:6542756-6542775 | Msa0713970:five_prime_UTR | 30.0% |
| ! | GAACATGTTGCTTACTAAAA+TGG | - | chr5_1:6542832-6542851 | None:intergenic | 30.0% |
| ! | AAATTTCATCTAACTAGCCT+TGG | + | chr5_1:6542913-6542932 | Msa0713970:five_prime_UTR | 30.0% |
| ! | GGTGATTTGAAAAGCTATTT+TGG | + | chr5_1:6543065-6543084 | Msa0713970:five_prime_UTR | 30.0% |
| !! | CCATCATTTTGAAAAGAATC+AGG | - | chr5_1:6543140-6543159 | None:intergenic | 30.0% |
| ! | CCTGATTCTTTTCAAAATGA+TGG | + | chr5_1:6543137-6543156 | Msa0713970:CDS | 30.0% |
| AACATATGATTCAAAGCAAG+AGG | - | chr5_1:6543190-6543209 | None:intergenic | 30.0% | |
| AAACATAAGAAACCAACCAA+TGG | - | chr5_1:6543261-6543280 | None:intergenic | 30.0% | |
| TATATGCTGAGGAACTAATT+AGG | - | chr5_1:6543410-6543429 | None:intergenic | 30.0% | |
| TAGCATTATCATATATGCTG+AGG | - | chr5_1:6543421-6543440 | None:intergenic | 30.0% | |
| ACATAAGCACTTATATTGGA+AGG | - | chr5_1:6543558-6543577 | None:intergenic | 30.0% | |
| ATTACGTAATCCTCAATTTG+AGG | - | chr5_1:6543748-6543767 | None:intergenic | 30.0% | |
| TATCCTTGACTGATAAAGAA+TGG | - | chr5_1:6543783-6543802 | None:intergenic | 30.0% | |
| TATATCTGAACTATGGAGAT+GGG | - | chr5_1:6543811-6543830 | None:intergenic | 30.0% | |
| ATATATCTGAACTATGGAGA+TGG | - | chr5_1:6543812-6543831 | None:intergenic | 30.0% | |
| GTGAGATAGAAATGTATCAT+TGG | - | chr5_1:6543848-6543867 | None:intergenic | 30.0% | |
| ! | TGTTAACTTTTGCTTCTTTC+TGG | - | chr5_1:6543922-6543941 | None:intergenic | 30.0% |
| ! | TTTAAATTTTCACACGACAG+TGG | + | chr5_1:6544201-6544220 | Msa0713970:intron | 30.0% |
| GTATGCTTTCATGTAAGATT+TGG | + | chr5_1:6544225-6544244 | Msa0713970:intron | 30.0% | |
| ! | ACAAGCAATAGTATGTTTTC+TGG | - | chr5_1:6544562-6544581 | None:intergenic | 30.0% |
| CATATATTTGTTCAGGTATG+TGG | + | chr5_1:6544670-6544689 | Msa0713970:intron | 30.0% | |
| ATGTGGTTTGATTATCCTTT+AGG | + | chr5_1:6544862-6544881 | Msa0713970:intron | 30.0% | |
| ATATGTGCAAAGTTCTGTTA+TGG | + | chr5_1:6545035-6545054 | Msa0713970:CDS | 30.0% | |
| AAGTATTTGATACCATCTTG+GGG | - | chr5_1:6545904-6545923 | None:intergenic | 30.0% | |
| ! | GAAGTATTTGATACCATCTT+GGG | - | chr5_1:6545905-6545924 | None:intergenic | 30.0% |
| AAATACTTCGAGCAAGATAA+AGG | + | chr5_1:6545916-6545935 | Msa0713970:CDS | 30.0% | |
| TGCCATTGACATGTATTTAA+AGG | + | chr5_1:6546066-6546085 | Msa0713970:CDS | 30.0% | |
| CATGTTAAATACATGTATGG+TGG | - | chr5_1:6546102-6546121 | None:intergenic | 30.0% | |
| ! | GAAAAGAATATGTAGGTTGA+TGG | + | chr5_1:6546225-6546244 | Msa0713970:CDS | 30.0% |
| !! | AAGACGTAAAAGTTCTGAAA+GGG | + | chr5_1:6546494-6546513 | Msa0713970:CDS | 30.0% |
| AGAATAACTTCTTGGACATA+AGG | - | chr5_1:6546642-6546661 | None:intergenic | 30.0% | |
| AAGCTTAGAGAATAACTTCT+TGG | - | chr5_1:6546650-6546669 | None:intergenic | 30.0% | |
| AGAAGTTATTCTCTAAGCTT+TGG | + | chr5_1:6546650-6546669 | Msa0713970:CDS | 30.0% | |
| GATTATAGTACAACAAAACC+GGG | - | chr5_1:6546999-6547018 | None:intergenic | 30.0% | |
| TGTTGTACTATAATCAGAGA+AGG | + | chr5_1:6547004-6547023 | Msa0713970:three_prime_UTR | 30.0% | |
| ACTAACTAGAATCAAATGCT+AGG | + | chr5_1:6547123-6547142 | Msa0713970:three_prime_UTR | 30.0% | |
| AAACCAATACAAACTACACT+AGG | - | chr5_1:6547157-6547176 | None:intergenic | 30.0% | |
| CATTGTTGCAATTTATTTGC+AGG | + | chr5_1:6547263-6547282 | Msa0713970:three_prime_UTR | 30.0% | |
| AGGGAAAAAGGAAAAGTTAG+GGG | + | chr5_1:6541754-6541773 | Msa0713970:five_prime_UTR | 35.0% | |
| ! | CATAAGTTGAGAGAGAAAGT+GGG | + | chr5_1:6541817-6541836 | Msa0713970:five_prime_UTR | 35.0% |
| !! | AAGTGGGAACATTCTGAAAT+TGG | + | chr5_1:6541833-6541852 | Msa0713970:five_prime_UTR | 35.0% |
| CAAAAGATGAGGCTTGAAAA+AGG | - | chr5_1:6541923-6541942 | None:intergenic | 35.0% | |
| ! | TCTTTTGCCATTCCTTTGAT+TGG | + | chr5_1:6541936-6541955 | Msa0713970:five_prime_UTR | 35.0% |
| ACATGAACCAATCAAAGGAA+TGG | - | chr5_1:6541946-6541965 | None:intergenic | 35.0% | |
| ! | GTCACAAGTTGGAAAAATGA+TGG | - | chr5_1:6542240-6542259 | None:intergenic | 35.0% |
| ! | TTTTCCAACTTGTGACCAAT+TGG | + | chr5_1:6542244-6542263 | Msa0713970:intron | 35.0% |
| TTTCCAACTTGTGACCAATT+GGG | + | chr5_1:6542245-6542264 | Msa0713970:intron | 35.0% | |
| !! | TGTTTTCAGGAGTTCAAAGA+AGG | + | chr5_1:6542455-6542474 | Msa0713970:intron | 35.0% |
| !! | GTTTTCAGGAGTTCAAAGAA+GGG | + | chr5_1:6542456-6542475 | Msa0713970:intron | 35.0% |
| TAGTGTGTGAATGTTGAGTA+TGG | + | chr5_1:6542494-6542513 | Msa0713970:five_prime_UTR | 35.0% | |
| !! | AATTTTAATAGAGAGTGGGG+CGG | + | chr5_1:6542637-6542656 | Msa0713970:five_prime_UTR | 35.0% |
| ATGAATGTGTTTGTGTGTGT+TGG | + | chr5_1:6542737-6542756 | Msa0713970:five_prime_UTR | 35.0% | |
| TCTCCTAACATGGTTTATCT+TGG | + | chr5_1:6542784-6542803 | Msa0713970:five_prime_UTR | 35.0% | |
| CACAAACTCTTAACCAAGTT+TGG | - | chr5_1:6543040-6543059 | None:intergenic | 35.0% | |
| CAAACTTGGTTAAGAGTTTG+TGG | + | chr5_1:6543038-6543057 | Msa0713970:five_prime_UTR | 35.0% | |
| TGATTTCCTTCCAAATCCAT+TGG | + | chr5_1:6543242-6543261 | Msa0713970:intron | 35.0% | |
| ! | AAGAAACCAACCAATGGATT+TGG | - | chr5_1:6543255-6543274 | None:intergenic | 35.0% |
| GTTCCATTCTTTATCAGTCA+AGG | + | chr5_1:6543777-6543796 | Msa0713970:intron | 35.0% | |
| !! | AACTTTTGCTTCTTTCTGGT+TGG | - | chr5_1:6543918-6543937 | None:intergenic | 35.0% |
| GCAAAAGTTAACATTGTCAC+AGG | + | chr5_1:6543929-6543948 | Msa0713970:intron | 35.0% | |
| AAGAAAGATGGAACACTATG+TGG | - | chr5_1:6544057-6544076 | None:intergenic | 35.0% | |
| TCCAAAATCAAACTAGTTGG+TGG | + | chr5_1:6544334-6544353 | Msa0713970:intron | 35.0% | |
| !! | ACCACCAACTAGTTTGATTT+TGG | - | chr5_1:6544338-6544357 | None:intergenic | 35.0% |
| CACAAAACCAAATATGGCTA+TGG | - | chr5_1:6544393-6544412 | None:intergenic | 35.0% | |
| CAAATATGCGTTTCAGCAAT+TGG | + | chr5_1:6544476-6544495 | Msa0713970:intron | 35.0% | |
| ATTGCTTGTCATACTGTAGT+AGG | + | chr5_1:6544573-6544592 | Msa0713970:intron | 35.0% | |
| GAAGTGGCATATATTTGTTC+AGG | + | chr5_1:6544663-6544682 | Msa0713970:intron | 35.0% | |
| TCTGACATAGTCGTTAATGT+TGG | + | chr5_1:6544707-6544726 | Msa0713970:CDS | 35.0% | |
| CTGACATAGTCGTTAATGTT+GGG | + | chr5_1:6544708-6544727 | Msa0713970:CDS | 35.0% | |
| TGACATAGTCGTTAATGTTG+GGG | + | chr5_1:6544709-6544728 | Msa0713970:CDS | 35.0% | |
| AGCAGATATTGATCAGGTAA+AGG | - | chr5_1:6544900-6544919 | None:intergenic | 35.0% | |
| ! | CGTAAACTTTTGGACAAAAG+TGG | - | chr5_1:6544930-6544949 | None:intergenic | 35.0% |
| ! | CTTTTGCAAGCGTAAACTTT+TGG | - | chr5_1:6544940-6544959 | None:intergenic | 35.0% |
| ! | GTTAGTTTCAAACACAGATG+AGG | + | chr5_1:6544959-6544978 | Msa0713970:CDS | 35.0% |
| GCACATATTTCAAAAGCAAC+AGG | - | chr5_1:6545023-6545042 | None:intergenic | 35.0% | |
| TGCAAAGTTCTGTTATGGTA+TGG | + | chr5_1:6545040-6545059 | Msa0713970:CDS | 35.0% | |
| ATGTACGAGACCATTGAAAA+GGG | + | chr5_1:6545122-6545141 | Msa0713970:CDS | 35.0% | |
| ! | GATGAGATTTCCCTTTTCAA+TGG | - | chr5_1:6545135-6545154 | None:intergenic | 35.0% |
| AGTGGTCATACACATATAAC+AGG | + | chr5_1:6545324-6545343 | Msa0713970:CDS | 35.0% | |
| GAAACAACTAATGGTTCCAA+AGG | + | chr5_1:6545397-6545416 | Msa0713970:CDS | 35.0% | |
| AACTAATGGTTCCAAAGGAT+TGG | + | chr5_1:6545402-6545421 | Msa0713970:CDS | 35.0% | |
| ! | CATTGGTTGTAATAGTTGAC+AGG | - | chr5_1:6545475-6545494 | None:intergenic | 35.0% |
| CTGTCAACTATTACAACCAA+TGG | + | chr5_1:6545473-6545492 | Msa0713970:CDS | 35.0% | |
| ACAACCAATGGAAATGTTTC+CGG | + | chr5_1:6545485-6545504 | Msa0713970:CDS | 35.0% | |
| ATAACACCCTTATTGAAACC+AGG | - | chr5_1:6545557-6545576 | None:intergenic | 35.0% | |
| ATTGAAAGTGGCTATTCAAC+TGG | + | chr5_1:6545679-6545698 | Msa0713970:CDS | 35.0% | |
| ! | CGAAGTATTTGATACCATCT+TGG | - | chr5_1:6545906-6545925 | None:intergenic | 35.0% |
| ATGTTCACAAAACTGAGAAG+AGG | - | chr5_1:6545995-6546014 | None:intergenic | 35.0% | |
| AGGAAAGCTTGATACCAAAT+CGG | - | chr5_1:6546020-6546039 | None:intergenic | 35.0% | |
| ACTTCAACCGAACTGAATTT+CGG | + | chr5_1:6546148-6546167 | Msa0713970:intron | 35.0% | |
| CTCACACTATTATGTTATGC+AGG | + | chr5_1:6546174-6546193 | Msa0713970:intron | 35.0% | |
| GTGAGAGGAAAAGAATATGT+AGG | + | chr5_1:6546218-6546237 | Msa0713970:CDS | 35.0% | |
| !! | GAAGACGTAAAAGTTCTGAA+AGG | + | chr5_1:6546493-6546512 | Msa0713970:CDS | 35.0% |
| !! | AGACGTAAAAGTTCTGAAAG+GGG | + | chr5_1:6546495-6546514 | Msa0713970:CDS | 35.0% |
| AGAAACAGCAACAACAATGA+CGG | + | chr5_1:6546565-6546584 | Msa0713970:CDS | 35.0% | |
| GTAGCTGCTAACAAAATGAA+AGG | + | chr5_1:6546613-6546632 | Msa0713970:CDS | 35.0% | |
| TGGTCGAGCAAAGAAAAAAA+CGG | + | chr5_1:6546670-6546689 | Msa0713970:CDS | 35.0% | |
| ACGATTATACAACGATGCAA+CGG | - | chr5_1:6546828-6546847 | None:intergenic | 35.0% | |
| TGTATAATCGTCGATCACTT+TGG | + | chr5_1:6546837-6546856 | Msa0713970:three_prime_UTR | 35.0% | |
| ! | TTGCCTAGTGTAGTTTGTAT+TGG | + | chr5_1:6547151-6547170 | Msa0713970:three_prime_UTR | 35.0% |
| GGGAAAAAGGAAAAGTTAGG+GGG | + | chr5_1:6541755-6541774 | Msa0713970:five_prime_UTR | 40.0% | |
| AAAAAGGAAAAGTTAGGGGG+TGG | + | chr5_1:6541758-6541777 | Msa0713970:five_prime_UTR | 40.0% | |
| CCACTTTCTCTCTCAACTTA+TGG | - | chr5_1:6541819-6541838 | None:intergenic | 40.0% | |
| ! | CCATAAGTTGAGAGAGAAAG+TGG | + | chr5_1:6541816-6541835 | Msa0713970:five_prime_UTR | 40.0% |
| !! | GGGAACATTCTGAAATTGGT+TGG | + | chr5_1:6541837-6541856 | Msa0713970:five_prime_UTR | 40.0% |
| CAAAGGAATGGCAAAAGATG+AGG | - | chr5_1:6541934-6541953 | None:intergenic | 40.0% | |
| GACACGTTATACACTACCAT+TGG | - | chr5_1:6542348-6542367 | None:intergenic | 40.0% | |
| CAAAACACACACACACTTTC+TGG | - | chr5_1:6542545-6542564 | None:intergenic | 40.0% | |
| GTGGTGTCTAAATCCATTGT+TGG | + | chr5_1:6542576-6542595 | Msa0713970:five_prime_UTR | 40.0% | |
| ! | TGGTGTCAGATAGAACTAGT+GGG | + | chr5_1:6542660-6542679 | Msa0713970:five_prime_UTR | 40.0% |
| !! | GTTGGTAATGTCTCCTAACA+TGG | + | chr5_1:6542774-6542793 | Msa0713970:five_prime_UTR | 40.0% |
| CTAACATGGTTTATCTTGGC+CGG | + | chr5_1:6542788-6542807 | Msa0713970:five_prime_UTR | 40.0% | |
| GTAACAAAGTCCAAAGAGAC+CGG | - | chr5_1:6542810-6542829 | None:intergenic | 40.0% | |
| !! | ATCTAACTAGCCTTGGTTTG+TGG | + | chr5_1:6542920-6542939 | Msa0713970:five_prime_UTR | 40.0% |
| !! | TCTAACTAGCCTTGGTTTGT+GGG | + | chr5_1:6542921-6542940 | Msa0713970:five_prime_UTR | 40.0% |
| !! | CTTGGTTTGTGGGAAAGATT+CGG | + | chr5_1:6542931-6542950 | Msa0713970:five_prime_UTR | 40.0% |
| TGGTTAAGAGTTTGTGGAGT+AGG | + | chr5_1:6543044-6543063 | Msa0713970:five_prime_UTR | 40.0% | |
| TTCCTTCCAAATCCATTGGT+TGG | + | chr5_1:6543246-6543265 | Msa0713970:intron | 40.0% | |
| ! | AACCAACCAATGGATTTGGA+AGG | - | chr5_1:6543251-6543270 | None:intergenic | 40.0% |
| ACTGCTTTCATAAGCAATCC+TGG | + | chr5_1:6543638-6543657 | Msa0713970:intron | 40.0% | |
| CTAAACAGGTCCTCAAATTG+AGG | + | chr5_1:6543735-6543754 | Msa0713970:intron | 40.0% | |
| TGTTGGAGTTAAGGGAGAAT+AGG | - | chr5_1:6543873-6543892 | None:intergenic | 40.0% | |
| GAAGCTCTTGTTGGAGTTAA+GGG | - | chr5_1:6543881-6543900 | None:intergenic | 40.0% | |
| AGTTGCATCTCTGACAAGTT+CGG | + | chr5_1:6543956-6543975 | Msa0713970:intron | 40.0% | |
| TGTAGATGCTGAGTTACAGT+TGG | + | chr5_1:6544023-6544042 | Msa0713970:intron | 40.0% | |
| GGCTCCAAAATCAAACTAGT+TGG | + | chr5_1:6544331-6544350 | Msa0713970:intron | 40.0% | |
| !! | ACACTCTGAAGTTTGGTTCA+GGG | - | chr5_1:6544368-6544387 | None:intergenic | 40.0% |
| !! | TATGGTCACACTCTGAAGTT+TGG | - | chr5_1:6544375-6544394 | None:intergenic | 40.0% |
| AGTGTGACCATAGCCATATT+TGG | + | chr5_1:6544383-6544402 | Msa0713970:intron | 40.0% | |
| GCAGGACACAAAACCAAATA+TGG | - | chr5_1:6544399-6544418 | None:intergenic | 40.0% | |
| ! | CGTAAATATGCAAAAGGTGC+AGG | - | chr5_1:6544417-6544436 | None:intergenic | 40.0% |
| GCTCGCTACATAAGTTTATG+TGG | + | chr5_1:6544845-6544864 | Msa0713970:intron | 40.0% | |
| AGGTTCAATAAGCAGCCTAA+AGG | - | chr5_1:6544880-6544899 | None:intergenic | 40.0% | |
| AACTGCAGCAGATATTGATC+AGG | - | chr5_1:6544906-6544925 | None:intergenic | 40.0% | |
| GATGTACGAGACCATTGAAA+AGG | + | chr5_1:6545121-6545140 | Msa0713970:CDS | 40.0% | |
| CAACCAAATCACTTCTTCCA+TGG | + | chr5_1:6545225-6545244 | Msa0713970:CDS | 40.0% | |
| CAAATCACTTCTTCCATGGT+CGG | + | chr5_1:6545229-6545248 | Msa0713970:CDS | 40.0% | |
| TAGCTATGGACTCGATACAA+TGG | - | chr5_1:6545274-6545293 | None:intergenic | 40.0% | |
| TAACAGGAAAAAGCTCCCAT+CGG | + | chr5_1:6545340-6545359 | Msa0713970:CDS | 40.0% | |
| AAAAAGCTCCCATCGGAAAA+TGG | + | chr5_1:6545347-6545366 | Msa0713970:CDS | 40.0% | |
| AAAAGCTCCCATCGGAAAAT+GGG | + | chr5_1:6545348-6545367 | Msa0713970:CDS | 40.0% | |
| TAATGGTTCCAAAGGATTGG+TGG | + | chr5_1:6545405-6545424 | Msa0713970:CDS | 40.0% | |
| ! | AATGGTTCCAAAGGATTGGT+GGG | + | chr5_1:6545406-6545425 | Msa0713970:CDS | 40.0% |
| CTCGCTTATAGAGATCAAGT+TGG | - | chr5_1:6545451-6545470 | None:intergenic | 40.0% | |
| CAACCAATGGAAATGTTTCC+GGG | + | chr5_1:6545486-6545505 | Msa0713970:CDS | 40.0% | |
| AACCAATGGAAATGTTTCCG+GGG | + | chr5_1:6545487-6545506 | Msa0713970:CDS | 40.0% | |
| AAGGTTGCCTGGTTTCAATA+AGG | + | chr5_1:6545547-6545566 | Msa0713970:CDS | 40.0% | |
| AGGTTGCCTGGTTTCAATAA+GGG | + | chr5_1:6545548-6545567 | Msa0713970:CDS | 40.0% | |
| !! | AATAAGGGTGTTATCCAGAG+TGG | + | chr5_1:6545563-6545582 | Msa0713970:CDS | 40.0% |
| TCTTTGTGATATCACCACTC+TGG | - | chr5_1:6545580-6545599 | None:intergenic | 40.0% | |
| !! | GACTATTGTCGGTTTATTGC+CGG | + | chr5_1:6545616-6545635 | Msa0713970:CDS | 40.0% |
| GGTTTATTGCCGGTAGATAT+GGG | + | chr5_1:6545626-6545645 | Msa0713970:CDS | 40.0% | |
| CTCGCTGAAGTTATTGAAAG+TGG | + | chr5_1:6545667-6545686 | Msa0713970:CDS | 40.0% | |
| TCAACTGGATTGTGAAGTGT+CGG | + | chr5_1:6545694-6545713 | Msa0713970:CDS | 40.0% | |
| AAACTGAGAAGAGGCAGATT+AGG | - | chr5_1:6545986-6546005 | None:intergenic | 40.0% | |
| !! | TTTTGTGAACATCGCCGATT+TGG | + | chr5_1:6546003-6546022 | Msa0713970:CDS | 40.0% |
| TTTCCTAGACAGTCTCATGA+CGG | + | chr5_1:6546034-6546053 | Msa0713970:CDS | 40.0% | |
| TTCAGTTCGGTTGAAGTCAT+TGG | - | chr5_1:6546145-6546164 | None:intergenic | 40.0% | |
| TGAGTCTCCGAAATTCAGTT+CGG | - | chr5_1:6546158-6546177 | None:intergenic | 40.0% | |
| TATGTTATGCAGGAACATCC+TGG | + | chr5_1:6546184-6546203 | Msa0713970:intron | 40.0% | |
| GCTTCAACAACATCATCATC+AGG | + | chr5_1:6546349-6546368 | Msa0713970:CDS | 40.0% | |
| TCAACAACATCATCATCAGG+AGG | + | chr5_1:6546352-6546371 | Msa0713970:CDS | 40.0% | |
| GCTGCACTAAAACTATCAAG+TGG | + | chr5_1:6546523-6546542 | Msa0713970:CDS | 40.0% | |
| GCACTAAAACTATCAAGTGG+AGG | + | chr5_1:6546526-6546545 | Msa0713970:CDS | 40.0% | |
| AATCTACGCCATCTAGAAGT+AGG | + | chr5_1:6546752-6546771 | Msa0713970:CDS | 40.0% | |
| GAATGTCTCCTACTTCTAGA+TGG | - | chr5_1:6546763-6546782 | None:intergenic | 40.0% | |
| ! | TCGATCACTTTGGTAGCATT+AGG | + | chr5_1:6546847-6546866 | Msa0713970:three_prime_UTR | 40.0% |
| TGAGGTATGATGGTTGTTTG+TGG | + | chr5_1:6546917-6546936 | Msa0713970:three_prime_UTR | 40.0% | |
| CACTTAAGATGAGCCTATGA+GGG | + | chr5_1:6546972-6546991 | Msa0713970:three_prime_UTR | 40.0% | |
| !! | TTGCACACCACTGTTTTGTT+AGG | + | chr5_1:6547190-6547209 | Msa0713970:three_prime_UTR | 40.0% |
| CGCTTAACCTAACAAAACAG+TGG | - | chr5_1:6547200-6547219 | None:intergenic | 40.0% | |
| TGTGTTTGTGTAGCTAGCTG+TGG | + | chr5_1:6541865-6541884 | Msa0713970:five_prime_UTR | 45.0% | |
| GTGGCTGTCATCAAAAGATG+AGG | + | chr5_1:6541887-6541906 | Msa0713970:five_prime_UTR | 45.0% | |
| CAACCCAATTGGTCACAAGT+TGG | - | chr5_1:6542251-6542270 | None:intergenic | 45.0% | |
| CAACTTGTGACCAATTGGGT+TGG | + | chr5_1:6542249-6542268 | Msa0713970:intron | 45.0% | |
| CGCATTGAAACCAACCCAAT+TGG | - | chr5_1:6542262-6542281 | None:intergenic | 45.0% | |
| AGGAGTTCAAAGAAGGGACA+TGG | + | chr5_1:6542462-6542481 | Msa0713970:intron | 45.0% | |
| ! | GTGGTGTCAGATAGAACTAG+TGG | + | chr5_1:6542659-6542678 | Msa0713970:five_prime_UTR | 45.0% |
| GGTGTCAGATAGAACTAGTG+GGG | + | chr5_1:6542661-6542680 | Msa0713970:five_prime_UTR | 45.0% | |
| GTGTCAGATAGAACTAGTGG+GGG | + | chr5_1:6542662-6542681 | Msa0713970:five_prime_UTR | 45.0% | |
| CGGCCAAGATAAACCATGTT+AGG | - | chr5_1:6542790-6542809 | None:intergenic | 45.0% | |
| TTTATCTTGGCCGGTCTCTT+TGG | + | chr5_1:6542797-6542816 | Msa0713970:five_prime_UTR | 45.0% | |
| CGAATCTTTCCCACAAACCA+AGG | - | chr5_1:6542933-6542952 | None:intergenic | 45.0% | |
| ! | GGGAAAGATTCGGTCATACA+AGG | + | chr5_1:6542941-6542960 | Msa0713970:five_prime_UTR | 45.0% |
| CTTATTTCCAGAAGCTCTCC+AGG | - | chr5_1:6543659-6543678 | None:intergenic | 45.0% | |
| GGAAGCTCTTGTTGGAGTTA+AGG | - | chr5_1:6543882-6543901 | None:intergenic | 45.0% | |
| AGTGAGATGGAAGCTCTTGT+TGG | - | chr5_1:6543890-6543909 | None:intergenic | 45.0% | |
| ACAAGAGCTTCCATCTCACT+AGG | + | chr5_1:6543890-6543909 | Msa0713970:intron | 45.0% | |
| CAAGAGCTTCCATCTCACTA+GGG | + | chr5_1:6543891-6543910 | Msa0713970:intron | 45.0% | |
| !! | CACACTCTGAAGTTTGGTTC+AGG | - | chr5_1:6544369-6544388 | None:intergenic | 45.0% |
| ATTCACATCCACGACATTCC+TGG | + | chr5_1:6544993-6545012 | Msa0713970:CDS | 45.0% | |
| ! | TCCTCAACTCCAGCATTTTC+AGG | + | chr5_1:6545171-6545190 | Msa0713970:CDS | 45.0% |
| TCCTGAAAATGCTGGAGTTG+AGG | - | chr5_1:6545175-6545194 | None:intergenic | 45.0% | |
| TTTCCAGCTCCTGAAAATGC+TGG | - | chr5_1:6545183-6545202 | None:intergenic | 45.0% | |
| CGACCATGGAAGAAGTGATT+TGG | - | chr5_1:6545231-6545250 | None:intergenic | 45.0% | |
| ATCTTAAGTTCCTCCGACCA+TGG | - | chr5_1:6545245-6545264 | None:intergenic | 45.0% | |
| TATCGAGTCCATAGCTACCA+AGG | + | chr5_1:6545277-6545296 | Msa0713970:CDS | 45.0% | |
| ! | CTTCGTTCCCATTTTCCGAT+GGG | - | chr5_1:6545358-6545377 | None:intergenic | 45.0% |
| AAAATGGGAACGAAGCACAC+TGG | + | chr5_1:6545363-6545382 | Msa0713970:CDS | 45.0% | |
| CGGTGTGAGGAAACAACTAA+TGG | + | chr5_1:6545388-6545407 | Msa0713970:CDS | 45.0% | |
| TAAGTGCGTACACCTCTAGA+AGG | + | chr5_1:6545528-6545547 | Msa0713970:CDS | 45.0% | |
| CGGTTTATTGCCGGTAGATA+TGG | + | chr5_1:6545625-6545644 | Msa0713970:CDS | 45.0% | |
| !!! | CTTTTGATTTGTGCGTCAGC+TGG | + | chr5_1:6545776-6545795 | Msa0713970:CDS | 45.0% |
| ACACGAGCATCAATCTTCGA+TGG | + | chr5_1:6545853-6545872 | Msa0713970:CDS | 45.0% | |
| TTCGATGGAAGACGAATTGC+AGG | + | chr5_1:6545868-6545887 | Msa0713970:CDS | 45.0% | |
| !!! | CTCTCACTTTTGCTGATTCC+AGG | - | chr5_1:6546205-6546224 | None:intergenic | 45.0% |
| CTGGAATCAGCAAAAGTGAG+AGG | + | chr5_1:6546203-6546222 | Msa0713970:CDS | 45.0% | |
| !! | TATGTAGGTTGATGGACTGC+AGG | + | chr5_1:6546233-6546252 | Msa0713970:CDS | 45.0% |
| ! | TCCTTTACGTGTCGTTGTAC+AGG | + | chr5_1:6546303-6546322 | Msa0713970:CDS | 45.0% |
| ACCTGTACAACGACACGTAA+AGG | - | chr5_1:6546307-6546326 | None:intergenic | 45.0% | |
| GACCAACACAGAAGAGGAAT+GGG | + | chr5_1:6546453-6546472 | Msa0713970:CDS | 45.0% | |
| ATCCCATTCCTCTTCTGTGT+TGG | - | chr5_1:6546458-6546477 | None:intergenic | 45.0% | |
| !! | TGCTGTTTCTGTCACTACTC+TGG | - | chr5_1:6546555-6546574 | None:intergenic | 45.0% |
| AACAGCAACAACAATGACGG+TGG | + | chr5_1:6546568-6546587 | Msa0713970:CDS | 45.0% | |
| ! | AACAATGACGGTGGTGGTAT+AGG | + | chr5_1:6546577-6546596 | Msa0713970:CDS | 45.0% |
| AACAGTAGAAGCAGGGCTTT+CGG | - | chr5_1:6546719-6546738 | None:intergenic | 45.0% | |
| CCTCAACAACAGTAGAAGCA+GGG | - | chr5_1:6546726-6546745 | None:intergenic | 45.0% | |
| TCCTCAACAACAGTAGAAGC+AGG | - | chr5_1:6546727-6546746 | None:intergenic | 45.0% | |
| CCTCATAGGCTCATCTTAAG+TGG | - | chr5_1:6546974-6546993 | None:intergenic | 45.0% | |
| CCACTTAAGATGAGCCTATG+AGG | + | chr5_1:6546971-6546990 | Msa0713970:three_prime_UTR | 45.0% | |
| AAGGAAAAGTTAGGGGGTGG+TGG | + | chr5_1:6541761-6541780 | Msa0713970:five_prime_UTR | 50.0% | |
| AGGAAAAGTTAGGGGGTGGT+GGG | + | chr5_1:6541762-6541781 | Msa0713970:five_prime_UTR | 50.0% | |
| GTTTGTGTAGCTAGCTGTGG+TGG | + | chr5_1:6541868-6541887 | Msa0713970:five_prime_UTR | 50.0% | |
| TTTAATAGAGAGTGGGGCGG+TGG | + | chr5_1:6542640-6542659 | Msa0713970:five_prime_UTR | 50.0% | |
| AAGCAATCCTGGAGAGCTTC+TGG | + | chr5_1:6543649-6543668 | Msa0713970:intron | 50.0% | |
| TCAAAAGCAACAGGTCCTCC+AGG | - | chr5_1:6545014-6545033 | None:intergenic | 50.0% | |
| !! | ACTCCAGCATTTTCAGGAGC+TGG | + | chr5_1:6545177-6545196 | Msa0713970:CDS | 50.0% |
| ATCACTTCTTCCATGGTCGG+AGG | + | chr5_1:6545232-6545251 | Msa0713970:CDS | 50.0% | |
| ! | CATCGAAGCCTTGGTAGCTA+TGG | - | chr5_1:6545288-6545307 | None:intergenic | 50.0% |
| CATAGCTACCAAGGCTTCGA+TGG | + | chr5_1:6545286-6545305 | Msa0713970:CDS | 50.0% | |
| TTCGATGGATCCATCCAAGG+TGG | + | chr5_1:6545301-6545320 | Msa0713970:CDS | 50.0% | |
| TATGACCACTCCACCTTGGA+TGG | - | chr5_1:6545314-6545333 | None:intergenic | 50.0% | |
| TGTGTATGACCACTCCACCT+TGG | - | chr5_1:6545318-6545337 | None:intergenic | 50.0% | |
| ! | GCTTCGTTCCCATTTTCCGA+TGG | - | chr5_1:6545359-6545378 | None:intergenic | 50.0% |
| TCTTCCACCCACCAATCCTT+TGG | - | chr5_1:6545416-6545435 | None:intergenic | 50.0% | |
| TGCCCCGGAAACATTTCCAT+TGG | - | chr5_1:6545492-6545511 | None:intergenic | 50.0% | |
| AATGTTTCCGGGGCAGTTGT+CGG | + | chr5_1:6545497-6545516 | Msa0713970:CDS | 50.0% | |
| ! | TACACCTCTAGAAGGTTGCC+TGG | + | chr5_1:6545536-6545555 | Msa0713970:CDS | 50.0% |
| GAAACCAGGCAACCTTCTAG+AGG | - | chr5_1:6545543-6545562 | None:intergenic | 50.0% | |
| TTGCCGGTAGATATGGGAAG+TGG | + | chr5_1:6545632-6545651 | Msa0713970:CDS | 50.0% | |
| GAGCCACTTCCCATATCTAC+CGG | - | chr5_1:6545638-6545657 | None:intergenic | 50.0% | |
| GATATGGGAAGTGGCTCATG+CGG | + | chr5_1:6545641-6545660 | Msa0713970:CDS | 50.0% | |
| GATCACGTGCAATCTCAGCA+AGG | - | chr5_1:6545964-6545983 | None:intergenic | 50.0% | |
| AGACCGTCATGAGACTGTCT+AGG | - | chr5_1:6546040-6546059 | None:intergenic | 50.0% | |
| TGCATGCAGTGCAGAATGAG+CGG | + | chr5_1:6546278-6546297 | Msa0713970:CDS | 50.0% | |
| TGATCTTCCCGGTTCCATCA+GGG | + | chr5_1:6546387-6546406 | Msa0713970:CDS | 50.0% | |
| ATGCAATGCCCTGATGGAAC+CGG | - | chr5_1:6546398-6546417 | None:intergenic | 50.0% | |
| TGAACTACCGTGAGAACCAC+CGG | - | chr5_1:6546422-6546441 | None:intergenic | 50.0% | |
| GTGGTTCTCACGGTAGTTCA+AGG | + | chr5_1:6546422-6546441 | Msa0713970:CDS | 50.0% | |
| TACCACGACCAACACAGAAG+AGG | + | chr5_1:6546447-6546466 | Msa0713970:CDS | 50.0% | |
| ! | TTCCTCTTCTGTGTTGGTCG+TGG | - | chr5_1:6546452-6546471 | None:intergenic | 50.0% |
| CGACCAACACAGAAGAGGAA+TGG | + | chr5_1:6546452-6546471 | Msa0713970:CDS | 50.0% | |
| AGAAGAGGAATGGGATGCTG+TGG | + | chr5_1:6546462-6546481 | Msa0713970:CDS | 50.0% | |
| AGCAACAACAATGACGGTGG+TGG | + | chr5_1:6546571-6546590 | Msa0713970:CDS | 50.0% | |
| CCCTGCTTCTACTGTTGTTG+AGG | + | chr5_1:6546723-6546742 | Msa0713970:CDS | 50.0% | |
| ! | CTTCTAGCTGAGACTGACTG+TGG | + | chr5_1:6546892-6546911 | Msa0713970:three_prime_UTR | 50.0% |
| GACTGTGGCTTGAGGTATGA+TGG | + | chr5_1:6546907-6546926 | Msa0713970:three_prime_UTR | 50.0% | |
| AACAAAACCGGGTCCCTCAT+AGG | - | chr5_1:6546988-6547007 | None:intergenic | 50.0% | |
| GGAAAAGTTAGGGGGTGGTG+GGG | + | chr5_1:6541763-6541782 | Msa0713970:five_prime_UTR | 55.0% | |
| ! | GAAAAGTTAGGGGGTGGTGG+GGG | + | chr5_1:6541764-6541783 | Msa0713970:five_prime_UTR | 55.0% |
| CTGGTTGGACCCTAGTGAGA+TGG | - | chr5_1:6543903-6543922 | None:intergenic | 55.0% | |
| CAGGTATGTGGCAACTGAGC+TGG | + | chr5_1:6544682-6544701 | Msa0713970:intron | 55.0% | |
| CACATCCACGACATTCCTGG+AGG | + | chr5_1:6544996-6545015 | Msa0713970:CDS | 55.0% | |
| GGATGGATCCATCGAAGCCT+TGG | - | chr5_1:6545297-6545316 | None:intergenic | 55.0% | |
| GGCTTCGATGGATCCATCCA+AGG | + | chr5_1:6545298-6545317 | Msa0713970:CDS | 55.0% | |
| TGGATCCATCCAAGGTGGAG+TGG | + | chr5_1:6545306-6545325 | Msa0713970:CDS | 55.0% | |
| GGGAACGAAGCACACTGGAA+CGG | + | chr5_1:6545368-6545387 | Msa0713970:CDS | 55.0% | |
| AAGCACACTGGAACGGTGTG+AGG | + | chr5_1:6545375-6545394 | Msa0713970:CDS | 55.0% | |
| ! | GGTTCCAAAGGATTGGTGGG+TGG | + | chr5_1:6545409-6545428 | Msa0713970:CDS | 55.0% |
| CGGTGAGATCCGAACTGATG+CGG | + | chr5_1:6545714-6545733 | Msa0713970:CDS | 55.0% | |
| TGAGATCCGAACTGATGCGG+AGG | + | chr5_1:6545717-6545736 | Msa0713970:CDS | 55.0% | |
| TCCGAACTGATGCGGAGGAT+AGG | + | chr5_1:6545722-6545741 | Msa0713970:CDS | 55.0% | |
| GCCTATCCTCCGCATCAGTT+CGG | - | chr5_1:6545726-6545745 | None:intergenic | 55.0% | |
| GGAGATCAGAAGCCCCAAGA+TGG | + | chr5_1:6545889-6545908 | Msa0713970:CDS | 55.0% | |
| ACGAGCACTCCTGATCTTCC+CGG | + | chr5_1:6546376-6546395 | Msa0713970:CDS | 55.0% | |
| CTGATGGAACCGGGAAGATC+AGG | - | chr5_1:6546388-6546407 | None:intergenic | 55.0% | |
| CTGATCTTCCCGGTTCCATC+AGG | + | chr5_1:6546386-6546405 | Msa0713970:CDS | 55.0% | |
| TGCAATGCCCTGATGGAACC+GGG | - | chr5_1:6546397-6546416 | None:intergenic | 55.0% | |
| !! | TCCATCAGGGCATTGCATCC+CGG | + | chr5_1:6546400-6546419 | Msa0713970:CDS | 55.0% |
| TTGCATCCCGGTGGTTCTCA+CGG | + | chr5_1:6546412-6546431 | Msa0713970:CDS | 55.0% | |
| GAACTACCGTGAGAACCACC+GGG | - | chr5_1:6546421-6546440 | None:intergenic | 55.0% | |
| GCTTTCGGACGTATCAGAGC+TGG | - | chr5_1:6546704-6546723 | None:intergenic | 55.0% | |
| CTGAGACTGACTGTGGCTTG+AGG | + | chr5_1:6546899-6546918 | Msa0713970:three_prime_UTR | 55.0% | |
| AGATGAGCCTATGAGGGACC+CGG | + | chr5_1:6546978-6546997 | Msa0713970:three_prime_UTR | 55.0% | |
| CAGGTCCTCCAGGAATGTCG+TGG | - | chr5_1:6545004-6545023 | None:intergenic | 60.0% | |
| AGTTGCAGCTCGCTGTGCAG+CGG | + | chr5_1:6545088-6545107 | Msa0713970:CDS | 60.0% | |
| AGCTTCTCCGACAACTGCCC+CGG | - | chr5_1:6545507-6545526 | None:intergenic | 60.0% | |
| TGATGCGGAGGATAGGCCAG+AGG | + | chr5_1:6545729-6545748 | Msa0713970:CDS | 60.0% | |
| GAGGATAGGCCAGAGGCTTG+AGG | + | chr5_1:6545736-6545755 | Msa0713970:CDS | 60.0% | |
| GATAGGCCAGAGGCTTGAGG+AGG | + | chr5_1:6545739-6545758 | Msa0713970:CDS | 60.0% | |
| CCAGAGGCTTGAGGAGGCTA+CGG | + | chr5_1:6545745-6545764 | Msa0713970:CDS | 60.0% | |
| ACCGGGATGCAATGCCCTGA+TGG | - | chr5_1:6546404-6546423 | None:intergenic | 60.0% | |
| !! | ATCAGGGCATTGCATCCCGG+TGG | + | chr5_1:6546403-6546422 | Msa0713970:CDS | 60.0% |
| CCGTAGCCTCCTCAAGCCTC+TGG | - | chr5_1:6545748-6545767 | None:intergenic | 65.0% | |
| GAGGCTTGAGGAGGCTACGG+TGG | + | chr5_1:6545748-6545767 | Msa0713970:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 6541749 | 6547353 | 6541749 | ID=Msa0713970;Name=Msa0713970 |
| chr5_1 | mRNA | 6541749 | 6547353 | 6541749 | ID=Msa0713970-mRNA-1;Parent=Msa0713970;Name=Msa0713970-mRNA-1;_AED=0.02;_eAED=0.02;_QI=999|1|1|1|0.75|0.6|5|561|630 |
| chr5_1 | exon | 6541749 | 6542101 | 6541749 | ID=Msa0713970-mRNA-1:exon:2716;Parent=Msa0713970-mRNA-1 |
| chr5_1 | exon | 6542464 | 6543171 | 6542464 | ID=Msa0713970-mRNA-1:exon:2717;Parent=Msa0713970-mRNA-1 |
| chr5_1 | exon | 6544685 | 6544754 | 6544685 | ID=Msa0713970-mRNA-1:exon:2718;Parent=Msa0713970-mRNA-1 |
| chr5_1 | exon | 6544924 | 6546087 | 6544924 | ID=Msa0713970-mRNA-1:exon:2719;Parent=Msa0713970-mRNA-1 |
| chr5_1 | exon | 6546196 | 6547353 | 6546196 | ID=Msa0713970-mRNA-1:exon:2720;Parent=Msa0713970-mRNA-1 |
| chr5_1 | five_prime_UTR | 6541749 | 6542101 | 6541749 | ID=Msa0713970-mRNA-1:five_prime_utr;Parent=Msa0713970-mRNA-1 |
| chr5_1 | five_prime_UTR | 6542464 | 6543109 | 6542464 | ID=Msa0713970-mRNA-1:five_prime_utr;Parent=Msa0713970-mRNA-1 |
| chr5_1 | CDS | 6543110 | 6543171 | 6543110 | ID=Msa0713970-mRNA-1:cds;Parent=Msa0713970-mRNA-1 |
| chr5_1 | CDS | 6544685 | 6544754 | 6544685 | ID=Msa0713970-mRNA-1:cds;Parent=Msa0713970-mRNA-1 |
| chr5_1 | CDS | 6544924 | 6546087 | 6544924 | ID=Msa0713970-mRNA-1:cds;Parent=Msa0713970-mRNA-1 |
| chr5_1 | CDS | 6546196 | 6546792 | 6546196 | ID=Msa0713970-mRNA-1:cds;Parent=Msa0713970-mRNA-1 |
| chr5_1 | three_prime_UTR | 6546793 | 6547353 | 6546793 | ID=Msa0713970-mRNA-1:three_prime_utr;Parent=Msa0713970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
