AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0724590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0724590 MtrunA17_Chr5g0415871 95.630 389 11 2 1 386 1 386 0.0 751
Msa0724590 MtrunA17_Chr3g0130621 30.145 345 208 11 54 385 20 344 3.06e-39 145
Msa0724590 MtrunA17_Chr3g0130621 30.481 374 218 12 19 376 36 383 5.65e-36 136
Msa0724590 MtrunA17_Chr3g0130621 35.379 277 161 8 14 280 84 352 4.40e-35 134
Msa0724590 MtrunA17_Chr3g0130621 35.683 227 138 6 16 241 138 357 3.27e-33 129
Msa0724590 MtrunA17_Chr5g0442001 32.454 379 212 14 31 383 290 650 3.74e-37 143
Msa0724590 MtrunA17_Chr5g0442001 29.448 163 111 2 18 180 500 658 2.00e-15 78.2
Msa0724590 MtrunA17_Chr3g0094741 32.620 374 207 15 37 383 306 661 1.40e-36 141
Msa0724590 MtrunA17_Chr3g0094741 30.104 289 180 6 19 287 340 626 4.35e-27 113
Msa0724590 MtrunA17_Chr3g0094741 29.878 164 110 3 18 180 510 669 2.95e-15 77.8
Msa0724590 MtrunA17_Chr8g0362061 31.750 400 217 14 19 380 244 625 3.99e-36 140
Msa0724590 MtrunA17_Chr8g0362061 29.412 153 106 2 18 169 477 628 1.59e-13 72.4
Msa0724590 MtrunA17_Chr8g0384631 32.794 247 152 6 16 255 68 307 7.84e-35 132
Msa0724590 MtrunA17_Chr8g0384631 31.321 265 166 7 25 280 25 282 9.41e-27 109
Msa0724590 MtrunA17_Chr8g0384631 27.852 298 184 11 76 360 25 304 3.45e-24 102
Msa0724590 MtrunA17_Chr8g0384631 28.980 245 146 7 129 361 25 253 3.39e-23 99.8
Msa0724590 MtrunA17_Chr3g0109811 28.496 379 198 11 19 383 325 644 1.25e-30 124
Msa0724590 MtrunA17_Chr3g0109811 26.797 153 109 2 18 169 494 644 4.08e-12 68.2
Msa0724590 MtrunA17_Chr3g0109811 26.829 328 175 11 70 384 267 542 7.39e-12 67.4
Msa0724590 MtrunA17_Chr1g0202151 27.177 379 204 9 19 383 300 620 5.28e-30 122
Msa0724590 MtrunA17_Chr1g0202151 24.806 258 166 8 145 384 270 517 4.60e-12 67.8
Msa0724590 MtrunA17_Chr1g0202151 28.049 164 113 3 18 180 469 628 1.14e-11 66.6
Msa0724590 MtrunA17_Chr7g0244411 30.239 377 188 14 19 380 285 601 5.31e-30 122
Msa0724590 MtrunA17_Chr7g0244411 30.000 150 101 3 15 162 450 597 3.24e-12 68.6
Msa0724590 MtrunA17_Chr6g0463421 27.604 384 196 10 19 383 297 617 9.16e-29 118
Msa0724590 MtrunA17_Chr6g0463421 27.485 171 105 6 18 180 466 625 3.46e-11 65.1
Msa0724590 MtrunA17_Chr1g0167471 27.431 401 230 16 19 383 242 617 4.84e-28 116
Msa0724590 MtrunA17_Chr1g0167471 26.368 201 137 5 1 195 449 644 3.36e-12 68.2
Msa0724590 MtrunA17_Chr6g0457381 28.070 399 233 14 21 385 7 385 1.30e-25 107
Msa0724590 MtrunA17_Chr6g0457381 26.946 334 206 12 70 385 5 318 1.46e-23 101
Msa0724590 MtrunA17_Chr6g0457381 30.901 233 142 5 18 241 109 331 1.97e-23 100
Msa0724590 MtrunA17_Chr6g0457381 34.302 172 92 4 19 171 216 385 9.92e-18 84.3
Msa0724590 MtrunA17_Chr4g0013271 29.661 354 207 11 51 380 68 403 2.00e-25 108
Msa0724590 MtrunA17_Chr4g0013271 28.231 294 183 10 16 287 84 371 9.65e-20 91.7
Msa0724590 MtrunA17_Chr4g0013271 31.176 170 108 4 18 185 255 417 4.42e-15 77.4
Msa0724590 MtrunA17_Chr2g0317861 27.954 347 218 11 19 346 131 464 1.72e-23 101
Msa0724590 MtrunA17_Chr7g0239601 34.286 175 103 4 103 270 38 207 4.82e-22 93.2
Msa0724590 MtrunA17_Chr7g0239601 31.098 164 109 2 51 214 39 198 6.43e-16 76.3
Msa0724590 MtrunA17_Chr7g0239601 31.677 161 88 5 213 361 39 189 4.15e-14 70.9
Msa0724590 MtrunA17_Chr7g0239601 34.000 150 96 3 21 169 60 207 3.70e-13 68.2
Msa0724590 MtrunA17_Chr7g0233601 28.875 329 203 12 19 329 121 436 1.15e-21 96.3
Msa0724590 MtrunA17_Chr7g0233601 28.526 312 158 14 69 337 47 336 1.26e-12 68.9
Msa0724590 MtrunA17_Chr7g0233601 36.420 162 94 4 16 169 278 438 1.74e-11 65.5
Msa0724590 MtrunA17_Chr7g0253611 26.786 280 178 8 19 277 155 428 1.79e-21 96.7
Msa0724590 MtrunA17_Chr7g0253611 29.694 229 137 9 69 280 154 375 2.95e-16 80.9
Msa0724590 MtrunA17_Chr7g0253611 25.969 258 168 5 19 270 266 506 2.31e-14 75.1
Msa0724590 MtrunA17_Chr3g0130871 29.614 233 144 7 18 238 49 273 9.96e-19 86.3
Msa0724590 MtrunA17_Chr3g0130871 26.837 313 187 9 38 316 18 322 8.49e-16 77.8
Msa0724590 MtrunA17_Chr3g0130871 26.282 312 181 10 104 383 31 325 9.57e-15 74.7
Msa0724590 MtrunA17_Chr3g0142381 25.600 375 227 14 39 384 49 400 2.19e-18 87.0
Msa0724590 MtrunA17_Chr3g0142381 28.750 160 97 5 19 170 250 400 5.09e-11 64.3
Msa0724590 MtrunA17_Chr7g0220131 26.016 369 215 14 19 344 23 376 5.60e-17 82.4
Msa0724590 MtrunA17_Chr7g0220131 27.869 305 179 10 63 339 16 307 2.74e-16 80.1
Msa0724590 MtrunA17_Chr7g0220131 27.887 355 197 14 27 344 136 468 2.32e-14 74.3
Msa0724590 MtrunA17_Chr3g0123301 24.934 377 238 14 19 361 167 532 7.97e-17 82.0
Msa0724590 MtrunA17_Chr3g0123301 26.462 359 220 12 57 385 154 498 1.65e-14 75.1
Msa0724590 MtrunA17_Chr5g0404371 25.503 447 218 21 1 360 1 419 6.75e-13 69.7
Msa0724590 MtrunA17_Chr3g0112381 36.190 105 62 3 19 120 59 161 1.16e-12 65.5
Msa0724590 MtrunA17_Chr3g0112381 33.071 127 67 4 243 361 24 140 6.38e-12 63.5
Msa0724590 MtrunA17_Chr3g0112381 33.103 145 90 5 29 169 17 158 1.11e-11 62.8
Msa0724590 MtrunA17_Chr3g0140201 26.840 231 134 9 13 213 122 347 1.25e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0724590 AT1G27060.1 60.825 388 134 6 4 385 2 377 1.62e-154 441
Msa0724590 AT5G63860.1 29.315 365 224 11 35 385 1 345 2.40e-40 148
Msa0724590 AT5G63860.1 31.092 357 212 11 19 359 36 374 7.85e-37 139
Msa0724590 AT5G63860.1 33.333 276 169 6 14 280 84 353 5.27e-33 128
Msa0724590 AT5G63860.1 32.547 212 131 5 19 229 193 393 2.26e-28 115
Msa0724590 AT5G19420.1 32.796 372 207 12 37 383 299 652 2.31e-39 150
Msa0724590 AT5G19420.1 27.273 286 188 5 20 287 334 617 1.65e-25 109
Msa0724590 AT5G19420.1 30.822 146 99 2 18 162 501 645 2.60e-14 75.5
Msa0724590 AT5G19420.2 33.065 372 206 13 37 383 333 686 2.50e-39 150
Msa0724590 AT5G19420.2 27.273 286 188 5 20 287 368 651 1.74e-25 109
Msa0724590 AT5G19420.2 30.822 146 99 2 18 162 535 679 2.65e-14 75.5
Msa0724590 AT5G12350.1 33.602 372 204 14 37 383 295 648 2.76e-39 150
Msa0724590 AT5G12350.1 27.972 286 186 5 20 287 330 613 4.02e-26 111
Msa0724590 AT5G12350.1 31.973 147 96 3 18 162 497 641 5.42e-15 77.4
Msa0724590 AT5G19420.3 33.065 372 206 13 37 383 299 652 3.06e-39 149
Msa0724590 AT5G19420.3 27.240 279 183 5 20 280 334 610 2.05e-25 108
Msa0724590 AT5G19420.3 30.822 146 99 2 18 162 501 645 3.91e-14 74.7
Msa0724590 AT5G42140.2 30.789 380 189 12 19 383 298 618 3.32e-33 132
Msa0724590 AT5G42140.2 28.049 164 113 3 18 180 467 626 1.29e-11 67.0
Msa0724590 AT5G42140.2 24.561 285 167 12 127 384 252 515 4.57e-11 65.1
Msa0724590 AT5G42140.1 30.789 380 189 12 19 383 298 618 3.32e-33 132
Msa0724590 AT5G42140.1 28.049 164 113 3 18 180 467 626 1.29e-11 67.0
Msa0724590 AT5G42140.1 24.561 285 167 12 127 384 252 515 4.57e-11 65.1
Msa0724590 AT4G14368.1 31.202 391 225 15 19 383 238 610 3.92e-31 125
Msa0724590 AT4G14368.1 31.544 149 100 2 15 162 456 603 2.52e-13 72.4
Msa0724590 AT4G14368.3 31.202 391 225 15 19 383 231 603 3.93e-31 125
Msa0724590 AT4G14368.3 28.723 188 131 3 15 200 449 635 2.67e-13 72.0
Msa0724590 AT4G14368.2 31.202 391 225 15 19 383 236 608 4.24e-31 125
Msa0724590 AT4G14368.2 28.723 188 131 3 15 200 454 640 2.80e-13 72.0
Msa0724590 AT4G14368.4 31.202 391 225 15 19 383 238 610 4.24e-31 125
Msa0724590 AT4G14368.4 28.723 188 131 3 15 200 456 642 2.85e-13 72.0
Msa0724590 AT3G23270.1 31.202 391 225 14 19 383 219 591 9.78e-31 124
Msa0724590 AT3G23270.1 28.191 188 132 3 15 200 437 623 1.90e-13 72.8
Msa0724590 AT3G23270.2 31.202 391 225 14 19 383 223 595 1.11e-30 124
Msa0724590 AT3G23270.2 28.191 188 132 3 15 200 441 627 2.16e-13 72.4
Msa0724590 AT5G08710.1 27.621 391 240 11 22 383 54 430 1.79e-29 118
Msa0724590 AT5G08710.1 29.231 325 152 9 127 384 55 368 2.25e-16 80.9
Msa0724590 AT5G08710.1 32.035 231 139 7 19 238 155 378 1.60e-14 75.1
Msa0724590 AT1G65920.2 31.026 390 218 17 22 383 218 584 3.35e-29 120
Msa0724590 AT1G65920.2 24.779 226 101 5 18 178 369 590 4.12e-11 65.5
Msa0724590 AT1G65920.1 31.026 390 218 17 22 383 264 630 4.04e-29 120
Msa0724590 AT1G65920.1 24.779 226 101 5 18 178 415 636 4.57e-11 65.1
Msa0724590 AT1G69710.1 30.729 384 186 13 19 383 321 643 2.43e-28 117
Msa0724590 AT1G69710.1 27.485 171 120 3 1 169 475 643 1.68e-12 69.7
Msa0724590 AT1G69710.2 30.729 384 186 13 19 383 308 630 2.54e-28 117
Msa0724590 AT1G69710.2 27.485 171 120 3 1 169 462 630 1.75e-12 69.7
Msa0724590 AT5G16040.1 29.944 354 209 12 15 348 3 337 4.81e-28 114
Msa0724590 AT5G16040.1 29.204 339 203 13 64 385 1 319 5.34e-26 108
Msa0724590 AT5G16040.1 30.994 171 100 3 19 171 217 387 1.65e-16 80.9
Msa0724590 AT3G47660.7 28.993 407 222 19 19 386 113 491 4.98e-28 116
Msa0724590 AT3G47660.7 27.839 273 185 5 18 280 174 444 7.95e-24 103
Msa0724590 AT3G47660.7 28.824 170 109 5 18 185 340 499 3.10e-13 72.0
Msa0724590 AT3G47660.3 28.993 407 222 19 19 386 255 633 5.57e-28 116
Msa0724590 AT3G47660.3 27.839 273 185 5 18 280 316 586 7.69e-24 104
Msa0724590 AT3G47660.3 28.824 170 109 5 18 185 482 641 2.30e-13 72.4
Msa0724590 AT3G47660.5 28.993 407 222 19 19 386 255 633 5.57e-28 116
Msa0724590 AT3G47660.5 27.839 273 185 5 18 280 316 586 7.69e-24 104
Msa0724590 AT3G47660.5 28.824 170 109 5 18 185 482 641 2.30e-13 72.4
Msa0724590 AT3G47660.2 28.993 407 222 19 19 386 258 636 5.68e-28 116
Msa0724590 AT3G47660.2 27.839 273 185 5 18 280 319 589 8.29e-24 103
Msa0724590 AT3G47660.2 28.824 170 109 5 18 185 485 644 2.33e-13 72.4
Msa0724590 AT3G47660.6 28.993 407 222 19 19 386 180 558 7.15e-28 116
Msa0724590 AT3G47660.6 27.839 273 185 5 18 280 241 511 1.05e-23 103
Msa0724590 AT3G47660.6 28.824 170 109 5 18 185 407 566 3.75e-13 71.6
Msa0724590 AT3G47660.1 28.993 407 222 19 19 386 258 636 7.37e-28 116
Msa0724590 AT3G47660.1 27.839 273 185 5 18 280 319 589 8.85e-24 103
Msa0724590 AT3G47660.1 28.824 170 109 5 18 185 485 644 2.24e-13 72.4
Msa0724590 AT3G47660.4 28.993 407 222 19 19 386 294 672 9.81e-28 115
Msa0724590 AT3G47660.4 27.839 273 185 5 18 280 355 625 1.26e-23 103
Msa0724590 AT3G47660.4 28.824 170 109 5 18 185 521 680 3.43e-13 71.6
Msa0724590 AT1G76950.1 28.889 360 211 14 51 383 283 624 1.66e-27 115
Msa0724590 AT1G76950.1 28.144 167 109 4 18 180 473 632 1.77e-12 69.7
Msa0724590 AT3G02510.1 28.701 331 203 12 70 385 7 319 4.09e-27 111
Msa0724590 AT3G02510.1 30.603 232 143 5 18 241 111 332 2.76e-25 106
Msa0724590 AT3G02510.1 28.448 348 210 12 21 348 9 337 5.47e-25 105
Msa0724590 AT3G02510.1 31.818 176 102 5 14 171 212 387 8.32e-15 75.9
Msa0724590 AT3G02510.3 30.603 232 143 5 18 241 53 274 1.41e-25 106
Msa0724590 AT3G02510.3 28.777 278 166 11 123 385 1 261 6.02e-20 90.5
Msa0724590 AT3G02510.3 26.923 286 175 11 19 283 1 273 5.76e-19 87.4
Msa0724590 AT3G02510.3 27.517 298 178 11 70 348 1 279 2.00e-16 80.1
Msa0724590 AT3G02510.3 31.818 176 102 5 14 171 154 329 5.78e-15 75.9
Msa0724590 AT3G02510.2 28.013 307 191 11 70 361 7 298 4.12e-24 101
Msa0724590 AT3G02510.2 27.703 296 185 9 21 299 9 292 1.15e-20 92.0
Msa0724590 AT3G02510.2 28.502 207 130 5 18 216 111 307 1.23e-17 83.2
Msa0724590 AT5G16040.2 28.704 324 199 12 64 370 1 309 5.89e-24 101
Msa0724590 AT5G16040.2 29.139 302 185 9 15 299 3 292 2.98e-22 97.1
Msa0724590 AT5G16040.2 27.854 219 140 6 18 228 111 319 8.64e-17 81.3
Msa0724590 AT3G53830.3 28.571 308 172 9 3 270 168 467 3.65e-23 101
Msa0724590 AT3G53830.3 25.899 417 237 16 18 383 72 467 1.05e-18 87.8
Msa0724590 AT3G53830.4 28.571 308 172 9 3 270 196 495 3.88e-23 101
Msa0724590 AT3G53830.4 28.671 286 150 10 125 369 214 486 1.61e-18 87.4
Msa0724590 AT5G08710.2 28.826 281 182 6 22 287 54 331 2.82e-22 97.1
Msa0724590 AT5G08710.2 33.068 251 142 8 127 360 55 296 1.94e-19 89.0
Msa0724590 AT3G03790.3 26.804 291 190 7 6 277 142 428 7.21e-22 98.2
Msa0724590 AT3G03790.3 31.579 304 171 12 19 299 207 496 3.94e-18 87.0
Msa0724590 AT3G03790.3 29.758 289 160 12 69 333 154 423 3.09e-16 81.3
Msa0724590 AT3G03790.2 26.804 291 190 7 6 277 142 428 7.57e-22 98.2
Msa0724590 AT3G03790.2 31.579 304 171 12 19 299 207 496 3.45e-18 87.0
Msa0724590 AT3G03790.2 29.758 289 160 12 69 333 154 423 3.16e-16 81.3
Msa0724590 AT3G55580.1 29.851 268 143 9 40 270 224 483 7.77e-22 97.4
Msa0724590 AT3G55580.1 28.159 277 149 10 145 386 225 486 1.57e-18 87.4
Msa0724590 AT3G03790.1 26.761 284 185 7 13 277 146 425 9.35e-22 98.2
Msa0724590 AT3G03790.1 31.579 304 171 12 19 299 204 493 3.51e-18 87.0
Msa0724590 AT3G03790.1 29.766 299 167 12 59 333 141 420 3.42e-17 84.3
Msa0724590 AT3G15430.6 26.503 366 230 15 18 361 130 478 6.20e-21 94.7
Msa0724590 AT3G15430.6 26.531 294 186 11 106 385 115 392 1.02e-13 72.8
Msa0724590 AT3G15430.4 26.503 366 230 15 18 361 130 478 6.20e-21 94.7
Msa0724590 AT3G15430.4 26.531 294 186 11 106 385 115 392 1.02e-13 72.8
Msa0724590 AT3G15430.2 26.503 366 230 15 18 361 130 478 6.20e-21 94.7
Msa0724590 AT3G15430.2 26.531 294 186 11 106 385 115 392 1.02e-13 72.8
Msa0724590 AT3G15430.3 26.503 366 230 15 18 361 130 478 6.20e-21 94.7
Msa0724590 AT3G15430.3 26.531 294 186 11 106 385 115 392 1.02e-13 72.8
Msa0724590 AT3G15430.5 26.503 366 230 15 18 361 130 478 6.20e-21 94.7
Msa0724590 AT3G15430.5 26.531 294 186 11 106 385 115 392 1.02e-13 72.8
Msa0724590 AT3G15430.1 26.503 366 230 15 18 361 130 478 6.20e-21 94.7
Msa0724590 AT3G15430.1 26.531 294 186 11 106 385 115 392 1.02e-13 72.8
Msa0724590 AT1G19880.1 26.100 341 198 12 56 361 65 386 2.32e-19 90.1
Msa0724590 AT1G19880.1 29.375 160 96 5 19 170 256 406 1.88e-11 65.9
Msa0724590 AT5G48330.2 25.899 417 228 14 7 359 32 431 9.14e-19 88.2
Msa0724590 AT5G48330.1 25.837 418 228 14 7 359 32 432 1.32e-18 87.4
Msa0724590 AT5G60870.4 29.874 318 164 10 69 346 49 347 1.47e-18 87.0
Msa0724590 AT5G60870.4 26.389 360 188 14 18 329 49 379 1.81e-15 77.8
Msa0724590 AT5G60870.1 26.716 408 218 16 18 373 49 427 1.71e-18 87.0
Msa0724590 AT5G60870.1 26.190 336 205 14 19 329 121 438 1.45e-15 78.2
Msa0724590 AT5G60870.1 32.515 163 101 4 16 170 280 441 1.07e-14 75.9
Msa0724590 AT5G60870.1 27.513 189 123 5 45 226 259 440 3.45e-13 71.2
Msa0724590 AT3G53830.1 28.571 259 144 7 3 228 168 418 6.06e-18 85.5
Msa0724590 AT3G53830.2 28.571 259 144 7 3 228 196 446 6.44e-18 85.5
Msa0724590 AT5G60870.2 26.265 415 218 16 18 373 49 434 1.25e-17 84.7
Msa0724590 AT5G60870.2 25.948 343 204 15 19 329 121 445 3.45e-14 74.3
Msa0724590 AT5G60870.2 31.765 170 100 5 16 170 280 448 2.68e-13 71.6
Msa0724590 AT3G26100.5 26.110 383 234 14 15 361 160 529 6.19e-16 79.7
Msa0724590 AT3G26100.5 27.049 366 219 14 52 385 146 495 7.36e-16 79.7
Msa0724590 AT3G26100.6 26.110 383 234 14 15 361 160 529 6.19e-16 79.7
Msa0724590 AT3G26100.6 27.049 366 219 14 52 385 146 495 7.36e-16 79.7
Msa0724590 AT3G26100.2 26.110 383 234 14 15 361 160 529 6.19e-16 79.7
Msa0724590 AT3G26100.2 27.049 366 219 14 52 385 146 495 7.36e-16 79.7
Msa0724590 AT3G26100.3 26.110 383 234 14 15 361 60 429 6.64e-16 79.3
Msa0724590 AT3G26100.3 27.049 366 219 14 52 385 46 395 1.32e-15 78.6
Msa0724590 AT3G26100.4 26.110 383 234 14 15 361 60 429 6.64e-16 79.3
Msa0724590 AT3G26100.4 27.049 366 219 14 52 385 46 395 1.32e-15 78.6
Msa0724590 AT3G26100.1 26.110 383 234 14 15 361 60 429 6.64e-16 79.3
Msa0724590 AT3G26100.1 27.049 366 219 14 52 385 46 395 1.32e-15 78.6
Msa0724590 AT3G02300.1 26.923 364 218 14 19 344 22 375 1.14e-15 79.0
Msa0724590 AT3G02300.1 31.429 175 95 5 15 174 139 303 2.05e-15 78.2
Msa0724590 AT3G02300.1 25.649 308 188 8 59 337 11 306 6.67e-15 76.6
Msa0724590 AT3G02300.2 26.923 364 218 14 19 344 33 386 1.55e-15 78.6
Msa0724590 AT3G02300.2 31.429 175 95 5 15 174 150 314 2.27e-15 77.8
Msa0724590 AT3G02300.2 25.649 308 188 8 59 337 22 317 8.75e-15 76.3
Msa0724590 AT5G60870.3 29.412 221 143 6 23 236 8 222 1.85e-15 76.3
Msa0724590 AT5G60870.3 32.515 163 101 4 16 170 111 272 2.21e-15 76.3
Msa0724590 AT5G60870.3 27.513 189 123 5 45 226 90 271 7.80e-14 71.6
Msa0724590 AT5G11580.1 26.225 408 220 20 19 359 37 430 5.50e-14 73.9
Msa0724590 AT5G11580.1 27.100 369 171 13 51 376 18 331 2.04e-11 65.9

Find 158 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGATTGGGGAGAATTTA+TGG 0.140106 5_1:+23245302 None:intergenic
ACTCCATAAAGATACATTTA+TGG 0.164985 5_1:-23244932 Msa0724590:three_prime_UTR
TGTCTTTCAAATCAAGTTTA+TGG 0.192149 5_1:-23246481 Msa0724590:CDS
CACAAATTTGGTGATTTATC+TGG 0.209412 5_1:+23245233 None:intergenic
ATGGAGAGCTGCATTATTTA+TGG 0.211881 5_1:-23245058 Msa0724590:three_prime_UTR
TCAGCTGGTTGGGGCCATTC+AGG 0.219919 5_1:-23247258 Msa0724590:CDS
GAAGCCAGTTTCACAAATTC+TGG 0.242462 5_1:-23244889 Msa0724590:three_prime_UTR
TCAAATCAAGTTTATGGATT+TGG 0.242600 5_1:-23246475 Msa0724590:CDS
TATCTGGATGTACTGGCTTT+GGG 0.245082 5_1:+23245249 None:intergenic
AGTCCATAAATGTATCTTTA+TGG 0.250640 5_1:+23244929 None:intergenic
GACATCTGTTATTAGAATTT+CGG 0.258778 5_1:+23244988 None:intergenic
AAGCAAAAGGCTCTCTGATA+TGG 0.273357 5_1:-23245102 Msa0724590:three_prime_UTR
TCAAATCCACTAGTAACTTT+AGG 0.281051 5_1:+23246394 None:intergenic
TTTGAGTTCAGTCTTGTTCT+TGG 0.282589 5_1:+23248839 None:intergenic
ATACATTTATGGACTATTAT+AGG 0.290735 5_1:-23244921 Msa0724590:three_prime_UTR
AAGAATCAGAAGAAAGAGTA+TGG 0.295429 5_1:-23248654 Msa0724590:CDS
GACGCCGCACCACACAAATT+TGG 0.300790 5_1:+23245221 None:intergenic
TTATCTGGATGTACTGGCTT+TGG 0.313309 5_1:+23245248 None:intergenic
CAAACCAGAATTTGTGAAAC+TGG 0.317686 5_1:+23244885 None:intergenic
TAACCAAGATTTACAGTAAC+AGG 0.334861 5_1:+23245392 None:intergenic
GAGAAAGCCCCTGGCCTTGA+TGG 0.338139 5_1:-23245622 Msa0724590:CDS
TGCTCTTAACATAACTTGAT+TGG 0.339943 5_1:+23245289 None:intergenic
AGAAAGTGAAAGTAGATTGA+TGG 0.352687 5_1:-23248710 Msa0724590:exon
GCTCTTAACATAACTTGATT+GGG 0.353543 5_1:+23245290 None:intergenic
GATCATAGTGCTGCATTATC+TGG 0.362532 5_1:-23246337 Msa0724590:intron
ACTTGTGGGGATGGTTCCTT+TGG 0.367581 5_1:-23247095 Msa0724590:CDS
TTGAGTTCAGTCTTGTTCTT+GGG 0.373803 5_1:+23248840 None:intergenic
AACCAATGTCTCAGCTGGTT+GGG 0.381086 5_1:-23247268 Msa0724590:CDS
TGCCTGTTCACTTGTGGGGA+TGG 0.382815 5_1:-23247104 Msa0724590:CDS
GATGGTTCCTTTGGTCAACT+TGG 0.383105 5_1:-23247086 Msa0724590:CDS
TCATGGGGTAGGGGAAATTC+AGG 0.383551 5_1:-23247366 Msa0724590:CDS
TTTGAAGATGAGGAAATAGT+TGG 0.385379 5_1:-23246376 Msa0724590:CDS
GCTGGAACAGATGGTCAATT+AGG 0.391068 5_1:-23248622 Msa0724590:CDS
TCCAATGATGTTATAGCCTT+GGG 0.391517 5_1:+23247303 None:intergenic
AGTCCTGTTACTGTAAATCT+TGG 0.393349 5_1:-23245395 Msa0724590:CDS
TAGTCCCTCTGAGCTGGGAC+TGG 0.406790 5_1:-23245126 Msa0724590:three_prime_UTR
CAAGTTTATGGATTTGGCTC+TGG 0.409915 5_1:-23246469 Msa0724590:CDS
CTGGGTGCCTGTTCACTTGT+GGG 0.411326 5_1:-23247109 Msa0724590:CDS
AGAAGAAAGAGTATGGAGTT+GGG 0.412986 5_1:-23248647 Msa0724590:CDS
CTCTGGTAAGCGTGGTCAGT+TGG 0.416091 5_1:-23246452 Msa0724590:CDS
GTCCAATGATGTTATAGCCT+TGG 0.416419 5_1:+23247302 None:intergenic
GAGCATGGTCAACTAGGGTT+AGG 0.420516 5_1:-23245437 Msa0724590:CDS
GCATGAGAAGCAAAATTGTC+TGG 0.423406 5_1:+23245192 None:intergenic
AACAAAAGATGACACTTTGA+TGG 0.424790 5_1:+23247034 None:intergenic
TTGTTTGGTTTCTAGATACT+GGG 0.427216 5_1:-23247127 Msa0724590:intron
CACCTGGGGAAGAGGCTTCA+AGG 0.427359 5_1:-23246145 Msa0724590:CDS
AGTAGCAATATCAGTAATCT+TGG 0.427864 5_1:+23245597 None:intergenic
AACCATCCCCACAAGTGAAC+AGG 0.428266 5_1:+23247102 None:intergenic
TGTATAATTGTAAATTTAAG+TGG 0.428524 5_1:-23244827 Msa0724590:three_prime_UTR
GGTGATTTATCTGGATGTAC+TGG 0.430434 5_1:+23245242 None:intergenic
ATGGTTCCTTTGGTCAACTT+GGG 0.431277 5_1:-23247085 Msa0724590:CDS
CATTCTCTTGTCTTGTTGAA+AGG 0.435372 5_1:-23246975 Msa0724590:intron
TCCCAAGGCTATAACATCAT+TGG 0.442483 5_1:-23247304 Msa0724590:CDS
CAGAAGAAAGAGTATGGAGT+TGG 0.444973 5_1:-23248648 Msa0724590:CDS
GCCCTTGAAGCCTCTTCCCC+AGG 0.448907 5_1:+23246143 None:intergenic
AGCATGGTCAACTAGGGTTA+GGG 0.449489 5_1:-23245436 Msa0724590:CDS
AAGGTGTTATCATGGGGTAG+GGG 0.454279 5_1:-23247375 Msa0724590:CDS
ATCAGAGTTTATTGTGGAAG+TGG 0.455881 5_1:-23245347 Msa0724590:CDS
AGATTCAAGAGAAGCTAACT+TGG 0.456652 5_1:-23245644 Msa0724590:CDS
AGAGTATGGAGTTGGGGTGC+TGG 0.458775 5_1:-23248640 Msa0724590:CDS
ACAGATGGTCAATTAGGAAC+AGG 0.470662 5_1:-23248616 Msa0724590:CDS
TCACAAATTCTGGTTTGAGC+TGG 0.472633 5_1:-23244879 Msa0724590:three_prime_UTR
AAGATTACTGATATTGCTAC+TGG 0.474658 5_1:-23245595 Msa0724590:CDS
AGTCCCTCTGAGCTGGGACT+GGG 0.476128 5_1:-23245125 Msa0724590:three_prime_UTR
TACTCTAGTCCCTCTGAGCT+GGG 0.476636 5_1:-23245131 Msa0724590:three_prime_UTR
AGAAATAAAGACATGGGGAT+GGG 0.478219 5_1:-23245462 Msa0724590:CDS
AGACCGGCTAAGTCGTTATT+CGG 0.478608 5_1:-23245873 Msa0724590:intron
GTACTCTAGTCCCTCTGAGC+TGG 0.478678 5_1:-23245132 Msa0724590:three_prime_UTR
CATCTGTACACCTGGGGAAG+AGG 0.479854 5_1:-23246153 Msa0724590:CDS
GAAATAAAGACATGGGGATG+GGG 0.481351 5_1:-23245461 Msa0724590:CDS
ACATGGGGATGGGGCGAGCA+TGG 0.482441 5_1:-23245452 Msa0724590:CDS
ATCTGGATGTACTGGCTTTG+GGG 0.485003 5_1:+23245250 None:intergenic
TTACAGTAACAGGACTGATT+CGG 0.486307 5_1:+23245402 None:intergenic
TGGGGCGAGCATGGTCAACT+AGG 0.488900 5_1:-23245443 Msa0724590:CDS
CAACTAGGGTTAGGGGATGA+TGG 0.489094 5_1:-23245428 Msa0724590:CDS
CATGTCATCGCCTTAACCTC+TGG 0.489568 5_1:-23248514 Msa0724590:intron
CAGATGGGAAGGTGTTATCA+TGG 0.491788 5_1:-23247383 Msa0724590:CDS
ATAGTTGGAATTTCTGCAAA+CGG 0.492234 5_1:-23246361 Msa0724590:CDS
CTTCCCAGTCCCAGCTCAGA+GGG 0.496481 5_1:+23245122 None:intergenic
GCCCCAACCAGCTGAGACAT+TGG 0.498814 5_1:+23247266 None:intergenic
TCCTTTGGTCAACTTGGGCA+TGG 0.499608 5_1:-23247080 Msa0724590:CDS
CAAAACACGTACTCCGTACC+AGG 0.500093 5_1:+23248774 None:intergenic
AGCAAAAGGCTCTCTGATAT+GGG 0.502559 5_1:-23245101 Msa0724590:three_prime_UTR
ACTGGGTGCCTGTTCACTTG+TGG 0.503316 5_1:-23247110 Msa0724590:CDS
ATCTTGGTTCCATCAAGGCC+AGG 0.505192 5_1:+23245613 None:intergenic
GAAGGTGTTATCATGGGGTA+GGG 0.511908 5_1:-23247376 Msa0724590:CDS
AAATTTGTGTTTAGGTGAGG+GGG 0.512026 5_1:-23245952 Msa0724590:intron
AATCTTCCTAAAGTTACTAG+TGG 0.514256 5_1:-23246400 Msa0724590:CDS
GGAAGGTGTTATCATGGGGT+AGG 0.515585 5_1:-23247377 Msa0724590:CDS
ACCAATGTCTCAGCTGGTTG+GGG 0.515654 5_1:-23247267 Msa0724590:CDS
TTGATGGACATCTGTACACC+TGG 0.516546 5_1:-23246161 Msa0724590:CDS
AGCTGGGACTGGGAAGCAAA+AGG 0.519032 5_1:-23245115 Msa0724590:three_prime_UTR
AAATTTACTAAAGTCACTCT+AGG 0.522559 5_1:-23246078 Msa0724590:CDS
TTCATAACCAATGTCTCAGC+TGG 0.524111 5_1:-23247273 Msa0724590:CDS
GATGACATGAGCGCCGCCAC+AGG 0.526265 5_1:+23248528 None:intergenic
GCTAACTTGGAGAAAGCCCC+TGG 0.529070 5_1:-23245631 Msa0724590:CDS
TGATCTTCACAATGCAAGAC+CGG 0.533680 5_1:-23245889 Msa0724590:CDS
TAACCAATGTCTCAGCTGGT+TGG 0.533790 5_1:-23247269 Msa0724590:CDS
GTATAATTGTAAATTTAAGT+GGG 0.536537 5_1:-23244826 Msa0724590:three_prime_UTR
TGTTGATCAACATGTTGCAC+AGG 0.538380 5_1:-23247015 Msa0724590:CDS
TCTGGTAAGCGTGGTCAGTT+GGG 0.538387 5_1:-23246451 Msa0724590:CDS
TATGTACTAACCAGAGGTTA+AGG 0.540535 5_1:+23248504 None:intergenic
TTCTGGTTTGAGCTGGAACA+TGG 0.550013 5_1:-23244872 Msa0724590:three_prime_UTR
AACCATGCTTTAGCTATGAC+TGG 0.553502 5_1:-23246051 Msa0724590:intron
ACCTGGGGAAGAGGCTTCAA+GGG 0.555641 5_1:-23246144 Msa0724590:CDS
AGATGGGAAGGTGTTATCAT+GGG 0.556243 5_1:-23247382 Msa0724590:CDS
AACCTGAAACAAAACCTGAA+TGG 0.558395 5_1:+23247244 None:intergenic
CAGTAATCTTGGTTCCATCA+AGG 0.562937 5_1:+23245608 None:intergenic
TAAATTTGTGTTTAGGTGAG+GGG 0.563697 5_1:-23245953 Msa0724590:intron
CAATAACATGTTGTATCCCA+AGG 0.565536 5_1:-23247319 Msa0724590:CDS
TCTTGGTTCCATCAAGGCCA+GGG 0.567023 5_1:+23245614 None:intergenic
AGAGACAGAGACAGTTGTTG+AGG 0.569073 5_1:+23248571 None:intergenic
GAATGGAGAAATAAAGACAT+GGG 0.569308 5_1:-23245468 Msa0724590:CDS
AGGGGAAATTCAGGTCAACT+AGG 0.571789 5_1:-23247357 Msa0724590:CDS
GTCTCTTCACTTGCCTGTGG+CGG 0.578756 5_1:-23248541 Msa0724590:CDS
GGGGCGAGCATGGTCAACTA+GGG 0.579034 5_1:-23245442 Msa0724590:CDS
TACTAGTGGATTTGAAGATG+AGG 0.580190 5_1:-23246386 Msa0724590:CDS
AGTTGGGGTGCTGGAACAGA+TGG 0.581646 5_1:-23248631 Msa0724590:CDS
AATTCAGGTCAACTAGGCCA+TGG 0.582576 5_1:-23247351 Msa0724590:CDS
GGGGAGGTTTATATGCTTGG+GGG 0.583462 5_1:-23245933 Msa0724590:CDS
CTCTTAACATAACTTGATTG+GGG 0.584891 5_1:+23245291 None:intergenic
ACCATGCCCAAGTTGACCAA+AGG 0.586455 5_1:+23247079 None:intergenic
GTACCGAATAACGACTTAGC+CGG 0.592936 5_1:+23245870 None:intergenic
TAATTGTAAATTTAAGTGGG+TGG 0.595373 5_1:-23244823 None:intergenic
ACAGGCAAGTGAAGAGACAG+AGG 0.596212 5_1:+23248546 None:intergenic
ATCACCAAATTTGTGTGGTG+CGG 0.596540 5_1:-23245225 Msa0724590:three_prime_UTR
GAGAAATAAAGACATGGGGA+TGG 0.597217 5_1:-23245463 Msa0724590:CDS
GCTTCCCAGTCCCAGCTCAG+AGG 0.598283 5_1:+23245121 None:intergenic
GAAGAAAGAGTATGGAGTTG+GGG 0.600188 5_1:-23248646 Msa0724590:CDS
ATCAAGTTATGTTAAGAGCA+CGG 0.601921 5_1:-23245286 Msa0724590:three_prime_UTR
TACCAGTCATAGCTAAAGCA+TGG 0.602812 5_1:+23246049 None:intergenic
TGTTATTGACAACCTCTCCA+TGG 0.602956 5_1:+23247334 None:intergenic
GGATTTGGCTCTGGTAAGCG+TGG 0.604891 5_1:-23246460 Msa0724590:CDS
ACAAAAGATGACACTTTGAT+GGG 0.605437 5_1:+23247035 None:intergenic
TCAGAGGGACTAGAGTACTC+TGG 0.609596 5_1:+23245137 None:intergenic
GCATCAATCAGAGTTTATTG+TGG 0.610783 5_1:-23245353 Msa0724590:CDS
TCTGTCTCTTCACTTGCCTG+TGG 0.612315 5_1:-23248544 Msa0724590:CDS
GATAAATCACCAAATTTGTG+TGG 0.618501 5_1:-23245230 Msa0724590:three_prime_UTR
AATTTACTAAAGTCACTCTA+GGG 0.618918 5_1:-23246077 Msa0724590:CDS
GCATGGTCAACTAGGGTTAG+GGG 0.620068 5_1:-23245435 Msa0724590:CDS
TTACTAAAGTCACTCTAGGG+TGG 0.623493 5_1:-23246074 Msa0724590:CDS
AGAATGGAGAAATAAAGACA+TGG 0.623965 5_1:-23245469 Msa0724590:CDS
CTTTCAACAAGACAAGAGAA+TGG 0.624720 5_1:+23246976 None:intergenic
GACGTAGAGTTTAAGCATTG+TGG 0.628921 5_1:+23246102 None:intergenic
TGGGTGCCTGTTCACTTGTG+GGG 0.629180 5_1:-23247108 Msa0724590:CDS
TAGAGTTTAAGCATTGTGGA+AGG 0.636834 5_1:+23246106 None:intergenic
CTTGGTTCCATCAAGGCCAG+GGG 0.639128 5_1:+23245615 None:intergenic
TCTTGGTTATGATCTGAATG+AGG 0.639316 5_1:-23245378 Msa0724590:CDS
CATGTTGCACAGGTAGCATG+TGG 0.640388 5_1:-23247005 Msa0724590:CDS
TGATGGACATCTGTACACCT+GGG 0.647907 5_1:-23246160 Msa0724590:CDS
GAAGATCACTAAGCACTCCA+AGG 0.652649 5_1:+23245904 None:intergenic
CAGGCAAGTGAAGAGACAGA+GGG 0.661729 5_1:+23248547 None:intergenic
GATGGGAAGGTGTTATCATG+GGG 0.670447 5_1:-23247381 Msa0724590:CDS
AATGGAGAAATAAAGACATG+GGG 0.672946 5_1:-23245467 Msa0724590:CDS
AGGTCAACTAGGCCATGGAG+AGG 0.682116 5_1:-23247346 Msa0724590:CDS
GATCACTAAGCACTCCAAGG+TGG 0.711419 5_1:+23245907 None:intergenic
GATGGACATCTGTACACCTG+GGG 0.712426 5_1:-23246159 Msa0724590:CDS
TTTGATGGGTGAACTATGTG+AGG 0.745760 5_1:+23247049 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATAATTTATGGATTAA+TGG - chr5_1:23245605-23245624 Msa0724590:CDS 10.0%
!!! AATAGATTTTATTTTATCTT+TGG + chr5_1:23247275-23247294 None:intergenic 10.0%
!! TAACAAAAATGTTGTATATT+GGG + chr5_1:23245224-23245243 None:intergenic 15.0%
!! ATAACAAAAATGTTGTATAT+TGG + chr5_1:23245225-23245244 None:intergenic 15.0%
!!! GAAGAATTTTGATTTTATTT+CGG - chr5_1:23245296-23245315 Msa0724590:three_prime_UTR 15.0%
!!! ATATTTTTAGGTTATTTCTA+GGG + chr5_1:23246006-23246025 None:intergenic 15.0%
!!! TATATTTTTAGGTTATTTCT+AGG + chr5_1:23246007-23246026 None:intergenic 15.0%
!!! ACATTTTGATATTTTGTATT+GGG + chr5_1:23246219-23246238 None:intergenic 15.0%
!!! AACATTTTGATATTTTGTAT+TGG + chr5_1:23246220-23246239 None:intergenic 15.0%
!! TAAAAAATAAAAAATGCAGA+TGG - chr5_1:23246296-23246315 Msa0724590:intron 15.0%
!! AAAAAATAAAAAATGCAGAT+GGG - chr5_1:23246297-23246316 Msa0724590:intron 15.0%
!! CAAATGATAATTTAAAAAAG+TGG + chr5_1:23247023-23247042 None:intergenic 15.0%
!! AGGAAATACATTAATTATAA+TGG - chr5_1:23247938-23247957 Msa0724590:intron 15.0%
!! TGTATAATTGTAAATTTAAG+TGG - chr5_1:23248868-23248887 Msa0724590:five_prime_UTR 15.0%
!! GTATAATTGTAAATTTAAGT+GGG - chr5_1:23248869-23248888 Msa0724590:five_prime_UTR 15.0%
!!! ACCTAAAAATATAGTGATTT+TGG - chr5_1:23246014-23246033 Msa0724590:intron 20.0%
!!! TCCAAAATCACTATATTTTT+AGG + chr5_1:23246018-23246037 None:intergenic 20.0%
!! TGATAATTTAAAAAAGTGGA+AGG + chr5_1:23247019-23247038 None:intergenic 20.0%
!! AATATTCATTATCTCTCTAT+TGG - chr5_1:23247496-23247515 Msa0724590:intron 20.0%
!! GAAACAAAATTCATTCAAAA+GGG + chr5_1:23247721-23247740 None:intergenic 20.0%
!! AGAAACAAAATTCATTCAAA+AGG + chr5_1:23247722-23247741 None:intergenic 20.0%
!! TGTTTCTTAAATTTGTGTTT+AGG - chr5_1:23247735-23247754 Msa0724590:intron 20.0%
!!! AGATATAGTTTTCTTATAGT+AGG - chr5_1:23248152-23248171 Msa0724590:intron 20.0%
!!! ATACATTTATGGACTATTAT+AGG - chr5_1:23248774-23248793 Msa0724590:five_prime_UTR 20.0%
! ACTCAAAAACTAGTACTTAT+TGG - chr5_1:23244872-23244891 Msa0724590:three_prime_UTR 25.0%
! ACAATTAAGTTCAACTCAAA+TGG + chr5_1:23245383-23245402 None:intergenic 25.0%
!! TACAGATCAAGAAAATTTTG+TGG - chr5_1:23245533-23245552 Msa0724590:intron 25.0%
!! ACAGATCAAGAAAATTTTGT+GGG - chr5_1:23245534-23245553 Msa0724590:intron 25.0%
!!! TAATGGTGAAGTATTTTGAT+AGG - chr5_1:23245622-23245641 Msa0724590:CDS 25.0%
!! ATTGTTTGAAACTTCAATGA+TGG - chr5_1:23245672-23245691 Msa0724590:intron 25.0%
! ACATTTAGATAGTAACTTGA+TGG - chr5_1:23245745-23245764 Msa0724590:intron 25.0%
! CATTTAGATAGTAACTTGAT+GGG - chr5_1:23245746-23245765 Msa0724590:intron 25.0%
!!! TTCTCTTGTTTTTGTCAAAT+CGG - chr5_1:23245833-23245852 Msa0724590:intron 25.0%
! AACTTAAACAATGAACTGAT+CGG + chr5_1:23245861-23245880 None:intergenic 25.0%
!!! TTTAGTCATTGTTAGTCTTT+TGG - chr5_1:23245932-23245951 Msa0724590:CDS 25.0%
!!! TTCATTTTAGAAGCAGATAT+TGG + chr5_1:23246490-23246509 None:intergenic 25.0%
!!! GCTTCTAAAATGAATAGTTA+AGG - chr5_1:23246496-23246515 Msa0724590:intron 25.0%
! TTGTTGAAAATTGAGTACTT+TGG - chr5_1:23246532-23246551 Msa0724590:intron 25.0%
! ATTTATACATACATGGACAT+TGG + chr5_1:23247074-23247093 None:intergenic 25.0%
! TATGAGCATTTATACATACA+TGG + chr5_1:23247081-23247100 None:intergenic 25.0%
! ATGTATGTATAAATGCTCAT+AGG - chr5_1:23247080-23247099 Msa0724590:CDS 25.0%
! TGTCTTTCAAATCAAGTTTA+TGG - chr5_1:23247214-23247233 Msa0724590:intron 25.0%
! TCAAATCAAGTTTATGGATT+TGG - chr5_1:23247220-23247239 Msa0724590:intron 25.0%
!!! ATTTTTTGAATTTCACATCC+AGG + chr5_1:23247456-23247475 None:intergenic 25.0%
! AAATTTACTAAAGTCACTCT+AGG - chr5_1:23247617-23247636 Msa0724590:intron 25.0%
! AATTTACTAAAGTCACTCTA+GGG - chr5_1:23247618-23247637 Msa0724590:intron 25.0%
! TTAAATTTGTGTTTAGGTGA+GGG - chr5_1:23247741-23247760 Msa0724590:intron 25.0%
!!! TGACAGCAGAAATTTTTTAA+GGG + chr5_1:23247968-23247987 None:intergenic 25.0%
! GACATCTGTTATTAGAATTT+CGG + chr5_1:23248710-23248729 None:intergenic 25.0%
! ACTCCATAAAGATACATTTA+TGG - chr5_1:23248763-23248782 Msa0724590:five_prime_UTR 25.0%
! AGTCCATAAATGTATCTTTA+TGG + chr5_1:23248769-23248788 None:intergenic 25.0%
AGAAAGTGAAAGTAGATTGA+TGG - chr5_1:23244985-23245004 Msa0724590:three_prime_UTR 30.0%
AAGAATCAGAAGAAAGAGTA+TGG - chr5_1:23245041-23245060 Msa0724590:three_prime_UTR 30.0%
AATTGATATGTACTAACCAG+AGG + chr5_1:23245200-23245219 None:intergenic 30.0%
!!! TACTTGCATGATTTTTTTGC+TGG - chr5_1:23245423-23245442 Msa0724590:CDS 30.0%
CTTAAACCTATACTCTTGAA+GGG + chr5_1:23245710-23245729 None:intergenic 30.0%
TCTTAAACCTATACTCTTGA+AGG + chr5_1:23245711-23245730 None:intergenic 30.0%
! TAACTTGATGGGTATAAGTT+TGG - chr5_1:23245757-23245776 Msa0724590:intron 30.0%
! TTTTGGACAATTTCCATGTA+TGG - chr5_1:23245949-23245968 Msa0724590:intron 30.0%
TTTGGACAATTTCCATGTAT+GGG - chr5_1:23245950-23245969 Msa0724590:intron 30.0%
TAATTACCAACCTATCAATG+TGG - chr5_1:23245976-23245995 Msa0724590:intron 30.0%
!!! TTTTTAGGTTATTTCTAGGG+TGG + chr5_1:23246003-23246022 None:intergenic 30.0%
TTAGATGGTAAAAGTTGTGA+GGG - chr5_1:23246065-23246084 Msa0724590:CDS 30.0%
AATAAAAAATGCAGATGGGA+AGG - chr5_1:23246301-23246320 Msa0724590:intron 30.0%
! TTGTTTGGTTTCTAGATACT+GGG - chr5_1:23246568-23246587 Msa0724590:intron 30.0%
ACAAAAGATGACACTTTGAT+GGG + chr5_1:23246663-23246682 None:intergenic 30.0%
AACAAAAGATGACACTTTGA+TGG + chr5_1:23246664-23246683 None:intergenic 30.0%
TATCACTATATTGACACATG+TGG - chr5_1:23246973-23246992 Msa0724590:intron 30.0%
GATAAGTAACTTTGATGTCA+TGG - chr5_1:23247104-23247123 Msa0724590:CDS 30.0%
! TGTGGACTGTAATTTAAAAC+TGG - chr5_1:23247148-23247167 Msa0724590:intron 30.0%
TGTTTATCTCCAATTACCAA+AGG - chr5_1:23247172-23247191 Msa0724590:intron 30.0%
AATCTTCCTAAAGTTACTAG+TGG - chr5_1:23247295-23247314 Msa0724590:CDS 30.0%
TCAAATCCACTAGTAACTTT+AGG + chr5_1:23247304-23247323 None:intergenic 30.0%
TTTGAAGATGAGGAAATAGT+TGG - chr5_1:23247319-23247338 Msa0724590:CDS 30.0%
ATAGTTGGAATTTCTGCAAA+CGG - chr5_1:23247334-23247353 Msa0724590:CDS 30.0%
TGTGAATCACATATAATGCA+AGG + chr5_1:23247402-23247421 None:intergenic 30.0%
ATAAGATAAATCAAGTCACC+TGG - chr5_1:23247435-23247454 Msa0724590:intron 30.0%
GATAGGAAATCATGAAACTT+TGG + chr5_1:23247687-23247706 None:intergenic 30.0%
CTTAAATTTGTGTTTAGGTG+AGG - chr5_1:23247740-23247759 Msa0724590:intron 30.0%
TAAATTTGTGTTTAGGTGAG+GGG - chr5_1:23247742-23247761 Msa0724590:intron 30.0%
TGTTTACAATTAAGTCCAGA+AGG + chr5_1:23247853-23247872 None:intergenic 30.0%
!!! GACAGCAGAAATTTTTTAAG+GGG + chr5_1:23247967-23247986 None:intergenic 30.0%
!!! GTGACAGCAGAAATTTTTTA+AGG + chr5_1:23247969-23247988 None:intergenic 30.0%
AGTAGCAATATCAGTAATCT+TGG + chr5_1:23248101-23248120 None:intergenic 30.0%
AAGATTACTGATATTGCTAC+TGG - chr5_1:23248100-23248119 Msa0724590:intron 30.0%
CTTTCTCAATATTCAGAGAA+TGG - chr5_1:23248210-23248229 Msa0724590:intron 30.0%
AGAATGGAGAAATAAAGACA+TGG - chr5_1:23248226-23248245 Msa0724590:intron 30.0%
GAATGGAGAAATAAAGACAT+GGG - chr5_1:23248227-23248246 Msa0724590:intron 30.0%
AATGGAGAAATAAAGACATG+GGG - chr5_1:23248228-23248247 Msa0724590:intron 30.0%
TAACCAAGATTTACAGTAAC+AGG + chr5_1:23248306-23248325 None:intergenic 30.0%
CTCTTAACATAACTTGATTG+GGG + chr5_1:23248407-23248426 None:intergenic 30.0%
GCTCTTAACATAACTTGATT+GGG + chr5_1:23248408-23248427 None:intergenic 30.0%
TGCTCTTAACATAACTTGAT+TGG + chr5_1:23248409-23248428 None:intergenic 30.0%
ATCAAGTTATGTTAAGAGCA+CGG - chr5_1:23248409-23248428 Msa0724590:intron 30.0%
! CACAAATTTGGTGATTTATC+TGG + chr5_1:23248465-23248484 None:intergenic 30.0%
GATAAATCACCAAATTTGTG+TGG - chr5_1:23248465-23248484 Msa0724590:intron 30.0%
AGTGATAACTCTCGAAAAAA+TGG - chr5_1:23248618-23248637 Msa0724590:CDS 30.0%
!! TTGAGTTCAGTCTTGTTCTT+GGG + chr5_1:23244858-23244877 None:intergenic 35.0%
!! TTTGAGTTCAGTCTTGTTCT+TGG + chr5_1:23244859-23244878 None:intergenic 35.0%
!!! AGGAAGTACTTTTTTCTCGA+TGG + chr5_1:23244904-23244923 None:intergenic 35.0%
!! ATCGAGAAAAAAGTACTTCC+TGG - chr5_1:23244903-23244922 Msa0724590:three_prime_UTR 35.0%
!! GAAAAAAGTACTTCCTGGTA+CGG - chr5_1:23244908-23244927 Msa0724590:three_prime_UTR 35.0%
! AGAAGAAAGAGTATGGAGTT+GGG - chr5_1:23245048-23245067 Msa0724590:three_prime_UTR 35.0%
TATGTACTAACCAGAGGTTA+AGG + chr5_1:23245194-23245213 None:intergenic 35.0%
!!! TGGTGAAGTATTTTGATAGG+TGG - chr5_1:23245625-23245644 Msa0724590:CDS 35.0%
CTGTTAGAAGTAGTACTTCA+AGG + chr5_1:23245907-23245926 None:intergenic 35.0%
CTTAGATGGTAAAAGTTGTG+AGG - chr5_1:23246064-23246083 Msa0724590:CDS 35.0%
AACGTGAAGTAGAGTAATAC+TGG + chr5_1:23246120-23246139 None:intergenic 35.0%
AGTTTCGTCGCTAAGTTATT+TGG - chr5_1:23246151-23246170 Msa0724590:CDS 35.0%
CAATAACATGTTGTATCCCA+AGG - chr5_1:23246376-23246395 Msa0724590:CDS 35.0%
TCCAATGATGTTATAGCCTT+GGG + chr5_1:23246395-23246414 None:intergenic 35.0%
AACCTGAAACAAAACCTGAA+TGG + chr5_1:23246454-23246473 None:intergenic 35.0%
! GGTCTTTTCTTGTTCTTGTT+TGG - chr5_1:23246553-23246572 Msa0724590:intron 35.0%
! CTTGTTTGGTTTCTAGATAC+TGG - chr5_1:23246567-23246586 Msa0724590:intron 35.0%
CTTTCAACAAGACAAGAGAA+TGG + chr5_1:23246722-23246741 None:intergenic 35.0%
! CATTCTCTTGTCTTGTTGAA+AGG - chr5_1:23246720-23246739 Msa0724590:intron 35.0%
! CTTGTCTTGTTGAAAGGTAT+TGG - chr5_1:23246726-23246745 Msa0724590:intron 35.0%
AGCACTTACACTTTAGATTG+AGG - chr5_1:23246914-23246933 Msa0724590:intron 35.0%
! TCAAAACGACCTTTGGTAAT+TGG + chr5_1:23247184-23247203 None:intergenic 35.0%
!! TACTAGTGGATTTGAAGATG+AGG - chr5_1:23247309-23247328 Msa0724590:CDS 35.0%
TAATGCAAGGTAAGAAGTGA+TGG + chr5_1:23247389-23247408 None:intergenic 35.0%
!!! GTTGTTTTTGCATCAGTTGA+TGG - chr5_1:23247518-23247537 Msa0724590:intron 35.0%
! TAGAGTTTAAGCATTGTGGA+AGG + chr5_1:23247592-23247611 None:intergenic 35.0%
AAATTTGTGTTTAGGTGAGG+GGG - chr5_1:23247743-23247762 Msa0724590:intron 35.0%
!!! AGCAGAAATTTTTTAAGGGG+TGG + chr5_1:23247964-23247983 None:intergenic 35.0%
ATGAAACTCCGAAACATTTG+TGG + chr5_1:23247991-23248010 None:intergenic 35.0%
AGATTCAAGAGAAGCTAACT+TGG - chr5_1:23248051-23248070 Msa0724590:intron 35.0%
AGAAATAAAGACATGGGGAT+GGG - chr5_1:23248233-23248252 Msa0724590:intron 35.0%
TTACAGTAACAGGACTGATT+CGG + chr5_1:23248296-23248315 None:intergenic 35.0%
AGTCCTGTTACTGTAAATCT+TGG - chr5_1:23248300-23248319 Msa0724590:intron 35.0%
TCTTGGTTATGATCTGAATG+AGG - chr5_1:23248317-23248336 Msa0724590:intron 35.0%
GCATCAATCAGAGTTTATTG+TGG - chr5_1:23248342-23248361 Msa0724590:intron 35.0%
ATCAGAGTTTATTGTGGAAG+TGG - chr5_1:23248348-23248367 Msa0724590:intron 35.0%
ACTTGATTGGGGAGAATTTA+TGG + chr5_1:23248396-23248415 None:intergenic 35.0%
ATGGAGAGCTGCATTATTTA+TGG - chr5_1:23248637-23248656 Msa0724590:CDS 35.0%
CAAACCAGAATTTGTGAAAC+TGG + chr5_1:23248813-23248832 None:intergenic 35.0%
! CAGAAGAAAGAGTATGGAGT+TGG - chr5_1:23245047-23245066 Msa0724590:three_prime_UTR 40.0%
! GAAGAAAGAGTATGGAGTTG+GGG - chr5_1:23245049-23245068 Msa0724590:three_prime_UTR 40.0%
ACAGATGGTCAATTAGGAAC+AGG - chr5_1:23245079-23245098 Msa0724590:three_prime_UTR 40.0%
! TTTTGATAGGTGGTCTATCG+TGG - chr5_1:23245635-23245654 Msa0724590:CDS 40.0%
GATGGGTATAAGTTTGGCAA+CGG - chr5_1:23245763-23245782 Msa0724590:intron 40.0%
TTGTGATGAGTGATGACCAA+TGG - chr5_1:23245879-23245898 Msa0724590:CDS 40.0%
TGTGATGAGTGATGACCAAT+GGG - chr5_1:23245880-23245899 Msa0724590:CDS 40.0%
TGGTAATTACGACCCATACA+TGG + chr5_1:23245965-23245984 None:intergenic 40.0%
TCTTGTAGTTGCAGCTTAGA+TGG - chr5_1:23246050-23246069 Msa0724590:intron 40.0%
!! AGATGGGAAGGTGTTATCAT+GGG - chr5_1:23246313-23246332 Msa0724590:intron 40.0%
TGTTATTGACAACCTCTCCA+TGG + chr5_1:23246364-23246383 None:intergenic 40.0%
TCCCAAGGCTATAACATCAT+TGG - chr5_1:23246391-23246410 Msa0724590:CDS 40.0%
GTCCAATGATGTTATAGCCT+TGG + chr5_1:23246396-23246415 None:intergenic 40.0%
TTCATAACCAATGTCTCAGC+TGG - chr5_1:23246422-23246441 Msa0724590:CDS 40.0%
ATGGTTCCTTTGGTCAACTT+GGG - chr5_1:23246610-23246629 Msa0724590:intron 40.0%
! TTTGATGGGTGAACTATGTG+AGG + chr5_1:23246649-23246668 None:intergenic 40.0%
TGTTGATCAACATGTTGCAC+AGG - chr5_1:23246680-23246699 Msa0724590:intron 40.0%
ACAGTCACACAGTTGTATCA+CGG - chr5_1:23246810-23246829 Msa0724590:intron 40.0%
ATCAGATACAACTGCAAGTG+TGG - chr5_1:23246866-23246885 Msa0724590:intron 40.0%
ACTTTAGATTGAGGCATGTC+TGG - chr5_1:23246923-23246942 Msa0724590:intron 40.0%
ACTTTGATGTCATGGACTCA+TGG - chr5_1:23247112-23247131 Msa0724590:CDS 40.0%
! CAAGTTTATGGATTTGGCTC+TGG - chr5_1:23247226-23247245 Msa0724590:intron 40.0%
GATCATAGTGCTGCATTATC+TGG - chr5_1:23247358-23247377 Msa0724590:CDS 40.0%
! GACGTAGAGTTTAAGCATTG+TGG + chr5_1:23247596-23247615 None:intergenic 40.0%
! TTACTAAAGTCACTCTAGGG+TGG - chr5_1:23247621-23247640 Msa0724590:intron 40.0%
AACCATGCTTTAGCTATGAC+TGG - chr5_1:23247644-23247663 Msa0724590:intron 40.0%
TACCAGTCATAGCTAAAGCA+TGG + chr5_1:23247649-23247668 None:intergenic 40.0%
ATTCAAAAGGGAAGTGACAG+AGG + chr5_1:23247709-23247728 None:intergenic 40.0%
TGATCTTCACAATGCAAGAC+CGG - chr5_1:23247806-23247825 Msa0724590:intron 40.0%
TGCTGTCACCACAAATGTTT+CGG - chr5_1:23247980-23247999 Msa0724590:intron 40.0%
CAGTAATCTTGGTTCCATCA+AGG + chr5_1:23248090-23248109 None:intergenic 40.0%
ACTATATCTTGCCTGTGACA+AGG + chr5_1:23248141-23248160 None:intergenic 40.0%
GAGAAATAAAGACATGGGGA+TGG - chr5_1:23248232-23248251 Msa0724590:intron 40.0%
GAAATAAAGACATGGGGATG+GGG - chr5_1:23248234-23248253 Msa0724590:intron 40.0%
!! TATCTGGATGTACTGGCTTT+GGG + chr5_1:23248449-23248468 None:intergenic 40.0%
!! TTATCTGGATGTACTGGCTT+TGG + chr5_1:23248450-23248469 None:intergenic 40.0%
GGTGATTTATCTGGATGTAC+TGG + chr5_1:23248456-23248475 None:intergenic 40.0%
ATCACCAAATTTGTGTGGTG+CGG - chr5_1:23248470-23248489 Msa0724590:intron 40.0%
GCATGAGAAGCAAAATTGTC+TGG + chr5_1:23248506-23248525 None:intergenic 40.0%
!!! TCTCATGCTGTTTTGAGTTC+AGG - chr5_1:23248518-23248537 Msa0724590:CDS 40.0%
AAGCAAAAGGCTCTCTGATA+TGG - chr5_1:23248593-23248612 Msa0724590:CDS 40.0%
AGCAAAAGGCTCTCTGATAT+GGG - chr5_1:23248594-23248613 Msa0724590:CDS 40.0%
GAAGCCAGTTTCACAAATTC+TGG - chr5_1:23248806-23248825 Msa0724590:five_prime_UTR 40.0%
!! TCACAAATTCTGGTTTGAGC+TGG - chr5_1:23248816-23248835 Msa0724590:five_prime_UTR 40.0%
! GTACGGAGTACGTGTTTTGT+GGG - chr5_1:23244925-23244944 Msa0724590:three_prime_UTR 45.0%
GCTGGAACAGATGGTCAATT+AGG - chr5_1:23245073-23245092 Msa0724590:three_prime_UTR 45.0%
AGAGACAGAGACAGTTGTTG+AGG + chr5_1:23245127-23245146 None:intergenic 45.0%
! TTGTCGCCCTTCAAGAGTAT+AGG - chr5_1:23245701-23245720 Msa0724590:intron 45.0%
GTAGTACTTCAAGGTCCCAT+TGG + chr5_1:23245898-23245917 None:intergenic 45.0%
!! TGTGAGGGTCATTGATTTGC+TGG - chr5_1:23246080-23246099 Msa0724590:CDS 45.0%
!! GTCATTGATTTGCTGGAGTG+CGG - chr5_1:23246087-23246106 Msa0724590:CDS 45.0%
!! TCATTGATTTGCTGGAGTGC+GGG - chr5_1:23246088-23246107 Msa0724590:CDS 45.0%
!! CAGATGGGAAGGTGTTATCA+TGG - chr5_1:23246312-23246331 Msa0724590:intron 45.0%
!! GATGGGAAGGTGTTATCATG+GGG - chr5_1:23246314-23246333 Msa0724590:intron 45.0%
!! GAAGGTGTTATCATGGGGTA+GGG - chr5_1:23246319-23246338 Msa0724590:intron 45.0%
! AAGGTGTTATCATGGGGTAG+GGG - chr5_1:23246320-23246339 Msa0724590:intron 45.0%
AGGGGAAATTCAGGTCAACT+AGG - chr5_1:23246338-23246357 Msa0724590:CDS 45.0%
AATTCAGGTCAACTAGGCCA+TGG - chr5_1:23246344-23246363 Msa0724590:CDS 45.0%
TAACCAATGTCTCAGCTGGT+TGG - chr5_1:23246426-23246445 Msa0724590:CDS 45.0%
AACCAATGTCTCAGCTGGTT+GGG - chr5_1:23246427-23246446 Msa0724590:CDS 45.0%
!!! GGCCATTCAGGTTTTGTTTC+AGG - chr5_1:23246449-23246468 Msa0724590:CDS 45.0%
GATGGTTCCTTTGGTCAACT+TGG - chr5_1:23246609-23246628 Msa0724590:intron 45.0%
TGCATCGTCAAAACGACCTT+TGG + chr5_1:23247191-23247210 None:intergenic 45.0%
!! AAAGGTCGTTTTGACGATGC+AGG - chr5_1:23247190-23247209 Msa0724590:intron 45.0%
! TTGATGGACATCTGTACACC+TGG - chr5_1:23247534-23247553 Msa0724590:intron 45.0%
! TGATGGACATCTGTACACCT+GGG - chr5_1:23247535-23247554 Msa0724590:intron 45.0%
AAAGGGAAGTGACAGAGGAT+AGG + chr5_1:23247704-23247723 None:intergenic 45.0%
AGGGGGAGGTTTATATGCTT+GGG - chr5_1:23247760-23247779 Msa0724590:intron 45.0%
GAAGATCACTAAGCACTCCA+AGG + chr5_1:23247794-23247813 None:intergenic 45.0%
AGACCGGCTAAGTCGTTATT+CGG - chr5_1:23247822-23247841 Msa0724590:intron 45.0%
GTACCGAATAACGACTTAGC+CGG + chr5_1:23247828-23247847 None:intergenic 45.0%
CGTTATTCGGTACTTCCTTC+TGG - chr5_1:23247835-23247854 Msa0724590:intron 45.0%
AGCATGGTCAACTAGGGTTA+GGG - chr5_1:23248259-23248278 Msa0724590:intron 45.0%
!! ATCTGGATGTACTGGCTTTG+GGG + chr5_1:23248448-23248467 None:intergenic 45.0%
!! TTCTGGTTTGAGCTGGAACA+TGG - chr5_1:23248823-23248842 Msa0724590:five_prime_UTR 45.0%
!!! ATATATATTTTTTTTTAGAA+GGG + chr5_1:23245486-23245505 None:intergenic 5.0%
!!! AATATATATTTTTTTTTAGA+AGG + chr5_1:23245487-23245506 None:intergenic 5.0%
!! TATATCTTATAAATAATTTA+TGG - chr5_1:23245597-23245616 Msa0724590:CDS 5.0%
!!! TTTTTAACTTTAATATTAAA+AGG - chr5_1:23247918-23247937 Msa0724590:intron 5.0%
CAAAACACGTACTCCGTACC+AGG + chr5_1:23244924-23244943 None:intergenic 50.0%
! GGTACGGAGTACGTGTTTTG+TGG - chr5_1:23244924-23244943 Msa0724590:three_prime_UTR 50.0%
CAGGCAAGTGAAGAGACAGA+GGG + chr5_1:23245151-23245170 None:intergenic 50.0%
ACAGGCAAGTGAAGAGACAG+AGG + chr5_1:23245152-23245171 None:intergenic 50.0%
TCTGTCTCTTCACTTGCCTG+TGG - chr5_1:23245151-23245170 Msa0724590:three_prime_UTR 50.0%
CATGTCATCGCCTTAACCTC+TGG - chr5_1:23245181-23245200 Msa0724590:three_prime_UTR 50.0%
GGTGGACCACATTGATAGGT+TGG + chr5_1:23245985-23246004 None:intergenic 50.0%
CTAGGGTGGACCACATTGAT+AGG + chr5_1:23245989-23246008 None:intergenic 50.0%
!! GGAAGGTGTTATCATGGGGT+AGG - chr5_1:23246318-23246337 Msa0724590:intron 50.0%
TCATGGGGTAGGGGAAATTC+AGG - chr5_1:23246329-23246348 Msa0724590:intron 50.0%
ACCAATGTCTCAGCTGGTTG+GGG - chr5_1:23246428-23246447 Msa0724590:CDS 50.0%
AACCATCCCCACAAGTGAAC+AGG + chr5_1:23246596-23246615 None:intergenic 50.0%
ACTTGTGGGGATGGTTCCTT+TGG - chr5_1:23246600-23246619 Msa0724590:intron 50.0%
TCCTTTGGTCAACTTGGGCA+TGG - chr5_1:23246615-23246634 Msa0724590:intron 50.0%
! ACCATGCCCAAGTTGACCAA+AGG + chr5_1:23246619-23246638 None:intergenic 50.0%
CATGTTGCACAGGTAGCATG+TGG - chr5_1:23246690-23246709 Msa0724590:intron 50.0%
CATGGTCACGATCGCAATTG+TGG - chr5_1:23247130-23247149 Msa0724590:intron 50.0%
TCTGGTAAGCGTGGTCAGTT+GGG - chr5_1:23247244-23247263 Msa0724590:intron 50.0%
GATGGACATCTGTACACCTG+GGG - chr5_1:23247536-23247555 Msa0724590:intron 50.0%
TTTGTGTTTAGGTGAGGGGG+AGG - chr5_1:23247746-23247765 Msa0724590:intron 50.0%
GAGGGGGAGGTTTATATGCT+TGG - chr5_1:23247759-23247778 Msa0724590:intron 50.0%
GGGGGAGGTTTATATGCTTG+GGG - chr5_1:23247761-23247780 Msa0724590:intron 50.0%
GGGGAGGTTTATATGCTTGG+GGG - chr5_1:23247762-23247781 Msa0724590:intron 50.0%
GATCACTAAGCACTCCAAGG+TGG + chr5_1:23247791-23247810 None:intergenic 50.0%
TCTTGGTTCCATCAAGGCCA+GGG + chr5_1:23248084-23248103 None:intergenic 50.0%
ATCTTGGTTCCATCAAGGCC+AGG + chr5_1:23248085-23248104 None:intergenic 50.0%
GAGCATTCTGTCCTTGTCAC+AGG - chr5_1:23248127-23248146 Msa0724590:intron 50.0%
GAGCATGGTCAACTAGGGTT+AGG - chr5_1:23248258-23248277 Msa0724590:intron 50.0%
GCATGGTCAACTAGGGTTAG+GGG - chr5_1:23248260-23248279 Msa0724590:intron 50.0%
CAACTAGGGTTAGGGGATGA+TGG - chr5_1:23248267-23248286 Msa0724590:intron 50.0%
! TCAGAGGGACTAGAGTACTC+TGG + chr5_1:23248561-23248580 None:intergenic 50.0%
TACTCTAGTCCCTCTGAGCT+GGG - chr5_1:23248564-23248583 Msa0724590:CDS 50.0%
AGAGTATGGAGTTGGGGTGC+TGG - chr5_1:23245055-23245074 Msa0724590:three_prime_UTR 55.0%
!! AGTTGGGGTGCTGGAACAGA+TGG - chr5_1:23245064-23245083 Msa0724590:three_prime_UTR 55.0%
GTCTCTTCACTTGCCTGTGG+CGG - chr5_1:23245154-23245173 Msa0724590:three_prime_UTR 55.0%
AGGTCAACTAGGCCATGGAG+AGG - chr5_1:23246349-23246368 Msa0724590:CDS 55.0%
ACTGGGTGCCTGTTCACTTG+TGG - chr5_1:23246585-23246604 Msa0724590:intron 55.0%
CTGGGTGCCTGTTCACTTGT+GGG - chr5_1:23246586-23246605 Msa0724590:intron 55.0%
TGGGTGCCTGTTCACTTGTG+GGG - chr5_1:23246587-23246606 Msa0724590:intron 55.0%
TGCCTGTTCACTTGTGGGGA+TGG - chr5_1:23246591-23246610 Msa0724590:intron 55.0%
!! GGATTTGGCTCTGGTAAGCG+TGG - chr5_1:23247235-23247254 Msa0724590:intron 55.0%
CTCTGGTAAGCGTGGTCAGT+TGG - chr5_1:23247243-23247262 Msa0724590:intron 55.0%
CATCTGTACACCTGGGGAAG+AGG - chr5_1:23247542-23247561 Msa0724590:intron 55.0%
ACCTGGGGAAGAGGCTTCAA+GGG - chr5_1:23247551-23247570 Msa0724590:intron 55.0%
GCTAACTTGGAGAAAGCCCC+TGG - chr5_1:23248064-23248083 Msa0724590:intron 55.0%
CTTGGTTCCATCAAGGCCAG+GGG + chr5_1:23248083-23248102 None:intergenic 55.0%
GACGCCGCACCACACAAATT+TGG + chr5_1:23248477-23248496 None:intergenic 55.0%
GTACTCTAGTCCCTCTGAGC+TGG - chr5_1:23248563-23248582 Msa0724590:CDS 55.0%
AGCTGGGACTGGGAAGCAAA+AGG - chr5_1:23248580-23248599 Msa0724590:CDS 55.0%
GCCCCAACCAGCTGAGACAT+TGG + chr5_1:23246432-23246451 None:intergenic 60.0%
TCAGCTGGTTGGGGCCATTC+AGG - chr5_1:23246437-23246456 Msa0724590:CDS 60.0%
CACCTGGGGAAGAGGCTTCA+AGG - chr5_1:23247550-23247569 Msa0724590:intron 60.0%
ATGCTTGGGGGCAACCACCT+TGG - chr5_1:23247774-23247793 Msa0724590:intron 60.0%
!! GAGAAAGCCCCTGGCCTTGA+TGG - chr5_1:23248073-23248092 Msa0724590:intron 60.0%
TGGGGCGAGCATGGTCAACT+AGG - chr5_1:23248252-23248271 Msa0724590:intron 60.0%
GGGGCGAGCATGGTCAACTA+GGG - chr5_1:23248253-23248272 Msa0724590:intron 60.0%
TAGTCCCTCTGAGCTGGGAC+TGG - chr5_1:23248569-23248588 Msa0724590:CDS 60.0%
AGTCCCTCTGAGCTGGGACT+GGG - chr5_1:23248570-23248589 Msa0724590:CDS 60.0%
CTTCCCAGTCCCAGCTCAGA+GGG + chr5_1:23248576-23248595 None:intergenic 60.0%
! GATGACATGAGCGCCGCCAC+AGG + chr5_1:23245170-23245189 None:intergenic 65.0%
GCCCTTGAAGCCTCTTCCCC+AGG + chr5_1:23247555-23247574 None:intergenic 65.0%
ACATGGGGATGGGGCGAGCA+TGG - chr5_1:23248243-23248262 Msa0724590:intron 65.0%
GCTTCCCAGTCCCAGCTCAG+AGG + chr5_1:23248577-23248596 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 23244824 23248893 23244824 ID=Msa0724590;Name=Msa0724590
chr5_1 mRNA 23244824 23248893 23244824 ID=Msa0724590-mRNA-1;Parent=Msa0724590;Name=Msa0724590-mRNA-1;_AED=0.01;_eAED=0.01;_QI=180|0.85|0.75|1|1|1|8|495|386
chr5_1 exon 23244824 23245489 23244824 ID=Msa0724590-mRNA-1:exon:8691;Parent=Msa0724590-mRNA-1
chr5_1 exon 23245576 23245664 23245576 ID=Msa0724590-mRNA-1:exon:8690;Parent=Msa0724590-mRNA-1
chr5_1 exon 23245874 23245960 23245874 ID=Msa0724590-mRNA-1:exon:8689;Parent=Msa0724590-mRNA-1
chr5_1 exon 23246052 23246183 23246052 ID=Msa0724590-mRNA-1:exon:8688;Parent=Msa0724590-mRNA-1
chr5_1 exon 23246338 23246505 23246338 ID=Msa0724590-mRNA-1:exon:8687;Parent=Msa0724590-mRNA-1
chr5_1 exon 23246976 23247134 23246976 ID=Msa0724590-mRNA-1:exon:8686;Parent=Msa0724590-mRNA-1
chr5_1 exon 23247247 23247402 23247247 ID=Msa0724590-mRNA-1:exon:8685;Parent=Msa0724590-mRNA-1
chr5_1 exon 23248515 23248893 23248515 ID=Msa0724590-mRNA-1:exon:8684;Parent=Msa0724590-mRNA-1
chr5_1 five_prime_UTR 23248714 23248893 23248714 ID=Msa0724590-mRNA-1:five_prime_utr;Parent=Msa0724590-mRNA-1
chr5_1 CDS 23248515 23248713 23248515 ID=Msa0724590-mRNA-1:cds;Parent=Msa0724590-mRNA-1
chr5_1 CDS 23247247 23247402 23247247 ID=Msa0724590-mRNA-1:cds;Parent=Msa0724590-mRNA-1
chr5_1 CDS 23246976 23247134 23246976 ID=Msa0724590-mRNA-1:cds;Parent=Msa0724590-mRNA-1
chr5_1 CDS 23246338 23246505 23246338 ID=Msa0724590-mRNA-1:cds;Parent=Msa0724590-mRNA-1
chr5_1 CDS 23246052 23246183 23246052 ID=Msa0724590-mRNA-1:cds;Parent=Msa0724590-mRNA-1
chr5_1 CDS 23245874 23245960 23245874 ID=Msa0724590-mRNA-1:cds;Parent=Msa0724590-mRNA-1
chr5_1 CDS 23245576 23245664 23245576 ID=Msa0724590-mRNA-1:cds;Parent=Msa0724590-mRNA-1
chr5_1 CDS 23245319 23245489 23245319 ID=Msa0724590-mRNA-1:cds;Parent=Msa0724590-mRNA-1
chr5_1 three_prime_UTR 23244824 23245318 23244824 ID=Msa0724590-mRNA-1:three_prime_utr;Parent=Msa0724590-mRNA-1
Gene Sequence

>Msa0724590

ATGGAAGAAAGTGAACAAGTGAAAACTGAAGAGAAAGAAGAATCAGAAGAAAGAGTATGGAGTTGGGGTGCTGGAACAGATGGTCAATTAGGAACAGGTAAGCTTCAAGATGAACAACTTCCTCAACAACTGTCTCTGTCTCTGCCCTCTGTCTCTTCACTTGCCTGTGGCGGCGCTCATGTCATCGCCTTAACCTCTGATGGGAAGGTGTTATCATGGGGTAGGGGAAATTCAGGTCAACTAGGCCATGGAGAGGTTGTCAATAACATGTTGTATCCCAAGGCTATAACATCATTGGACAACTACTTCATAACCAATGTCTCAGCTGGTTGGGGCCATTCAGGTTTTGTTTCAGATACTGGGTGCCTGTTCACTTGTGGGGATGGTTCCTTTGGTCAACTTGGGCATGGTGATTATGCCTCACATAGTTCACCCATCAAAGTGTCATCTTTTGTTGATCAACATGTTGCACAGGTAGCATGTGGAATGCGCCATTCTCTTGTCTTGTTGAAAGGCTGTCTTTCAAATCAAGTTTATGGATTTGGCTCTGGTAAGCGTGGTCAGTTGGGTGTATCCAAAGATAAAATAAAATCTATTAATCTTCCTAAAGTTACTAGTGGATTTGAAGATGAGGAAATAGTTGGAATTTCTGCAAACGGAGATCATAGTGCTGCATTATCTGTTGATGGACATCTGTACACCTGGGGAAGAGGCTTCAAGGGCTATGAAGATTCACACCTTCCACAATGCTTAAACTCTACGTCGAAATTTACTAAAGTCACTCTAGGGTGGAACCATGCTTTAGCTATGACTGGTGAGGGGGAGGTTTATATGCTTGGGGGCAACCACCTTGGAGTGCTTAGTGATCTTCACAATGCAAGACCGGCTAAGTCGTTATTCGATTCAAGAGAAGCTAACTTGGAGAAAGCCCCTGGCCTTGATGGAACCAAGATTACTGATATTGCTACTGGAGCTGAGCATTCTGTCCTTAATGGAGAAATAAAGACATGGGGATGGGGCGAGCATGGTCAACTAGGGTTAGGGGATGATGGTGACCGAATCAGTCCTGTTACTGTAAATCTTGGTTATGATCTGAATGAGGCTGCATCAATCAGAGTTTATTGTGGAAGTGGTTTTACATTTGCTTTAACAAAGCCATAA
Protein sequence

>Msa0724590

MEESEQVKTEEKEESEERVWSWGAGTDGQLGTGKLQDEQLPQQLSLSLPSVSSLACGGAHVIALTSDGKVLSWGRGNSGQLGHGEVVNNMLYPKAITSLDNYFITNVSAGWGHSGFVSDTGCLFTCGDGSFGQLGHGDYASHSSPIKVSSFVDQHVAQVACGMRHSLVLLKGCLSNQVYGFGSGKRGQLGVSKDKIKSINLPKVTSGFEDEEIVGISANGDHSAALSVDGHLYTWGRGFKGYEDSHLPQCLNSTSKFTKVTLGWNHALAMTGEGEVYMLGGNHLGVLSDLHNARPAKSLFDSREANLEKAPGLDGTKITDIATGAEHSVLNGEIKTWGWGEHGQLGLGDDGDRISPVTVNLGYDLNEAASIRVYCGSGFTFALTKP*