Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759380 | sp|O22757|MLO8_ARATH | 53.153 | 555 | 190 | 10 | 21 | 506 | 29 | 582 | 0.0 | 539 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759380 | G7K2K3 | 87.698 | 569 | 12 | 5 | 1 | 513 | 1 | 567 | 0.0 | 992 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021980 | Msa0759380 | 0.823297 | 1.494394e-53 | -8.615850e-47 |
| Msa0035110 | Msa0759380 | 0.809689 | 1.671589e-50 | -8.615850e-47 |
| Msa0036150 | Msa0759380 | 0.826334 | 2.871810e-54 | -8.615850e-47 |
| Msa0053480 | Msa0759380 | 0.815935 | 7.162889e-52 | -8.615850e-47 |
| Msa0641020 | Msa0759380 | 0.834256 | 3.330362e-56 | -8.615850e-47 |
| Msa0641030 | Msa0759380 | 0.831164 | 1.949592e-55 | -8.615850e-47 |
| Msa0648300 | Msa0759380 | 0.801840 | 7.445963e-49 | -8.615850e-47 |
| Msa0657860 | Msa0759380 | 0.827117 | 1.867544e-54 | -8.615850e-47 |
| Msa0679560 | Msa0759380 | 0.811894 | 5.572536e-51 | -8.615850e-47 |
| Msa0744500 | Msa0759380 | 0.804567 | 2.030467e-49 | -8.615850e-47 |
| Msa0759380 | Msa0836510 | 0.801028 | 1.092129e-48 | -8.615850e-47 |
| Msa0759380 | Msa0883350 | 0.816658 | 4.936546e-52 | -8.615850e-47 |
| Msa0759380 | Msa0930090 | 0.818882 | 1.554436e-52 | -8.615850e-47 |
| Msa0759380 | Msa1108780 | 0.823004 | 1.749336e-53 | -8.615850e-47 |
| Msa0759380 | Msa1125450 | 0.809639 | 1.713323e-50 | -8.615850e-47 |
| Msa0759380 | Msa1164570 | 0.801923 | 7.160887e-49 | -8.615850e-47 |
| Msa0759380 | Msa1208710 | 0.801199 | 1.007976e-48 | -8.615850e-47 |
| Msa0759380 | Msa1211280 | 0.804880 | 1.746535e-49 | -8.615850e-47 |
| Msa0759380 | Msa1233740 | 0.831063 | 2.063928e-55 | -8.615850e-47 |
| Msa0759380 | Msa1258950 | 0.805204 | 1.494448e-49 | -8.615850e-47 |
| Msa0759380 | Msa1307770 | 0.806565 | 7.732436e-50 | -8.615850e-47 |
| Msa0759380 | Msa1340620 | 0.817244 | 3.646050e-52 | -8.615850e-47 |
| Msa0759380 | Msa1353760 | 0.830197 | 3.363916e-55 | -8.615850e-47 |
| Msa0759380 | Msa1386250 | 0.801000 | 1.106989e-48 | -8.615850e-47 |
| Msa0759380 | Msa1413880 | 0.803938 | 2.745550e-49 | -8.615850e-47 |
| Msa0759380 | Msa1445250 | 0.844281 | 8.332134e-59 | -8.615850e-47 |
| Msa0759380 | Msa1457070 | 0.818813 | 1.611843e-52 | -8.615850e-47 |
| Msa0759380 | Msa1457180 | 0.836370 | 9.736469e-57 | -8.615850e-47 |
| Msa0175920 | Msa0759380 | 0.814447 | 1.533204e-51 | -8.615850e-47 |
| Msa0365360 | Msa0759380 | 0.852453 | 4.571237e-61 | -8.615850e-47 |
| Msa0389050 | Msa0759380 | 0.803466 | 3.440112e-49 | -8.615850e-47 |
| Msa0416800 | Msa0759380 | 0.820294 | 7.400422e-53 | -8.615850e-47 |
| Msa0457370 | Msa0759380 | 0.814254 | 1.691871e-51 | -8.615850e-47 |
| Msa0463460 | Msa0759380 | 0.803265 | 3.784921e-49 | -8.615850e-47 |
| Msa0304990 | Msa0759380 | 0.807396 | 5.160500e-50 | -8.615850e-47 |
| Msa0343200 | Msa0759380 | 0.805073 | 1.591821e-49 | -8.615850e-47 |
| Msa0509020 | Msa0759380 | 0.809684 | 1.675096e-50 | -8.615850e-47 |
| Msa0535020 | Msa0759380 | 0.811549 | 6.622282e-51 | -8.615850e-47 |
| Msa0535050 | Msa0759380 | 0.813845 | 2.082241e-51 | -8.615850e-47 |
| Msa0544930 | Msa0759380 | 0.847556 | 1.073081e-59 | -8.615850e-47 |
| Msa0575540 | Msa0759380 | 0.837362 | 5.436909e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759380 | MtrunA17_Chr5g0407381 | 87.698 | 569 | 12 | 5 | 1 | 513 | 1 | 567 | 0.0 | 992 |
| Msa0759380 | MtrunA17_Chr8g0370181 | 63.555 | 557 | 130 | 12 | 3 | 492 | 8 | 558 | 0.0 | 650 |
| Msa0759380 | MtrunA17_Chr3g0144201 | 44.365 | 559 | 189 | 13 | 28 | 468 | 9 | 563 | 2.03e-132 | 395 |
| Msa0759380 | MtrunA17_Chr3g0144171 | 40.942 | 552 | 241 | 13 | 30 | 506 | 9 | 550 | 2.24e-130 | 390 |
| Msa0759380 | MtrunA17_Chr6g0462051 | 42.376 | 505 | 219 | 9 | 30 | 465 | 9 | 510 | 1.18e-126 | 381 |
| Msa0759380 | MtrunA17_Chr2g0326301 | 40.079 | 509 | 231 | 8 | 30 | 465 | 8 | 515 | 1.96e-117 | 358 |
| Msa0759380 | MtrunA17_Chr3g0145831 | 38.926 | 447 | 203 | 8 | 30 | 407 | 12 | 457 | 8.71e-97 | 302 |
| Msa0759380 | MtrunA17_Chr8g0337941 | 38.664 | 494 | 223 | 10 | 30 | 445 | 12 | 503 | 2.33e-96 | 301 |
| Msa0759380 | MtrunA17_Chr4g0040611 | 34.141 | 495 | 261 | 8 | 30 | 478 | 7 | 482 | 3.55e-91 | 289 |
| Msa0759380 | MtrunA17_Chr8g0337931 | 37.607 | 468 | 209 | 11 | 48 | 435 | 15 | 479 | 3.83e-86 | 274 |
| Msa0759380 | MtrunA17_Chr2g0317801 | 34.737 | 475 | 240 | 12 | 23 | 433 | 2 | 470 | 6.14e-80 | 259 |
| Msa0759380 | MtrunA17_Chr2g0291441 | 36.152 | 473 | 236 | 10 | 29 | 439 | 7 | 475 | 1.78e-78 | 253 |
| Msa0759380 | MtrunA17_Chr2g0277471 | 31.250 | 512 | 256 | 15 | 30 | 475 | 9 | 490 | 3.22e-68 | 229 |
| Msa0759380 | MtrunA17_Chr5g0405641 | 31.319 | 364 | 188 | 9 | 24 | 330 | 4 | 362 | 4.85e-46 | 165 |
| Msa0759380 | MtrunA17_Chr5g0405651 | 51.852 | 54 | 26 | 0 | 361 | 414 | 9 | 62 | 1.34e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0759380 | AT2G17480.1 | 53.153 | 555 | 190 | 10 | 21 | 506 | 29 | 582 | 0.0 | 539 |
| Msa0759380 | AT2G17430.1 | 52.425 | 536 | 198 | 7 | 3 | 486 | 8 | 538 | 0.0 | 526 |
| Msa0759380 | AT5G65970.1 | 51.366 | 549 | 206 | 11 | 15 | 508 | 21 | 563 | 1.96e-179 | 516 |
| Msa0759380 | AT2G33670.1 | 52.575 | 466 | 166 | 7 | 30 | 442 | 15 | 478 | 2.43e-159 | 462 |
| Msa0759380 | AT1G42560.1 | 51.448 | 449 | 155 | 5 | 30 | 417 | 14 | 460 | 2.76e-145 | 425 |
| Msa0759380 | AT1G61560.1 | 41.697 | 542 | 233 | 11 | 30 | 500 | 8 | 537 | 2.08e-133 | 399 |
| Msa0759380 | AT5G65970.2 | 55.556 | 351 | 119 | 6 | 15 | 331 | 21 | 368 | 5.03e-133 | 394 |
| Msa0759380 | AT1G61560.4 | 40.951 | 547 | 240 | 12 | 30 | 505 | 8 | 542 | 1.87e-129 | 389 |
| Msa0759380 | AT1G11310.1 | 43.791 | 459 | 184 | 5 | 30 | 414 | 8 | 466 | 2.83e-124 | 375 |
| Msa0759380 | AT2G39200.1 | 41.818 | 495 | 219 | 7 | 30 | 456 | 6 | 499 | 1.31e-123 | 374 |
| Msa0759380 | AT1G61560.10 | 45.244 | 431 | 165 | 7 | 30 | 389 | 8 | 438 | 6.31e-118 | 355 |
| Msa0759380 | AT1G61560.2 | 45.098 | 408 | 191 | 7 | 114 | 500 | 80 | 475 | 8.36e-117 | 354 |
| Msa0759380 | AT1G61560.3 | 45.098 | 408 | 191 | 7 | 114 | 500 | 80 | 475 | 8.36e-117 | 354 |
| Msa0759380 | AT1G42560.2 | 50.964 | 363 | 127 | 4 | 30 | 343 | 14 | 374 | 9.72e-114 | 342 |
| Msa0759380 | AT3G45290.1 | 39.866 | 449 | 214 | 7 | 30 | 427 | 17 | 460 | 1.03e-109 | 336 |
| Msa0759380 | AT1G11310.3 | 50.000 | 322 | 140 | 3 | 114 | 414 | 83 | 404 | 6.56e-108 | 331 |
| Msa0759380 | AT1G61560.7 | 44.118 | 408 | 157 | 7 | 30 | 366 | 8 | 415 | 4.15e-106 | 323 |
| Msa0759380 | AT1G61560.9 | 44.118 | 408 | 157 | 7 | 30 | 366 | 8 | 415 | 4.15e-106 | 323 |
| Msa0759380 | AT1G61560.6 | 45.503 | 378 | 147 | 6 | 30 | 348 | 8 | 385 | 5.66e-103 | 315 |
| Msa0759380 | AT1G61560.8 | 45.503 | 378 | 147 | 6 | 30 | 348 | 8 | 385 | 5.66e-103 | 315 |
| Msa0759380 | AT1G61560.5 | 45.503 | 378 | 147 | 6 | 30 | 348 | 8 | 385 | 5.66e-103 | 315 |
| Msa0759380 | AT1G11310.2 | 41.849 | 411 | 165 | 5 | 30 | 366 | 8 | 418 | 4.93e-101 | 310 |
| Msa0759380 | AT2G44110.1 | 37.349 | 498 | 246 | 9 | 31 | 470 | 7 | 496 | 5.35e-100 | 310 |
| Msa0759380 | AT2G44110.2 | 37.200 | 500 | 245 | 11 | 31 | 470 | 7 | 497 | 5.99e-98 | 305 |
| Msa0759380 | AT4G02600.2 | 37.267 | 483 | 224 | 8 | 31 | 441 | 9 | 484 | 1.30e-97 | 305 |
| Msa0759380 | AT4G02600.1 | 37.267 | 483 | 224 | 8 | 31 | 441 | 9 | 484 | 1.30e-97 | 305 |
| Msa0759380 | AT4G24250.1 | 36.478 | 477 | 235 | 10 | 29 | 441 | 6 | 478 | 4.88e-81 | 261 |
| Msa0759380 | AT5G53760.2 | 34.029 | 479 | 246 | 10 | 22 | 433 | 8 | 483 | 1.54e-77 | 254 |
| Msa0759380 | AT5G53760.1 | 34.029 | 479 | 246 | 10 | 22 | 433 | 8 | 483 | 1.54e-77 | 254 |
| Msa0759380 | AT1G26700.1 | 33.888 | 481 | 237 | 10 | 24 | 427 | 4 | 480 | 6.00e-76 | 249 |
| Msa0759380 | AT1G26700.2 | 33.888 | 481 | 237 | 10 | 24 | 427 | 4 | 480 | 6.00e-76 | 249 |
| Msa0759380 | AT1G11000.1 | 30.454 | 463 | 255 | 10 | 30 | 431 | 9 | 465 | 1.23e-67 | 228 |
| Msa0759380 | AT1G11000.3 | 30.454 | 463 | 255 | 10 | 30 | 431 | 9 | 465 | 1.23e-67 | 228 |
| Msa0759380 | AT4G24250.2 | 36.815 | 383 | 188 | 8 | 29 | 360 | 6 | 385 | 8.85e-63 | 211 |
| Msa0759380 | AT1G11000.2 | 30.874 | 366 | 204 | 7 | 30 | 348 | 9 | 372 | 2.90e-54 | 189 |
Find 115 sgRNAs with CRISPR-Local
Find 417 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTATTGTTGTCAGCATTAT+TGG | 0.147783 | 5_2:-14980669 | None:intergenic |
| AACATAATGCTTACAATAAT+TGG | 0.167606 | 5_2:-14985960 | None:intergenic |
| TTTATCTGCCACATCAAAAT+AGG | 0.168493 | 5_2:+14987884 | Msa0759380:three_prime_UTR |
| TAATTTGTTGCAGATAATTT+TGG | 0.171828 | 5_2:+14986031 | Msa0759380:intron |
| TTGAAAGCTTGCAAGAAATT+AGG | 0.197717 | 5_2:+14980869 | Msa0759380:five_prime_UTR |
| GAAAGTGAACTCATCATTAT+TGG | 0.216889 | 5_2:-14987794 | None:intergenic |
| GCCATTATAAAAGTAGCTTT+TGG | 0.241594 | 5_2:+14987077 | Msa0759380:CDS |
| AAGCTTTCAAATTATGTATA+TGG | 0.249655 | 5_2:-14980856 | None:intergenic |
| GAGAAGAGTCTTCACAAATT+AGG | 0.261193 | 5_2:+14981117 | Msa0759380:CDS |
| CAGGATGGCGTACTCCAATA+TGG | 0.262453 | 5_2:+14985925 | Msa0759380:intron |
| ATGAATTGGTCTTTCATAAT+AGG | 0.265631 | 5_2:+14988023 | Msa0759380:three_prime_UTR |
| TCTTGTTTGTGTCTCTTCTA+TGG | 0.266325 | 5_2:+14980973 | Msa0759380:CDS |
| TGGAAATTAAATTTACTTCC+AGG | 0.296007 | 5_2:-14985288 | None:intergenic |
| AGTGCTGTCACAATGCTTCT+TGG | 0.313331 | 5_2:+14984230 | Msa0759380:CDS |
| GTTTCTCACCATGAATGTTT+AGG | 0.319021 | 5_2:-14985502 | None:intergenic |
| TTCTTGCTCCTAAACATTCA+TGG | 0.336700 | 5_2:+14985494 | Msa0759380:CDS |
| CCAATAATGCTGACAACAAT+AGG | 0.349710 | 5_2:+14980669 | Msa0759380:five_prime_UTR |
| ATACCTGAAACAAAGCAAAA+TGG | 0.358535 | 5_2:-14986199 | None:intergenic |
| TACCTTCCTGCTGCATTTGA+AGG | 0.366783 | 5_2:-14983741 | None:intergenic |
| AGCACTTAACAAGTTTCATT+TGG | 0.377483 | 5_2:+14980786 | Msa0759380:five_prime_UTR |
| GCTGGAAAATTGTTTCCGTT+TGG | 0.393446 | 5_2:+14987043 | Msa0759380:CDS |
| AAGGCTCAGATAGATACTTT+TGG | 0.393792 | 5_2:+14986144 | Msa0759380:CDS |
| CATCAAAGGCATTAAAGAAA+TGG | 0.400373 | 5_2:+14987503 | Msa0759380:CDS |
| ATTTACTTCCAGGAGCTAGA+TGG | 0.409021 | 5_2:-14985278 | None:intergenic |
| TTATCTGCCACATCAAAATA+GGG | 0.409688 | 5_2:+14987885 | Msa0759380:three_prime_UTR |
| ATTATCTGATAATGAGTTGA+TGG | 0.411205 | 5_2:+14987699 | Msa0759380:CDS |
| TAAATCCATTGCGCAAAGTC+TGG | 0.417004 | 5_2:-14985088 | None:intergenic |
| ATCATTAGAAGATGACTTCA+AGG | 0.418712 | 5_2:+14985326 | Msa0759380:CDS |
| AAGCTAGGAAAGTCTACTAT+AGG | 0.431641 | 5_2:+14987553 | Msa0759380:CDS |
| TCAAGTGATATTAGCAAGAA+TGG | 0.432108 | 5_2:+14986070 | Msa0759380:CDS |
| ATGAGCAAGAAGCGGAAGAT+AGG | 0.435509 | 5_2:+14987752 | Msa0759380:CDS |
| GCTTACAATAATTGGAATCA+AGG | 0.442500 | 5_2:-14985952 | None:intergenic |
| TGTCAGCATTATTGGAGAAA+AGG | 0.443433 | 5_2:-14980661 | None:intergenic |
| GTGCAGATGCTGCAAAATTC+AGG | 0.444314 | 5_2:+14984545 | Msa0759380:intron |
| GGAATCAAGGATGCCCATAT+TGG | 0.444495 | 5_2:-14985939 | None:intergenic |
| TTTGTCTTAGTTTATTTGTA+GGG | 0.451731 | 5_2:+14987935 | Msa0759380:three_prime_UTR |
| TGATAAGAATCCAACTCAAA+TGG | 0.457901 | 5_2:-14980728 | None:intergenic |
| AAACGGTGAAGTGCTGGTCC+AGG | 0.458690 | 5_2:-14987619 | None:intergenic |
| AGAATATGAGGATGTGTAAC+TGG | 0.460799 | 5_2:-14984181 | None:intergenic |
| CAAGGAATGCCTCTTGTTCA+AGG | 0.463724 | 5_2:+14986125 | Msa0759380:CDS |
| GTTAGGAAATAGAGAAAAGA+AGG | 0.465297 | 5_2:+14983359 | Msa0759380:CDS |
| TCAAGGTAGTCGTGGGAGTA+AGG | 0.468406 | 5_2:+14985343 | Msa0759380:CDS |
| ATGGATGGTAGCACCATTGT+TGG | 0.475444 | 5_2:+14987580 | Msa0759380:CDS |
| GTATAGGTCCATCTAGCTCC+TGG | 0.477053 | 5_2:+14985270 | Msa0759380:intron |
| CAATCATGTAGATGGGTTCA+AGG | 0.477203 | 5_2:+14987452 | Msa0759380:intron |
| CAATAGGAAACCATTTGAGT+TGG | 0.484821 | 5_2:+14980718 | Msa0759380:intron |
| ATAGTAAAGTGGAACAAAGT+AGG | 0.485840 | 5_2:+14983672 | Msa0759380:CDS |
| TGAAGATCGTGTTGAGTGGC+CGG | 0.493387 | 5_2:-14987650 | None:intergenic |
| CTGCAACTGCAAGTGATAGT+AGG | 0.493776 | 5_2:+14981010 | Msa0759380:CDS |
| TGTGTTACAAGAGCATATAA+TGG | 0.494787 | 5_2:-14987246 | None:intergenic |
| CTCCCTCCTTCAAATGCAGC+AGG | 0.503605 | 5_2:+14983735 | Msa0759380:CDS |
| ATCACTTGCAGTTGCAGCCA+TGG | 0.505471 | 5_2:-14981004 | None:intergenic |
| AACAATGGTGCTACCATCCA+TGG | 0.508522 | 5_2:-14987578 | None:intergenic |
| CTATCTGAGCCTTGAACAAG+AGG | 0.511794 | 5_2:-14986134 | None:intergenic |
| AAGACTCTTCTCAAGGGCTA+TGG | 0.514031 | 5_2:-14981106 | None:intergenic |
| TGGCAAGCTTATAGTCCAAA+CGG | 0.516392 | 5_2:-14987058 | None:intergenic |
| ATATTCATCTTGTTCGTCAA+AGG | 0.516799 | 5_2:-14987674 | None:intergenic |
| CTTCTATGGAGGTTTATCCA+TGG | 0.524831 | 5_2:+14980987 | Msa0759380:CDS |
| TTTAAACAGTCCTGTCCTCT+GGG | 0.526222 | 5_2:+14985457 | Msa0759380:intron |
| TATGAAATCAAATAGTAAAG+TGG | 0.527640 | 5_2:+14983661 | Msa0759380:CDS |
| TATTGGAGAAAAGGAGTGAA+AGG | 0.528369 | 5_2:-14980652 | None:intergenic |
| AGGATGGCGTACTCCAATAT+GGG | 0.537615 | 5_2:+14985926 | Msa0759380:intron |
| GGATCAACAATGCAGTCCCC+TGG | 0.538298 | 5_2:+14987601 | Msa0759380:CDS |
| AGATACGTGGATGGAAGGAA+TGG | 0.539200 | 5_2:+14984346 | Msa0759380:intron |
| CACTTGATCAAACACCGACA+TGG | 0.539851 | 5_2:+14981046 | Msa0759380:CDS |
| CTTCACCGTTTCAAAACTAC+CGG | 0.540316 | 5_2:+14987631 | Msa0759380:CDS |
| TCTGCTTGAAGCTCTAGAAA+AGG | 0.545191 | 5_2:+14983383 | Msa0759380:CDS |
| CTTCCTGCTGCATTTGAAGG+AGG | 0.545611 | 5_2:-14983738 | None:intergenic |
| GCATTTGAAGGAGGGAGTAT+CGG | 0.547052 | 5_2:-14983729 | None:intergenic |
| TTCCTGCTGCATTTGAAGGA+GGG | 0.549958 | 5_2:-14983737 | None:intergenic |
| ACAGCTGATGCCCAGAGGAC+AGG | 0.549959 | 5_2:-14985467 | None:intergenic |
| ATTTGTGAAGACTCTTCTCA+AGG | 0.550068 | 5_2:-14981113 | None:intergenic |
| ACTTGATCAAACACCGACAT+GGG | 0.550596 | 5_2:+14981047 | Msa0759380:CDS |
| AGACTGCTAGGAAGAATATG+AGG | 0.552334 | 5_2:-14984193 | None:intergenic |
| TTACAAGAGCATATAATGGA+AGG | 0.555462 | 5_2:-14987242 | None:intergenic |
| GCTCTAGAAAAGGTCAAGGC+TGG | 0.557508 | 5_2:+14983393 | Msa0759380:CDS |
| AGAAAACACCCTCTTGAACA+TGG | 0.560881 | 5_2:-14980953 | None:intergenic |
| AACGGTGAAGTGCTGGTCCA+GGG | 0.561182 | 5_2:-14987618 | None:intergenic |
| TGTTTGTGTCTCTTCTATGG+AGG | 0.561209 | 5_2:+14980976 | Msa0759380:CDS |
| ATTATATGCTCTTGTAACAC+AGG | 0.568116 | 5_2:+14987248 | Msa0759380:CDS |
| GATACGTGGATGGAAGGAAT+GGG | 0.573280 | 5_2:+14984347 | Msa0759380:intron |
| ATAAGATGAAGAACTAATTG+AGG | 0.574661 | 5_2:-14986176 | None:intergenic |
| TCTGCAGATACGTGGATGGA+AGG | 0.581567 | 5_2:+14984341 | Msa0759380:intron |
| AAAACACATGAAAGACTGCT+AGG | 0.587475 | 5_2:-14984205 | None:intergenic |
| CATGGTTATGAGTTCGCCAA+TGG | 0.587616 | 5_2:+14984387 | Msa0759380:CDS |
| AGATGACTTCAAGGTAGTCG+TGG | 0.587794 | 5_2:+14985335 | Msa0759380:CDS |
| ATTTGATGAACAAACATCAA+AGG | 0.587928 | 5_2:+14987489 | Msa0759380:CDS |
| TTTGTGAAGACTCTTCTCAA+GGG | 0.593069 | 5_2:-14981112 | None:intergenic |
| GAAGATAGGCATCACAGTGA+GGG | 0.593750 | 5_2:+14987766 | Msa0759380:CDS |
| AGTCCATTCACAGATAAAAG+TGG | 0.595794 | 5_2:-14984155 | None:intergenic |
| TATCTACCTTCAAAAGACAC+TGG | 0.597529 | 5_2:-14983698 | None:intergenic |
| GATTACCAGACTTTGCGCAA+TGG | 0.602153 | 5_2:+14985083 | Msa0759380:CDS |
| GAAGGGTAATGTAGCTGCAG+AGG | 0.606205 | 5_2:-14987224 | None:intergenic |
| ACGTGGATGGAAGGAATGGG+AGG | 0.615112 | 5_2:+14984350 | Msa0759380:CDS |
| AAAGTCTACTATAGGAACCA+TGG | 0.615638 | 5_2:+14987561 | Msa0759380:CDS |
| AATGCTTCTTGGAAGACTCA+AGG | 0.618511 | 5_2:+14984241 | Msa0759380:CDS |
| TGTTTCTGCAGATACGTGGA+TGG | 0.619092 | 5_2:+14984337 | Msa0759380:intron |
| TGATCATGATGAGCAAGAAG+CGG | 0.620462 | 5_2:+14987744 | Msa0759380:CDS |
| TACAAGAGCATATAATGGAA+GGG | 0.620814 | 5_2:-14987241 | None:intergenic |
| GATGACTTCAAGGTAGTCGT+GGG | 0.621529 | 5_2:+14985336 | Msa0759380:CDS |
| GGAAGATAGGCATCACAGTG+AGG | 0.623584 | 5_2:+14987765 | Msa0759380:CDS |
| GAGGAAGAGACTTTAACTCA+TGG | 0.624104 | 5_2:+14984369 | Msa0759380:CDS |
| CTCCTTCAAATGCAGCAGGA+AGG | 0.624540 | 5_2:+14983739 | Msa0759380:CDS |
| ACGGTGAAGTGCTGGTCCAG+GGG | 0.626903 | 5_2:-14987617 | None:intergenic |
| GAGAGACATATAGTTGTACA+AGG | 0.627620 | 5_2:+14986107 | Msa0759380:CDS |
| TCTACTATAGGAACCATGGA+TGG | 0.633222 | 5_2:+14987565 | Msa0759380:CDS |
| GAGTCTTCACAAATTAGGAA+CGG | 0.644358 | 5_2:+14981122 | Msa0759380:CDS |
| AGGTTGAAGATCGTGTTGAG+TGG | 0.648335 | 5_2:-14987654 | None:intergenic |
| TGAAGCTCTAGAAAAGGTCA+AGG | 0.656136 | 5_2:+14983389 | Msa0759380:CDS |
| CTTGATCAAACACCGACATG+GGG | 0.671274 | 5_2:+14981048 | Msa0759380:CDS |
| CTGCATTGTTGATCCAACAA+TGG | 0.691467 | 5_2:-14987593 | None:intergenic |
| ACAGCGGCAACACCCCATGT+CGG | 0.692061 | 5_2:-14981060 | None:intergenic |
| TCTGCCACATCAAAATAGGG+AGG | 0.708833 | 5_2:+14987888 | Msa0759380:three_prime_UTR |
| GATGAAAACAGTGCAAACAG+CGG | 0.718520 | 5_2:-14981076 | None:intergenic |
| AAACTACAGCTGATGCCCAG+AGG | 0.737888 | 5_2:-14985472 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATTATTATTATTATT+AGG | + | chr5_2:14982677-14982696 | Msa0759380:intron | 0.0% |
| !! | TATTATTATTATTATTATTA+GGG | + | chr5_2:14982678-14982697 | Msa0759380:intron | 0.0% |
| !! | AATAATAATATTAATAATAA+GGG | - | chr5_2:14983249-14983268 | None:intergenic | 0.0% |
| !! | TAATAATAATATTAATAATA+AGG | - | chr5_2:14983250-14983269 | None:intergenic | 0.0% |
| !!! | TAATTTTTTTTTTTTTTAAT+TGG | + | chr5_2:14987968-14987987 | Msa0759380:three_prime_UTR | 0.0% |
| !!! | ATTTTTACTTTTTCATATTT+TGG | + | chr5_2:14981847-14981866 | Msa0759380:intron | 10.0% |
| !!! | TTTCACTTTAAATATATTTT+TGG | - | chr5_2:14982070-14982089 | None:intergenic | 10.0% |
| !!! | TTTAAAGTGAAAAATATTTA+AGG | + | chr5_2:14982078-14982097 | Msa0759380:intron | 10.0% |
| !! | TTAAAGTGAAAAATATTTAA+GGG | + | chr5_2:14982079-14982098 | Msa0759380:intron | 10.0% |
| !!! | TTTTTTTAAACAAACATTAA+GGG | - | chr5_2:14984925-14984944 | None:intergenic | 10.0% |
| !!! | ATTTTTTTAAACAAACATTA+AGG | - | chr5_2:14984926-14984945 | None:intergenic | 10.0% |
| !!! | TATTTTAGTACTAAATTTTT+TGG | + | chr5_2:14985593-14985612 | Msa0759380:intron | 10.0% |
| !! | AAATTATAGAATAGAATTTA+TGG | + | chr5_2:14985797-14985816 | Msa0759380:intron | 10.0% |
| !!! | GAACTATAATTTTTATTATA+TGG | - | chr5_2:14985883-14985902 | None:intergenic | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | + | chr5_2:14986634-14986653 | Msa0759380:intron | 10.0% |
| !!! | TATAAGTAAATTTTTTTTGT+AGG | + | chr5_2:14986694-14986713 | Msa0759380:intron | 10.0% |
| !!! | ATAAGTAAATTTTTTTTGTA+GGG | + | chr5_2:14986695-14986714 | Msa0759380:intron | 10.0% |
| !! | AATAATTTGATTAATTTCAA+TGG | + | chr5_2:14987177-14987196 | Msa0759380:intron | 10.0% |
| !! | ATAATTTGATTAATTTCAAT+GGG | + | chr5_2:14987178-14987197 | Msa0759380:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTAATTGG+TGG | + | chr5_2:14987971-14987990 | Msa0759380:three_prime_UTR | 10.0% |
| !! | ATTTATCAATGTTAAAACTA+TGG | - | chr5_2:14981586-14981605 | None:intergenic | 15.0% |
| !!! | AATTTTTTAGACATCATATT+AGG | - | chr5_2:14982105-14982124 | None:intergenic | 15.0% |
| !! | TAATATGATGTCTAAAAAAT+TGG | + | chr5_2:14982104-14982123 | Msa0759380:intron | 15.0% |
| !! | AAAAAATGTCAAATATGTAT+TGG | - | chr5_2:14982217-14982236 | None:intergenic | 15.0% |
| !!! | AAAAGTCAAGAAATTTTTTA+GGG | - | chr5_2:14982811-14982830 | None:intergenic | 15.0% |
| !!! | TAAAAGTCAAGAAATTTTTT+AGG | - | chr5_2:14982812-14982831 | None:intergenic | 15.0% |
| !!! | TATTTAACTTGAAAACTTTT+GGG | - | chr5_2:14982838-14982857 | None:intergenic | 15.0% |
| !!! | ATATTTAACTTGAAAACTTT+TGG | - | chr5_2:14982839-14982858 | None:intergenic | 15.0% |
| !! | AATTAGCAAAAAATTAAAAG+AGG | - | chr5_2:14984675-14984694 | None:intergenic | 15.0% |
| !!! | TTTAATTTTTTGCTAATTTG+AGG | + | chr5_2:14984677-14984696 | Msa0759380:intron | 15.0% |
| !! | TTTAAAAAAATACAGAAAGA+TGG | + | chr5_2:14984935-14984954 | Msa0759380:intron | 15.0% |
| !!! | TTTTGTTAAACATACTATAT+GGG | - | chr5_2:14985140-14985159 | None:intergenic | 15.0% |
| !!! | TTTTTGTTAAACATACTATA+TGG | - | chr5_2:14985141-14985160 | None:intergenic | 15.0% |
| !! | CTTTATTATTCAAATATAGT+GGG | - | chr5_2:14985415-14985434 | None:intergenic | 15.0% |
| !! | ACTTTATTATTCAAATATAG+TGG | - | chr5_2:14985416-14985435 | None:intergenic | 15.0% |
| !!! | TTTGTATGAAATTTTCATAT+TGG | + | chr5_2:14985984-14986003 | Msa0759380:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr5_2:14986312-14986331 | None:intergenic | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | - | chr5_2:14986384-14986403 | None:intergenic | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | - | chr5_2:14986468-14986487 | None:intergenic | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | - | chr5_2:14986503-14986522 | None:intergenic | 15.0% |
| !! | AAAGCTATTAAAATTAAGTA+AGG | + | chr5_2:14986724-14986743 | Msa0759380:intron | 15.0% |
| !! | TATAACTTAATAAGTTTCAT+AGG | - | chr5_2:14986811-14986830 | None:intergenic | 15.0% |
| !! | TTAAGGTATACTAATAATTA+AGG | - | chr5_2:14986905-14986924 | None:intergenic | 15.0% |
| !!! | TACCTTAATCTTTTTTTTTT+AGG | + | chr5_2:14986917-14986936 | Msa0759380:intron | 15.0% |
| !! | TTCCTAAAAAAAAAAGATTA+AGG | - | chr5_2:14986922-14986941 | None:intergenic | 15.0% |
| !! | TAATTTGATTAATTTCAATG+GGG | + | chr5_2:14987179-14987198 | Msa0759380:intron | 15.0% |
| !! | AAGCTTTCAAATTATGTATA+TGG | - | chr5_2:14980859-14980878 | None:intergenic | 20.0% |
| !! | TTACTAGTAGTAAAACAATA+TGG | - | chr5_2:14981274-14981293 | None:intergenic | 20.0% |
| !!! | TCAATTTGAAATTAAATGCT+AGG | - | chr5_2:14981300-14981319 | None:intergenic | 20.0% |
| !!! | TAATTTTTATGTCTCTTTGT+CGG | - | chr5_2:14981499-14981518 | None:intergenic | 20.0% |
| !!! | TAATTGTGTGATTTTATATG+AGG | + | chr5_2:14981526-14981545 | Msa0759380:intron | 20.0% |
| !!! | AATTTTGCTTTACTATTTCA+AGG | - | chr5_2:14981801-14981820 | None:intergenic | 20.0% |
| !! | ATTTATATGATGTTAAGTGT+TGG | - | chr5_2:14981900-14981919 | None:intergenic | 20.0% |
| !! | TTGAAACAAACCTAAAATAT+GGG | - | chr5_2:14982162-14982181 | None:intergenic | 20.0% |
| !!! | TTTGAAACAAACCTAAAATA+TGG | - | chr5_2:14982163-14982182 | None:intergenic | 20.0% |
| !!! | ACATTTAGATAAGAGTATTT+TGG | + | chr5_2:14982354-14982373 | Msa0759380:intron | 20.0% |
| !! | TATAATACACATCAAATAAG+TGG | + | chr5_2:14982381-14982400 | Msa0759380:intron | 20.0% |
| !! | TACAAAGACAATAATATGTA+GGG | - | chr5_2:14982628-14982647 | None:intergenic | 20.0% |
| !! | TTACAAAGACAATAATATGT+AGG | - | chr5_2:14982629-14982648 | None:intergenic | 20.0% |
| !!! | AAAGTCAAGAAATTTTTTAG+GGG | - | chr5_2:14982810-14982829 | None:intergenic | 20.0% |
| !!! | ATTTAACTTGAAAACTTTTG+GGG | - | chr5_2:14982837-14982856 | None:intergenic | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | + | chr5_2:14983206-14983225 | Msa0759380:intron | 20.0% |
| !!! | ATAAGGGTTAAATATGTTTT+TGG | - | chr5_2:14983233-14983252 | None:intergenic | 20.0% |
| !!! | AAGTTGAATTTTTCTTTTAG+TGG | + | chr5_2:14983337-14983356 | Msa0759380:intron | 20.0% |
| !! | ATTTCACTGTTATTAACTAT+TGG | + | chr5_2:14983554-14983573 | Msa0759380:intron | 20.0% |
| !! | TATGAAATCAAATAGTAAAG+TGG | + | chr5_2:14983661-14983680 | Msa0759380:CDS | 20.0% |
| !!! | TCATTTTTAAATGAAAGAGA+AGG | - | chr5_2:14983784-14983803 | None:intergenic | 20.0% |
| !!! | TTTTGGATTAATCATTAAAG+TGG | + | chr5_2:14983920-14983939 | Msa0759380:intron | 20.0% |
| !!! | TCAATTTGTTAAAATCACAA+TGG | - | chr5_2:14984012-14984031 | None:intergenic | 20.0% |
| !! | AGAAACAAAACTTTCATATA+AGG | - | chr5_2:14984324-14984343 | None:intergenic | 20.0% |
| !! | GAAATTGAAATACAAGAATA+TGG | - | chr5_2:14985019-14985038 | None:intergenic | 20.0% |
| !! | TATTCTTGTATTTCAATTTC+AGG | + | chr5_2:14985019-14985038 | Msa0759380:intron | 20.0% |
| !! | ATTCTTGTATTTCAATTTCA+GGG | + | chr5_2:14985020-14985039 | Msa0759380:intron | 20.0% |
| !! | TTTGTTAAACATACTATATG+GGG | - | chr5_2:14985139-14985158 | None:intergenic | 20.0% |
| !! | ATACATAATTTAAAGAAGGA+AGG | - | chr5_2:14985254-14985273 | None:intergenic | 20.0% |
| !! | TCCTTCTTTAAATTATGTAT+AGG | + | chr5_2:14985254-14985273 | Msa0759380:intron | 20.0% |
| !! | ACCTATACATAATTTAAAGA+AGG | - | chr5_2:14985258-14985277 | None:intergenic | 20.0% |
| !!! | ATGATCTTTTGATATACTTT+TGG | - | chr5_2:14985311-14985330 | None:intergenic | 20.0% |
| !!! | TTTTGTTTAACAAGTCAAAA+TGG | - | chr5_2:14985674-14985693 | None:intergenic | 20.0% |
| !! | TTATAGAATAGAATTTATGG+AGG | + | chr5_2:14985800-14985819 | Msa0759380:intron | 20.0% |
| !! | TATAGAATAGAATTTATGGA+GGG | + | chr5_2:14985801-14985820 | Msa0759380:intron | 20.0% |
| !! | AACATAATGCTTACAATAAT+TGG | - | chr5_2:14985963-14985982 | None:intergenic | 20.0% |
| !!! | TAATTTGTTGCAGATAATTT+TGG | + | chr5_2:14986031-14986050 | Msa0759380:intron | 20.0% |
| !! | AAAACTTGTCTAAAAAATCT+AGG | + | chr5_2:14986237-14986256 | Msa0759380:intron | 20.0% |
| !! | AAACTTGTCTAAAAAATCTA+GGG | + | chr5_2:14986238-14986257 | Msa0759380:intron | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | + | chr5_2:14986414-14986433 | Msa0759380:intron | 20.0% |
| !! | TAAACAAAATTTACTTTAGC+AGG | + | chr5_2:14986662-14986681 | Msa0759380:intron | 20.0% |
| !! | AAACAAAATTTACTTTAGCA+GGG | + | chr5_2:14986663-14986682 | Msa0759380:intron | 20.0% |
| !!! | TTTTGGGTTAAATATGTTTT+TGG | - | chr5_2:14986782-14986801 | None:intergenic | 20.0% |
| !!! | ATTTTTTTGCAGTATTCTTT+TGG | + | chr5_2:14987020-14987039 | Msa0759380:intron | 20.0% |
| !!! | TTTTTTTGCAGTATTCTTTT+GGG | + | chr5_2:14987021-14987040 | Msa0759380:intron | 20.0% |
| !! | TATAGATTAGATATACTAGT+TGG | - | chr5_2:14987129-14987148 | None:intergenic | 20.0% |
| !!! | TTTTGTCTTAGTTTATTTGT+AGG | + | chr5_2:14987934-14987953 | Msa0759380:three_prime_UTR | 20.0% |
| !! | TTTGTCTTAGTTTATTTGTA+GGG | + | chr5_2:14987935-14987954 | Msa0759380:three_prime_UTR | 20.0% |
| !! | CATTTTTCTTTTGTGAGTTT+TGG | + | chr5_2:14980904-14980923 | Msa0759380:five_prime_UTR | 25.0% |
| ! | AGTAGTAAAACAATATGGAA+GGG | - | chr5_2:14981269-14981288 | None:intergenic | 25.0% |
| ! | TAGTAGTAAAACAATATGGA+AGG | - | chr5_2:14981270-14981289 | None:intergenic | 25.0% |
| !!! | TGATTTTATTTGAAGCATGT+AGG | + | chr5_2:14981609-14981628 | Msa0759380:intron | 25.0% |
| ! | AAAAAGTTCATGTACTAATG+AGG | - | chr5_2:14981702-14981721 | None:intergenic | 25.0% |
| ! | TGTTGAAGATTTGATCTTAA+AGG | - | chr5_2:14981973-14981992 | None:intergenic | 25.0% |
| ! | TATGATGTCTAAAAAATTGG+AGG | + | chr5_2:14982107-14982126 | Msa0759380:intron | 25.0% |
| ! | TGAAACAAACCTAAAATATG+GGG | - | chr5_2:14982161-14982180 | None:intergenic | 25.0% |
| !! | TTAGGTTTGTTTCAAAACTT+TGG | + | chr5_2:14982167-14982186 | Msa0759380:intron | 25.0% |
| ! | ATTATTTATGAGAGACTTGT+AGG | + | chr5_2:14982321-14982340 | Msa0759380:intron | 25.0% |
| !!! | TAGTTGAATTTTTTTGACAC+AGG | + | chr5_2:14982460-14982479 | Msa0759380:intron | 25.0% |
| ! | TTCTTCACATTTAAGAATGT+GGG | - | chr5_2:14982577-14982596 | None:intergenic | 25.0% |
| ! | ACAAAGACAATAATATGTAG+GGG | - | chr5_2:14982627-14982646 | None:intergenic | 25.0% |
| ! | TCAAGTTAAATATGATTGTG+TGG | + | chr5_2:14982846-14982865 | Msa0759380:intron | 25.0% |
| !! | CGATTTGAAACTCTTAAAAT+TGG | + | chr5_2:14982924-14982943 | Msa0759380:intron | 25.0% |
| !! | AGAGTTCATATAATTTTGAG+TGG | - | chr5_2:14983038-14983057 | None:intergenic | 25.0% |
| ! | AGGTTGGAAAAAAATTTAGA+GGG | + | chr5_2:14983175-14983194 | Msa0759380:intron | 25.0% |
| !!! | CGAAAAGTTGGTATATTTAT+AGG | + | chr5_2:14983205-14983224 | Msa0759380:intron | 25.0% |
| ! | AAAGAAAAATTCAACTTGTG+AGG | - | chr5_2:14983334-14983353 | None:intergenic | 25.0% |
| !! | GAATTTTTCTTTTAGTGGTT+AGG | + | chr5_2:14983342-14983361 | Msa0759380:intron | 25.0% |
| !! | ACCAAAGGATTTACTATTTT+TGG | + | chr5_2:14983427-14983446 | Msa0759380:intron | 25.0% |
| ! | TCCAAAAATAGTAAATCCTT+TGG | - | chr5_2:14983431-14983450 | None:intergenic | 25.0% |
| !!! | TTTACAGAGTTGATGATTTT+AGG | + | chr5_2:14983527-14983546 | Msa0759380:intron | 25.0% |
| ! | AAATGAAAGAGAAGGAAAAA+AGG | - | chr5_2:14983776-14983795 | None:intergenic | 25.0% |
| ! | ATTTCGGCAAAAACTAAATT+TGG | + | chr5_2:14983966-14983985 | Msa0759380:intron | 25.0% |
| ! | TTTGAACATACACATATTTG+AGG | + | chr5_2:14984039-14984058 | Msa0759380:intron | 25.0% |
| ! | ATAGACATTATAAGCATATG+AGG | - | chr5_2:14984512-14984531 | None:intergenic | 25.0% |
| !! | TTGATTTTATCAAACCATCA+TGG | + | chr5_2:14984707-14984726 | Msa0759380:intron | 25.0% |
| ! | TATATGTAACAAATCCATGA+TGG | - | chr5_2:14984724-14984743 | None:intergenic | 25.0% |
| ! | TATAATGTTTGTTTAAGTCC+TGG | + | chr5_2:14984740-14984759 | Msa0759380:intron | 25.0% |
| ! | TTAAAGAAGGAAGGTAAATA+TGG | - | chr5_2:14985245-14985264 | None:intergenic | 25.0% |
| ! | TGGAAATTAAATTTACTTCC+AGG | - | chr5_2:14985291-14985310 | None:intergenic | 25.0% |
| ! | GATCAACATTGTATATTGTA+TGG | + | chr5_2:14985384-14985403 | Msa0759380:intron | 25.0% |
| !!! | GAATAATAAAGTGCTGAATT+TGG | + | chr5_2:14985424-14985443 | Msa0759380:intron | 25.0% |
| ! | ACATTCTTAGTTGAGTTATA+TGG | + | chr5_2:14985526-14985545 | Msa0759380:intron | 25.0% |
| !!! | GTCCTTATTTTGCTTTAATA+AGG | + | chr5_2:14985716-14985735 | Msa0759380:intron | 25.0% |
| ! | GTCCTTATTAAAGCAAAATA+AGG | - | chr5_2:14985721-14985740 | None:intergenic | 25.0% |
| ! | ATAAGATGAAGAACTAATTG+AGG | - | chr5_2:14986179-14986198 | None:intergenic | 25.0% |
| !!! | TCTAGGGTTAATTATGTTTT+TGG | + | chr5_2:14986254-14986273 | Msa0759380:intron | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | - | chr5_2:14986373-14986392 | None:intergenic | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | + | chr5_2:14986438-14986457 | Msa0759380:intron | 25.0% |
| !! | GTTTCATAGGATAGATTTTT+GGG | - | chr5_2:14986798-14986817 | None:intergenic | 25.0% |
| !! | AGTTTCATAGGATAGATTTT+TGG | - | chr5_2:14986799-14986818 | None:intergenic | 25.0% |
| ! | TCCAAATAACATATATCTTG+TGG | + | chr5_2:14986865-14986884 | Msa0759380:intron | 25.0% |
| ! | TCCACAAGATATATGTTATT+TGG | - | chr5_2:14986869-14986888 | None:intergenic | 25.0% |
| ! | TTAGTCAATGTTCAAGATTA+AGG | - | chr5_2:14986952-14986971 | None:intergenic | 25.0% |
| !! | CCATTATAAAAGTAGCTTTT+GGG | + | chr5_2:14987078-14987097 | Msa0759380:CDS | 25.0% |
| ! | ATTTGATGAACAAACATCAA+AGG | + | chr5_2:14987489-14987508 | Msa0759380:CDS | 25.0% |
| !! | ATTATCTGATAATGAGTTGA+TGG | + | chr5_2:14987699-14987718 | Msa0759380:CDS | 25.0% |
| !! | TGTCTAAAAAGTGTATGAAT+TGG | + | chr5_2:14988009-14988028 | Msa0759380:three_prime_UTR | 25.0% |
| !!! | ATGAATTGGTCTTTCATAAT+AGG | + | chr5_2:14988023-14988042 | Msa0759380:three_prime_UTR | 25.0% |
| TGATAAGAATCCAACTCAAA+TGG | - | chr5_2:14980731-14980750 | None:intergenic | 30.0% | |
| AGCACTTAACAAGTTTCATT+TGG | + | chr5_2:14980786-14980805 | Msa0759380:five_prime_UTR | 30.0% | |
| TTGAAAGCTTGCAAGAAATT+AGG | + | chr5_2:14980869-14980888 | Msa0759380:five_prime_UTR | 30.0% | |
| CTTTAAGCCTACAAATGTAT+TGG | - | chr5_2:14981446-14981465 | None:intergenic | 30.0% | |
| TCAATGTTAAAACTATGGCT+TGG | - | chr5_2:14981581-14981600 | None:intergenic | 30.0% | |
| ATTTCACTACCAATCATGTT+AGG | + | chr5_2:14982017-14982036 | Msa0759380:intron | 30.0% | |
| ! | ATTTTTGTGCCTAACATGAT+TGG | - | chr5_2:14982029-14982048 | None:intergenic | 30.0% |
| GTCACTAAAACAATGACTTT+AGG | - | chr5_2:14982133-14982152 | None:intergenic | 30.0% | |
| GTTTGTTTCAAAACTTTGGA+TGG | + | chr5_2:14982171-14982190 | Msa0759380:intron | 30.0% | |
| TCAAAAAATGTGGTTGCTTA+AGG | - | chr5_2:14982427-14982446 | None:intergenic | 30.0% | |
| !!! | AAGCAACCACATTTTTTGAA+TGG | + | chr5_2:14982428-14982447 | Msa0759380:intron | 30.0% |
| !!! | AACCACATTTTTTGAATGGA+GGG | + | chr5_2:14982432-14982451 | Msa0759380:intron | 30.0% |
| ! | TTGTCAATTAGTTTAGTGCT+TGG | + | chr5_2:14982548-14982567 | Msa0759380:intron | 30.0% |
| CTTCTTCACATTTAAGAATG+TGG | - | chr5_2:14982578-14982597 | None:intergenic | 30.0% | |
| CATTCTTAAATGTGAAGAAG+TGG | + | chr5_2:14982578-14982597 | Msa0759380:intron | 30.0% | |
| TGTCACGATTTATTCAAATC+AGG | - | chr5_2:14982894-14982913 | None:intergenic | 30.0% | |
| AGAAAGAAAATGAGTAGACA+GGG | - | chr5_2:14983000-14983019 | None:intergenic | 30.0% | |
| AAGAAAGAAAATGAGTAGAC+AGG | - | chr5_2:14983001-14983020 | None:intergenic | 30.0% | |
| GAAACAAACACCTAAAATGA+GGG | + | chr5_2:14983117-14983136 | Msa0759380:intron | 30.0% | |
| ! | AAGTGGTGATAGAAATCTTT+TGG | + | chr5_2:14983145-14983164 | Msa0759380:intron | 30.0% |
| ! | AGTGGTGATAGAAATCTTTT+GGG | + | chr5_2:14983146-14983165 | Msa0759380:intron | 30.0% |
| GAGGTTGGAAAAAAATTTAG+AGG | + | chr5_2:14983174-14983193 | Msa0759380:intron | 30.0% | |
| GTTAGGAAATAGAGAAAAGA+AGG | + | chr5_2:14983359-14983378 | Msa0759380:CDS | 30.0% | |
| ! | CTGGTAAGAATTTTTACCAA+AGG | + | chr5_2:14983412-14983431 | Msa0759380:intron | 30.0% |
| TTATCATAGACTTGAAGAGT+TGG | - | chr5_2:14983461-14983480 | None:intergenic | 30.0% | |
| CCTATATATTTATGTGGACA+TGG | - | chr5_2:14983635-14983654 | None:intergenic | 30.0% | |
| CCATGTCCACATAAATATAT+AGG | + | chr5_2:14983632-14983651 | Msa0759380:intron | 30.0% | |
| TGTCCACATAAATATATAGG+TGG | + | chr5_2:14983635-14983654 | Msa0759380:intron | 30.0% | |
| TCACCACCTATATATTTATG+TGG | - | chr5_2:14983641-14983660 | None:intergenic | 30.0% | |
| ATAGTAAAGTGGAACAAAGT+AGG | + | chr5_2:14983672-14983691 | Msa0759380:CDS | 30.0% | |
| ! | CAGCTTTGTGAAACAATTTA+AGG | - | chr5_2:14983832-14983851 | None:intergenic | 30.0% |
| !! | AACTTACTACTAGAAGTACT+TGG | + | chr5_2:14983852-14983871 | Msa0759380:intron | 30.0% |
| TCCAAAATACACTTCTAGTA+GGG | - | chr5_2:14983907-14983926 | None:intergenic | 30.0% | |
| ATCCAAAATACACTTCTAGT+AGG | - | chr5_2:14983908-14983927 | None:intergenic | 30.0% | |
| ACATTGAATCGCTGAAATTT+CGG | + | chr5_2:14983950-14983969 | Msa0759380:intron | 30.0% | |
| AAGAAGCTACTAGAATTGAT+GGG | - | chr5_2:14984105-14984124 | None:intergenic | 30.0% | |
| TAAGAAGCTACTAGAATTGA+TGG | - | chr5_2:14984106-14984125 | None:intergenic | 30.0% | |
| TATCCAAGTTAACTGGTTAT+AGG | + | chr5_2:14984124-14984143 | Msa0759380:intron | 30.0% | |
| ATCCAAGTTAACTGGTTATA+GGG | + | chr5_2:14984125-14984144 | Msa0759380:intron | 30.0% | |
| TTGGAACTCATATATACCAT+TGG | - | chr5_2:14984406-14984425 | None:intergenic | 30.0% | |
| AAATTAAGCACATGCATTGT+TGG | - | chr5_2:14984425-14984444 | None:intergenic | 30.0% | |
| !! | TCATACAAGTTTTTGGACTA+GGG | + | chr5_2:14984597-14984616 | Msa0759380:CDS | 30.0% |
| CATATAATACACCAAATGGT+GGG | + | chr5_2:14984851-14984870 | Msa0759380:intron | 30.0% | |
| ! | ACAAGAATATGGTTAGTCAT+TGG | - | chr5_2:14985008-14985027 | None:intergenic | 30.0% |
| !! | GCTTCTTTAGACAGTTTTAT+AGG | + | chr5_2:14985045-14985064 | Msa0759380:CDS | 30.0% |
| ATCATTAGAAGATGACTTCA+AGG | + | chr5_2:14985326-14985345 | Msa0759380:CDS | 30.0% | |
| AGGACTAAACTTAAAATTCG+TGG | - | chr5_2:14985701-14985720 | None:intergenic | 30.0% | |
| ! | GCTAATCCGATATAATTTTC+AGG | + | chr5_2:14985906-14985925 | Msa0759380:intron | 30.0% |
| !! | ATCCGATATAATTTTCAGGA+TGG | + | chr5_2:14985910-14985929 | Msa0759380:intron | 30.0% |
| GCTTACAATAATTGGAATCA+AGG | - | chr5_2:14985955-14985974 | None:intergenic | 30.0% | |
| TCAAGTGATATTAGCAAGAA+TGG | + | chr5_2:14986070-14986089 | Msa0759380:CDS | 30.0% | |
| !! | TCAGATAGATACTTTTGGTT+AGG | + | chr5_2:14986149-14986168 | Msa0759380:CDS | 30.0% |
| !!! | TATCCATTTTGCTTTGTTTC+AGG | + | chr5_2:14986196-14986215 | Msa0759380:CDS | 30.0% |
| ATACCTGAAACAAAGCAAAA+TGG | - | chr5_2:14986202-14986221 | None:intergenic | 30.0% | |
| ! | TACAAGGTCACAATTTTGTA+GGG | - | chr5_2:14986281-14986300 | None:intergenic | 30.0% |
| ! | TTACAAGGTCACAATTTTGT+AGG | - | chr5_2:14986282-14986301 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | - | chr5_2:14986297-14986316 | None:intergenic | 30.0% | |
| !!! | GAGTGCAGAAATTTTTTGTA+GGG | - | chr5_2:14986341-14986360 | None:intergenic | 30.0% |
| !!! | TGAGTGCAGAAATTTTTTGT+AGG | - | chr5_2:14986342-14986361 | None:intergenic | 30.0% |
| !!! | TTTTGCGATATTTTTTTCGG+AGG | - | chr5_2:14986465-14986484 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTAGA+AGG | + | chr5_2:14986739-14986758 | Msa0759380:intron | 30.0% | |
| ! | TTAGAAGGTCGCAATTTTAT+AGG | + | chr5_2:14986754-14986773 | Msa0759380:intron | 30.0% |
| ! | TAGAAGGTCGCAATTTTATA+GGG | + | chr5_2:14986755-14986774 | Msa0759380:intron | 30.0% |
| TAACATATATCTTGTGGACA+TGG | + | chr5_2:14986871-14986890 | Msa0759380:intron | 30.0% | |
| AACATATATCTTGTGGACAT+GGG | + | chr5_2:14986872-14986891 | Msa0759380:intron | 30.0% | |
| ! | GCCATTATAAAAGTAGCTTT+TGG | + | chr5_2:14987077-14987096 | Msa0759380:CDS | 30.0% |
| !!! | CCCAAAAGCTACTTTTATAA+TGG | - | chr5_2:14987081-14987100 | None:intergenic | 30.0% |
| !!! | TGGATTTTAGTTGTTCTCAT+TGG | - | chr5_2:14987109-14987128 | None:intergenic | 30.0% |
| ! | TACAAGAGCATATAATGGAA+GGG | - | chr5_2:14987244-14987263 | None:intergenic | 30.0% |
| ! | TTACAAGAGCATATAATGGA+AGG | - | chr5_2:14987245-14987264 | None:intergenic | 30.0% |
| ! | TGTGTTACAAGAGCATATAA+TGG | - | chr5_2:14987249-14987268 | None:intergenic | 30.0% |
| ATTATATGCTCTTGTAACAC+AGG | + | chr5_2:14987248-14987267 | Msa0759380:CDS | 30.0% | |
| TGTAATTATATGTGTCGTGT+CGG | + | chr5_2:14987306-14987325 | Msa0759380:intron | 30.0% | |
| AGTAGATATTCTATGAAGCA+CGG | - | chr5_2:14987384-14987403 | None:intergenic | 30.0% | |
| !! | CATCAAAGGCATTAAAGAAA+TGG | + | chr5_2:14987503-14987522 | Msa0759380:CDS | 30.0% |
| ! | AAAAAGAAGCATGTAAAGCT+AGG | + | chr5_2:14987538-14987557 | Msa0759380:CDS | 30.0% |
| ATATTCATCTTGTTCGTCAA+AGG | - | chr5_2:14987677-14987696 | None:intergenic | 30.0% | |
| GAAAGTGAACTCATCATTAT+TGG | - | chr5_2:14987797-14987816 | None:intergenic | 30.0% | |
| TTTATCTGCCACATCAAAAT+AGG | + | chr5_2:14987884-14987903 | Msa0759380:three_prime_UTR | 30.0% | |
| TTATCTGCCACATCAAAATA+GGG | + | chr5_2:14987885-14987904 | Msa0759380:three_prime_UTR | 30.0% | |
| !! | ACACTTTTTAGACAAACTAG+TGG | - | chr5_2:14988003-14988022 | None:intergenic | 30.0% |
| TATTGGAGAAAAGGAGTGAA+AGG | - | chr5_2:14980655-14980674 | None:intergenic | 35.0% | |
| TGTCAGCATTATTGGAGAAA+AGG | - | chr5_2:14980664-14980683 | None:intergenic | 35.0% | |
| CCTATTGTTGTCAGCATTAT+TGG | - | chr5_2:14980672-14980691 | None:intergenic | 35.0% | |
| CCAATAATGCTGACAACAAT+AGG | + | chr5_2:14980669-14980688 | Msa0759380:five_prime_UTR | 35.0% | |
| TTGTCAGCATAATTGGAGAA+TGG | - | chr5_2:14980698-14980717 | None:intergenic | 35.0% | |
| CCTATTGTTGTCAGCATAAT+TGG | - | chr5_2:14980705-14980724 | None:intergenic | 35.0% | |
| CCAATTATGCTGACAACAAT+AGG | + | chr5_2:14980702-14980721 | Msa0759380:intron | 35.0% | |
| CAATAGGAAACCATTTGAGT+TGG | + | chr5_2:14980718-14980737 | Msa0759380:intron | 35.0% | |
| ! | TCTTTTCATCCATGTTCAAG+AGG | + | chr5_2:14980944-14980963 | Msa0759380:exon | 35.0% |
| ! | CTTTTCATCCATGTTCAAGA+GGG | + | chr5_2:14980945-14980964 | Msa0759380:exon | 35.0% |
| ! | TCTTGTTTGTGTCTCTTCTA+TGG | + | chr5_2:14980973-14980992 | Msa0759380:CDS | 35.0% |
| TTTGTGAAGACTCTTCTCAA+GGG | - | chr5_2:14981115-14981134 | None:intergenic | 35.0% | |
| ATTTGTGAAGACTCTTCTCA+AGG | - | chr5_2:14981116-14981135 | None:intergenic | 35.0% | |
| GAGAAGAGTCTTCACAAATT+AGG | + | chr5_2:14981117-14981136 | Msa0759380:CDS | 35.0% | |
| GAGTCTTCACAAATTAGGAA+CGG | + | chr5_2:14981122-14981141 | Msa0759380:CDS | 35.0% | |
| !! | CAAGACAATTTGTTATGCCA+CGG | - | chr5_2:14981335-14981354 | None:intergenic | 35.0% |
| ! | GCTGTTCCACTGAATATTTT+GGG | + | chr5_2:14981411-14981430 | Msa0759380:intron | 35.0% |
| !! | TTCCACTGAATATTTTGGGA+GGG | + | chr5_2:14981415-14981434 | Msa0759380:intron | 35.0% |
| CAACACGCTTAATTTCCAAT+AGG | - | chr5_2:14981649-14981668 | None:intergenic | 35.0% | |
| AACAAACCTAAAATATGGGG+AGG | - | chr5_2:14982158-14982177 | None:intergenic | 35.0% | |
| !!! | CAACCACATTTTTTGAATGG+AGG | + | chr5_2:14982431-14982450 | Msa0759380:intron | 35.0% |
| TTCCCTCCATTCAAAAAATG+TGG | - | chr5_2:14982437-14982456 | None:intergenic | 35.0% | |
| AGACAATAATATGTAGGGGT+CGG | - | chr5_2:14982623-14982642 | None:intergenic | 35.0% | |
| !! | TCACGTTTTGTTGGAAATCA+AGG | - | chr5_2:14983081-14983100 | None:intergenic | 35.0% |
| CGAAACAAACACCTAAAATG+AGG | + | chr5_2:14983116-14983135 | Msa0759380:intron | 35.0% | |
| ! | CACTTTTGATCCCTCATTTT+AGG | - | chr5_2:14983130-14983149 | None:intergenic | 35.0% |
| CTAAAATGAGGGATCAAAAG+TGG | + | chr5_2:14983128-14983147 | Msa0759380:intron | 35.0% | |
| ! | GTGGTGATAGAAATCTTTTG+GGG | + | chr5_2:14983147-14983166 | Msa0759380:intron | 35.0% |
| TATCTACCTTCAAAAGACAC+TGG | - | chr5_2:14983701-14983720 | None:intergenic | 35.0% | |
| GAGAAGGAAAAAAGGAAACA+TGG | - | chr5_2:14983768-14983787 | None:intergenic | 35.0% | |
| AGCTTCTTATCCAAGTTAAC+TGG | + | chr5_2:14984117-14984136 | Msa0759380:intron | 35.0% | |
| !! | GAACCACTTTTATCTGTGAA+TGG | + | chr5_2:14984152-14984171 | Msa0759380:CDS | 35.0% |
| AGTCCATTCACAGATAAAAG+TGG | - | chr5_2:14984158-14984177 | None:intergenic | 35.0% | |
| AGAATATGAGGATGTGTAAC+TGG | - | chr5_2:14984184-14984203 | None:intergenic | 35.0% | |
| AAAACACATGAAAGACTGCT+AGG | - | chr5_2:14984208-14984227 | None:intergenic | 35.0% | |
| ! | TCAGAGCTCATACAAGTTTT+TGG | + | chr5_2:14984590-14984609 | Msa0759380:CDS | 35.0% |
| !! | CTCATACAAGTTTTTGGACT+AGG | + | chr5_2:14984596-14984615 | Msa0759380:CDS | 35.0% |
| GCTGCATATAATACACCAAA+TGG | + | chr5_2:14984847-14984866 | Msa0759380:intron | 35.0% | |
| GCATATAATACACCAAATGG+TGG | + | chr5_2:14984850-14984869 | Msa0759380:intron | 35.0% | |
| TTCTTGCTCCTAAACATTCA+TGG | + | chr5_2:14985494-14985513 | Msa0759380:CDS | 35.0% | |
| GTTTCTCACCATGAATGTTT+AGG | - | chr5_2:14985505-14985524 | None:intergenic | 35.0% | |
| CGCCATCCTGAAAATTATAT+CGG | - | chr5_2:14985915-14985934 | None:intergenic | 35.0% | |
| !!! | TTGCAGATAATTTTGGCTGT+TGG | + | chr5_2:14986038-14986057 | Msa0759380:intron | 35.0% |
| GAGAGACATATAGTTGTACA+AGG | + | chr5_2:14986107-14986126 | Msa0759380:CDS | 35.0% | |
| ! | AAGGCTCAGATAGATACTTT+TGG | + | chr5_2:14986144-14986163 | Msa0759380:CDS | 35.0% |
| ! | CAAGTTTAGAACACTACGAA+AGG | - | chr5_2:14986600-14986619 | None:intergenic | 35.0% |
| TTAATTTCAATGGGGTTTGC+AGG | + | chr5_2:14987187-14987206 | Msa0759380:intron | 35.0% | |
| ATTGACCACAATCATGTAGA+TGG | + | chr5_2:14987444-14987463 | Msa0759380:intron | 35.0% | |
| TTGACCACAATCATGTAGAT+GGG | + | chr5_2:14987445-14987464 | Msa0759380:intron | 35.0% | |
| AAGCTAGGAAAGTCTACTAT+AGG | + | chr5_2:14987553-14987572 | Msa0759380:CDS | 35.0% | |
| AAAGTCTACTATAGGAACCA+TGG | + | chr5_2:14987561-14987580 | Msa0759380:CDS | 35.0% | |
| !!! | AATACCTCCCTATTTTGATG+TGG | - | chr5_2:14987895-14987914 | None:intergenic | 35.0% |
| AGAAAACACCCTCTTGAACA+TGG | - | chr5_2:14980956-14980975 | None:intergenic | 40.0% | |
| TGTTTGTGTCTCTTCTATGG+AGG | + | chr5_2:14980976-14980995 | Msa0759380:CDS | 40.0% | |
| CTTCTATGGAGGTTTATCCA+TGG | + | chr5_2:14980987-14981006 | Msa0759380:CDS | 40.0% | |
| ACTTGATCAAACACCGACAT+GGG | + | chr5_2:14981047-14981066 | Msa0759380:CDS | 40.0% | |
| GATGAAAACAGTGCAAACAG+CGG | - | chr5_2:14981079-14981098 | None:intergenic | 40.0% | |
| ! | ATTGAAGTTTTCTCTTGCCG+TGG | + | chr5_2:14981315-14981334 | Msa0759380:intron | 40.0% |
| ! | GGCTGTTCCACTGAATATTT+TGG | + | chr5_2:14981410-14981429 | Msa0759380:intron | 40.0% |
| !! | GTTCCACTGAATATTTTGGG+AGG | + | chr5_2:14981414-14981433 | Msa0759380:intron | 40.0% |
| AGCCTACAAATGTATTGGAC+CGG | - | chr5_2:14981441-14981460 | None:intergenic | 40.0% | |
| !! | GCATGTAGGACATTGATTTG+TGG | + | chr5_2:14981623-14981642 | Msa0759380:intron | 40.0% |
| !! | GACATTGATTTGTGGCCTAT+TGG | + | chr5_2:14981631-14981650 | Msa0759380:intron | 40.0% |
| GACAATAATATGTAGGGGTC+GGG | - | chr5_2:14982622-14982641 | None:intergenic | 40.0% | |
| TCAGGACACAATTTGAAGAG+CGG | - | chr5_2:14982876-14982895 | None:intergenic | 40.0% | |
| CGTGTTACAATTTCTGTGCA+TGG | - | chr5_2:14982966-14982985 | None:intergenic | 40.0% | |
| TAGGTGTTTGTTTCGATGTG+CGG | - | chr5_2:14983111-14983130 | None:intergenic | 40.0% | |
| !! | AGAAATCTTTTGGGGACTAG+AGG | + | chr5_2:14983155-14983174 | Msa0759380:intron | 40.0% |
| GAGGGACTAAAACGAAAAGT+TGG | + | chr5_2:14983193-14983212 | Msa0759380:intron | 40.0% | |
| !! | TCTGCTTGAAGCTCTAGAAA+AGG | + | chr5_2:14983383-14983402 | Msa0759380:CDS | 40.0% |
| !! | TGAAGCTCTAGAAAAGGTCA+AGG | + | chr5_2:14983389-14983408 | Msa0759380:CDS | 40.0% |
| ! | AGGAAACCAGTGTCTTTTGA+AGG | + | chr5_2:14983692-14983711 | Msa0759380:CDS | 40.0% |
| !! | GCCCTACTAGAAGTGTATTT+TGG | + | chr5_2:14983903-14983922 | Msa0759380:intron | 40.0% |
| ! | TTTGGAGCTTCGCAAAATCA+CGG | + | chr5_2:14983984-14984003 | Msa0759380:intron | 40.0% |
| GTCCCTATAACCAGTTAACT+TGG | - | chr5_2:14984130-14984149 | None:intergenic | 40.0% | |
| AGACTGCTAGGAAGAATATG+AGG | - | chr5_2:14984196-14984215 | None:intergenic | 40.0% | |
| AATGCTTCTTGGAAGACTCA+AGG | + | chr5_2:14984241-14984260 | Msa0759380:CDS | 40.0% | |
| !!! | GTTTTGTTTCTGCAGATACG+TGG | + | chr5_2:14984333-14984352 | Msa0759380:intron | 40.0% |
| GAGGAAGAGACTTTAACTCA+TGG | + | chr5_2:14984369-14984388 | Msa0759380:CDS | 40.0% | |
| GACTGGACGCACAATATAAA+AGG | - | chr5_2:14984632-14984651 | None:intergenic | 40.0% | |
| AGAAACCAGATTAGCAAGAC+TGG | - | chr5_2:14984649-14984668 | None:intergenic | 40.0% | |
| GTCATGTGACTGAAAAGTCA+CGG | + | chr5_2:14984782-14984801 | Msa0759380:intron | 40.0% | |
| TCATGTGACTGAAAAGTCAC+GGG | + | chr5_2:14984783-14984802 | Msa0759380:intron | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | + | chr5_2:14984819-14984838 | Msa0759380:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | + | chr5_2:14984820-14984839 | Msa0759380:intron | 40.0% | |
| ! | CTTACCCTGTTTTACACAAG+AGG | - | chr5_2:14984827-14984846 | None:intergenic | 40.0% |
| CTCTTGTGTAAAACAGGGTA+AGG | + | chr5_2:14984825-14984844 | Msa0759380:intron | 40.0% | |
| AACAAACATTAAGGGCAACC+CGG | - | chr5_2:14984917-14984936 | None:intergenic | 40.0% | |
| ! | GTTTTATAGGTCTGTGCGTA+AGG | + | chr5_2:14985058-14985077 | Msa0759380:CDS | 40.0% |
| TAAATCCATTGCGCAAAGTC+TGG | - | chr5_2:14985091-14985110 | None:intergenic | 40.0% | |
| TTCTGTTACAACAATTGCGC+AGG | - | chr5_2:14985166-14985185 | None:intergenic | 40.0% | |
| ATTTACTTCCAGGAGCTAGA+TGG | - | chr5_2:14985281-14985300 | None:intergenic | 40.0% | |
| ! | TTTTAAACAGTCCTGTCCTC+TGG | + | chr5_2:14985456-14985475 | Msa0759380:intron | 40.0% |
| TTTAAACAGTCCTGTCCTCT+GGG | + | chr5_2:14985457-14985476 | Msa0759380:intron | 40.0% | |
| ATAGAATTTATGGAGGGACG+AGG | + | chr5_2:14985807-14985826 | Msa0759380:intron | 40.0% | |
| ! | ATCTAGGAGGCGCAAATTTA+TGG | + | chr5_2:14985838-14985857 | Msa0759380:intron | 40.0% |
| ! | TCTAGGAGGCGCAAATTTAT+GGG | + | chr5_2:14985839-14985858 | Msa0759380:intron | 40.0% |
| ! | TTTGCAGTATTCTTTTGGGC+TGG | + | chr5_2:14987025-14987044 | Msa0759380:intron | 40.0% |
| GCTGGAAAATTGTTTCCGTT+TGG | + | chr5_2:14987043-14987062 | Msa0759380:CDS | 40.0% | |
| TGGCAAGCTTATAGTCCAAA+CGG | - | chr5_2:14987061-14987080 | None:intergenic | 40.0% | |
| TATGAAGCACGGACAATCTT+CGG | - | chr5_2:14987373-14987392 | None:intergenic | 40.0% | |
| TGAACCCATCTACATGATTG+TGG | - | chr5_2:14987452-14987471 | None:intergenic | 40.0% | |
| ! | CAATCATGTAGATGGGTTCA+AGG | + | chr5_2:14987452-14987471 | Msa0759380:intron | 40.0% |
| TCTACTATAGGAACCATGGA+TGG | + | chr5_2:14987565-14987584 | Msa0759380:CDS | 40.0% | |
| CTGCATTGTTGATCCAACAA+TGG | - | chr5_2:14987596-14987615 | None:intergenic | 40.0% | |
| CTTCACCGTTTCAAAACTAC+CGG | + | chr5_2:14987631-14987650 | Msa0759380:CDS | 40.0% | |
| TGATCATGATGAGCAAGAAG+CGG | + | chr5_2:14987744-14987763 | Msa0759380:CDS | 40.0% | |
| CTGCAACTGCAAGTGATAGT+AGG | + | chr5_2:14981010-14981029 | Msa0759380:CDS | 45.0% | |
| CACTTGATCAAACACCGACA+TGG | + | chr5_2:14981046-14981065 | Msa0759380:CDS | 45.0% | |
| CTTGATCAAACACCGACATG+GGG | + | chr5_2:14981048-14981067 | Msa0759380:CDS | 45.0% | |
| AAGACTCTTCTCAAGGGCTA+TGG | - | chr5_2:14981109-14981128 | None:intergenic | 45.0% | |
| !! | ACTGAATATTTTGGGAGGGC+CGG | + | chr5_2:14981419-14981438 | Msa0759380:intron | 45.0% |
| ! | TGACAGCCTCCCCATATTTT+AGG | + | chr5_2:14982149-14982168 | Msa0759380:intron | 45.0% |
| AATATGTAGGGGTCGGGTTT+CGG | - | chr5_2:14982616-14982635 | None:intergenic | 45.0% | |
| !! | ATCTTTTGGGGACTAGAGGT+TGG | + | chr5_2:14983159-14983178 | Msa0759380:intron | 45.0% |
| ! | GCATTTGAAGGAGGGAGTAT+CGG | - | chr5_2:14983732-14983751 | None:intergenic | 45.0% |
| TTCCTGCTGCATTTGAAGGA+GGG | - | chr5_2:14983740-14983759 | None:intergenic | 45.0% | |
| TACCTTCCTGCTGCATTTGA+AGG | - | chr5_2:14983744-14983763 | None:intergenic | 45.0% | |
| AGTGCTGTCACAATGCTTCT+TGG | + | chr5_2:14984230-14984249 | Msa0759380:CDS | 45.0% | |
| ! | TGTTTCTGCAGATACGTGGA+TGG | + | chr5_2:14984337-14984356 | Msa0759380:intron | 45.0% |
| AGATACGTGGATGGAAGGAA+TGG | + | chr5_2:14984346-14984365 | Msa0759380:intron | 45.0% | |
| GATACGTGGATGGAAGGAAT+GGG | + | chr5_2:14984347-14984366 | Msa0759380:intron | 45.0% | |
| CATGGTTATGAGTTCGCCAA+TGG | + | chr5_2:14984387-14984406 | Msa0759380:CDS | 45.0% | |
| GTGCAGATGCTGCAAAATTC+AGG | + | chr5_2:14984545-14984564 | Msa0759380:intron | 45.0% | |
| AAAGTCACGGGTTCAAGTCA+TGG | + | chr5_2:14984795-14984814 | Msa0759380:intron | 45.0% | |
| ! | TGGTGCACGACATTTTTACG+AGG | - | chr5_2:14984988-14985007 | None:intergenic | 45.0% |
| GATTACCAGACTTTGCGCAA+TGG | + | chr5_2:14985083-14985102 | Msa0759380:CDS | 45.0% | |
| AGATGACTTCAAGGTAGTCG+TGG | + | chr5_2:14985335-14985354 | Msa0759380:CDS | 45.0% | |
| GATGACTTCAAGGTAGTCGT+GGG | + | chr5_2:14985336-14985355 | Msa0759380:CDS | 45.0% | |
| !! | TAGCACAAGGAGTGCTAGAA+CGG | - | chr5_2:14985623-14985642 | None:intergenic | 45.0% |
| GGACGAGGAGAACTAAATCT+AGG | + | chr5_2:14985822-14985841 | Msa0759380:intron | 45.0% | |
| CGAGGAGAACTAAATCTAGG+AGG | + | chr5_2:14985825-14985844 | Msa0759380:intron | 45.0% | |
| AGGATGGCGTACTCCAATAT+GGG | + | chr5_2:14985926-14985945 | Msa0759380:intron | 45.0% | |
| GGAATCAAGGATGCCCATAT+TGG | - | chr5_2:14985942-14985961 | None:intergenic | 45.0% | |
| CAAGGAATGCCTCTTGTTCA+AGG | + | chr5_2:14986125-14986144 | Msa0759380:CDS | 45.0% | |
| CTATCTGAGCCTTGAACAAG+AGG | - | chr5_2:14986137-14986156 | None:intergenic | 45.0% | |
| ! | TATATGTGTCGTGTCGGTGT+CGG | + | chr5_2:14987312-14987331 | Msa0759380:intron | 45.0% |
| !! | AACAATGGTGCTACCATCCA+TGG | - | chr5_2:14987581-14987600 | None:intergenic | 45.0% |
| ATGGATGGTAGCACCATTGT+TGG | + | chr5_2:14987580-14987599 | Msa0759380:CDS | 45.0% | |
| !!! | GTTTTGAAACGGTGAAGTGC+TGG | - | chr5_2:14987628-14987647 | None:intergenic | 45.0% |
| !!! | AGTGGCCGGTAGTTTTGAAA+CGG | - | chr5_2:14987639-14987658 | None:intergenic | 45.0% |
| AGGTTGAAGATCGTGTTGAG+TGG | - | chr5_2:14987657-14987676 | None:intergenic | 45.0% | |
| ATGAGCAAGAAGCGGAAGAT+AGG | + | chr5_2:14987752-14987771 | Msa0759380:CDS | 45.0% | |
| GAAGATAGGCATCACAGTGA+GGG | + | chr5_2:14987766-14987785 | Msa0759380:CDS | 45.0% | |
| TCTGCCACATCAAAATAGGG+AGG | + | chr5_2:14987888-14987907 | Msa0759380:three_prime_UTR | 45.0% | |
| !! | AATTATTATTATGAAATAAA+GGG | - | chr5_2:14981388-14981407 | None:intergenic | 5.0% |
| !! | TAATTATTATTATGAAATAA+AGG | - | chr5_2:14981389-14981408 | None:intergenic | 5.0% |
| !! | TTATTTCATAATAATAATTA+TGG | + | chr5_2:14981389-14981408 | Msa0759380:intron | 5.0% |
| ATCACTTGCAGTTGCAGCCA+TGG | - | chr5_2:14981007-14981026 | None:intergenic | 50.0% | |
| GGCCCTCCCAAAATATTCAG+TGG | - | chr5_2:14981420-14981439 | None:intergenic | 50.0% | |
| GGCCGGTCCAATACATTTGT+AGG | + | chr5_2:14981436-14981455 | Msa0759380:intron | 50.0% | |
| ! | GGCTGCAACTCACGTTTTGT+TGG | - | chr5_2:14983090-14983109 | None:intergenic | 50.0% |
| !! | GCTCTAGAAAAGGTCAAGGC+TGG | + | chr5_2:14983393-14983412 | Msa0759380:CDS | 50.0% |
| CTTCCTGCTGCATTTGAAGG+AGG | - | chr5_2:14983741-14983760 | None:intergenic | 50.0% | |
| CTCCTTCAAATGCAGCAGGA+AGG | + | chr5_2:14983739-14983758 | Msa0759380:CDS | 50.0% | |
| TCTGCAGATACGTGGATGGA+AGG | + | chr5_2:14984341-14984360 | Msa0759380:intron | 50.0% | |
| TGCGTCCAGTCTTGCTAATC+TGG | + | chr5_2:14984641-14984660 | Msa0759380:intron | 50.0% | |
| TGTTTAAGTCCTGGCGCAAC+TGG | + | chr5_2:14984749-14984768 | Msa0759380:intron | 50.0% | |
| ACAACTTTACCAGTTGCGCC+AGG | - | chr5_2:14984761-14984780 | None:intergenic | 50.0% | |
| ! | CTTTTACGCTGACACAGCTG+CGG | + | chr5_2:14985196-14985215 | Msa0759380:intron | 50.0% |
| ! | GTATAGGTCCATCTAGCTCC+TGG | + | chr5_2:14985270-14985289 | Msa0759380:intron | 50.0% |
| TCAAGGTAGTCGTGGGAGTA+AGG | + | chr5_2:14985343-14985362 | Msa0759380:CDS | 50.0% | |
| AAACTACAGCTGATGCCCAG+AGG | - | chr5_2:14985475-14985494 | None:intergenic | 50.0% | |
| CAGGATGGCGTACTCCAATA+TGG | + | chr5_2:14985925-14985944 | Msa0759380:intron | 50.0% | |
| GAAGGGTAATGTAGCTGCAG+AGG | - | chr5_2:14987227-14987246 | None:intergenic | 50.0% | |
| TGAAGATCGTGTTGAGTGGC+CGG | - | chr5_2:14987653-14987672 | None:intergenic | 50.0% | |
| GGAAGATAGGCATCACAGTG+AGG | + | chr5_2:14987765-14987784 | Msa0759380:CDS | 50.0% | |
| CTCCCTCCTTCAAATGCAGC+AGG | + | chr5_2:14983735-14983754 | Msa0759380:CDS | 55.0% | |
| ACGTGGATGGAAGGAATGGG+AGG | + | chr5_2:14984350-14984369 | Msa0759380:CDS | 55.0% | |
| ! | CAAATGGTGGGACTCCTTCC+CGG | + | chr5_2:14984863-14984882 | Msa0759380:intron | 55.0% |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr5_2:14984890-14984909 | None:intergenic | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr5_2:14984891-14984910 | None:intergenic | 55.0% | |
| ACACGACATGTGTCCGACAC+TGG | + | chr5_2:14987335-14987354 | Msa0759380:intron | 55.0% | |
| CACGACATGTGTCCGACACT+GGG | + | chr5_2:14987336-14987355 | Msa0759380:intron | 55.0% | |
| ATGTGTCCGACACTGGGACA+CGG | + | chr5_2:14987342-14987361 | Msa0759380:intron | 55.0% | |
| ! | GATTAGCCGTGTCCCAGTGT+CGG | - | chr5_2:14987351-14987370 | None:intergenic | 55.0% |
| GGATCAACAATGCAGTCCCC+TGG | + | chr5_2:14987601-14987620 | Msa0759380:CDS | 55.0% | |
| !! | AACGGTGAAGTGCTGGTCCA+GGG | - | chr5_2:14987621-14987640 | None:intergenic | 55.0% |
| !! | AAACGGTGAAGTGCTGGTCC+AGG | - | chr5_2:14987622-14987641 | None:intergenic | 55.0% |
| ACAGCGGCAACACCCCATGT+CGG | - | chr5_2:14981063-14981082 | None:intergenic | 60.0% | |
| CGGGAAGGAGTCCCACCATT+TGG | - | chr5_2:14984865-14984884 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr5_2:14984878-14984897 | Msa0759380:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr5_2:14984879-14984898 | Msa0759380:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr5_2:14984895-14984914 | Msa0759380:intron | 60.0% |
| ACAGCTGATGCCCAGAGGAC+AGG | - | chr5_2:14985470-14985489 | None:intergenic | 60.0% | |
| !! | ACGGTGAAGTGCTGGTCCAG+GGG | - | chr5_2:14987620-14987639 | None:intergenic | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr5_2:14984880-14984899 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr5_2:14984884-14984903 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr5_2:14984885-14984904 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr5_2:14984896-14984915 | Msa0759380:intron | 65.0% |
| CGCTGACACAGCTGCGGTTG+TGG | + | chr5_2:14985202-14985221 | Msa0759380:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 14980643 | 14988061 | 14980643 | ID=Msa0759380;Name=Msa0759380 |
| chr5_2 | mRNA | 14980643 | 14988061 | 14980643 | ID=Msa0759380-mRNA-1;Parent=Msa0759380;Name=Msa0759380-mRNA-1;_AED=0.18;_eAED=0.18;_QI=279|0.78|0.86|1|0.92|0.86|15|215|513 |
| chr5_2 | exon | 14980643 | 14980690 | 14980643 | ID=Msa0759380-mRNA-1:exon:6764;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14980724 | 14981143 | 14980724 | ID=Msa0759380-mRNA-1:exon:6765;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14983357 | 14983414 | 14983357 | ID=Msa0759380-mRNA-1:exon:6766;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14983654 | 14983760 | 14983654 | ID=Msa0759380-mRNA-1:exon:6767;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14984146 | 14984262 | 14984146 | ID=Msa0759380-mRNA-1:exon:6768;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14984348 | 14984408 | 14984348 | ID=Msa0759380-mRNA-1:exon:6769;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14984551 | 14984618 | 14984551 | ID=Msa0759380-mRNA-1:exon:6770;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14985041 | 14985115 | 14985041 | ID=Msa0759380-mRNA-1:exon:6771;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14985276 | 14985364 | 14985276 | ID=Msa0759380-mRNA-1:exon:6772;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14985466 | 14985515 | 14985466 | ID=Msa0759380-mRNA-1:exon:6773;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14985928 | 14985968 | 14985928 | ID=Msa0759380-mRNA-1:exon:6774;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14986044 | 14986217 | 14986044 | ID=Msa0759380-mRNA-1:exon:6775;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14987032 | 14987099 | 14987032 | ID=Msa0759380-mRNA-1:exon:6776;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14987209 | 14987269 | 14987209 | ID=Msa0759380-mRNA-1:exon:6777;Parent=Msa0759380-mRNA-1 |
| chr5_2 | exon | 14987463 | 14988061 | 14987463 | ID=Msa0759380-mRNA-1:exon:6778;Parent=Msa0759380-mRNA-1 |
| chr5_2 | five_prime_UTR | 14980643 | 14980690 | 14980643 | ID=Msa0759380-mRNA-1:five_prime_utr;Parent=Msa0759380-mRNA-1 |
| chr5_2 | five_prime_UTR | 14980724 | 14980954 | 14980724 | ID=Msa0759380-mRNA-1:five_prime_utr;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14980955 | 14981143 | 14980955 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14983357 | 14983414 | 14983357 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14983654 | 14983760 | 14983654 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14984146 | 14984262 | 14984146 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14984348 | 14984408 | 14984348 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14984551 | 14984618 | 14984551 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14985041 | 14985115 | 14985041 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14985276 | 14985364 | 14985276 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14985466 | 14985515 | 14985466 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14985928 | 14985968 | 14985928 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14986044 | 14986217 | 14986044 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14987032 | 14987099 | 14987032 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14987209 | 14987269 | 14987209 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | CDS | 14987463 | 14987846 | 14987463 | ID=Msa0759380-mRNA-1:cds;Parent=Msa0759380-mRNA-1 |
| chr5_2 | three_prime_UTR | 14987847 | 14988061 | 14987847 | ID=Msa0759380-mRNA-1:three_prime_utr;Parent=Msa0759380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
