AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1217810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1217810 MtrunA17_Chr4g0067311 95.385 260 10 1 15 274 1 258 0.0 508
Msa1217810 MtrunA17_Chr4g0069041 55.474 137 10 3 6 142 15 100 2.35e-36 125
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1217810 AT3G16565.6 65.504 258 87 1 17 274 1 256 4.21e-122 349
Msa1217810 AT3G16565.2 65.504 258 87 1 17 274 1 256 4.21e-122 349
Msa1217810 AT3G16565.1 65.116 258 85 2 17 274 1 253 1.77e-118 340
Msa1217810 AT3G16565.3 57.732 291 88 2 17 274 1 289 1.46e-113 328
Msa1217810 AT3G16565.4 66.505 206 69 0 17 222 1 206 6.61e-95 278
Msa1217810 AT3G16565.5 56.904 239 70 1 17 222 1 239 2.53e-86 258
Msa1217810 AT5G22800.2 30.189 212 128 8 52 256 601 799 2.41e-13 70.5
Msa1217810 AT5G22800.1 30.189 212 128 8 52 256 576 774 3.20e-13 70.1

Find 68 sgRNAs with CRISPR-Local

Find 556 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAGGAGAAAATTAAATTCT+AGG 0.300109 8_1:-80321666 Msa1217810:intron
TTGATCAGGTTTCTCAAATT+CGG 0.346790 8_1:-80315013 Msa1217810:intron
CAAACTTTGTAAGGTTTGTA+TGG 0.348751 8_1:-80314751 Msa1217810:three_prime_UTR
GCAAAAGGAGTTGGAGTTAG+AGG 0.349791 8_1:-80317875 Msa1217810:CDS
GGGTATGGGAGGGGAGTTTG+AGG 0.352926 8_1:-80321734 Msa1217810:CDS
TTGTATTGTTTCCAGGCCTT+GGG 0.357304 8_1:-80317941 Msa1217810:intron
CACTATCTGTTGATGAGAAC+AGG 0.362606 8_1:-80321684 Msa1217810:CDS
ATTCATAGGCAAACTTTGTA+AGG 0.378190 8_1:-80314760 Msa1217810:three_prime_UTR
AGGCCTTGGGTTGAATATAA+AGG 0.378624 8_1:-80317928 Msa1217810:CDS
ACACAGAGTCGCGCCGCTTC+TGG 0.389499 8_1:-80322218 Msa1217810:intron
TGTACGGATTGGGGATAATC+CGG 0.395452 8_1:-80315309 Msa1217810:CDS
AATGTTGGATAGGGAGTTGA+TGG 0.397558 8_1:-80322003 Msa1217810:intron
TTGTGCAGGTTGCACTCAGC+AGG 0.415733 8_1:-80321151 Msa1217810:intron
GGCTAATGCTTTAATTTCCA+TGG 0.419548 8_1:-80317854 Msa1217810:CDS
TGGCTGTTATATCTATTCAT+AGG 0.427137 8_1:-80314774 Msa1217810:three_prime_UTR
CACCTCGCATTGTACGGATT+GGG 0.432739 8_1:-80315319 Msa1217810:CDS
TAGTAGGGTGGTGGTGGAGA+TGG 0.436792 8_1:-80322188 Msa1217810:CDS
AATGTCGAATCTTAGTTAAG+TGG 0.437983 8_1:-80314960 Msa1217810:exon
CGCTTCTGGAATTGAGTAGT+AGG 0.443076 8_1:-80322204 Msa1217810:CDS
TTCTCAAATTCGGTCAAAGA+AGG 0.445973 8_1:-80315003 Msa1217810:CDS
TCTTCCTGATTATGTTCCTA+AGG 0.460059 8_1:-80317696 Msa1217810:intron
TCATAGTAATCCAGCTTTGT+GGG 0.461839 8_1:+80322157 None:intergenic
TAAAACATGGGTACCGCCGC+AGG 0.463819 8_1:+80315280 None:intergenic
CTGACCTTAGGAACATAATC+AGG 0.469308 8_1:+80317692 None:intergenic
ATTGAGTAGTAGGGTGGTGG+TGG 0.470645 8_1:-80322194 Msa1217810:CDS
GATGAAGCTGCTAAGCTTTG+CGG 0.483576 8_1:-80317725 Msa1217810:CDS
ATCATAGTAATCCAGCTTTG+TGG 0.484891 8_1:+80322156 None:intergenic
GGATTGGGTCATTTAGAGCC+TGG 0.485368 8_1:-80321097 Msa1217810:CDS
ACACCTCGCATTGTACGGAT+TGG 0.489775 8_1:-80315320 Msa1217810:CDS
GGACAAGAGTCCCACAAAGC+TGG 0.491664 8_1:-80322167 Msa1217810:CDS
GGAATTGAGTAGTAGGGTGG+TGG 0.500789 8_1:-80322197 Msa1217810:CDS
TCCACAAGGTGGTGGTCAGC+CGG 0.501169 8_1:-80321944 Msa1217810:CDS
TGAAATGCAGAATAAGCAAA+AGG 0.506242 8_1:-80317890 Msa1217810:CDS
GCAGAATAAGCAAAAGGAGT+TGG 0.508258 8_1:-80317884 Msa1217810:CDS
AATGATGTTCGATCAAAAGA+TGG 0.510552 8_1:-80321871 Msa1217810:CDS
GTCTGAAACATCTAAAACAT+GGG 0.520748 8_1:+80315268 None:intergenic
GCTAATGCTTTAATTTCCAT+GGG 0.522601 8_1:-80317853 Msa1217810:CDS
AAAGCACACCTCGCATTGTA+CGG 0.524701 8_1:-80315325 Msa1217810:CDS
ATTAAGAATCCAGTGTCTGC+CGG 0.535034 8_1:+80321925 None:intergenic
TTTGAGGGCACACTAGAGAA+AGG 0.539934 8_1:-80321718 Msa1217810:CDS
AGTGGACGAGTCTGCTGTCA+AGG 0.552224 8_1:-80314942 Msa1217810:three_prime_UTR
GCCGGCTGACCACCACCTTG+TGG 0.552800 8_1:+80321943 None:intergenic
CTACTACTCAATTCCAGAAG+CGG 0.562050 8_1:+80322205 None:intergenic
TCTCAAATTCGGTCAAAGAA+GGG 0.565098 8_1:-80315002 Msa1217810:CDS
ACCTCGCATTGTACGGATTG+GGG 0.572803 8_1:-80315318 Msa1217810:CDS
GTACGGATTGGGGATAATCC+GGG 0.576570 8_1:-80315308 Msa1217810:CDS
GCTTCTGGAATTGAGTAGTA+GGG 0.580690 8_1:-80322203 Msa1217810:CDS
TTGAGGGCACACTAGAGAAA+GGG 0.582796 8_1:-80321717 Msa1217810:CDS
TCCAAGAGCACACATCGCCA+TGG 0.584035 8_1:+80314903 None:intergenic
GGTATGGGAGGGGAGTTTGA+GGG 0.586173 8_1:-80321733 Msa1217810:CDS
AATCCGGGCTGTCCCTGCGG+CGG 0.588850 8_1:-80315293 Msa1217810:CDS
AATGCTTTAATTTCCATGGG+AGG 0.590708 8_1:-80317850 Msa1217810:CDS
ACACCTTTATATTCAACCCA+AGG 0.592850 8_1:+80317925 None:intergenic
TCCCCAATCCGTACAATGCG+AGG 0.592945 8_1:+80315317 None:intergenic
TGTCTGAAACATCTAAAACA+TGG 0.595405 8_1:+80315267 None:intergenic
CACACTAGAGAAAGGGAAGG+AGG 0.602321 8_1:-80321710 Msa1217810:CDS
GATAATCCGGGCTGTCCCTG+CGG 0.602763 8_1:-80315296 Msa1217810:CDS
GAACTGTTGTTTGAGATCCA+TGG 0.612804 8_1:-80314920 Msa1217810:three_prime_UTR
TGTGCAGGTTGCACTCAGCA+GGG 0.621231 8_1:-80321150 Msa1217810:intron
TTCATACCACCACAAAACAA+TGG 0.628287 8_1:-80314794 Msa1217810:three_prime_UTR
AAAACATGGGTACCGCCGCA+GGG 0.632860 8_1:+80315281 None:intergenic
TTGGATAGGGAGTTGATGGG+AGG 0.650473 8_1:-80321999 Msa1217810:intron
ATGTTGGATAGGGAGTTGAT+GGG 0.656979 8_1:-80322002 Msa1217810:intron
TCTGGAATTGAGTAGTAGGG+TGG 0.675668 8_1:-80322200 Msa1217810:CDS
GGGCACACTAGAGAAAGGGA+AGG 0.695674 8_1:-80321713 Msa1217810:CDS
TGGATTACTATGATGACATG+TGG 0.702198 8_1:-80322147 Msa1217810:CDS
GAAGCTGCTAAGCTTTGCGG+TGG 0.707621 8_1:-80317722 Msa1217810:CDS
TTTGAAGTGAGAGACAAGTG+TGG 0.744281 8_1:+80322108 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATTTTTATTTTTATTT+TGG - chr8_1:80314898-80314917 Msa1217810:intron 0.0%
!!! AATTTTACATATTGTTAAAA+AGG + chr8_1:80317602-80317621 None:intergenic 10.0%
!!! TGTTTTTTCTTTTTTTTCTT+TGG - chr8_1:80315101-80315120 Msa1217810:intron 15.0%
!!! GTTTTTTCTTTTTTTTCTTT+GGG - chr8_1:80315102-80315121 Msa1217810:intron 15.0%
!!! TTTTTTCTTTTTTTTCTTTG+GGG - chr8_1:80315103-80315122 Msa1217810:intron 15.0%
!!! TATGATATTTTGTTTATTCA+TGG - chr8_1:80315135-80315154 Msa1217810:intron 15.0%
!!! TTGTTATTTTATTTTTGTGT+AGG - chr8_1:80315163-80315182 Msa1217810:intron 15.0%
!!! ATTATTATTTTTGTTAGGAT+CGG - chr8_1:80315340-80315359 Msa1217810:intron 15.0%
!! ATTAACATAAAATACATTGT+GGG + chr8_1:80315630-80315649 None:intergenic 15.0%
!! AATTAACATAAAATACATTG+TGG + chr8_1:80315631-80315650 None:intergenic 15.0%
!!! TGATATTGTTTAATTTTATG+CGG - chr8_1:80316173-80316192 Msa1217810:intron 15.0%
!! AAAATTAAACCAATTTATGT+CGG + chr8_1:80316514-80316533 None:intergenic 15.0%
!!! TAGTAATTTGAATATTTTGA+TGG - chr8_1:80317222-80317241 Msa1217810:intron 15.0%
!!! AGTAATTTGAATATTTTGAT+GGG - chr8_1:80317223-80317242 Msa1217810:intron 15.0%
!! TATACATAAATTGAAAGTAA+AGG + chr8_1:80317289-80317308 None:intergenic 15.0%
!! AAACTTAATTAGTTAAGATA+AGG - chr8_1:80317830-80317849 Msa1217810:intron 15.0%
!! GAAATAATCAAATAATAAGT+AGG - chr8_1:80318325-80318344 Msa1217810:intron 15.0%
!!! AAGTTAAGCTTTTATAATAA+AGG - chr8_1:80318667-80318686 Msa1217810:intron 15.0%
!! TATGTGAAAATTATGTTAAA+TGG + chr8_1:80319963-80319982 None:intergenic 15.0%
!!! TAACATAATTTTCACATATA+AGG - chr8_1:80319965-80319984 Msa1217810:intron 15.0%
!!! TATAAATTATGGTTTTAAGT+TGG - chr8_1:80321308-80321327 Msa1217810:intron 15.0%
!!! GAAATTGATTTTATTAAAGT+TGG - chr8_1:80321788-80321807 Msa1217810:intron 15.0%
!!! GATTTTTAAAATTTGTTTCC+TGG - chr8_1:80315364-80315383 Msa1217810:intron 20.0%
!!! AATCAATCTCTTAAAGTTTT+GGG - chr8_1:80315541-80315560 Msa1217810:intron 20.0%
!! AACATACATAAAATACATTG+GGG + chr8_1:80315671-80315690 None:intergenic 20.0%
!! GAACATACATAAAATACATT+GGG + chr8_1:80315672-80315691 None:intergenic 20.0%
!! TGAACATACATAAAATACAT+TGG + chr8_1:80315673-80315692 None:intergenic 20.0%
!!! TTATTCGTTTAACTTCTTTT+CGG + chr8_1:80316035-80316054 None:intergenic 20.0%
!!! TGTTAGATATATTTTGTTGT+TGG + chr8_1:80316135-80316154 None:intergenic 20.0%
!!! GATATTGTTTAATTTTATGC+GGG - chr8_1:80316174-80316193 Msa1217810:intron 20.0%
!!! TTTTCTTTTCAATTTTCCAA+TGG + chr8_1:80316480-80316499 None:intergenic 20.0%
!! TATCGATCATGTATTAATTA+TGG + chr8_1:80316884-80316903 None:intergenic 20.0%
!!! ATTAAAACCACTCAAATTTT+AGG - chr8_1:80317180-80317199 Msa1217810:intron 20.0%
!!! AAATTTTCTCTTTGTGTTTA+AGG + chr8_1:80317559-80317578 None:intergenic 20.0%
!! TTTATCATTAAGTATATCCT+TGG - chr8_1:80317576-80317595 Msa1217810:intron 20.0%
!! TAAAATTGTAAACTGCATTA+TGG - chr8_1:80317615-80317634 Msa1217810:intron 20.0%
!! ATAGTGAAAAGTAAATATGA+AGG - chr8_1:80317941-80317960 Msa1217810:intron 20.0%
!! TAGTGAAAAGTAAATATGAA+GGG - chr8_1:80317942-80317961 Msa1217810:intron 20.0%
!! AAAATTTGCAGGAAAAATAA+TGG + chr8_1:80319848-80319867 None:intergenic 20.0%
!! TTTATCATAAACTATGAAAC+AGG - chr8_1:80320071-80320090 Msa1217810:intron 20.0%
!!! TATAAATTATGGTTTGAAGT+TGG + chr8_1:80321246-80321265 None:intergenic 20.0%
!! TGTGTTAGAGATATAAATTA+TGG + chr8_1:80321235-80321254 None:intergenic 20.0%
!! TGTGTTAGAGATATAAATTA+TGG - chr8_1:80321235-80321254 Msa1217810:intron 20.0%
!!! TATAAATTATGGTTTGAAGT+TGG - chr8_1:80321246-80321265 Msa1217810:intron 20.0%
!! TGTGTTAGAGATATAAATTA+TGG - chr8_1:80321235-80321254 Msa1217810:intron 20.0%
!!! ATGATTGGTTTATATAACTA+CGG - chr8_1:80321351-80321370 Msa1217810:intron 20.0%
!!! AAACACATTTTTTAAAGACT+CGG + chr8_1:80321846-80321865 None:intergenic 20.0%
!!! GTTTTTTTGTCTAATCTTTT+TGG - chr8_1:80321862-80321881 Msa1217810:intron 20.0%
!!! TAGCTTTTTATATCGATTTA+TGG - chr8_1:80322123-80322142 Msa1217810:CDS 20.0%
!!! TTTTCGTTTTGGTTTTGTAT+TGG - chr8_1:80314689-80314708 Msa1217810:three_prime_UTR 25.0%
! TCTAACTATGAGAAAAATGT+TGG - chr8_1:80314924-80314943 Msa1217810:three_prime_UTR 25.0%
! TATGAGAAAAATGTTGGATA+GGG - chr8_1:80314930-80314949 Msa1217810:three_prime_UTR 25.0%
! ACAGGAGAAAATTAAATTCT+AGG - chr8_1:80315276-80315295 Msa1217810:CDS 25.0%
! TATATGACCGATATATAGAA+CGG - chr8_1:80315504-80315523 Msa1217810:intron 25.0%
!! CAATCAATCTCTTAAAGTTT+TGG - chr8_1:80315540-80315559 Msa1217810:intron 25.0%
!! GTAGCAGAATCATAAATTTT+CGG + chr8_1:80315750-80315769 None:intergenic 25.0%
!!! GATATATTTTGTTGTTGGTA+TGG + chr8_1:80316130-80316149 None:intergenic 25.0%
!! TCACTTAAAAGTGTATTATG+TGG + chr8_1:80316378-80316397 None:intergenic 25.0%
! AAAATCAACTAATGAACCAT+TGG - chr8_1:80316461-80316480 Msa1217810:intron 25.0%
!!! GTATTCTATCCTTTTGATTT+TGG + chr8_1:80316572-80316591 None:intergenic 25.0%
! TCAAAAGGATAGAATACAAT+AGG - chr8_1:80316575-80316594 Msa1217810:intron 25.0%
! TTTGTTCTACTGTCTATATA+TGG - chr8_1:80316754-80316773 Msa1217810:intron 25.0%
! TGATATTTGCATCATATCAA+AGG - chr8_1:80316815-80316834 Msa1217810:intron 25.0%
! GATATTTGCATCATATCAAA+GGG - chr8_1:80316816-80316835 Msa1217810:intron 25.0%
! CAACTGCATTTAATTAATGT+AGG + chr8_1:80317349-80317368 None:intergenic 25.0%
!! TCAGCTTTTAACAACTAAAA+GGG + chr8_1:80317529-80317548 None:intergenic 25.0%
!! TTCAGCTTTTAACAACTAAA+AGG + chr8_1:80317530-80317549 None:intergenic 25.0%
!! CAATTAGCTCATTTGTTAAA+AGG + chr8_1:80317656-80317675 None:intergenic 25.0%
! TATTTGTGTACTTTGTCATA+AGG + chr8_1:80317867-80317886 None:intergenic 25.0%
! AGTGAAAAGTAAATATGAAG+GGG - chr8_1:80317943-80317962 Msa1217810:intron 25.0%
! AAAGGAAACTTCATTCTAAA+TGG - chr8_1:80317967-80317986 Msa1217810:intron 25.0%
!! TTATCTCATAAATGGATTTG+TGG + chr8_1:80318045-80318064 None:intergenic 25.0%
! CATCATGTTTATCTCATAAA+TGG + chr8_1:80318053-80318072 None:intergenic 25.0%
!! GATTCATAAATTTGAGGTAT+TGG + chr8_1:80318183-80318202 None:intergenic 25.0%
!! AAAATGAAATCGTTGATTGA+CGG - chr8_1:80318291-80318310 Msa1217810:intron 25.0%
!! GACAATTTCTTGATATGTTT+TGG - chr8_1:80318425-80318444 Msa1217810:intron 25.0%
!!! TTGATATGTTTTGGAATTAG+AGG - chr8_1:80318434-80318453 Msa1217810:intron 25.0%
! ACCAACTCTTCAATTAATAT+AGG + chr8_1:80318490-80318509 None:intergenic 25.0%
! TATATTAATTGAAGAGTTGG+TGG - chr8_1:80318489-80318508 Msa1217810:intron 25.0%
!! ATATTAATTGAAGAGTTGGT+GGG - chr8_1:80318490-80318509 Msa1217810:intron 25.0%
! TCCAATAACTAAACTCAATA+GGG + chr8_1:80318761-80318780 None:intergenic 25.0%
! TTCCAATAACTAAACTCAAT+AGG + chr8_1:80318762-80318781 None:intergenic 25.0%
!! TTATTCTGCATTTCATTTTG+TGG + chr8_1:80319047-80319066 None:intergenic 25.0%
!!! ACAGAAGTGTCAAATATAAA+AGG + chr8_1:80319146-80319165 None:intergenic 25.0%
! TACAGATAATTTATGTGTTC+CGG - chr8_1:80319296-80319315 Msa1217810:intron 25.0%
! TTATCTTACAAGATTCTTTC+TGG - chr8_1:80319369-80319388 Msa1217810:intron 25.0%
! TTGCAATTCAGGATAAATAA+GGG + chr8_1:80319416-80319435 None:intergenic 25.0%
! ATTGCAATTCAGGATAAATA+AGG + chr8_1:80319417-80319436 None:intergenic 25.0%
! CATCAAAAAAATTGCAATTC+AGG + chr8_1:80319427-80319446 None:intergenic 25.0%
! CGAAATAACAGTATTAATGA+AGG - chr8_1:80319493-80319512 Msa1217810:intron 25.0%
! AAACATACAAACAAAAAACC+AGG + chr8_1:80319546-80319565 None:intergenic 25.0%
! GTGAAAATTATGTTAAATGG+AGG + chr8_1:80319960-80319979 None:intergenic 25.0%
! AGTGTACATAAGTATAAGTT+AGG + chr8_1:80320221-80320240 None:intergenic 25.0%
! CTTCTTTATTAGACAAAAAG+GGG + chr8_1:80320384-80320403 None:intergenic 25.0%
! CCTTCTTTATTAGACAAAAA+GGG + chr8_1:80320385-80320404 None:intergenic 25.0%
! ACCTTCTTTATTAGACAAAA+AGG + chr8_1:80320386-80320405 None:intergenic 25.0%
! AATAAAGAAGGTTGAATTAC+TGG - chr8_1:80320394-80320413 Msa1217810:intron 25.0%
! CTTGAGAATAGTTTATAAAG+AGG - chr8_1:80320483-80320502 Msa1217810:intron 25.0%
! CTTGAGAATAGTTTATAAAG+AGG - chr8_1:80320483-80320502 Msa1217810:intron 25.0%
! CTTGAGAATAGTTTATAAAG+AGG - chr8_1:80320483-80320502 Msa1217810:intron 25.0%
!! AATTTAATTTCGTCGATCTA+TGG - chr8_1:80321541-80321560 Msa1217810:intron 25.0%
! TTCAGACATCACAAAAATTA+AGG - chr8_1:80321690-80321709 Msa1217810:CDS 25.0%
CTATGAGAAAAATGTTGGAT+AGG - chr8_1:80314929-80314948 Msa1217810:three_prime_UTR 30.0%
AATGATGTTCGATCAAAAGA+TGG - chr8_1:80315071-80315090 Msa1217810:intron 30.0%
! TTTGTGTAGGTTTTACACTA+CGG - chr8_1:80315176-80315195 Msa1217810:intron 30.0%
GTCATATAGCTTATTCATAG+TGG + chr8_1:80315492-80315511 None:intergenic 30.0%
GATATTTGTCTGCCAAAAAT+TGG - chr8_1:80315824-80315843 Msa1217810:intron 30.0%
! AAATGACCCAATCCAATTTT+TGG + chr8_1:80315839-80315858 None:intergenic 30.0%
!! AAAGCTTACCATTTTTCTGA+TGG - chr8_1:80315869-80315888 Msa1217810:intron 30.0%
!! AAGCTTACCATTTTTCTGAT+GGG - chr8_1:80315870-80315889 Msa1217810:intron 30.0%
TGATATACCCATCAGAAAAA+TGG + chr8_1:80315880-80315899 None:intergenic 30.0%
TACATTCAGTAAGCACAAAA+GGG + chr8_1:80315923-80315942 None:intergenic 30.0%
ATACATTCAGTAAGCACAAA+AGG + chr8_1:80315924-80315943 None:intergenic 30.0%
TATGAACTCATACCCTAAAA+TGG - chr8_1:80315948-80315967 Msa1217810:intron 30.0%
! TGCAATTTGCAACCATTTTA+GGG + chr8_1:80315963-80315982 None:intergenic 30.0%
! TTGCAATTTGCAACCATTTT+AGG + chr8_1:80315964-80315983 None:intergenic 30.0%
!! ATTGTTTAATTTTATGCGGG+AGG - chr8_1:80316177-80316196 Msa1217810:intron 30.0%
TAAAGGAGTTAGATCAAAGA+AGG + chr8_1:80316214-80316233 None:intergenic 30.0%
CCAACTATCAACAAATGTAA+AGG + chr8_1:80316231-80316250 None:intergenic 30.0%
!! CCTTTACATTTGTTGATAGT+TGG - chr8_1:80316228-80316247 Msa1217810:intron 30.0%
AAGTATCTGCCAAAATCAAA+AGG - chr8_1:80316560-80316579 Msa1217810:intron 30.0%
AGAATACAATAGGCTATGAA+AGG - chr8_1:80316585-80316604 Msa1217810:intron 30.0%
! CTTTTGTGTTTTCTGAATCA+AGG - chr8_1:80316608-80316627 Msa1217810:intron 30.0%
AAGGACTTGAGTTTCATATA+TGG - chr8_1:80316627-80316646 Msa1217810:intron 30.0%
TATTCTTCACCAGTTTCTTA+TGG - chr8_1:80316951-80316970 Msa1217810:intron 30.0%
!! TTCAAGTTTTGCCTTCTTAT+AGG + chr8_1:80317042-80317061 None:intergenic 30.0%
GAAATTGCCTAAAATTTGAG+TGG + chr8_1:80317190-80317209 None:intergenic 30.0%
!!! AGGACATCAGTTTTAACTTA+AGG + chr8_1:80317329-80317348 None:intergenic 30.0%
TCTCTTTGTGTTTAAGGATA+TGG + chr8_1:80317553-80317572 None:intergenic 30.0%
ACATATTGTTAAAAAGGCCA+AGG + chr8_1:80317596-80317615 None:intergenic 30.0%
GCATTATGGTAACAATAGAA+TGG - chr8_1:80317629-80317648 Msa1217810:intron 30.0%
! GATTTTCTTCTTCTACATGA+TGG + chr8_1:80317802-80317821 None:intergenic 30.0%
GTGAAAAGTAAATATGAAGG+GGG - chr8_1:80317944-80317963 Msa1217810:intron 30.0%
GAAATGAGTAAGTAAAGAAG+AGG - chr8_1:80318157-80318176 Msa1217810:intron 30.0%
CCATCTGATTCATAAATTTG+AGG + chr8_1:80318189-80318208 None:intergenic 30.0%
CCTCAAATTTATGAATCAGA+TGG - chr8_1:80318186-80318205 Msa1217810:intron 30.0%
! GTCAATCAACGATTTCATTT+TGG + chr8_1:80318292-80318311 None:intergenic 30.0%
! TTTGGAATTAGAGGAAAGAT+TGG - chr8_1:80318443-80318462 Msa1217810:intron 30.0%
TTGGAATTAGAGGAAAGATT+GGG - chr8_1:80318444-80318463 Msa1217810:intron 30.0%
ACTCTTCAATTAATATAGGC+AGG + chr8_1:80318486-80318505 None:intergenic 30.0%
GCCTATATTAATTGAAGAGT+TGG - chr8_1:80318486-80318505 Msa1217810:intron 30.0%
AATCCACATTTAATGATGAG+TGG - chr8_1:80318563-80318582 Msa1217810:intron 30.0%
ATCCACATTTAATGATGAGT+GGG - chr8_1:80318564-80318583 Msa1217810:intron 30.0%
AGGGAAAAATGAAAGTGATT+AGG - chr8_1:80318625-80318644 Msa1217810:intron 30.0%
GGGAAAAATGAAAGTGATTA+GGG - chr8_1:80318626-80318645 Msa1217810:intron 30.0%
TTGAGCATGGTTAATGAATT+AGG + chr8_1:80318697-80318716 None:intergenic 30.0%
ACCCTATTGAGTTTAGTTAT+TGG - chr8_1:80318757-80318776 Msa1217810:intron 30.0%
TAATCATTGCAAGTCTTAGA+GGG + chr8_1:80318841-80318860 None:intergenic 30.0%
GTGAGATAAAAAGACGAATT+CGG + chr8_1:80318864-80318883 None:intergenic 30.0%
!! TTTGCTATTGTATTGTTTCC+AGG - chr8_1:80318994-80319013 Msa1217810:intron 30.0%
TGAAATGCAGAATAAGCAAA+AGG - chr8_1:80319052-80319071 Msa1217810:intron 30.0%
! GCTAATGCTTTAATTTCCAT+GGG - chr8_1:80319089-80319108 Msa1217810:intron 30.0%
! AAATCTTCACCTTGTCATTT+AGG - chr8_1:80319171-80319190 Msa1217810:intron 30.0%
! ATCTTTTATAGACTGACCTT+AGG + chr8_1:80319265-80319284 None:intergenic 30.0%
TTGTAAGATAACAAACTCAC+AGG + chr8_1:80319360-80319379 None:intergenic 30.0%
! AAAAACCAGGAAAGCATAAA+GGG + chr8_1:80319533-80319552 None:intergenic 30.0%
! AAAAAACCAGGAAAGCATAA+AGG + chr8_1:80319534-80319553 None:intergenic 30.0%
TGTTTATGTCAACTAGTACT+TGG - chr8_1:80319561-80319580 Msa1217810:intron 30.0%
ACATAGTGAAACCAATCAAA+CGG + chr8_1:80319595-80319614 None:intergenic 30.0%
TATGTGCATGTATTGTTACT+GGG - chr8_1:80319610-80319629 Msa1217810:intron 30.0%
TATCTGGTACATTTAAGTAG+AGG + chr8_1:80319801-80319820 None:intergenic 30.0%
!!! TCATGTGAGTCATTTTTATC+TGG + chr8_1:80319817-80319836 None:intergenic 30.0%
AGATAAAAATGACTCACATG+AGG - chr8_1:80319816-80319835 Msa1217810:intron 30.0%
TTTGCAGGAAAAATAATGGT+AGG + chr8_1:80319844-80319863 None:intergenic 30.0%
CCTCTGATTGAAAAAATCAT+GGG + chr8_1:80320004-80320023 None:intergenic 30.0%
ATAAACTATGAAACAGGTAG+TGG - chr8_1:80320077-80320096 Msa1217810:intron 30.0%
! ACCTAACACCTTAAACTTTT+CGG - chr8_1:80320294-80320313 Msa1217810:intron 30.0%
AAGATTGTCCGAAAAGTTTA+AGG + chr8_1:80320305-80320324 None:intergenic 30.0%
GAACACTTAGTTATAGAAAC+CGG + chr8_1:80320342-80320361 None:intergenic 30.0%
ATAACTAAGTGTTCAAGAGT+TGG - chr8_1:80320348-80320367 Msa1217810:intron 30.0%
! CCCTTTTTGTCTAATAAAGA+AGG - chr8_1:80320382-80320401 Msa1217810:intron 30.0%
GAGAATAGTTTATAAAGAGG+AGG - chr8_1:80320486-80320505 Msa1217810:intron 30.0%
GAGAATAGTTTATAAAGAGG+AGG - chr8_1:80320486-80320505 Msa1217810:intron 30.0%
GAGAATAGTTTATAAAGAGG+AGG - chr8_1:80320486-80320505 Msa1217810:intron 30.0%
ATACACTGTAAAGAATATCG+AGG + chr8_1:80321002-80321021 None:intergenic 30.0%
!!! GTTTTGGTTTTTCTTTGAGT+TGG - chr8_1:80321274-80321293 Msa1217810:intron 30.0%
!!! TTTTAAGTTGGAACACGTTT+TGG - chr8_1:80321320-80321339 Msa1217810:intron 30.0%
!!! GTTTTGGTTTTTCTGATGAT+TGG - chr8_1:80321336-80321355 Msa1217810:intron 30.0%
ATTAATGCATTAACTCATGC+AGG - chr8_1:80321415-80321434 Msa1217810:intron 30.0%
!!! TTTTAAGTTGGAACACGTTT+TGG - chr8_1:80321320-80321339 Msa1217810:intron 30.0%
!!! GTTTTGGTTTTTCTGATGAT+TGG - chr8_1:80321336-80321355 Msa1217810:intron 30.0%
ATTAATGCATTAACTCATGC+AGG - chr8_1:80321415-80321434 Msa1217810:intron 30.0%
! GTCTGAAACATCTAAAACAT+GGG + chr8_1:80321677-80321696 None:intergenic 30.0%
! TGTCTGAAACATCTAAAACA+TGG + chr8_1:80321678-80321697 None:intergenic 30.0%
ATCACAAAAATTAAGGTGTG+TGG - chr8_1:80321697-80321716 Msa1217810:CDS 30.0%
TTAAAGTTGGAATGAAACCT+TGG - chr8_1:80321801-80321820 Msa1217810:intron 30.0%
TTGATCAGGTTTCTCAAATT+CGG - chr8_1:80321929-80321948 Msa1217810:CDS 30.0%
AATGTCGAATCTTAGTTAAG+TGG - chr8_1:80321982-80322001 Msa1217810:CDS 30.0%
!! ATATAACAGCCATTGTTTTG+TGG + chr8_1:80322160-80322179 None:intergenic 30.0%
TGGCTGTTATATCTATTCAT+AGG - chr8_1:80322168-80322187 Msa1217810:CDS 30.0%
ATTCATAGGCAAACTTTGTA+AGG - chr8_1:80322182-80322201 Msa1217810:CDS 30.0%
CAAACTTTGTAAGGTTTGTA+TGG - chr8_1:80322191-80322210 Msa1217810:CDS 30.0%
! TCATAGTAATCCAGCTTTGT+GGG + chr8_1:80314788-80314807 None:intergenic 35.0%
ATCATAGTAATCCAGCTTTG+TGG + chr8_1:80314789-80314808 None:intergenic 35.0%
TGGATTACTATGATGACATG+TGG - chr8_1:80314795-80314814 Msa1217810:three_prime_UTR 35.0%
!!! GGCATGTTTTGATATTGGAT+CGG - chr8_1:80314964-80314983 Msa1217810:exon 35.0%
! ACTATTTTCTATCCACAAGG+TGG - chr8_1:80314987-80315006 Msa1217810:CDS 35.0%
!! TTTACACTACGGTGTTTTTG+AGG - chr8_1:80315187-80315206 Msa1217810:intron 35.0%
!! TTACACTACGGTGTTTTTGA+GGG - chr8_1:80315188-80315207 Msa1217810:intron 35.0%
AGAACAACTATAGTGCTTTG+TGG + chr8_1:80315401-80315420 None:intergenic 35.0%
!! GCTTATTCATAGTGGATGTT+AGG + chr8_1:80315484-80315503 None:intergenic 35.0%
TGAGTCACCGTTCTATATAT+CGG + chr8_1:80315514-80315533 None:intergenic 35.0%
!!! ATCTCTTAAAGTTTTGGGTG+AGG - chr8_1:80315546-80315565 Msa1217810:intron 35.0%
GCAACAACAGATTAATGATC+AGG + chr8_1:80315598-80315617 None:intergenic 35.0%
ATTCATCTCGTTATTTGTGC+AGG - chr8_1:80315777-80315796 Msa1217810:intron 35.0%
TTGTCTGCCAAAAATTGGAT+TGG - chr8_1:80315829-80315848 Msa1217810:intron 35.0%
TGTCTGCCAAAAATTGGATT+GGG - chr8_1:80315830-80315849 Msa1217810:intron 35.0%
! GAAAAATGGTAAGCTTTTCC+AGG + chr8_1:80315866-80315885 None:intergenic 35.0%
!! CGTTTAACTTCTTTTCGGTA+GGG + chr8_1:80316030-80316049 None:intergenic 35.0%
!! TCGTTTAACTTCTTTTCGGT+AGG + chr8_1:80316031-80316050 None:intergenic 35.0%
GTTAGATCAAAGAAGGTAGA+AGG + chr8_1:80316207-80316226 None:intergenic 35.0%
TTGTTCATCTTTCTTGCAAG+TGG + chr8_1:80316257-80316276 None:intergenic 35.0%
GAACCAATAATGATGCAGTT+TGG - chr8_1:80316278-80316297 Msa1217810:intron 35.0%
AAGCCAAACTGCATCATTAT+TGG + chr8_1:80316284-80316303 None:intergenic 35.0%
! CCTCTGATTTTTCTTCTACA+TGG + chr8_1:80316439-80316458 None:intergenic 35.0%
CCATGTAGAAGAAAAATCAG+AGG - chr8_1:80316436-80316455 Msa1217810:intron 35.0%
! TATGATTGCAAGTGCGTTTT+TGG - chr8_1:80316671-80316690 Msa1217810:intron 35.0%
! TATGCATGTGCTGAATGTTT+TGG + chr8_1:80316845-80316864 None:intergenic 35.0%
AACCCTCTACATGATTAGAT+GGG - chr8_1:80316921-80316940 Msa1217810:intron 35.0%
TTAAGCCTACCATAAGAAAC+TGG + chr8_1:80316963-80316982 None:intergenic 35.0%
AGAAGACTCTCAATGATGTT+AGG + chr8_1:80317019-80317038 None:intergenic 35.0%
! TATGCTCCAGTACATTTTCT+AGG - chr8_1:80317098-80317117 Msa1217810:intron 35.0%
! ATGCTCCAGTACATTTTCTA+GGG - chr8_1:80317099-80317118 Msa1217810:intron 35.0%
ACATCCTCTTGTGTAAAAAC+AGG - chr8_1:80317423-80317442 Msa1217810:intron 35.0%
CATCCTCTTGTGTAAAAACA+GGG - chr8_1:80317424-80317443 Msa1217810:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr8_1:80317430-80317449 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr8_1:80317429-80317448 Msa1217810:intron 35.0%
TGTGTACTTTGTCATAAGGT+AGG + chr8_1:80317863-80317882 None:intergenic 35.0%
AAGTAAATATGAAGGGGGAA+AGG - chr8_1:80317949-80317968 Msa1217810:intron 35.0%
AAATGTTGCACGCAATAATG+AGG - chr8_1:80318103-80318122 Msa1217810:intron 35.0%
AAATCAACAATGACAGCCTA+AGG - chr8_1:80318355-80318374 Msa1217810:intron 35.0%
TGCAATAGCTTAACACTTCT+CGG + chr8_1:80318537-80318556 None:intergenic 35.0%
TACCCACTCATCATTAAATG+TGG + chr8_1:80318569-80318588 None:intergenic 35.0%
TTTAATGATGAGTGGGTAGT+TGG - chr8_1:80318571-80318590 Msa1217810:intron 35.0%
TTAATGATGAGTGGGTAGTT+GGG - chr8_1:80318572-80318591 Msa1217810:intron 35.0%
! AAAAGCTTAACTTGATGTGC+TGG + chr8_1:80318660-80318679 None:intergenic 35.0%
AAGTCTTAGAGGGACTAATT+TGG + chr8_1:80318831-80318850 None:intergenic 35.0%
GTAATCATTGCAAGTCTTAG+AGG + chr8_1:80318842-80318861 None:intergenic 35.0%
! ATTTTGAACAGAAGTCTCGT+GGG + chr8_1:80318943-80318962 None:intergenic 35.0%
! AATTTTGAACAGAAGTCTCG+TGG + chr8_1:80318944-80318963 None:intergenic 35.0%
ACACCTTTATATTCAACCCA+AGG + chr8_1:80319020-80319039 None:intergenic 35.0%
! GGCTAATGCTTTAATTTCCA+TGG - chr8_1:80319088-80319107 Msa1217810:intron 35.0%
! AATGCTTTAATTTCCATGGG+AGG - chr8_1:80319092-80319111 Msa1217810:intron 35.0%
!! TTAACTTACTTTTCCTCCCA+TGG + chr8_1:80319108-80319127 None:intergenic 35.0%
TCTTCCTGATTATGTTCCTA+AGG - chr8_1:80319246-80319265 Msa1217810:intron 35.0%
TGTTGTAACCAAACCAATAC+AGG - chr8_1:80319470-80319489 Msa1217810:intron 35.0%
!! TTATTTCGCCTGTATTGGTT+TGG + chr8_1:80319481-80319500 None:intergenic 35.0%
!! TACTGTTATTTCGCCTGTAT+TGG + chr8_1:80319486-80319505 None:intergenic 35.0%
CTATGTGCATGTATTGTTAC+TGG - chr8_1:80319609-80319628 Msa1217810:intron 35.0%
ATGTGCATGTATTGTTACTG+GGG - chr8_1:80319611-80319630 Msa1217810:intron 35.0%
GGTACATTTAAGTAGAGGTA+GGG + chr8_1:80319796-80319815 None:intergenic 35.0%
TGGTACATTTAAGTAGAGGT+AGG + chr8_1:80319797-80319816 None:intergenic 35.0%
GCATCAAAATAATAGAGGTG+AGG + chr8_1:80319875-80319894 None:intergenic 35.0%
!!! ACCTCTATTATTTTGATGCC+TGG - chr8_1:80319876-80319895 Msa1217810:intron 35.0%
! CTTTATGTGCAATTTTTGCC+AGG + chr8_1:80319897-80319916 None:intergenic 35.0%
ATCTGTTCCCACTAATTTCA+TGG - chr8_1:80319929-80319948 Msa1217810:intron 35.0%
! TTTTCACATATAAGGCCTTC+TGG - chr8_1:80319973-80319992 Msa1217810:intron 35.0%
!!! CCCATGATTTTTTCAATCAG+AGG - chr8_1:80320001-80320020 Msa1217810:intron 35.0%
GCCTCTGATTGAAAAAATCA+TGG + chr8_1:80320005-80320024 None:intergenic 35.0%
ATTAAGCCTAAAGCCATGTA+AGG + chr8_1:80320027-80320046 None:intergenic 35.0%
CTTTAGGCTTAATCTTACGA+AGG - chr8_1:80320034-80320053 Msa1217810:intron 35.0%
!! AGGTAGTGGTAAGCATTTTT+AGG - chr8_1:80320091-80320110 Msa1217810:intron 35.0%
!! AATGACAGTAGCTTTGGTAA+TGG + chr8_1:80320131-80320150 None:intergenic 35.0%
! TCCGAAAAGTTTAAGGTGTT+AGG + chr8_1:80320298-80320317 None:intergenic 35.0%
! CGGACAATCTTTTCATAAAG+CGG - chr8_1:80320314-80320333 Msa1217810:intron 35.0%
AAAGAAGGTTGAATTACTGG+TGG - chr8_1:80320397-80320416 Msa1217810:intron 35.0%
GAATCCTATCTATCTGATGT+GGG + chr8_1:80320464-80320483 None:intergenic 35.0%
AGAATCCTATCTATCTGATG+TGG + chr8_1:80320465-80320484 None:intergenic 35.0%
ATACCATGTAACGAATATCG+AGG + chr8_1:80320554-80320573 None:intergenic 35.0%
ATACCATGTAACGAATATCG+AGG + chr8_1:80320554-80320573 None:intergenic 35.0%
TTTACAGTGTATTGTCCACA+CGG - chr8_1:80321010-80321029 Msa1217810:intron 35.0%
!! TTTGAAGTTGGAACACGTTT+TGG + chr8_1:80321258-80321277 None:intergenic 35.0%
!! TTTGAAGTTGGAACACGTTT+TGG - chr8_1:80321258-80321277 Msa1217810:intron 35.0%
ATATAACTACGGTCGATCTA+TGG - chr8_1:80321362-80321381 Msa1217810:intron 35.0%
!!! TAATCCGGATGGTTTTAAGT+TGG - chr8_1:80321469-80321488 Msa1217810:intron 35.0%
TGTTCCAACTTAAAACCATC+CGG + chr8_1:80321476-80321495 None:intergenic 35.0%
GATAAGTCTCTTAACTACCA+AGG + chr8_1:80321821-80321840 None:intergenic 35.0%
AGTTACCTGTGTATTTGATC+AGG - chr8_1:80321915-80321934 Msa1217810:CDS 35.0%
AGAAACCTGATCAAATACAC+AGG + chr8_1:80321923-80321942 None:intergenic 35.0%
TTCTCAAATTCGGTCAAAGA+AGG - chr8_1:80321939-80321958 Msa1217810:CDS 35.0%
TCTCAAATTCGGTCAAAGAA+GGG - chr8_1:80321940-80321959 Msa1217810:CDS 35.0%
TTCATACCACCACAAAACAA+TGG - chr8_1:80322148-80322167 Msa1217810:CDS 35.0%
CTACTACTCAATTCCAGAAG+CGG + chr8_1:80314740-80314759 None:intergenic 40.0%
!! GCTTCTGGAATTGAGTAGTA+GGG - chr8_1:80314739-80314758 Msa1217810:three_prime_UTR 40.0%
! TTTGAAGTGAGAGACAAGTG+TGG + chr8_1:80314837-80314856 None:intergenic 40.0%
AATGTTGGATAGGGAGTTGA+TGG - chr8_1:80314939-80314958 Msa1217810:three_prime_UTR 40.0%
! ATGTTGGATAGGGAGTTGAT+GGG - chr8_1:80314940-80314959 Msa1217810:three_prime_UTR 40.0%
!!! TGGGAGGCATGTTTTGATAT+TGG - chr8_1:80314959-80314978 Msa1217810:exon 40.0%
! CGGACTATTTTCTATCCACA+AGG - chr8_1:80314984-80315003 Msa1217810:CDS 40.0%
! ATTTTCTATCCACAAGGTGG+TGG - chr8_1:80314990-80315009 Msa1217810:CDS 40.0%
ATTAAGAATCCAGTGTCTGC+CGG + chr8_1:80315020-80315039 None:intergenic 40.0%
!! TACGGTGTTTTTGAGGGTAT+GGG - chr8_1:80315194-80315213 Msa1217810:intron 40.0%
! CACTATCTGTTGATGAGAAC+AGG - chr8_1:80315258-80315277 Msa1217810:CDS 40.0%
!!! GTGATGTCCTGGTTTTTTGA+TGG - chr8_1:80315571-80315590 Msa1217810:intron 40.0%
ATCAGGACCATCAAAAAACC+AGG + chr8_1:80315581-80315600 None:intergenic 40.0%
CACACTCATCCGACATAAAT+TGG - chr8_1:80316502-80316521 Msa1217810:intron 40.0%
CTAATCATGTAGAGGGTTGA+TGG + chr8_1:80316919-80316938 None:intergenic 40.0%
CAACCCTCTACATGATTAGA+TGG - chr8_1:80316920-80316939 Msa1217810:intron 40.0%
ACCCTCTACATGATTAGATG+GGG - chr8_1:80316922-80316941 Msa1217810:intron 40.0%
CTTCACCAGTTTCTTATGGT+AGG - chr8_1:80316955-80316974 Msa1217810:intron 40.0%
GAGAGTCTTCTCCTATAAGA+AGG - chr8_1:80317028-80317047 Msa1217810:intron 40.0%
TTCCTCCCTAGAAAATGTAC+TGG + chr8_1:80317107-80317126 None:intergenic 40.0%
GTCATGTGACTGTAATGTCA+CGG - chr8_1:80317385-80317404 Msa1217810:intron 40.0%
TCATGTGACTGTAATGTCAC+GGG - chr8_1:80317386-80317405 Msa1217810:intron 40.0%
TTACACAAGAGGATGTTTCC+AGG + chr8_1:80317419-80317438 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG - chr8_1:80317455-80317474 Msa1217810:intron 40.0%
TAACAACTAAAAGGGCAACC+TGG + chr8_1:80317521-80317540 None:intergenic 40.0%
TATTGTGCAGGATCTGAGAA+AGG + chr8_1:80318236-80318255 None:intergenic 40.0%
! ATGAAATCGTTGATTGACGG+AGG - chr8_1:80318294-80318313 Msa1217810:intron 40.0%
!!! AGAGTGGAGGTTTTGAATAG+CGG - chr8_1:80318403-80318422 Msa1217810:intron 40.0%
AAAGATTGGGAGAAGATGCA+TGG - chr8_1:80318457-80318476 Msa1217810:intron 40.0%
!! TTAATTGAAGAGTTGGTGGG+TGG - chr8_1:80318493-80318512 Msa1217810:intron 40.0%
!! CATTTAAGGCTAGCTTAGGA+GGG - chr8_1:80318606-80318625 Msa1217810:intron 40.0%
!! ATGCAACATTGACTTGAGCA+TGG + chr8_1:80318710-80318729 None:intergenic 40.0%
! AAACAACACGAGACTAGTCA+AGG + chr8_1:80318916-80318935 None:intergenic 40.0%
ATTGTATTGTTTCCAGGCCT+TGG - chr8_1:80319000-80319019 Msa1217810:intron 40.0%
TTGTATTGTTTCCAGGCCTT+GGG - chr8_1:80319001-80319020 Msa1217810:intron 40.0%
TTTATATTCAACCCAAGGCC+TGG + chr8_1:80319015-80319034 None:intergenic 40.0%
!! AGGCCTTGGGTTGAATATAA+AGG - chr8_1:80319014-80319033 Msa1217810:intron 40.0%
GCAGAATAAGCAAAAGGAGT+TGG - chr8_1:80319058-80319077 Msa1217810:intron 40.0%
CAGCAGAAACCTAAATGACA+AGG + chr8_1:80319183-80319202 None:intergenic 40.0%
CTGACCTTAGGAACATAATC+AGG + chr8_1:80319253-80319272 None:intergenic 40.0%
TCAAAACCAGCAACTAGTTC+CGG + chr8_1:80319318-80319337 None:intergenic 40.0%
! TTTTGACATAACTGTGCTGC+TGG - chr8_1:80319332-80319351 Msa1217810:intron 40.0%
!! ATTGGTTTGGTTACAACAGC+TGG + chr8_1:80319468-80319487 None:intergenic 40.0%
! GTTTTCCCTTTATGCTTTCC+TGG - chr8_1:80319525-80319544 Msa1217810:intron 40.0%
TGGTAGTATCTCCGTTTGAT+TGG - chr8_1:80319581-80319600 Msa1217810:intron 40.0%
GGGATATGTATGAGACTTCT+TGG + chr8_1:80319762-80319781 None:intergenic 40.0%
GAGGTAGGGAAATAATCAGT+GGG + chr8_1:80319782-80319801 None:intergenic 40.0%
AGAGGTAGGGAAATAATCAG+TGG + chr8_1:80319783-80319802 None:intergenic 40.0%
GGTGAGGCAATAAAATTTGC+AGG + chr8_1:80319859-80319878 None:intergenic 40.0%
GCCAGGCATCAAAATAATAG+AGG + chr8_1:80319880-80319899 None:intergenic 40.0%
GGTGAGACCATGAAATTAGT+GGG + chr8_1:80319939-80319958 None:intergenic 40.0%
AGGTGAGACCATGAAATTAG+TGG + chr8_1:80319940-80319959 None:intergenic 40.0%
TTTCAATCAGAGGCCTTACA+TGG - chr8_1:80320011-80320030 Msa1217810:intron 40.0%
ACAAGCAATGACAGTAGCTT+TGG + chr8_1:80320137-80320156 None:intergenic 40.0%
GTTATCTGCTATTGTAGAGC+TGG - chr8_1:80320161-80320180 Msa1217810:intron 40.0%
! ATCTTTTCATAAAGCGGTGC+CGG - chr8_1:80320320-80320339 Msa1217810:intron 40.0%
TAGTCCCACATCAGATAGAT+AGG - chr8_1:80320457-80320476 Msa1217810:intron 40.0%
CTAACTCATCCCTACAAAAC+CGG + chr8_1:80320530-80320549 None:intergenic 40.0%
TACATGGTATCAGAGCCTAT+CGG - chr8_1:80320564-80320583 Msa1217810:intron 40.0%
GAATCCTATCTATCCGATGT+GGG + chr8_1:80320688-80320707 None:intergenic 40.0%
AGAATCCTATCTATCCGATG+TGG + chr8_1:80320689-80320708 None:intergenic 40.0%
CTAACTCATCCCTACAAAAC+CGG + chr8_1:80320530-80320549 None:intergenic 40.0%
TACATGGTATCAGAGCCTAT+CGG - chr8_1:80320564-80320583 Msa1217810:intron 40.0%
GAATCCTATCTATCCGATGT+GGG + chr8_1:80320688-80320707 None:intergenic 40.0%
AGAATCCTATCTATCCGATG+TGG + chr8_1:80320689-80320708 None:intergenic 40.0%
CTAACTCATCCCTACAAAAC+CGG + chr8_1:80320530-80320549 None:intergenic 40.0%
TTACAGTGTATTGTCCACAC+GGG - chr8_1:80321011-80321030 Msa1217810:intron 40.0%
!!! CGTTTTGGTTTTGCTTGAGT+TGG + chr8_1:80321044-80321063 None:intergenic 40.0%
! GAACTGTTGTTTGAGATCCA+TGG - chr8_1:80322022-80322041 Msa1217810:intron 40.0%
!! TAACAGCCATTGTTTTGTGG+TGG + chr8_1:80322157-80322176 None:intergenic 40.0%
!! CGCTTCTGGAATTGAGTAGT+AGG - chr8_1:80314738-80314757 Msa1217810:three_prime_UTR 45.0%
! TCTGGAATTGAGTAGTAGGG+TGG - chr8_1:80314742-80314761 Msa1217810:three_prime_UTR 45.0%
!! CTACGGTGTTTTTGAGGGTA+TGG - chr8_1:80315193-80315212 Msa1217810:intron 45.0%
!! GTGTTTTTGAGGGTATGGGA+GGG - chr8_1:80315198-80315217 Msa1217810:intron 45.0%
!! TGTTTTTGAGGGTATGGGAG+GGG - chr8_1:80315199-80315218 Msa1217810:intron 45.0%
! TTTGAGGGCACACTAGAGAA+AGG - chr8_1:80315224-80315243 Msa1217810:intron 45.0%
! TTGAGGGCACACTAGAGAAA+GGG - chr8_1:80315225-80315244 Msa1217810:intron 45.0%
TTTGTGGCAGAAGAACTTCC+AGG + chr8_1:80315385-80315404 None:intergenic 45.0%
ACATTGGGGAGTCTGAAAAG+CGG + chr8_1:80315657-80315676 None:intergenic 45.0%
!! TCATGTAGAGGGTTGATGGT+TGG + chr8_1:80316915-80316934 None:intergenic 45.0%
CCCCCATCTAATCATGTAGA+GGG + chr8_1:80316926-80316945 None:intergenic 45.0%
CCCTCTACATGATTAGATGG+GGG - chr8_1:80316923-80316942 Msa1217810:intron 45.0%
CCTCTACATGATTAGATGGG+GGG - chr8_1:80316924-80316943 Msa1217810:intron 45.0%
!! CTCCAGTACATTTTCTAGGG+AGG - chr8_1:80317102-80317121 Msa1217810:intron 45.0%
GCTGCGTACAATACACCAAA+TGG - chr8_1:80317451-80317470 Msa1217810:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr8_1:80317454-80317473 Msa1217810:intron 45.0%
! TCTTTGTGCTGCTATTGTGC+AGG + chr8_1:80318248-80318267 None:intergenic 45.0%
TTGATTGACGGAGGAGAAAG+AGG - chr8_1:80318303-80318322 Msa1217810:intron 45.0%
!!! AGTTTTGAGGAGCTCAAGAG+TGG - chr8_1:80318387-80318406 Msa1217810:intron 45.0%
GGGAGGTTAAGTCGCATTTA+AGG - chr8_1:80318592-80318611 Msa1217810:intron 45.0%
!! GTCGCATTTAAGGCTAGCTT+AGG - chr8_1:80318602-80318621 Msa1217810:intron 45.0%
!! GCATTTAAGGCTAGCTTAGG+AGG - chr8_1:80318605-80318624 Msa1217810:intron 45.0%
! CACGAGACTAGTCAAGGTTA+TGG + chr8_1:80318910-80318929 None:intergenic 45.0%
GCAAAAGGAGTTGGAGTTAG+AGG - chr8_1:80319067-80319086 Msa1217810:intron 45.0%
GATGAAGCTGCTAAGCTTTG+CGG - chr8_1:80319217-80319236 Msa1217810:intron 45.0%
CTTCTTGGAGTTGAAGCCTA+AGG + chr8_1:80319747-80319766 None:intergenic 45.0%
AAATCATGGGAGAAGCCAGA+AGG + chr8_1:80319991-80320010 None:intergenic 45.0%
! GCTACTGTCATTGCTTGTTG+TGG - chr8_1:80320139-80320158 Msa1217810:intron 45.0%
ATCTGCTATTGTAGAGCTGG+AGG - chr8_1:80320164-80320183 Msa1217810:intron 45.0%
GGTGGACATGTGTATGTTAG+CGG - chr8_1:80320415-80320434 Msa1217810:intron 45.0%
!! CGGTTTTGTAGGGATGAGTT+AGG - chr8_1:80320528-80320547 Msa1217810:intron 45.0%
AGGCCTCGATATTCGTTACA+TGG - chr8_1:80320548-80320567 Msa1217810:intron 45.0%
ACATGGTATCAGAGCCTATC+GGG - chr8_1:80320565-80320584 Msa1217810:intron 45.0%
TAGTCCCACATCGGATAGAT+AGG - chr8_1:80320681-80320700 Msa1217810:intron 45.0%
!! CGGTTTTGTAGGGATGAGTT+AGG - chr8_1:80320528-80320547 Msa1217810:intron 45.0%
AGGCCTCGATATTCGTTACA+TGG - chr8_1:80320548-80320567 Msa1217810:intron 45.0%
ACATGGTATCAGAGCCTATC+GGG - chr8_1:80320565-80320584 Msa1217810:intron 45.0%
TAGTCCCACATCGGATAGAT+AGG - chr8_1:80320681-80320700 Msa1217810:intron 45.0%
!! CGGTTTTGTAGGGATGAGTT+AGG - chr8_1:80320528-80320547 Msa1217810:intron 45.0%
AACTCAAGCAAGAGCCCTTT+GGG - chr8_1:80321104-80321123 Msa1217810:CDS 45.0%
! GAGTTGGTTTCAAGCCCAAA+GGG + chr8_1:80321196-80321215 None:intergenic 45.0%
!! TGAGTTGGTTTCAAGCCCAA+AGG + chr8_1:80321195-80321214 None:intergenic 45.0%
AACTCAAGCAAGAGCCCTTT+GGG - chr8_1:80321104-80321123 Msa1217810:CDS 45.0%
AACTCAAGCAAGAGCCCTTT+GGG + chr8_1:80321104-80321123 None:intergenic 45.0%
!! TGAGTTGGTTTCAAGCCCAA+AGG - chr8_1:80321195-80321214 Msa1217810:intron 45.0%
! GAGTTGGTTTCAAGCCCAAA+GGG - chr8_1:80321196-80321215 Msa1217810:intron 45.0%
AACTCAAGCAAGAGCCCTTT+GGG + chr8_1:80321104-80321123 None:intergenic 45.0%
AAAGCACACCTCGCATTGTA+CGG - chr8_1:80321438-80321457 Msa1217810:intron 45.0%
!! TGTACGGATTGGGGATAATC+CGG - chr8_1:80321454-80321473 Msa1217810:intron 45.0%
AAAGCACACCTCGCATTGTA+CGG - chr8_1:80321438-80321457 Msa1217810:intron 45.0%
!! TGTACGGATTGGGGATAATC+CGG - chr8_1:80321454-80321473 Msa1217810:intron 45.0%
!!! TTATTATTATTATTTTTGTT+AGG - chr8_1:80315335-80315354 Msa1217810:intron 5.0%
GGAATTGAGTAGTAGGGTGG+TGG - chr8_1:80314745-80314764 Msa1217810:three_prime_UTR 50.0%
! ATTGAGTAGTAGGGTGGTGG+TGG - chr8_1:80314748-80314767 Msa1217810:three_prime_UTR 50.0%
!! TTGGATAGGGAGTTGATGGG+AGG - chr8_1:80314943-80314962 Msa1217810:three_prime_UTR 50.0%
!! GGTGTTTTTGAGGGTATGGG+AGG - chr8_1:80315197-80315216 Msa1217810:intron 50.0%
CACACTAGAGAAAGGGAAGG+AGG - chr8_1:80315232-80315251 Msa1217810:intron 50.0%
! GGATTGGGTCATTTAGAGCC+TGG - chr8_1:80315845-80315864 Msa1217810:intron 50.0%
CCCCCCATCTAATCATGTAG+AGG + chr8_1:80316927-80316946 None:intergenic 50.0%
AATGTCACGGGTTCAAGTCC+TGG - chr8_1:80317398-80317417 Msa1217810:intron 50.0%
TGCGTGCAACATTTCTGTCG+TGG + chr8_1:80318097-80318116 None:intergenic 50.0%
TGAGCTCCTCAAAACTCCCT+CGG + chr8_1:80318383-80318402 None:intergenic 50.0%
TTTGAGGAGCTCAAGAGTGG+AGG - chr8_1:80318390-80318409 Msa1217810:intron 50.0%
GGTGGCTATGAGAAGTGGAA+AGG - chr8_1:80318511-80318530 Msa1217810:intron 50.0%
ATGATGAGTGGGTAGTTGGG+AGG - chr8_1:80318575-80318594 Msa1217810:intron 50.0%
TGTGTTCCGGAACTAGTTGC+TGG - chr8_1:80319309-80319328 Msa1217810:intron 50.0%
TGGAGTTGAAGCCTAAGGCA+AGG + chr8_1:80319742-80319761 None:intergenic 50.0%
CAGAGGCCTTACATGGCTTT+AGG - chr8_1:80320018-80320037 Msa1217810:intron 50.0%
GTATGTTAGCGGCCAACACT+CGG - chr8_1:80320426-80320445 Msa1217810:intron 50.0%
TATGTTAGCGGCCAACACTC+GGG - chr8_1:80320427-80320446 Msa1217810:intron 50.0%
ACTAAATCCCACCCGAGTGT+TGG + chr8_1:80320441-80320460 None:intergenic 50.0%
!! ACCGTACAAGCCGGTTTTGT+AGG - chr8_1:80320517-80320536 Msa1217810:intron 50.0%
!! CCCTACAAAACCGGCTTGTA+CGG + chr8_1:80320521-80320540 None:intergenic 50.0%
!! CCGTACAAGCCGGTTTTGTA+GGG - chr8_1:80320518-80320537 Msa1217810:intron 50.0%
ACGCTTTAGCCCAGCCAAAT+GGG + chr8_1:80320624-80320643 None:intergenic 50.0%
ACTAAATCCCACCCGAGTGT+AGG + chr8_1:80320441-80320460 None:intergenic 50.0%
GGTGGGATTTAGTCCCACAT+CGG - chr8_1:80320448-80320467 Msa1217810:intron 50.0%
!! ACCGTACAAGCCGGTTTTGT+AGG - chr8_1:80320517-80320536 Msa1217810:intron 50.0%
!! CCCTACAAAACCGGCTTGTA+CGG + chr8_1:80320521-80320540 None:intergenic 50.0%
!! CCGTACAAGCCGGTTTTGTA+GGG - chr8_1:80320518-80320537 Msa1217810:intron 50.0%
ACGCTTTAGCCCAGCCAAAT+GGG + chr8_1:80320624-80320643 None:intergenic 50.0%
ACTAAATCCCACCCGAGTGT+AGG + chr8_1:80320441-80320460 None:intergenic 50.0%
GGTGGGATTTAGTCCCACAT+CGG - chr8_1:80320448-80320467 Msa1217810:intron 50.0%
!! ACCGTACAAGCCGGTTTTGT+AGG - chr8_1:80320517-80320536 Msa1217810:intron 50.0%
!! CCCTACAAAACCGGCTTGTA+CGG + chr8_1:80320521-80320540 None:intergenic 50.0%
!! CCGTACAAGCCGGTTTTGTA+GGG - chr8_1:80320518-80320537 Msa1217810:intron 50.0%
CAAAGGGCTCTTGCTTGAGT+TGG + chr8_1:80321180-80321199 None:intergenic 50.0%
CAACTCAAGCAAGAGCCCTT+TGG - chr8_1:80321103-80321122 Msa1217810:CDS 50.0%
CAAAGGGCTCTTGCTTGAGT+TGG + chr8_1:80321180-80321199 None:intergenic 50.0%
CAACTCAAGCAAGAGCCCTT+TGG - chr8_1:80321103-80321122 Msa1217810:CDS 50.0%
TTCAAGCCCACAAGCCCAAA+GGG + chr8_1:80321153-80321172 None:intergenic 50.0%
TTTCAAGCCCACAAGCCCAA+AGG + chr8_1:80321154-80321173 None:intergenic 50.0%
TGGGCTTGAAACAAGCCCAA+AGG - chr8_1:80321163-80321182 Msa1217810:intron 50.0%
GGGCTTGAAACAAGCCCAAA+GGG - chr8_1:80321164-80321183 Msa1217810:intron 50.0%
CAACTCAAGCAAGAGCCCTT+TGG + chr8_1:80321103-80321122 None:intergenic 50.0%
CAAAGGGCTCTTGCTTGAGT+TGG - chr8_1:80321180-80321199 Msa1217810:intron 50.0%
CAACTCAAGCAAGAGCCCTT+TGG + chr8_1:80321103-80321122 None:intergenic 50.0%
CAAAGGGCTCTTGCTTGAGT+TGG - chr8_1:80321180-80321199 Msa1217810:intron 50.0%
ACACCTCGCATTGTACGGAT+TGG - chr8_1:80321443-80321462 Msa1217810:intron 50.0%
CACCTCGCATTGTACGGATT+GGG - chr8_1:80321444-80321463 Msa1217810:intron 50.0%
! ACCTCGCATTGTACGGATTG+GGG - chr8_1:80321445-80321464 Msa1217810:intron 50.0%
ACACCTCGCATTGTACGGAT+TGG - chr8_1:80321443-80321462 Msa1217810:intron 50.0%
CACCTCGCATTGTACGGATT+GGG - chr8_1:80321444-80321463 Msa1217810:intron 50.0%
! ACCTCGCATTGTACGGATTG+GGG - chr8_1:80321445-80321464 Msa1217810:intron 50.0%
!! GTACGGATTGGGGATAATCC+GGG - chr8_1:80321455-80321474 Msa1217810:intron 50.0%
!! TAGTAGGGTGGTGGTGGAGA+TGG - chr8_1:80314754-80314773 Msa1217810:three_prime_UTR 55.0%
GGACAAGAGTCCCACAAAGC+TGG - chr8_1:80314775-80314794 Msa1217810:three_prime_UTR 55.0%
GGTATGGGAGGGGAGTTTGA+GGG - chr8_1:80315209-80315228 Msa1217810:intron 55.0%
GGGCACACTAGAGAAAGGGA+AGG - chr8_1:80315229-80315248 Msa1217810:intron 55.0%
TGGGTGAGGATGTGATGTCC+TGG - chr8_1:80315560-80315579 Msa1217810:intron 55.0%
TTGTGCAGGTTGCACTCAGC+AGG - chr8_1:80315791-80315810 Msa1217810:intron 55.0%
TGTGCAGGTTGCACTCAGCA+GGG - chr8_1:80315792-80315811 Msa1217810:intron 55.0%
AATGACAGCCTAAGGAGCCG+AGG - chr8_1:80318363-80318382 Msa1217810:intron 55.0%
ATGACAGCCTAAGGAGCCGA+GGG - chr8_1:80318364-80318383 Msa1217810:intron 55.0%
CAAAACTCCCTCGGCTCCTT+AGG + chr8_1:80318374-80318393 None:intergenic 55.0%
! AAGGAGCCGAGGGAGTTTTG+AGG - chr8_1:80318374-80318393 Msa1217810:intron 55.0%
! TGGTGGGTGGCTATGAGAAG+TGG - chr8_1:80318506-80318525 Msa1217810:intron 55.0%
GAAGCTGCTAAGCTTTGCGG+TGG - chr8_1:80319220-80319239 Msa1217810:intron 55.0%
AGCAGAACCAGCCTTGCCTT+AGG - chr8_1:80319728-80319747 Msa1217810:intron 55.0%
GTTGAAGCCTAAGGCAAGGC+TGG + chr8_1:80319738-80319757 None:intergenic 55.0%
GCAATCCTCACCGTACAAGC+CGG - chr8_1:80320508-80320527 Msa1217810:intron 55.0%
!! CAAAACCGGCTTGTACGGTG+AGG + chr8_1:80320516-80320535 None:intergenic 55.0%
AGCCTATCGGGTCCATCGTT+GGG - chr8_1:80320577-80320596 Msa1217810:intron 55.0%
TGGAGATGCAAGCCCAACGA+TGG + chr8_1:80320592-80320611 None:intergenic 55.0%
CACGCTTTAGCCCAGCCAAA+TGG + chr8_1:80320625-80320644 None:intergenic 55.0%
TTTGGCTGGGCTAAAGCGTG+AGG - chr8_1:80320625-80320644 Msa1217810:intron 55.0%
TTGGCTGGGCTAAAGCGTGA+GGG - chr8_1:80320626-80320645 Msa1217810:intron 55.0%
GTGTGTTAGCGGCCTACACT+CGG - chr8_1:80320650-80320669 Msa1217810:intron 55.0%
TGTGTTAGCGGCCTACACTC+GGG - chr8_1:80320651-80320670 Msa1217810:intron 55.0%
GCAATCCTCACCGTACAAGC+CGG - chr8_1:80320508-80320527 Msa1217810:intron 55.0%
!! CAAAACCGGCTTGTACGGTG+AGG + chr8_1:80320516-80320535 None:intergenic 55.0%
AGCCTATCGGGTCCATCGTT+GGG - chr8_1:80320577-80320596 Msa1217810:intron 55.0%
TGGAGATGCAAGCCCAACGA+TGG + chr8_1:80320592-80320611 None:intergenic 55.0%
CACGCTTTAGCCCAGCCAAA+TGG + chr8_1:80320625-80320644 None:intergenic 55.0%
TTTGGCTGGGCTAAAGCGTG+AGG - chr8_1:80320625-80320644 Msa1217810:intron 55.0%
TTGGCTGGGCTAAAGCGTGA+GGG - chr8_1:80320626-80320645 Msa1217810:intron 55.0%
GTGTGTTAGCGGCCTACACT+CGG - chr8_1:80320650-80320669 Msa1217810:intron 55.0%
TGTGTTAGCGGCCTACACTC+GGG - chr8_1:80320651-80320670 Msa1217810:intron 55.0%
GCAATCCTCACCGTACAAGC+CGG - chr8_1:80320508-80320527 Msa1217810:intron 55.0%
!! CAAAACCGGCTTGTACGGTG+AGG + chr8_1:80320516-80320535 None:intergenic 55.0%
! GAGTTGGTTTCAAGCCCGTG+TGG + chr8_1:80321028-80321047 None:intergenic 55.0%
CAAGAGCCCTTTGGGCTTGT+GGG - chr8_1:80321144-80321163 Msa1217810:CDS 55.0%
TCCCCAATCCGTACAATGCG+AGG + chr8_1:80321449-80321468 None:intergenic 55.0%
! CGGATTGGGGATAATCCGGA+TGG - chr8_1:80321458-80321477 Msa1217810:intron 55.0%
TCCCCAATCCGTACAATGCG+AGG + chr8_1:80321449-80321468 None:intergenic 55.0%
! AAAACATGGGTACCGCCGCA+GGG + chr8_1:80321664-80321683 None:intergenic 55.0%
! TAAAACATGGGTACCGCCGC+AGG + chr8_1:80321665-80321684 None:intergenic 55.0%
AGTGGACGAGTCTGCTGTCA+AGG - chr8_1:80322000-80322019 Msa1217810:intron 55.0%
TCCATGGCGATGTGTGCTCT+TGG - chr8_1:80322038-80322057 Msa1217810:intron 55.0%
! TCCAAGAGCACACATCGCCA+TGG + chr8_1:80322042-80322061 None:intergenic 55.0%
! TCCACAAGGTGGTGGTCAGC+CGG - chr8_1:80314998-80315017 Msa1217810:CDS 60.0%
GGGTATGGGAGGGGAGTTTG+AGG - chr8_1:80315208-80315227 Msa1217810:intron 60.0%
TCTTGACCCGTGCTACCGCA+CGG - chr8_1:80315994-80316013 Msa1217810:intron 60.0%
TGCTAACCGTGCGGTAGCAC+GGG + chr8_1:80316003-80316022 None:intergenic 60.0%
GTGCTAACCGTGCGGTAGCA+CGG + chr8_1:80316004-80316023 None:intergenic 60.0%
GTGCTACCGCACGGTTAGCA+CGG - chr8_1:80316003-80316022 Msa1217810:intron 60.0%
TGCTACCGCACGGTTAGCAC+GGG - chr8_1:80316004-80316023 Msa1217810:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr8_1:80317467-80317486 Msa1217810:intron 60.0%
TTAGCGGCCAACACTCGGGT+GGG - chr8_1:80320431-80320450 Msa1217810:intron 60.0%
GAGCCTATCGGGTCCATCGT+TGG - chr8_1:80320576-80320595 Msa1217810:intron 60.0%
AGCCCAACGATGGACCCGAT+AGG + chr8_1:80320582-80320601 None:intergenic 60.0%
GGCTTGCATCTCCACGCTTC+AGG - chr8_1:80320598-80320617 Msa1217810:intron 60.0%
CTCCACGCTTCAGGCCCATT+TGG - chr8_1:80320607-80320626 Msa1217810:intron 60.0%
AGCCAAATGGGCCTGAAGCG+TGG + chr8_1:80320612-80320631 None:intergenic 60.0%
ACGCTTCAGGCCCATTTGGC+TGG - chr8_1:80320611-80320630 Msa1217810:intron 60.0%
CGCTTCAGGCCCATTTGGCT+GGG - chr8_1:80320612-80320631 Msa1217810:intron 60.0%
TGGCTGGGCTAAAGCGTGAG+GGG - chr8_1:80320627-80320646 Msa1217810:intron 60.0%
! AGCGTGAGGGGGTGTGTTAG+CGG - chr8_1:80320639-80320658 Msa1217810:intron 60.0%
TTAGCGGCCTACACTCGGGT+GGG - chr8_1:80320655-80320674 Msa1217810:intron 60.0%
GAGCCTATCGGGTCCATCGT+TGG - chr8_1:80320576-80320595 Msa1217810:intron 60.0%
AGCCCAACGATGGACCCGAT+AGG + chr8_1:80320582-80320601 None:intergenic 60.0%
GGCTTGCATCTCCACGCTTC+AGG - chr8_1:80320598-80320617 Msa1217810:intron 60.0%
CTCCACGCTTCAGGCCCATT+TGG - chr8_1:80320607-80320626 Msa1217810:intron 60.0%
AGCCAAATGGGCCTGAAGCG+TGG + chr8_1:80320612-80320631 None:intergenic 60.0%
ACGCTTCAGGCCCATTTGGC+TGG - chr8_1:80320611-80320630 Msa1217810:intron 60.0%
CGCTTCAGGCCCATTTGGCT+GGG - chr8_1:80320612-80320631 Msa1217810:intron 60.0%
TGGCTGGGCTAAAGCGTGAG+GGG - chr8_1:80320627-80320646 Msa1217810:intron 60.0%
! AGCGTGAGGGGGTGTGTTAG+CGG - chr8_1:80320639-80320658 Msa1217810:intron 60.0%
TTAGCGGCCTACACTCGGGT+GGG - chr8_1:80320655-80320674 Msa1217810:intron 60.0%
GCAAGAGCCCTTTGGGCTTG+TGG - chr8_1:80321111-80321130 Msa1217810:CDS 60.0%
GATAATCCGGGCTGTCCCTG+CGG - chr8_1:80321646-80321665 Msa1217810:intron 60.0%
AGAAGCGGCGCGACTCTGTG+TGG + chr8_1:80314725-80314744 None:intergenic 65.0%
ACACAGAGTCGCGCCGCTTC+TGG - chr8_1:80314724-80314743 Msa1217810:three_prime_UTR 65.0%
TAGGGCCCGTGCTAACCGTG+CGG + chr8_1:80316012-80316031 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr8_1:80317469-80317488 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr8_1:80317482-80317501 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr8_1:80317483-80317502 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - chr8_1:80317482-80317501 Msa1217810:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr8_1:80317483-80317502 Msa1217810:intron 65.0%
CTGACGCTCCCGCATACGCA+GGG + chr8_1:80317494-80317513 None:intergenic 65.0%
GTTAGCGGCCAACACTCGGG+TGG - chr8_1:80320430-80320449 Msa1217810:intron 65.0%
GGCTGGGCTAAAGCGTGAGG+GGG - chr8_1:80320628-80320647 Msa1217810:intron 65.0%
GTTAGCGGCCTACACTCGGG+TGG - chr8_1:80320654-80320673 Msa1217810:intron 65.0%
GGCTGGGCTAAAGCGTGAGG+GGG - chr8_1:80320628-80320647 Msa1217810:intron 65.0%
GTTAGCGGCCTACACTCGGG+TGG - chr8_1:80320654-80320673 Msa1217810:intron 65.0%
GCCGGCTGACCACCACCTTG+TGG + chr8_1:80315002-80315021 None:intergenic 70.0%
GGTGGTCAGCCGGCAGACAC+TGG - chr8_1:80315008-80315027 Msa1217810:CDS 70.0%
CGCATACGCAGGGTCCGGGA+AGG + chr8_1:80317484-80317503 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG + chr8_1:80317488-80317507 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + chr8_1:80317489-80317508 None:intergenic 70.0%
GCTGACGCTCCCGCATACGC+AGG + chr8_1:80317495-80317514 None:intergenic 70.0%
AATCCGGGCTGTCCCTGCGG+CGG - chr8_1:80321649-80321668 Msa1217810:intron 70.0%
!! TGCGGGAGCGTCAGCGCACC+AGG - chr8_1:80317500-80317519 Msa1217810:intron 75.0%
GTACCGCCGCAGGGACAGCC+CGG + chr8_1:80321655-80321674 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 80314681 80322283 80314681 ID=Msa1217810;Name=Msa1217810
chr8_1 mRNA 80314681 80322283 80314681 ID=Msa1217810-mRNA-1;Parent=Msa1217810;Name=Msa1217810-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.7|0.72|1|0.7|0.81|11|210|274
chr8_1 exon 80314681 80314838 80314681 ID=Msa1217810-mRNA-1:exon:28141;Parent=Msa1217810-mRNA-1
chr8_1 exon 80314916 80315027 80314916 ID=Msa1217810-mRNA-1:exon:28140;Parent=Msa1217810-mRNA-1
chr8_1 exon 80315253 80315348 80315253 ID=Msa1217810-mRNA-1:exon:28139;Parent=Msa1217810-mRNA-1
chr8_1 exon 80316866 80316871 80316866 ID=Msa1217810-mRNA-1:exon:28138;Parent=Msa1217810-mRNA-1
chr8_1 exon 80317697 80317771 80317697 ID=Msa1217810-mRNA-1:exon:28137;Parent=Msa1217810-mRNA-1
chr8_1 exon 80317846 80317948 80317846 ID=Msa1217810-mRNA-1:exon:28136;Parent=Msa1217810-mRNA-1
chr8_1 exon 80321073 80321165 80321073 ID=Msa1217810-mRNA-1:exon:28135;Parent=Msa1217810-mRNA-1
chr8_1 exon 80321667 80321779 80321667 ID=Msa1217810-mRNA-1:exon:28134;Parent=Msa1217810-mRNA-1
chr8_1 exon 80321867 80322013 80321867 ID=Msa1217810-mRNA-1:exon:28133;Parent=Msa1217810-mRNA-1
chr8_1 exon 80322108 80322234 80322108 ID=Msa1217810-mRNA-1:exon:28132;Parent=Msa1217810-mRNA-1
chr8_1 exon 80322279 80322283 80322279 ID=Msa1217810-mRNA-1:exon:28131;Parent=Msa1217810-mRNA-1
chr8_1 CDS 80322279 80322283 80322279 ID=Msa1217810-mRNA-1:cds;Parent=Msa1217810-mRNA-1
chr8_1 CDS 80322108 80322234 80322108 ID=Msa1217810-mRNA-1:cds;Parent=Msa1217810-mRNA-1
chr8_1 CDS 80321867 80322013 80321867 ID=Msa1217810-mRNA-1:cds;Parent=Msa1217810-mRNA-1
chr8_1 CDS 80321667 80321779 80321667 ID=Msa1217810-mRNA-1:cds;Parent=Msa1217810-mRNA-1
chr8_1 CDS 80321073 80321165 80321073 ID=Msa1217810-mRNA-1:cds;Parent=Msa1217810-mRNA-1
chr8_1 CDS 80317846 80317948 80317846 ID=Msa1217810-mRNA-1:cds;Parent=Msa1217810-mRNA-1
chr8_1 CDS 80317697 80317771 80317697 ID=Msa1217810-mRNA-1:cds;Parent=Msa1217810-mRNA-1
chr8_1 CDS 80316866 80316871 80316866 ID=Msa1217810-mRNA-1:cds;Parent=Msa1217810-mRNA-1
chr8_1 CDS 80315253 80315348 80315253 ID=Msa1217810-mRNA-1:cds;Parent=Msa1217810-mRNA-1
chr8_1 CDS 80314968 80315027 80314968 ID=Msa1217810-mRNA-1:cds;Parent=Msa1217810-mRNA-1
chr8_1 three_prime_UTR 80314916 80314967 80314916 ID=Msa1217810-mRNA-1:three_prime_utr;Parent=Msa1217810-mRNA-1
chr8_1 three_prime_UTR 80314681 80314838 80314681 ID=Msa1217810-mRNA-1:three_prime_utr;Parent=Msa1217810-mRNA-1
Gene Sequence

>Msa1217810

ATGATAGTCGCGCCGCTTCTGGAATTGAGTAGTAGGGTGGTGGTGGAGATGGACAAGAGTCCCACAAAGCTGGATTACTATGATGACATGTGGAAGCTTCATTCTACTGCCACACTTGTCTCTCACTTCAAAGGAGTTGATGGGAGGCATGTTTTGATATTGGATCGGACTATTTTCTATCCACAAGGTGGTGGTCAGCCGGCAGACACTGGATTCTTAATCATTCATGATTTGAATATCAAGTTTGTTGTCAATGATGTTCGATCAAAAGATGGAATTGTTTTACACTACGGTGTTTTTGAGGGTATGGGAGGGGAGTTTGAGGGCACACTAGAGAAAGGGAAGGAGGTTTCACTATCTGTTGATGAGAACAGGAGAAAATTAAATTCTAGGTTGCACTCAGCAGGGCATTTGCTAGATATTTGTCTGCCAAAAATTGGATTGGGTCATTTAGAGCCTGGAAAAGCTTACCATTTTTCTGATGGGCCTTGGGTTGAATATAAAGGTGTAATTCCACAAAATGAAATGCAGAATAAGCAAAAGGAGTTGGAGTTAGAGGCTAATGCTTTAATTTCCATGGGAGGAAAAGTTTCTGCTGATATATTACTGTATGATGAAGCTGCTAAGCTTTGCGGTGGTATTCTTCCTGATTATGTTCCTAAGGTAGTGGAAAGCACACCTCGCATTGTACGGATTGGGGATAATCCGGGCTGTCCCTGCGGCGGTACCCATGTTTTAGATGTTTCAGACATCACAAAAATTAAGGTTTCTCAAATTCGGTCAAAGAAGGGAACGACAAAAGTATTTTACAATGTCGAATCTTAG

Protein sequence

>Msa1217810

MIVAPLLELSSRVVVEMDKSPTKLDYYDDMWKLHSTATLVSHFKGVDGRHVLILDRTIFYPQGGGQPADTGFLIIHDLNIKFVVNDVRSKDGIVLHYGVFEGMGGEFEGTLEKGKEVSLSVDENRRKLNSRLHSAGHLLDICLPKIGLGHLEPGKAYHFSDGPWVEYKGVIPQNEMQNKQKELELEANALISMGGKVSADILLYDEAAKLCGGILPDYVPKVVESTPRIVRIGDNPGCPCGGTHVLDVSDITKIKVSQIRSKKGTTKVFYNVES*