Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1457180 | XP_003589183.2 | 96.266 | 482 | 18 | 0 | 1 | 482 | 1 | 482 | 0.0 | 964 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1457180 | sp|A9QNE7|ABAH1_SOLLC | 68.870 | 469 | 138 | 5 | 9 | 472 | 11 | 476 | 0.0 | 655 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1457180 | G7I3J9 | 96.266 | 482 | 18 | 0 | 1 | 482 | 1 | 482 | 0.0 | 964 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0015100 | Msa1457180 | 0.802369 | 5.795938e-49 | -8.615850e-47 |
Msa0021980 | Msa1457180 | 0.826789 | 2.237591e-54 | -8.615850e-47 |
Msa0026670 | Msa1457180 | 0.960334 | 1.932975e-118 | -8.615850e-47 |
Msa0036150 | Msa1457180 | 0.817644 | 2.962723e-52 | -8.615850e-47 |
Msa0053480 | Msa1457180 | 0.827737 | 1.325971e-54 | -8.615850e-47 |
Msa0053960 | Msa1457180 | 0.804731 | 1.876317e-49 | -8.615850e-47 |
Msa0070090 | Msa1457180 | 0.807472 | 4.970703e-50 | -8.615850e-47 |
Msa1353760 | Msa1457180 | 0.979166 | 2.248712e-147 | -8.615850e-47 |
Msa1373950 | Msa1457180 | 0.814632 | 1.395347e-51 | -8.615850e-47 |
Msa1397540 | Msa1457180 | 0.808536 | 2.951311e-50 | -8.615850e-47 |
Msa1413880 | Msa1457180 | 0.800891 | 1.164992e-48 | -8.615850e-47 |
Msa1445250 | Msa1457180 | 0.830010 | 3.735290e-55 | -8.615850e-47 |
Msa1457070 | Msa1457180 | 0.809929 | 1.483879e-50 | -8.615850e-47 |
Msa1457180 | Msa1460310 | -0.811992 | 5.303452e-51 | -8.615850e-47 |
Msa0626230 | Msa1457180 | 0.815306 | 9.889240e-52 | -8.615850e-47 |
Msa0640380 | Msa1457180 | 0.845838 | 3.163040e-59 | -8.615850e-47 |
Msa0641020 | Msa1457180 | 0.826636 | 2.433165e-54 | -8.615850e-47 |
Msa0641030 | Msa1457180 | 0.808948 | 2.409576e-50 | -8.615850e-47 |
Msa0657860 | Msa1457180 | 0.858059 | 1.068109e-62 | -8.615850e-47 |
Msa0664020 | Msa1457180 | 0.814848 | 1.249999e-51 | -8.615850e-47 |
Msa0664130 | Msa1457180 | 0.813170 | 2.930650e-51 | -8.615850e-47 |
Msa0678820 | Msa1457180 | 0.816369 | 5.728809e-52 | -8.615850e-47 |
Msa0679560 | Msa1457180 | 0.811847 | 5.704813e-51 | -8.615850e-47 |
Msa0699520 | Msa1457180 | 0.806389 | 8.423056e-50 | -8.615850e-47 |
Msa0702200 | Msa1457180 | 0.811098 | 8.297319e-51 | -8.615850e-47 |
Msa0722930 | Msa1457180 | 0.818669 | 1.737532e-52 | -8.615850e-47 |
Msa0723140 | Msa1457180 | 0.826652 | 2.412234e-54 | -8.615850e-47 |
Msa0744500 | Msa1457180 | 0.802038 | 6.780696e-49 | -8.615850e-47 |
Msa0748980 | Msa1457180 | 0.803778 | 2.964072e-49 | -8.615850e-47 |
Msa0755740 | Msa1457180 | 0.844227 | 8.613129e-59 | -8.615850e-47 |
Msa0756940 | Msa1457180 | 0.829955 | 3.853014e-55 | -8.615850e-47 |
Msa0759380 | Msa1457180 | 0.836370 | 9.736469e-57 | -8.615850e-47 |
Msa0792510 | Msa1457180 | 0.816956 | 4.231966e-52 | -8.615850e-47 |
Msa0826650 | Msa1457180 | 0.804322 | 2.283714e-49 | -8.615850e-47 |
Msa0828570 | Msa1457180 | 0.809485 | 1.849058e-50 | -8.615850e-47 |
Msa0835550 | Msa1457180 | 0.800960 | 1.127843e-48 | -8.615850e-47 |
Msa0836510 | Msa1457180 | 0.825176 | 5.407354e-54 | -8.615850e-47 |
Msa0130100 | Msa1457180 | 0.800923 | 1.147581e-48 | -8.615850e-47 |
Msa0145180 | Msa1457180 | 0.956193 | 5.243216e-114 | -8.615850e-47 |
Msa0181410 | Msa1457180 | 0.820765 | 5.769075e-53 | -8.615850e-47 |
Msa0198440 | Msa1457180 | 0.818697 | 1.711984e-52 | -8.615850e-47 |
Msa0213090 | Msa1457180 | 0.803229 | 3.852150e-49 | -8.615850e-47 |
Msa1237260 | Msa1457180 | 0.806607 | 7.577012e-50 | -8.615850e-47 |
Msa1244300 | Msa1457180 | 0.822673 | 2.088892e-53 | -8.615850e-47 |
Msa1255520 | Msa1457180 | 0.809495 | 1.839868e-50 | -8.615850e-47 |
Msa1258950 | Msa1457180 | 0.842356 | 2.718922e-58 | -8.615850e-47 |
Msa1264140 | Msa1457180 | 0.825713 | 4.035111e-54 | -8.615850e-47 |
Msa1340620 | Msa1457180 | 0.832932 | 7.128783e-56 | -8.615850e-47 |
Msa0365360 | Msa1457180 | 0.860928 | 1.466476e-63 | -8.615850e-47 |
Msa0375050 | Msa1457180 | 0.808667 | 2.767326e-50 | -8.615850e-47 |
Msa0404690 | Msa1457180 | 0.812401 | 4.320180e-51 | -8.615850e-47 |
Msa0411000 | Msa1457180 | 0.808621 | 2.830107e-50 | -8.615850e-47 |
Msa0416800 | Msa1457180 | 0.830624 | 2.643841e-55 | -8.615850e-47 |
Msa0428850 | Msa1457180 | -0.800374 | 1.485061e-48 | -8.615850e-47 |
Msa0441780 | Msa1457180 | -0.800380 | 1.480681e-48 | -8.615850e-47 |
Msa0455230 | Msa1457180 | 0.815185 | 1.052042e-51 | -8.615850e-47 |
Msa0457370 | Msa1457180 | 0.813347 | 2.680164e-51 | -8.615850e-47 |
Msa0463460 | Msa1457180 | 0.821955 | 3.065692e-53 | -8.615850e-47 |
Msa0995670 | Msa1457180 | 0.807001 | 6.255669e-50 | -8.615850e-47 |
Msa1036390 | Msa1457180 | 0.805422 | 1.345294e-49 | -8.615850e-47 |
Msa1044450 | Msa1457180 | 0.810154 | 1.327125e-50 | -8.615850e-47 |
Msa1076680 | Msa1457180 | 0.803189 | 3.926390e-49 | -8.615850e-47 |
Msa0253370 | Msa1457180 | 0.804844 | 1.777409e-49 | -8.615850e-47 |
Msa0264940 | Msa1457180 | -0.806862 | 6.694752e-50 | -8.615850e-47 |
Msa0278670 | Msa1457180 | 0.818644 | 1.759978e-52 | -8.615850e-47 |
Msa0302990 | Msa1457180 | -0.812351 | 4.428260e-51 | -8.615850e-47 |
Msa0318070 | Msa1457180 | 0.803960 | 2.716862e-49 | -8.615850e-47 |
Msa0330400 | Msa1457180 | 0.807743 | 4.353868e-50 | -8.615850e-47 |
Msa0343200 | Msa1457180 | 0.826850 | 2.163629e-54 | -8.615850e-47 |
Msa0363460 | Msa1457180 | 0.813111 | 3.019593e-51 | -8.615850e-47 |
Msa1108780 | Msa1457180 | 0.847385 | 1.195566e-59 | -8.615850e-47 |
Msa1182830 | Msa1457180 | 0.800425 | 1.450089e-48 | -8.615850e-47 |
Msa1208710 | Msa1457180 | 0.839503 | 1.523656e-57 | -8.615850e-47 |
Msa1211280 | Msa1457180 | 0.800433 | 1.444418e-48 | -8.615850e-47 |
Msa1211370 | Msa1457180 | 0.806190 | 9.279662e-50 | -8.615850e-47 |
Msa1221200 | Msa1457180 | -0.808501 | 3.002191e-50 | -8.615850e-47 |
Msa0504630 | Msa1457180 | 0.808265 | 3.372477e-50 | -8.615850e-47 |
Msa0509020 | Msa1457180 | 0.814094 | 1.834913e-51 | -8.615850e-47 |
Msa0535020 | Msa1457180 | 0.854559 | 1.135647e-61 | -8.615850e-47 |
Msa0535050 | Msa1457180 | 0.856254 | 3.642962e-62 | -8.615850e-47 |
Msa0543900 | Msa1457180 | 0.841531 | 4.492392e-58 | -8.615850e-47 |
Msa0544930 | Msa1457180 | 0.828460 | 8.881472e-55 | -8.615850e-47 |
Msa0566010 | Msa1457180 | 0.828108 | 1.079637e-54 | -8.615850e-47 |
Msa0575540 | Msa1457180 | 0.810059 | 1.391350e-50 | -8.615850e-47 |
Msa0591780 | Msa1457180 | 0.830401 | 2.998291e-55 | -8.615850e-47 |
Msa0599770 | Msa1457180 | 0.813391 | 2.620732e-51 | -8.615850e-47 |
Msa0843280 | Msa1457180 | 0.810575 | 1.076850e-50 | -8.615850e-47 |
Msa0864690 | Msa1457180 | 0.801616 | 8.280090e-49 | -8.615850e-47 |
Msa0887000 | Msa1457180 | 0.819000 | 1.461307e-52 | -8.615850e-47 |
Msa0922340 | Msa1457180 | 0.802392 | 5.733992e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1457180 | MtrunA17_Chr1g0153371 | 96.266 | 482 | 18 | 0 | 1 | 482 | 1 | 482 | 0.0 | 964 |
Msa1457180 | MtrunA17_Chr4g0044851 | 68.000 | 450 | 139 | 3 | 22 | 468 | 22 | 469 | 0.0 | 647 |
Msa1457180 | MtrunA17_Chr4g0044841 | 66.960 | 454 | 145 | 4 | 19 | 469 | 21 | 472 | 0.0 | 638 |
Msa1457180 | MtrunA17_Chr8g0369791 | 55.054 | 465 | 193 | 6 | 6 | 467 | 12 | 463 | 0.0 | 535 |
Msa1457180 | MtrunA17_Chr5g0408181 | 54.915 | 468 | 197 | 6 | 5 | 467 | 3 | 461 | 0.0 | 528 |
Msa1457180 | MtrunA17_Chr1g0164371 | 51.812 | 469 | 214 | 5 | 1 | 465 | 12 | 472 | 7.82e-165 | 474 |
Msa1457180 | MtrunA17_Chr2g0293421 | 31.656 | 477 | 309 | 10 | 8 | 472 | 20 | 491 | 3.16e-81 | 260 |
Msa1457180 | MtrunA17_Chr2g0293411 | 32.231 | 484 | 306 | 12 | 6 | 471 | 10 | 489 | 2.79e-78 | 252 |
Msa1457180 | MtrunA17_Chr7g0226771 | 33.860 | 443 | 275 | 9 | 9 | 440 | 7 | 442 | 3.43e-78 | 252 |
Msa1457180 | MtrunA17_Chr6g0455461 | 32.110 | 436 | 283 | 9 | 35 | 465 | 33 | 460 | 2.35e-76 | 246 |
Msa1457180 | MtrunA17_Chr8g0341951 | 32.009 | 453 | 287 | 12 | 1 | 440 | 1 | 445 | 2.23e-74 | 242 |
Msa1457180 | MtrunA17_Chr7g0219961 | 30.805 | 435 | 291 | 7 | 35 | 466 | 33 | 460 | 5.16e-74 | 240 |
Msa1457180 | MtrunA17_Chr8g0381541 | 31.667 | 480 | 312 | 8 | 6 | 472 | 16 | 492 | 7.17e-74 | 241 |
Msa1457180 | MtrunA17_Chr3g0078411 | 31.034 | 435 | 289 | 8 | 35 | 465 | 33 | 460 | 1.74e-73 | 239 |
Msa1457180 | MtrunA17_Chr5g0443401 | 32.500 | 480 | 302 | 11 | 1 | 465 | 1 | 473 | 4.88e-73 | 238 |
Msa1457180 | MtrunA17_Chr3g0113321 | 32.536 | 418 | 262 | 7 | 34 | 438 | 28 | 438 | 7.39e-73 | 238 |
Msa1457180 | MtrunA17_Chr8g0388921 | 30.737 | 475 | 312 | 8 | 3 | 467 | 8 | 475 | 1.08e-71 | 235 |
Msa1457180 | MtrunA17_Chr5g0403931 | 31.743 | 482 | 313 | 9 | 2 | 470 | 3 | 481 | 2.55e-71 | 234 |
Msa1457180 | MtrunA17_Chr8g0381571 | 32.366 | 448 | 287 | 8 | 6 | 440 | 16 | 460 | 9.77e-71 | 232 |
Msa1457180 | MtrunA17_Chr3g0089361 | 32.018 | 456 | 293 | 10 | 23 | 468 | 28 | 476 | 3.89e-70 | 231 |
Msa1457180 | MtrunA17_Chr5g0443731 | 31.473 | 448 | 291 | 6 | 27 | 462 | 21 | 464 | 1.96e-68 | 226 |
Msa1457180 | MtrunA17_Chr3g0107511 | 30.655 | 473 | 311 | 7 | 9 | 466 | 8 | 478 | 2.03e-68 | 226 |
Msa1457180 | MtrunA17_Chr5g0400421 | 31.198 | 484 | 313 | 11 | 1 | 465 | 4 | 486 | 1.09e-66 | 222 |
Msa1457180 | MtrunA17_Chr3g0107501 | 30.512 | 449 | 300 | 6 | 28 | 465 | 26 | 473 | 7.33e-66 | 219 |
Msa1457180 | MtrunA17_Chr3g0141801 | 31.130 | 469 | 307 | 8 | 9 | 465 | 16 | 480 | 1.01e-64 | 217 |
Msa1457180 | MtrunA17_Chr8g0372711 | 30.682 | 440 | 296 | 5 | 7 | 439 | 17 | 454 | 2.63e-64 | 216 |
Msa1457180 | MtrunA17_Chr5g0400411 | 31.546 | 485 | 309 | 12 | 1 | 465 | 4 | 485 | 7.74e-63 | 212 |
Msa1457180 | MtrunA17_Chr8g0373441 | 32.151 | 423 | 258 | 12 | 4 | 411 | 7 | 415 | 1.26e-62 | 209 |
Msa1457180 | MtrunA17_Chr5g0397971 | 29.882 | 425 | 286 | 7 | 25 | 440 | 21 | 442 | 2.27e-61 | 208 |
Msa1457180 | MtrunA17_Chr8g0339861 | 30.390 | 487 | 314 | 14 | 1 | 472 | 13 | 489 | 7.81e-61 | 206 |
Msa1457180 | MtrunA17_Chr8g0372411 | 29.808 | 416 | 277 | 8 | 36 | 440 | 40 | 451 | 1.15e-60 | 206 |
Msa1457180 | MtrunA17_Chr3g0089351 | 30.402 | 398 | 268 | 8 | 70 | 465 | 1 | 391 | 1.39e-60 | 203 |
Msa1457180 | MtrunA17_Chr8g0380471 | 28.238 | 471 | 323 | 7 | 4 | 465 | 8 | 472 | 6.71e-60 | 204 |
Msa1457180 | MtrunA17_Chr8g0380931 | 29.374 | 463 | 302 | 8 | 19 | 465 | 48 | 501 | 3.31e-58 | 200 |
Msa1457180 | MtrunA17_Chr6g0478161 | 28.256 | 453 | 304 | 8 | 2 | 440 | 17 | 462 | 1.53e-55 | 192 |
Msa1457180 | MtrunA17_Chr8g0381551 | 28.931 | 318 | 212 | 6 | 6 | 312 | 16 | 330 | 1.59e-34 | 132 |
Msa1457180 | MtrunA17_Chr8g0334891 | 25.885 | 452 | 292 | 16 | 26 | 456 | 32 | 461 | 2.70e-32 | 129 |
Msa1457180 | MtrunA17_Chr1g0161671 | 29.333 | 300 | 199 | 6 | 21 | 310 | 17 | 313 | 2.71e-32 | 125 |
Msa1457180 | MtrunA17_Chr4g0000151 | 37.324 | 142 | 87 | 2 | 332 | 472 | 5 | 145 | 6.82e-29 | 111 |
Msa1457180 | MtrunA17_Chr5g0404861 | 42.975 | 121 | 66 | 1 | 326 | 443 | 15 | 135 | 9.67e-29 | 111 |
Msa1457180 | MtrunA17_Chr1g0162811 | 27.594 | 453 | 287 | 17 | 1 | 420 | 1 | 445 | 9.88e-28 | 115 |
Msa1457180 | MtrunA17_Chr8g0381561 | 44.231 | 104 | 57 | 1 | 338 | 440 | 8 | 111 | 5.87e-26 | 102 |
Msa1457180 | MtrunA17_Chr6g0463551 | 29.444 | 180 | 118 | 3 | 193 | 365 | 12 | 189 | 9.42e-26 | 104 |
Msa1457180 | MtrunA17_Chr8g0334941 | 29.615 | 260 | 155 | 8 | 210 | 456 | 62 | 306 | 2.29e-25 | 106 |
Msa1457180 | MtrunA17_Chr8g0361471 | 25.586 | 469 | 298 | 18 | 10 | 435 | 5 | 465 | 3.12e-24 | 105 |
Msa1457180 | MtrunA17_Chr4g0013471 | 26.282 | 312 | 206 | 8 | 27 | 327 | 35 | 333 | 7.07e-24 | 103 |
Msa1457180 | MtrunA17_Chr4g0000161 | 28.475 | 295 | 195 | 7 | 29 | 312 | 37 | 326 | 1.03e-23 | 102 |
Msa1457180 | MtrunA17_Chr4g0004601 | 24.221 | 417 | 269 | 14 | 65 | 448 | 107 | 509 | 1.41e-23 | 103 |
Msa1457180 | MtrunA17_Chr7g0235261 | 23.684 | 418 | 272 | 14 | 64 | 448 | 85 | 488 | 5.63e-23 | 101 |
Msa1457180 | MtrunA17_Chr2g0310391 | 24.153 | 472 | 310 | 15 | 8 | 443 | 2 | 461 | 7.66e-23 | 101 |
Msa1457180 | MtrunA17_Chr2g0310381 | 24.286 | 490 | 310 | 16 | 9 | 464 | 6 | 468 | 1.21e-22 | 100 |
Msa1457180 | MtrunA17_Chr5g0437001 | 41.667 | 108 | 59 | 1 | 333 | 436 | 1 | 108 | 1.27e-22 | 94.4 |
Msa1457180 | MtrunA17_Chr4g0000171 | 27.273 | 297 | 200 | 7 | 27 | 312 | 35 | 326 | 1.79e-22 | 98.2 |
Msa1457180 | MtrunA17_Chr6g0465511 | 24.839 | 467 | 304 | 18 | 10 | 435 | 5 | 465 | 2.17e-22 | 100 |
Msa1457180 | MtrunA17_Chr5g0436981 | 33.537 | 164 | 103 | 3 | 28 | 185 | 21 | 184 | 2.83e-22 | 94.4 |
Msa1457180 | MtrunA17_Chr6g0466331 | 24.839 | 467 | 304 | 18 | 10 | 435 | 5 | 465 | 3.34e-22 | 99.4 |
Msa1457180 | MtrunA17_Chr3g0101671 | 25.109 | 458 | 288 | 18 | 7 | 420 | 4 | 450 | 7.54e-22 | 98.6 |
Msa1457180 | MtrunA17_Chr4g0035921 | 25.100 | 502 | 296 | 19 | 1 | 443 | 1 | 481 | 1.58e-21 | 97.4 |
Msa1457180 | MtrunA17_Chr5g0404881 | 29.464 | 224 | 149 | 5 | 6 | 223 | 7 | 227 | 1.90e-21 | 93.2 |
Msa1457180 | MtrunA17_Chr1g0160851 | 24.580 | 476 | 304 | 16 | 9 | 445 | 8 | 467 | 2.70e-21 | 96.7 |
Msa1457180 | MtrunA17_Chr3g0089381 | 33.750 | 160 | 105 | 1 | 206 | 365 | 34 | 192 | 7.49e-21 | 90.9 |
Msa1457180 | MtrunA17_Chr2g0286091 | 24.370 | 476 | 305 | 15 | 35 | 468 | 41 | 503 | 8.95e-21 | 95.1 |
Msa1457180 | MtrunA17_Chr5g0405001 | 23.617 | 470 | 307 | 14 | 10 | 443 | 28 | 481 | 1.05e-20 | 95.1 |
Msa1457180 | MtrunA17_Chr5g0403351 | 23.591 | 479 | 322 | 16 | 1 | 443 | 1 | 471 | 1.59e-20 | 94.4 |
Msa1457180 | MtrunA17_Chr6g0463561 | 31.875 | 160 | 100 | 3 | 5 | 159 | 12 | 167 | 2.18e-20 | 89.0 |
Msa1457180 | MtrunA17_Chr6g0463541 | 39.423 | 104 | 63 | 0 | 361 | 464 | 2 | 105 | 2.19e-20 | 86.3 |
Msa1457180 | MtrunA17_Chr1g0162801 | 24.641 | 487 | 295 | 18 | 1 | 435 | 1 | 467 | 3.76e-20 | 93.2 |
Msa1457180 | MtrunA17_Chr6g0458561 | 23.279 | 494 | 297 | 19 | 8 | 443 | 28 | 497 | 5.48e-20 | 92.8 |
Msa1457180 | MtrunA17_Chr8g0362731 | 25.907 | 386 | 240 | 15 | 95 | 448 | 15 | 386 | 5.56e-20 | 92.0 |
Msa1457180 | MtrunA17_Chr8g0336361 | 23.266 | 447 | 276 | 13 | 64 | 448 | 95 | 536 | 5.70e-20 | 92.8 |
Msa1457180 | MtrunA17_Chr4g0020041 | 23.711 | 485 | 305 | 16 | 1 | 439 | 1 | 466 | 6.48e-20 | 92.4 |
Msa1457180 | MtrunA17_Chr3g0101631 | 24.342 | 456 | 294 | 17 | 1 | 420 | 1 | 441 | 6.71e-20 | 92.4 |
Msa1457180 | MtrunA17_Chr5g0445421 | 23.908 | 435 | 287 | 13 | 11 | 424 | 91 | 502 | 1.29e-19 | 91.7 |
Msa1457180 | MtrunA17_Chr3g0101751 | 25.607 | 453 | 290 | 20 | 8 | 421 | 10 | 454 | 2.11e-19 | 90.9 |
Msa1457180 | MtrunA17_Chr3g0101701 | 24.318 | 440 | 300 | 14 | 11 | 420 | 14 | 450 | 2.25e-19 | 90.9 |
Msa1457180 | MtrunA17_Chr5g0403321 | 24.520 | 469 | 282 | 17 | 27 | 443 | 26 | 474 | 4.09e-19 | 90.1 |
Msa1457180 | MtrunA17_Chr5g0431511 | 24.888 | 446 | 290 | 16 | 35 | 443 | 33 | 470 | 4.71e-19 | 89.7 |
Msa1457180 | MtrunA17_Chr8g0382901 | 22.926 | 458 | 305 | 16 | 4 | 436 | 2 | 436 | 6.01e-19 | 90.5 |
Msa1457180 | MtrunA17_Chr8g0382901 | 22.323 | 439 | 303 | 15 | 28 | 436 | 485 | 915 | 6.53e-15 | 77.8 |
Msa1457180 | MtrunA17_Chr3g0089291 | 27.615 | 239 | 165 | 7 | 70 | 306 | 1 | 233 | 7.62e-19 | 85.5 |
Msa1457180 | MtrunA17_Chr3g0101621 | 23.947 | 451 | 288 | 17 | 8 | 420 | 3 | 436 | 8.19e-19 | 89.0 |
Msa1457180 | MtrunA17_Chr3g0135841 | 30.738 | 244 | 141 | 7 | 213 | 439 | 271 | 503 | 8.49e-19 | 89.4 |
Msa1457180 | MtrunA17_Chr3g0101611 | 24.017 | 458 | 299 | 17 | 24 | 444 | 27 | 472 | 1.58e-18 | 88.2 |
Msa1457180 | MtrunA17_Chr3g0101581 | 23.799 | 437 | 294 | 15 | 16 | 420 | 18 | 447 | 1.83e-18 | 88.2 |
Msa1457180 | MtrunA17_Chr1g0174451 | 23.093 | 472 | 300 | 13 | 1 | 424 | 1 | 457 | 2.02e-18 | 87.8 |
Msa1457180 | MtrunA17_Chr8g0377341 | 25.546 | 458 | 284 | 20 | 7 | 424 | 38 | 478 | 2.35e-18 | 87.8 |
Msa1457180 | MtrunA17_Chr3g0101711 | 21.854 | 453 | 317 | 16 | 1 | 420 | 1 | 449 | 4.29e-18 | 87.0 |
Msa1457180 | MtrunA17_Chr5g0446151 | 24.779 | 452 | 294 | 17 | 21 | 439 | 27 | 465 | 4.70e-18 | 86.7 |
Msa1457180 | MtrunA17_Chr3g0116741 | 23.701 | 481 | 302 | 18 | 1 | 439 | 22 | 479 | 7.73e-18 | 86.3 |
Msa1457180 | MtrunA17_Chr1g0167321 | 25.664 | 452 | 297 | 17 | 1 | 420 | 1 | 445 | 8.69e-18 | 85.9 |
Msa1457180 | MtrunA17_Chr7g0246221 | 22.432 | 477 | 309 | 16 | 10 | 439 | 5 | 467 | 1.83e-17 | 85.1 |
Msa1457180 | MtrunA17_Chr3g0101801 | 23.868 | 486 | 305 | 21 | 1 | 435 | 1 | 472 | 2.02e-17 | 84.7 |
Msa1457180 | MtrunA17_Chr3g0101831 | 24.558 | 452 | 293 | 18 | 10 | 421 | 5 | 448 | 2.14e-17 | 84.7 |
Msa1457180 | MtrunA17_Chr4g0046351 | 26.210 | 248 | 158 | 8 | 227 | 455 | 245 | 486 | 2.50e-17 | 84.7 |
Msa1457180 | MtrunA17_Chr5g0431501 | 24.887 | 442 | 295 | 14 | 35 | 443 | 33 | 470 | 2.54e-17 | 84.3 |
Msa1457180 | MtrunA17_Chr5g0431461 | 24.887 | 442 | 295 | 14 | 35 | 443 | 33 | 470 | 2.54e-17 | 84.3 |
Msa1457180 | MtrunA17_Chr3g0101821 | 21.983 | 464 | 326 | 15 | 7 | 439 | 7 | 465 | 3.13e-17 | 84.3 |
Msa1457180 | MtrunA17_Chr8g0355961 | 23.480 | 477 | 282 | 19 | 3 | 424 | 7 | 455 | 3.42e-17 | 84.0 |
Msa1457180 | MtrunA17_Chr3g0101761 | 22.766 | 470 | 314 | 18 | 8 | 435 | 3 | 465 | 4.40e-17 | 84.0 |
Msa1457180 | MtrunA17_Chr5g0446161 | 23.617 | 470 | 312 | 15 | 3 | 439 | 9 | 464 | 5.51e-17 | 83.6 |
Msa1457180 | MtrunA17_Chr6g0457421 | 28.099 | 242 | 157 | 6 | 214 | 443 | 244 | 480 | 6.16e-17 | 83.2 |
Msa1457180 | MtrunA17_Chr4g0024771 | 22.426 | 437 | 304 | 16 | 11 | 420 | 17 | 445 | 6.36e-17 | 83.2 |
Msa1457180 | MtrunA17_Chr3g0101651 | 22.973 | 444 | 301 | 15 | 11 | 420 | 14 | 450 | 6.62e-17 | 83.2 |
Msa1457180 | MtrunA17_Chr3g0101601 | 23.282 | 451 | 297 | 16 | 8 | 420 | 3 | 442 | 7.27e-17 | 83.2 |
Msa1457180 | MtrunA17_Chr8g0372251 | 22.482 | 427 | 283 | 11 | 33 | 420 | 33 | 450 | 1.25e-16 | 82.4 |
Msa1457180 | MtrunA17_Chr5g0395381 | 21.627 | 467 | 294 | 16 | 5 | 439 | 10 | 436 | 1.37e-16 | 82.0 |
Msa1457180 | MtrunA17_Chr6g0463801 | 24.419 | 430 | 273 | 15 | 27 | 420 | 29 | 442 | 1.66e-16 | 82.0 |
Msa1457180 | MtrunA17_Chr4g0058191 | 22.822 | 482 | 317 | 16 | 9 | 451 | 1 | 466 | 1.76e-16 | 82.0 |
Msa1457180 | MtrunA17_Chr8g0364081 | 21.961 | 510 | 329 | 16 | 4 | 450 | 20 | 523 | 2.09e-16 | 81.6 |
Msa1457180 | MtrunA17_Chr8g0339331 | 24.464 | 466 | 298 | 19 | 24 | 443 | 27 | 484 | 2.13e-16 | 81.6 |
Msa1457180 | MtrunA17_Chr1g0161641 | 40.789 | 76 | 44 | 1 | 366 | 440 | 13 | 88 | 2.26e-16 | 74.3 |
Msa1457180 | MtrunA17_Chr3g0101661 | 23.348 | 454 | 309 | 15 | 1 | 420 | 1 | 449 | 2.64e-16 | 81.3 |
Msa1457180 | MtrunA17_Chr1g0160861 | 25.000 | 228 | 158 | 5 | 228 | 446 | 86 | 309 | 3.41e-16 | 79.7 |
Msa1457180 | MtrunA17_Chr7g0218611 | 23.568 | 454 | 304 | 13 | 25 | 443 | 23 | 468 | 3.43e-16 | 80.9 |
Msa1457180 | MtrunA17_Chr1g0207841 | 27.132 | 258 | 152 | 8 | 220 | 450 | 241 | 489 | 4.19e-16 | 80.9 |
Msa1457180 | MtrunA17_Chr5g0445441 | 23.362 | 458 | 299 | 15 | 3 | 424 | 49 | 490 | 4.91e-16 | 80.5 |
Msa1457180 | MtrunA17_Chr3g0101691 | 22.500 | 440 | 308 | 13 | 11 | 420 | 14 | 450 | 5.90e-16 | 80.1 |
Msa1457180 | MtrunA17_Chr5g0400391 | 36.667 | 90 | 56 | 1 | 384 | 472 | 2 | 91 | 6.25e-16 | 73.6 |
Msa1457180 | MtrunA17_Chr3g0101571 | 23.266 | 447 | 297 | 17 | 11 | 420 | 7 | 444 | 6.53e-16 | 80.1 |
Msa1457180 | MtrunA17_Chr2g0314721 | 24.752 | 505 | 317 | 19 | 6 | 469 | 15 | 497 | 6.68e-16 | 80.1 |
Msa1457180 | MtrunA17_Chr5g0401681 | 22.727 | 484 | 305 | 15 | 5 | 445 | 6 | 463 | 6.78e-16 | 80.1 |
Msa1457180 | MtrunA17_Chr2g0280261 | 24.424 | 434 | 284 | 14 | 24 | 425 | 23 | 444 | 7.78e-16 | 79.7 |
Msa1457180 | MtrunA17_Chr7g0258221 | 23.377 | 462 | 294 | 14 | 9 | 424 | 8 | 455 | 9.50e-16 | 79.7 |
Msa1457180 | MtrunA17_Chr5g0445381 | 23.620 | 453 | 287 | 16 | 11 | 424 | 48 | 480 | 1.19e-15 | 79.3 |
Msa1457180 | MtrunA17_Chr4g0058201 | 22.517 | 453 | 309 | 17 | 32 | 451 | 25 | 468 | 1.92e-15 | 78.6 |
Msa1457180 | MtrunA17_Chr3g0128461 | 22.673 | 419 | 285 | 14 | 59 | 447 | 92 | 501 | 2.37e-15 | 78.6 |
Msa1457180 | MtrunA17_Chr4g0046321 | 25.306 | 245 | 160 | 8 | 227 | 453 | 245 | 484 | 2.58e-15 | 78.2 |
Msa1457180 | MtrunA17_Chr4g0046331 | 25.403 | 248 | 158 | 8 | 227 | 453 | 245 | 486 | 2.95e-15 | 78.2 |
Msa1457180 | MtrunA17_Chr3g0116681 | 23.355 | 471 | 326 | 16 | 1 | 443 | 8 | 471 | 3.23e-15 | 78.2 |
Msa1457180 | MtrunA17_Chr4g0058281 | 21.915 | 470 | 321 | 15 | 4 | 439 | 20 | 477 | 3.40e-15 | 77.8 |
Msa1457180 | MtrunA17_Chr2g0296651 | 22.826 | 460 | 293 | 16 | 5 | 424 | 5 | 442 | 6.30e-15 | 77.0 |
Msa1457180 | MtrunA17_Chr3g0101721 | 23.176 | 466 | 320 | 15 | 12 | 445 | 14 | 473 | 9.79e-15 | 76.6 |
Msa1457180 | MtrunA17_Chr8g0390881 | 21.121 | 464 | 317 | 15 | 10 | 436 | 14 | 465 | 1.33e-14 | 76.3 |
Msa1457180 | MtrunA17_Chr4g0039901 | 22.494 | 449 | 294 | 15 | 30 | 439 | 30 | 463 | 1.71e-14 | 75.9 |
Msa1457180 | MtrunA17_Chr1g0161661 | 39.759 | 83 | 49 | 1 | 384 | 465 | 14 | 96 | 3.79e-14 | 68.2 |
Msa1457180 | MtrunA17_Chr5g0401691 | 21.766 | 487 | 303 | 16 | 5 | 445 | 26 | 480 | 5.60e-14 | 74.3 |
Msa1457180 | MtrunA17_Chr7g0215181 | 27.572 | 243 | 156 | 7 | 215 | 443 | 246 | 482 | 1.15e-13 | 73.2 |
Msa1457180 | MtrunA17_Chr5g0436991 | 29.661 | 118 | 78 | 2 | 194 | 310 | 43 | 156 | 1.24e-13 | 68.6 |
Msa1457180 | MtrunA17_Chr2g0288661 | 21.739 | 437 | 286 | 13 | 43 | 448 | 85 | 496 | 2.15e-13 | 72.4 |
Msa1457180 | MtrunA17_Chr5g0396521 | 23.963 | 217 | 127 | 5 | 264 | 446 | 333 | 545 | 2.48e-13 | 72.4 |
Msa1457180 | MtrunA17_Chr1g0176831 | 23.307 | 502 | 322 | 17 | 6 | 466 | 34 | 513 | 2.96e-13 | 72.0 |
Msa1457180 | MtrunA17_Chr0c19g0493771 | 22.467 | 227 | 157 | 5 | 229 | 444 | 403 | 621 | 3.24e-13 | 72.0 |
Msa1457180 | MtrunA17_Chr1g0200951 | 21.465 | 396 | 268 | 12 | 80 | 440 | 109 | 496 | 5.95e-13 | 70.9 |
Msa1457180 | MtrunA17_Chr8g0344191 | 23.011 | 465 | 287 | 19 | 10 | 424 | 44 | 487 | 6.02e-13 | 70.9 |
Msa1457180 | MtrunA17_Chr4g0030711 | 26.275 | 255 | 160 | 8 | 220 | 450 | 240 | 490 | 6.85e-13 | 70.9 |
Msa1457180 | MtrunA17_Chr2g0313831 | 23.333 | 360 | 244 | 9 | 112 | 443 | 134 | 489 | 8.80e-13 | 70.5 |
Msa1457180 | MtrunA17_Chr8g0370641 | 26.606 | 218 | 146 | 6 | 232 | 439 | 272 | 485 | 1.58e-12 | 69.7 |
Msa1457180 | MtrunA17_Chr8g0354531 | 23.214 | 392 | 259 | 13 | 104 | 461 | 254 | 637 | 1.63e-12 | 69.7 |
Msa1457180 | MtrunA17_Chr5g0431641 | 23.007 | 439 | 298 | 15 | 13 | 420 | 16 | 445 | 2.10e-12 | 69.3 |
Msa1457180 | MtrunA17_Chr5g0395321 | 26.126 | 222 | 148 | 6 | 228 | 439 | 246 | 461 | 2.50e-12 | 68.9 |
Msa1457180 | MtrunA17_Chr8g0387101 | 23.239 | 426 | 281 | 13 | 59 | 444 | 58 | 477 | 2.53e-12 | 68.9 |
Msa1457180 | MtrunA17_Chr7g0218601 | 25.571 | 219 | 150 | 4 | 232 | 443 | 255 | 467 | 2.65e-12 | 68.9 |
Msa1457180 | MtrunA17_Chr2g0313761 | 21.429 | 434 | 291 | 12 | 43 | 448 | 78 | 489 | 2.92e-12 | 68.9 |
Msa1457180 | MtrunA17_Chr5g0419451 | 22.803 | 421 | 286 | 15 | 51 | 440 | 73 | 485 | 3.06e-12 | 68.6 |
Msa1457180 | MtrunA17_Chr1g0193811 | 21.698 | 424 | 272 | 13 | 81 | 463 | 106 | 510 | 3.55e-12 | 68.6 |
Msa1457180 | MtrunA17_Chr1g0179811 | 22.348 | 443 | 293 | 14 | 60 | 462 | 101 | 532 | 3.60e-12 | 68.6 |
Msa1457180 | MtrunA17_Chr3g0089371 | 26.316 | 152 | 100 | 5 | 23 | 165 | 28 | 176 | 3.63e-12 | 65.9 |
Msa1457180 | MtrunA17_Chr7g0246181 | 24.528 | 477 | 311 | 17 | 1 | 439 | 1 | 466 | 4.07e-12 | 68.2 |
Msa1457180 | MtrunA17_Chr8g0370651 | 26.606 | 218 | 146 | 6 | 232 | 439 | 276 | 489 | 4.41e-12 | 68.2 |
Msa1457180 | MtrunA17_Chr6g0484811 | 21.941 | 474 | 320 | 17 | 8 | 443 | 12 | 473 | 4.53e-12 | 68.2 |
Msa1457180 | MtrunA17_Chr1g0161651 | 23.390 | 295 | 165 | 7 | 27 | 267 | 35 | 322 | 5.04e-12 | 67.0 |
Msa1457180 | MtrunA17_Chr4g0058211 | 25.532 | 188 | 131 | 3 | 270 | 451 | 10 | 194 | 5.73e-12 | 65.1 |
Msa1457180 | MtrunA17_Chr4g0039391 | 24.229 | 227 | 161 | 6 | 227 | 446 | 251 | 473 | 7.57e-12 | 67.4 |
Msa1457180 | MtrunA17_Chr5g0431671 | 21.429 | 420 | 295 | 13 | 30 | 420 | 33 | 446 | 7.68e-12 | 67.4 |
Msa1457180 | MtrunA17_Chr7g0262111 | 24.814 | 403 | 271 | 14 | 67 | 447 | 90 | 482 | 7.95e-12 | 67.4 |
Msa1457180 | MtrunA17_Chr2g0313801 | 22.102 | 371 | 248 | 11 | 110 | 448 | 133 | 494 | 8.05e-12 | 67.4 |
Msa1457180 | MtrunA17_Chr5g0446131 | 23.529 | 425 | 268 | 14 | 43 | 433 | 81 | 482 | 8.68e-12 | 67.4 |
Msa1457180 | MtrunA17_Chr4g0017411 | 26.425 | 193 | 136 | 4 | 233 | 424 | 243 | 430 | 8.86e-12 | 67.0 |
Msa1457180 | MtrunA17_Chr4g0076161 | 21.250 | 480 | 316 | 15 | 6 | 443 | 12 | 471 | 1.25e-11 | 66.6 |
Msa1457180 | MtrunA17_Chr1g0164211 | 24.454 | 229 | 158 | 7 | 228 | 446 | 242 | 465 | 1.60e-11 | 66.2 |
Msa1457180 | MtrunA17_Chr2g0280011 | 29.348 | 184 | 115 | 5 | 280 | 450 | 9 | 190 | 1.81e-11 | 63.5 |
Msa1457180 | MtrunA17_Chr1g0184461 | 21.756 | 501 | 293 | 21 | 8 | 441 | 5 | 473 | 2.18e-11 | 65.9 |
Msa1457180 | MtrunA17_Chr4g0063221 | 22.145 | 429 | 297 | 13 | 59 | 459 | 86 | 505 | 2.22e-11 | 65.9 |
Msa1457180 | MtrunA17_Chr7g0246151 | 26.244 | 221 | 151 | 6 | 227 | 439 | 250 | 466 | 2.25e-11 | 65.9 |
Msa1457180 | MtrunA17_Chr2g0296661 | 26.020 | 196 | 141 | 3 | 231 | 425 | 256 | 448 | 2.39e-11 | 65.9 |
Msa1457180 | MtrunA17_Chr3g0086691 | 27.642 | 246 | 158 | 8 | 213 | 443 | 234 | 474 | 3.84e-11 | 65.1 |
Msa1457180 | MtrunA17_Chr4g0053621 | 22.059 | 476 | 280 | 20 | 7 | 425 | 6 | 447 | 3.89e-11 | 65.1 |
Msa1457180 | MtrunA17_Chr4g0030701 | 25.896 | 251 | 159 | 7 | 220 | 447 | 238 | 484 | 5.55e-11 | 64.7 |
Msa1457180 | MtrunA17_Chr4g0046631 | 23.007 | 439 | 287 | 22 | 25 | 420 | 35 | 465 | 5.60e-11 | 64.7 |
Msa1457180 | MtrunA17_Chr3g0086661 | 28.745 | 247 | 154 | 9 | 213 | 443 | 234 | 474 | 6.17e-11 | 64.7 |
Msa1457180 | MtrunA17_Chr4g0052881 | 23.116 | 199 | 145 | 4 | 228 | 424 | 251 | 443 | 8.00e-11 | 64.3 |
Msa1457180 | MtrunA17_Chr3g0086651 | 28.049 | 246 | 157 | 8 | 213 | 443 | 234 | 474 | 9.83e-11 | 63.9 |
Msa1457180 | MtrunA17_Chr2g0313791 | 21.884 | 361 | 237 | 9 | 120 | 448 | 142 | 489 | 9.86e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1457180 | AT3G19270.2 | 66.517 | 445 | 145 | 3 | 27 | 470 | 26 | 467 | 0.0 | 627 |
Msa1457180 | AT3G19270.1 | 66.988 | 415 | 133 | 3 | 27 | 440 | 26 | 437 | 0.0 | 594 |
Msa1457180 | AT4G19230.1 | 55.342 | 468 | 194 | 5 | 9 | 469 | 3 | 462 | 0.0 | 554 |
Msa1457180 | AT5G45340.1 | 56.208 | 443 | 186 | 3 | 27 | 469 | 28 | 462 | 0.0 | 550 |
Msa1457180 | AT4G19230.2 | 53.533 | 467 | 200 | 7 | 9 | 467 | 3 | 460 | 0.0 | 526 |
Msa1457180 | AT5G45340.2 | 56.386 | 415 | 173 | 3 | 27 | 441 | 28 | 434 | 0.0 | 522 |
Msa1457180 | AT2G29090.2 | 54.628 | 443 | 190 | 5 | 29 | 466 | 43 | 479 | 7.30e-174 | 498 |
Msa1457180 | AT2G29090.1 | 54.628 | 443 | 190 | 5 | 29 | 466 | 43 | 479 | 7.30e-174 | 498 |
Msa1457180 | AT2G29090.3 | 53.590 | 390 | 170 | 5 | 82 | 466 | 1 | 384 | 1.95e-146 | 424 |
Msa1457180 | AT2G29090.4 | 51.237 | 283 | 134 | 3 | 29 | 310 | 43 | 322 | 1.98e-92 | 285 |
Msa1457180 | AT1G05160.2 | 33.559 | 444 | 280 | 8 | 35 | 465 | 45 | 486 | 3.81e-84 | 268 |
Msa1457180 | AT1G05160.1 | 33.559 | 444 | 280 | 8 | 35 | 465 | 45 | 486 | 3.81e-84 | 268 |
Msa1457180 | AT2G32440.2 | 32.143 | 476 | 303 | 8 | 11 | 468 | 13 | 486 | 2.45e-80 | 258 |
Msa1457180 | AT2G32440.1 | 32.143 | 476 | 303 | 8 | 11 | 468 | 13 | 486 | 2.45e-80 | 258 |
Msa1457180 | AT5G05690.1 | 33.184 | 446 | 280 | 7 | 5 | 439 | 1 | 439 | 1.42e-72 | 237 |
Msa1457180 | AT1G19630.1 | 33.053 | 475 | 301 | 10 | 5 | 468 | 6 | 474 | 4.70e-71 | 233 |
Msa1457180 | AT5G38970.1 | 29.412 | 442 | 300 | 8 | 9 | 446 | 10 | 443 | 2.02e-70 | 231 |
Msa1457180 | AT1G19630.3 | 33.184 | 446 | 282 | 9 | 5 | 440 | 6 | 445 | 6.88e-69 | 227 |
Msa1457180 | AT3G30180.1 | 31.643 | 414 | 275 | 7 | 35 | 445 | 34 | 442 | 2.21e-68 | 226 |
Msa1457180 | AT5G36110.1 | 33.259 | 451 | 279 | 10 | 35 | 470 | 34 | 477 | 1.15e-66 | 222 |
Msa1457180 | AT3G50660.1 | 31.048 | 496 | 273 | 13 | 27 | 468 | 31 | 511 | 3.79e-65 | 219 |
Msa1457180 | AT3G13730.2 | 31.591 | 421 | 268 | 10 | 34 | 440 | 50 | 464 | 3.01e-64 | 215 |
Msa1457180 | AT1G12740.1 | 28.571 | 448 | 299 | 7 | 9 | 444 | 8 | 446 | 4.94e-64 | 215 |
Msa1457180 | AT3G13730.1 | 31.591 | 421 | 268 | 10 | 34 | 440 | 50 | 464 | 5.68e-64 | 215 |
Msa1457180 | AT5G38970.3 | 29.723 | 397 | 269 | 7 | 9 | 403 | 10 | 398 | 2.38e-63 | 212 |
Msa1457180 | AT4G36380.1 | 31.829 | 421 | 266 | 11 | 35 | 439 | 69 | 484 | 2.27e-62 | 212 |
Msa1457180 | AT1G12740.2 | 28.194 | 454 | 299 | 8 | 9 | 444 | 8 | 452 | 2.85e-62 | 210 |
Msa1457180 | AT5G05690.2 | 32.258 | 403 | 259 | 5 | 5 | 400 | 1 | 396 | 3.68e-62 | 208 |
Msa1457180 | AT1G12740.4 | 28.414 | 454 | 298 | 8 | 9 | 444 | 8 | 452 | 5.13e-62 | 210 |
Msa1457180 | AT1G19630.2 | 33.088 | 408 | 257 | 9 | 5 | 402 | 6 | 407 | 1.25e-58 | 199 |
Msa1457180 | AT2G42850.1 | 30.000 | 480 | 310 | 13 | 4 | 465 | 8 | 479 | 6.78e-58 | 199 |
Msa1457180 | AT1G55940.1 | 28.982 | 452 | 300 | 12 | 4 | 439 | 17 | 463 | 2.30e-56 | 194 |
Msa1457180 | AT5G14400.3 | 30.769 | 416 | 247 | 13 | 40 | 441 | 1 | 389 | 5.15e-56 | 191 |
Msa1457180 | AT1G55940.2 | 28.446 | 457 | 306 | 12 | 4 | 444 | 17 | 468 | 6.40e-56 | 194 |
Msa1457180 | AT5G14400.2 | 30.695 | 417 | 250 | 12 | 40 | 443 | 1 | 391 | 1.32e-55 | 191 |
Msa1457180 | AT5G38970.2 | 28.650 | 363 | 250 | 6 | 87 | 445 | 4 | 361 | 1.48e-52 | 182 |
Msa1457180 | AT5G38970.4 | 28.650 | 363 | 250 | 6 | 87 | 445 | 4 | 361 | 1.48e-52 | 182 |
Msa1457180 | AT1G78490.1 | 29.551 | 423 | 284 | 8 | 33 | 444 | 33 | 452 | 7.91e-52 | 182 |
Msa1457180 | AT5G48000.2 | 28.477 | 453 | 297 | 12 | 30 | 465 | 30 | 472 | 2.11e-51 | 181 |
Msa1457180 | AT5G48000.4 | 28.477 | 453 | 297 | 12 | 30 | 465 | 30 | 472 | 2.11e-51 | 181 |
Msa1457180 | AT5G48000.7 | 28.477 | 453 | 297 | 12 | 30 | 465 | 30 | 472 | 2.11e-51 | 181 |
Msa1457180 | AT5G48000.6 | 28.477 | 453 | 297 | 12 | 30 | 465 | 30 | 472 | 2.11e-51 | 181 |
Msa1457180 | AT5G48000.5 | 28.477 | 453 | 297 | 12 | 30 | 465 | 30 | 472 | 2.11e-51 | 181 |
Msa1457180 | AT5G48000.3 | 28.477 | 453 | 297 | 12 | 30 | 465 | 30 | 472 | 2.11e-51 | 181 |
Msa1457180 | AT1G65670.1 | 29.864 | 442 | 284 | 11 | 5 | 435 | 8 | 434 | 2.92e-51 | 181 |
Msa1457180 | AT5G48000.1 | 28.667 | 450 | 300 | 12 | 30 | 465 | 71 | 513 | 5.93e-51 | 181 |
Msa1457180 | AT1G73340.1 | 26.786 | 448 | 300 | 7 | 5 | 440 | 21 | 452 | 2.55e-50 | 179 |
Msa1457180 | AT3G44970.1 | 28.873 | 426 | 287 | 9 | 30 | 443 | 30 | 451 | 5.75e-50 | 177 |
Msa1457180 | AT3G50660.2 | 29.782 | 413 | 243 | 10 | 25 | 400 | 29 | 431 | 1.08e-49 | 176 |
Msa1457180 | AT4G15393.2 | 29.120 | 443 | 287 | 13 | 6 | 435 | 9 | 437 | 1.66e-49 | 176 |
Msa1457180 | AT5G05690.3 | 32.515 | 326 | 206 | 6 | 121 | 439 | 2 | 320 | 2.20e-49 | 173 |
Msa1457180 | AT4G15300.2 | 29.241 | 448 | 283 | 16 | 5 | 435 | 8 | 438 | 6.97e-47 | 169 |
Msa1457180 | AT4G15300.3 | 29.213 | 445 | 281 | 16 | 8 | 435 | 1 | 428 | 1.78e-46 | 168 |
Msa1457180 | AT4G15396.3 | 27.149 | 442 | 299 | 11 | 6 | 435 | 9 | 439 | 6.80e-44 | 160 |
Msa1457180 | AT4G15396.1 | 27.149 | 442 | 299 | 11 | 6 | 435 | 9 | 439 | 7.61e-44 | 161 |
Msa1457180 | AT1G12740.3 | 26.087 | 368 | 254 | 6 | 9 | 367 | 8 | 366 | 1.08e-42 | 155 |
Msa1457180 | AT1G78490.2 | 29.134 | 381 | 251 | 8 | 33 | 401 | 33 | 406 | 2.43e-42 | 155 |
Msa1457180 | AT5G14400.1 | 29.380 | 371 | 227 | 11 | 91 | 452 | 2 | 346 | 7.58e-42 | 153 |
Msa1457180 | AT4G15300.1 | 27.837 | 467 | 281 | 18 | 8 | 435 | 1 | 450 | 1.65e-40 | 152 |
Msa1457180 | AT4G15393.1 | 27.901 | 405 | 269 | 12 | 6 | 401 | 9 | 399 | 1.03e-39 | 148 |
Msa1457180 | AT4G36380.2 | 30.029 | 343 | 223 | 9 | 35 | 365 | 69 | 406 | 3.07e-39 | 147 |
Msa1457180 | AT5G14400.4 | 29.204 | 339 | 218 | 11 | 40 | 365 | 1 | 330 | 1.95e-38 | 143 |
Msa1457180 | AT5G36110.2 | 29.745 | 353 | 228 | 8 | 35 | 374 | 34 | 379 | 1.70e-37 | 142 |
Msa1457180 | AT4G15396.2 | 25.901 | 444 | 281 | 12 | 6 | 435 | 9 | 418 | 2.32e-36 | 140 |
Msa1457180 | AT4G15396.4 | 25.990 | 404 | 280 | 10 | 6 | 401 | 9 | 401 | 2.25e-35 | 136 |
Msa1457180 | AT2G42850.2 | 28.792 | 389 | 251 | 12 | 4 | 374 | 8 | 388 | 5.27e-35 | 135 |
Msa1457180 | AT4G15310.1 | 27.171 | 449 | 304 | 12 | 4 | 440 | 8 | 445 | 1.20e-34 | 135 |
Msa1457180 | AT5G36130.1 | 46.429 | 140 | 73 | 2 | 333 | 470 | 1 | 140 | 3.45e-32 | 120 |
Msa1457180 | AT1G11680.1 | 23.950 | 476 | 325 | 15 | 8 | 461 | 16 | 476 | 4.26e-30 | 123 |
Msa1457180 | AT4G15393.3 | 25.310 | 403 | 247 | 11 | 6 | 400 | 9 | 365 | 4.57e-30 | 120 |
Msa1457180 | AT3G30290.1 | 25.269 | 372 | 263 | 8 | 71 | 435 | 5 | 368 | 2.30e-29 | 119 |
Msa1457180 | AT4G13770.1 | 25.684 | 475 | 313 | 14 | 1 | 443 | 1 | 467 | 4.66e-28 | 117 |
Msa1457180 | AT5G36140.1 | 27.465 | 284 | 189 | 9 | 35 | 308 | 33 | 309 | 1.18e-24 | 104 |
Msa1457180 | AT5G25120.1 | 26.810 | 511 | 303 | 23 | 4 | 464 | 2 | 491 | 7.48e-22 | 98.6 |
Msa1457180 | AT3G44970.2 | 25.150 | 334 | 237 | 8 | 30 | 354 | 30 | 359 | 9.95e-22 | 97.1 |
Msa1457180 | AT2G45560.1 | 22.803 | 478 | 308 | 16 | 8 | 439 | 9 | 471 | 9.64e-21 | 95.5 |
Msa1457180 | AT5G67310.1 | 25.474 | 475 | 308 | 21 | 1 | 442 | 8 | 469 | 1.58e-20 | 94.7 |
Msa1457180 | AT5G25140.1 | 26.522 | 460 | 272 | 19 | 4 | 420 | 2 | 438 | 5.48e-20 | 93.2 |
Msa1457180 | AT5G57220.1 | 24.160 | 476 | 308 | 14 | 1 | 444 | 1 | 455 | 6.78e-20 | 92.8 |
Msa1457180 | AT5G25130.1 | 26.695 | 472 | 294 | 19 | 4 | 439 | 2 | 457 | 2.19e-19 | 91.3 |
Msa1457180 | AT5G04330.1 | 23.982 | 442 | 286 | 14 | 36 | 436 | 33 | 465 | 7.46e-19 | 89.7 |
Msa1457180 | AT4G37370.1 | 25.000 | 228 | 163 | 5 | 228 | 453 | 247 | 468 | 1.49e-17 | 85.5 |
Msa1457180 | AT5G24910.1 | 20.968 | 434 | 297 | 12 | 44 | 439 | 76 | 501 | 4.99e-17 | 84.3 |
Msa1457180 | AT4G37320.1 | 25.000 | 220 | 159 | 3 | 228 | 446 | 248 | 462 | 6.56e-17 | 83.6 |
Msa1457180 | AT4G37340.1 | 26.250 | 240 | 161 | 6 | 212 | 445 | 232 | 461 | 9.46e-17 | 83.2 |
Msa1457180 | AT1G50520.1 | 23.434 | 495 | 325 | 17 | 1 | 451 | 6 | 490 | 1.28e-16 | 82.8 |
Msa1457180 | AT2G45570.1 | 25.424 | 472 | 294 | 19 | 12 | 439 | 15 | 472 | 1.48e-16 | 82.8 |
Msa1457180 | AT2G34490.1 | 22.090 | 421 | 288 | 15 | 43 | 437 | 45 | 451 | 1.58e-16 | 82.4 |
Msa1457180 | AT4G37400.1 | 26.872 | 227 | 151 | 5 | 207 | 425 | 223 | 442 | 2.08e-16 | 82.0 |
Msa1457180 | AT1G74110.1 | 22.041 | 490 | 320 | 16 | 9 | 445 | 31 | 511 | 2.22e-16 | 82.0 |
Msa1457180 | AT4G36220.1 | 23.125 | 480 | 307 | 11 | 2 | 436 | 14 | 476 | 3.17e-16 | 81.6 |
Msa1457180 | AT2G45580.1 | 23.272 | 434 | 270 | 16 | 45 | 432 | 48 | 464 | 5.30e-16 | 80.9 |
Msa1457180 | AT2G45580.2 | 26.180 | 233 | 154 | 6 | 213 | 432 | 83 | 310 | 5.44e-16 | 79.7 |
Msa1457180 | AT4G37430.1 | 23.044 | 473 | 309 | 18 | 10 | 444 | 9 | 464 | 6.18e-16 | 80.5 |
Msa1457180 | AT2G26170.2 | 29.707 | 239 | 142 | 7 | 213 | 435 | 173 | 401 | 7.10e-16 | 80.1 |
Msa1457180 | AT3G20940.1 | 22.086 | 489 | 330 | 13 | 19 | 466 | 26 | 504 | 7.26e-16 | 80.5 |
Msa1457180 | AT2G26170.1 | 29.707 | 239 | 142 | 7 | 213 | 435 | 256 | 484 | 1.12e-15 | 80.1 |
Msa1457180 | AT4G37410.1 | 26.872 | 227 | 151 | 7 | 213 | 431 | 230 | 449 | 1.71e-15 | 79.3 |
Msa1457180 | AT4G27710.1 | 26.494 | 385 | 232 | 15 | 116 | 464 | 143 | 512 | 2.60e-15 | 79.0 |
Msa1457180 | AT2G28850.1 | 22.190 | 347 | 239 | 8 | 109 | 437 | 114 | 447 | 2.85e-15 | 78.6 |
Msa1457180 | AT2G34500.1 | 22.626 | 358 | 224 | 14 | 109 | 437 | 113 | 446 | 4.69e-15 | 77.8 |
Msa1457180 | AT2G24180.1 | 23.585 | 424 | 285 | 13 | 30 | 420 | 31 | 448 | 5.47e-15 | 77.8 |
Msa1457180 | AT1G66540.2 | 25.112 | 223 | 154 | 5 | 228 | 445 | 75 | 289 | 7.72e-15 | 75.9 |
Msa1457180 | AT4G37310.1 | 25.207 | 242 | 174 | 4 | 220 | 454 | 242 | 483 | 8.33e-15 | 77.0 |
Msa1457180 | AT1G66540.1 | 25.112 | 223 | 154 | 5 | 228 | 445 | 134 | 348 | 1.19e-14 | 75.9 |
Msa1457180 | AT3G28740.1 | 25.514 | 243 | 172 | 5 | 205 | 444 | 232 | 468 | 2.16e-14 | 75.9 |
Msa1457180 | AT4G37360.1 | 27.322 | 183 | 127 | 3 | 265 | 445 | 283 | 461 | 2.37e-14 | 75.9 |
Msa1457180 | AT2G45550.1 | 26.638 | 229 | 144 | 7 | 219 | 439 | 259 | 471 | 2.40e-14 | 75.9 |
Msa1457180 | AT3G53130.1 | 21.981 | 414 | 279 | 13 | 67 | 444 | 108 | 513 | 1.17e-13 | 73.6 |
Msa1457180 | AT5G57260.1 | 21.882 | 425 | 298 | 12 | 28 | 420 | 23 | 445 | 1.62e-13 | 73.2 |
Msa1457180 | AT4G15110.1 | 23.502 | 217 | 128 | 3 | 264 | 446 | 341 | 553 | 2.30e-13 | 72.8 |
Msa1457180 | AT3G52970.2 | 24.167 | 480 | 304 | 13 | 13 | 439 | 19 | 491 | 2.75e-13 | 72.4 |
Msa1457180 | AT4G37330.1 | 24.658 | 219 | 159 | 4 | 228 | 445 | 245 | 458 | 6.82e-13 | 71.2 |
Msa1457180 | AT2G22330.1 | 26.180 | 233 | 151 | 9 | 232 | 451 | 288 | 512 | 9.03e-13 | 70.9 |
Msa1457180 | AT2G22330.2 | 26.180 | 233 | 151 | 9 | 232 | 451 | 311 | 535 | 9.30e-13 | 70.9 |
Msa1457180 | AT3G52970.1 | 23.820 | 466 | 309 | 13 | 13 | 439 | 19 | 477 | 1.02e-12 | 70.5 |
Msa1457180 | AT3G53300.1 | 22.851 | 442 | 269 | 16 | 34 | 424 | 27 | 447 | 2.12e-12 | 69.7 |
Msa1457180 | AT3G26160.1 | 23.944 | 213 | 150 | 4 | 218 | 420 | 236 | 446 | 2.53e-12 | 69.3 |
Msa1457180 | AT1G64940.1 | 28.191 | 188 | 126 | 3 | 267 | 447 | 298 | 483 | 3.45e-12 | 68.9 |
Msa1457180 | AT2G23190.1 | 23.171 | 246 | 180 | 5 | 203 | 445 | 266 | 505 | 4.52e-12 | 68.6 |
Msa1457180 | AT5G07990.1 | 21.532 | 483 | 322 | 17 | 7 | 446 | 5 | 473 | 5.89e-12 | 68.2 |
Msa1457180 | AT3G26290.2 | 23.009 | 452 | 265 | 18 | 22 | 420 | 34 | 455 | 6.32e-12 | 68.2 |
Msa1457180 | AT3G26290.1 | 24.027 | 437 | 279 | 17 | 22 | 420 | 21 | 442 | 7.67e-12 | 67.8 |
Msa1457180 | AT2G46950.1 | 23.077 | 416 | 274 | 13 | 64 | 447 | 146 | 547 | 1.13e-11 | 67.4 |
Msa1457180 | AT2G23220.1 | 21.818 | 220 | 164 | 4 | 228 | 445 | 263 | 476 | 1.14e-11 | 67.4 |
Msa1457180 | AT5G36220.2 | 23.423 | 222 | 162 | 5 | 227 | 446 | 107 | 322 | 1.37e-11 | 66.2 |
Msa1457180 | AT5G36220.1 | 23.423 | 222 | 162 | 5 | 227 | 446 | 253 | 468 | 1.94e-11 | 66.6 |
Msa1457180 | AT5G42580.1 | 22.273 | 440 | 282 | 14 | 66 | 466 | 70 | 488 | 4.91e-11 | 65.5 |
Msa1457180 | AT3G48520.1 | 21.907 | 493 | 302 | 19 | 5 | 441 | 5 | 470 | 6.26e-11 | 65.1 |
Find 123 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAAATGGCATGAAAGTATT+TGG | 0.142965 | tig0038511:-19379 | Msa1457180:intergenic |
GGCATTGCTTTCCACCCTTT+TGG | 0.171251 | tig0038511:-19180 | Msa1457180:intergenic |
AGGGCTAAGGCTTCAATTTC+AGG | 0.177274 | tig0038511:-17215 | Msa1457180:intergenic |
GCTTATACCTTATAGGTAAT+TGG | 0.207342 | tig0038511:-18690 | Msa1457180:intergenic |
ATTAACTGCTTATACCTTAT+AGG | 0.209223 | tig0038511:-18697 | Msa1457180:intergenic |
AAGAGCTAAAGAAGAATTAT+TGG | 0.218720 | tig0038511:+17696 | Msa1457180:CDS |
CCAAATGATGGATCATAATA+AGG | 0.218766 | tig0038511:-19450 | Msa1457180:intergenic |
AGCCAAAGTTGAATCCATTT+TGG | 0.251756 | tig0038511:-16279 | Msa1457180:intergenic |
TCAGCTACTGCTTCTCTAAA+TGG | 0.254249 | tig0038511:-18924 | Msa1457180:intergenic |
GAAATTGGAGATAACATTAT+TGG | 0.259111 | tig0038511:+18007 | Msa1457180:CDS |
TTGGAGAAGAAGAAAAGATT+TGG | 0.286221 | tig0038511:-16449 | Msa1457180:intergenic |
AGAAGAAAAGATTTGGGTCT+TGG | 0.292356 | tig0038511:-16442 | Msa1457180:intergenic |
ATATTATCTGATGATGAAAT+TGG | 0.294172 | tig0038511:+17992 | Msa1457180:CDS |
CCCTTTCCACCATCAAATCT+TGG | 0.312974 | tig0038511:+17234 | Msa1457180:CDS |
ATGGTAAACTACAGCTGAAT+TGG | 0.316888 | tig0038511:+18649 | Msa1457180:CDS |
GTTCTAATAATACACCAAAA+TGG | 0.319205 | tig0038511:+16265 | Msa1457180:exon |
TAAATAGAGTCAAGGGGATT+TGG | 0.319677 | tig0038511:+20373 | Msa1457180:three_prime_UTR |
ATTAGAACAAGAATCTAATA+AGG | 0.320066 | tig0038511:-16250 | Msa1457180:intergenic |
AAAGAACATAAATGAAAATA+AGG | 0.325706 | tig0038511:-16327 | Msa1457180:intergenic |
CCTTATTATGATCCATCATT+TGG | 0.343940 | tig0038511:+19450 | Msa1457180:CDS |
ATATTCAAGACGAACATTCT+TGG | 0.346956 | tig0038511:+16987 | Msa1457180:CDS |
AAACATGCCAATTACCTATA+AGG | 0.352173 | tig0038511:+18683 | Msa1457180:CDS |
GGCATGAAAGTATTTGGTTT+TGG | 0.356492 | tig0038511:-19373 | Msa1457180:intergenic |
CCAAATACTTTCATGCCATT+TGG | 0.359912 | tig0038511:+19379 | Msa1457180:CDS |
CCATTCAAAGGCAATGGAAA+TGG | 0.361111 | tig0038511:-20047 | Msa1457180:intergenic |
CCTTTCCACCATCAAATCTT+GGG | 0.366162 | tig0038511:+17235 | Msa1457180:CDS |
ATCATTTGGTCGTCAAGTTT+AGG | 0.368718 | tig0038511:+19464 | Msa1457180:CDS |
CTTGAAGGGTTGAATTTATG+AGG | 0.372482 | tig0038511:-19246 | Msa1457180:intergenic |
CACCAAAATGGATTCAACTT+TGG | 0.379629 | tig0038511:+16277 | Msa1457180:exon |
CCTCGATTCACTTCGCAACT+TGG | 0.379709 | tig0038511:+17190 | Msa1457180:CDS |
TCATTTCCAACTCAAATTCC+TGG | 0.382346 | tig0038511:+17740 | Msa1457180:CDS |
CCATTTCCATTGCCTTTGAA+TGG | 0.384022 | tig0038511:+20047 | Msa1457180:CDS |
TCACACTGTGGGATTCAATA+TGG | 0.388946 | tig0038511:+20023 | Msa1457180:CDS |
AAACTTCCTCCTGGTTCAAT+GGG | 0.390178 | tig0038511:+16383 | Msa1457180:CDS |
AAGATTGGAAAAGCCTCAAC+AGG | 0.394952 | tig0038511:+20299 | Msa1457180:three_prime_UTR |
TTTACACATTCGAGAAGTTT+CGG | 0.400562 | tig0038511:-18100 | Msa1457180:intergenic |
ATTCAACCCTTCAAGATTTG+AGG | 0.401761 | tig0038511:+19254 | Msa1457180:CDS |
TGGAGAAGAAGAAAAGATTT+GGG | 0.403165 | tig0038511:-16448 | Msa1457180:intergenic |
GAAGAAAAGATTTGGGTCTT+GGG | 0.404022 | tig0038511:-16441 | Msa1457180:intergenic |
AAAAGCAAAGAACGTTTGAT+TGG | 0.407013 | tig0038511:+17095 | Msa1457180:CDS |
AAAACTTCCTCCTGGTTCAA+TGG | 0.407546 | tig0038511:+16382 | Msa1457180:CDS |
AAAAGATTAATTTATGGCTA+TGG | 0.410298 | tig0038511:-20169 | Msa1457180:intergenic |
CTTTGAATGGACTCCCAGCC+AGG | 0.412377 | tig0038511:+20060 | Msa1457180:CDS |
TGGCAATGAGCTTGCTAAGC+TGG | 0.415341 | tig0038511:+19423 | Msa1457180:CDS |
GGTCTTGGGAGTAGAGTTGA+AGG | 0.415849 | tig0038511:-16427 | Msa1457180:intergenic |
GGAAATAATTAGTGAGAGGA+AGG | 0.418556 | tig0038511:+17898 | Msa1457180:CDS |
ATTCATACCTCAAATCTTGA+AGG | 0.422368 | tig0038511:-19261 | Msa1457180:intergenic |
ATCATCACCCCAAGATTTGA+TGG | 0.427411 | tig0038511:-17243 | Msa1457180:intergenic |
GTGAGTACCATTTGCGTTTG+AGG | 0.428828 | tig0038511:+17144 | Msa1457180:CDS |
TTTAGCTCTTCCCTCAACCT+TGG | 0.449838 | tig0038511:-17683 | Msa1457180:intergenic |
CAAATGATGGATCATAATAA+GGG | 0.450882 | tig0038511:-19449 | Msa1457180:intergenic |
GATTCTCTCCAACACCTGGC+TGG | 0.454938 | tig0038511:-20074 | Msa1457180:intergenic |
TAATTTATGGCTATGGAAAG+TGG | 0.458488 | tig0038511:-20162 | Msa1457180:intergenic |
TGAAGGGTTTGTCCTATGTA+AGG | 0.459592 | tig0038511:-16410 | Msa1457180:intergenic |
GGGTTGAATTTATGAGGCTC+TGG | 0.474079 | tig0038511:-19240 | Msa1457180:intergenic |
CCAGGATTCCTAATCCCAAA+AGG | 0.474118 | tig0038511:+19165 | Msa1457180:intron |
CATTCAAAGGCAATGGAAAT+GGG | 0.474896 | tig0038511:-20046 | Msa1457180:intergenic |
TGTGTACCAGGAATTTGAGT+TGG | 0.476181 | tig0038511:-17746 | Msa1457180:intergenic |
CCAAGATTTGATGGTGGAAA+GGG | 0.481164 | tig0038511:-17234 | Msa1457180:intergenic |
AACACAAAACGTGCAGCTTC+AGG | 0.483985 | tig0038511:-17035 | Msa1457180:intergenic |
ATCAAATCTTGGGGTGATGA+TGG | 0.495039 | tig0038511:+17245 | Msa1457180:CDS |
ACTTTCATGCCATTTGGTAG+TGG | 0.497443 | tig0038511:+19385 | Msa1457180:CDS |
AGCTGTTTCTTGAATTGGAA+AGG | 0.501218 | tig0038511:+17956 | Msa1457180:CDS |
TTCCTCCTGGTTCAATGGGG+TGG | 0.506411 | tig0038511:+16387 | Msa1457180:CDS |
GCAATCTAGAGCCAAGGTTG+AGG | 0.509932 | tig0038511:+17672 | Msa1457180:CDS |
AGCTTAGCAAGCTCATTGCC+AGG | 0.510940 | tig0038511:-19421 | Msa1457180:intergenic |
TAAGCTTCCTCAAACGCAAA+TGG | 0.513067 | tig0038511:-17151 | Msa1457180:intergenic |
ATGGACTCCCAGCCAGGTGT+TGG | 0.513265 | tig0038511:+20066 | Msa1457180:CDS |
TAAACTTGACGACCAAATGA+TGG | 0.513374 | tig0038511:-19462 | Msa1457180:intergenic |
TTGAATTGGAAAGGAGAAGG+AGG | 0.514480 | tig0038511:+17965 | Msa1457180:CDS |
CAATCTAGAGCCAAGGTTGA+GGG | 0.517826 | tig0038511:+17673 | Msa1457180:CDS |
AAAATAAGGTAAGAAGAAAG+AGG | 0.522546 | tig0038511:-16313 | Msa1457180:intergenic |
ATTCTCTCCAACACCTGGCT+GGG | 0.529923 | tig0038511:-20073 | Msa1457180:intergenic |
CCCAAGATTTGATGGTGGAA+AGG | 0.538660 | tig0038511:-17235 | Msa1457180:intergenic |
TTCTTGAATTGGAAAGGAGA+AGG | 0.539562 | tig0038511:+17962 | Msa1457180:CDS |
TTTGATGGTGGAAAGGGCTA+AGG | 0.541061 | tig0038511:-17228 | Msa1457180:intergenic |
GCAAATGGTACTCACCTTGG+TGG | 0.541284 | tig0038511:-17136 | Msa1457180:intergenic |
TTTGATATAAATAGAGTCAA+GGG | 0.543565 | tig0038511:+20366 | Msa1457180:three_prime_UTR |
GTCTTGGGAGTAGAGTTGAA+GGG | 0.543626 | tig0038511:-16426 | Msa1457180:intergenic |
GTGAAGGCAAGAGAGAAACT+TGG | 0.544371 | tig0038511:+17863 | Msa1457180:intron |
GGGAGTCCATTCAAAGGCAA+TGG | 0.544618 | tig0038511:-20053 | Msa1457180:intergenic |
TGCTTTGTAGGCTGAGCAGA+AGG | 0.545509 | tig0038511:+18608 | Msa1457180:intron |
TGAAGGAAATAATTAGTGAG+AGG | 0.545555 | tig0038511:+17894 | Msa1457180:CDS |
TTTGGTATATAGGTTGGAAG+TGG | 0.546819 | tig0038511:+19995 | Msa1457180:intron |
CCACAGCTACTGTCATGACA+TGG | 0.547135 | tig0038511:+18053 | Msa1457180:CDS |
GCAATTCACAAGGAAAATGA+TGG | 0.548553 | tig0038511:+18630 | Msa1457180:CDS |
GCATGTACTCCACTACCAAA+TGG | 0.553843 | tig0038511:-19394 | None:intergenic |
TGATAACTCCAGATTAACAC+TGG | 0.555592 | tig0038511:+16179 | None:intergenic |
GGTAGATTCTCTCCAACACC+TGG | 0.557087 | tig0038511:-20078 | Msa1457180:intergenic |
GAAACTTCTCGAATGTGTAA+AGG | 0.561471 | tig0038511:+18102 | Msa1457180:CDS |
ACAAGTGCAAAACTTCCTCC+TGG | 0.564113 | tig0038511:+16374 | Msa1457180:CDS |
TTCATACCTCAAATCTTGAA+GGG | 0.564125 | tig0038511:-19260 | Msa1457180:intergenic |
AACGCAAATGGTACTCACCT+TGG | 0.565917 | tig0038511:-17139 | Msa1457180:intergenic |
TAAGGCCACCCCATTGAACC+AGG | 0.567074 | tig0038511:-16392 | Msa1457180:intergenic |
AATTATTGGATTGTTGACAA+TGG | 0.572734 | tig0038511:+17710 | Msa1457180:CDS |
TCAATGGGGTGGCCTTACAT+AGG | 0.572822 | tig0038511:+16398 | Msa1457180:CDS |
TGGATGTAAGTGTGTGATGT+TGG | 0.574017 | tig0038511:+17007 | Msa1457180:CDS |
CAGGATTCCTAATCCCAAAA+GGG | 0.575886 | tig0038511:+19166 | Msa1457180:intron |
GAAAGATACATCCCCTGTTG+AGG | 0.578717 | tig0038511:-20312 | Msa1457180:intergenic |
ATTTGATATAAATAGAGTCA+AGG | 0.579853 | tig0038511:+20365 | Msa1457180:three_prime_UTR |
TATCCTACAAAATCCCATGC+AGG | 0.583588 | tig0038511:+20264 | Msa1457180:three_prime_UTR |
GTATATAGGTTGGAAGTGGT+AGG | 0.592193 | tig0038511:+19999 | Msa1457180:intron |
CAAGTTGCGAAGTGAATCGA+GGG | 0.600200 | tig0038511:-17189 | Msa1457180:intergenic |
TGTGTTGGAGAGCATGAGAA+TGG | 0.607491 | tig0038511:+18884 | Msa1457180:CDS |
TTGATATAAATAGAGTCAAG+GGG | 0.607883 | tig0038511:+20367 | Msa1457180:three_prime_UTR |
CTTTCCACCATCAAATCTTG+GGG | 0.609532 | tig0038511:+17236 | Msa1457180:CDS |
TGATGAATATTTCTGAACAG+TGG | 0.615557 | tig0038511:-19201 | Msa1457180:intergenic |
AGTGGAGTACATGCTTGTCC+TGG | 0.616452 | tig0038511:+19403 | Msa1457180:CDS |
CCAAGTTGCGAAGTGAATCG+AGG | 0.629437 | tig0038511:-17190 | Msa1457180:intergenic |
CTGGCTGGGAGTCCATTCAA+AGG | 0.643521 | tig0038511:-20059 | Msa1457180:intergenic |
GATTCCTAATCCCAAAAGGG+TGG | 0.645660 | tig0038511:+19169 | Msa1457180:CDS |
CCATGTCATGACAGTAGCTG+TGG | 0.646176 | tig0038511:-18053 | Msa1457180:intergenic |
TGAGCAGAAGGCAATTCACA+AGG | 0.649363 | tig0038511:+18620 | Msa1457180:CDS |
GTTTGAGGAAGCTTATTCAG+AGG | 0.650161 | tig0038511:+17159 | Msa1457180:CDS |
CACAGCTACTGTCATGACAT+GGG | 0.650868 | tig0038511:+18054 | Msa1457180:CDS |
AAGTGGTAGGATCACACTGT+GGG | 0.657629 | tig0038511:+20012 | Msa1457180:CDS |
AGATTGGAAAAGCCTCAACA+GGG | 0.658055 | tig0038511:+20300 | Msa1457180:three_prime_UTR |
GTAGCTGATGTAGAGTACAA+AGG | 0.662288 | tig0038511:+18939 | Msa1457180:CDS |
ATCACCCCAAGATTTGATGG+TGG | 0.682987 | tig0038511:-17240 | Msa1457180:intergenic |
AACTTCCTCCTGGTTCAATG+GGG | 0.687690 | tig0038511:+16384 | Msa1457180:CDS |
GATTGGAAAAGCCTCAACAG+GGG | 0.706428 | tig0038511:+20301 | Msa1457180:three_prime_UTR |
GAAGTGGTAGGATCACACTG+TGG | 0.723901 | tig0038511:+20011 | Msa1457180:CDS |
GGCCACCCCATTGAACCAGG+AGG | 0.736013 | tig0038511:-16389 | Msa1457170:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTGCTTATATTAAAAAA+CGG | + | tig0038511:16708-16727 | Msa1457180:intron | 10.0% |
!!! | TAATATATTAATTTTAGGTA+CGG | + | tig0038511:16960-16979 | Msa1457180:intron | 10.0% |
!!! | ATTTAACTTAGTTTAATTTT+TGG | + | tig0038511:18150-18169 | Msa1457180:intron | 10.0% |
!! | CATTTAATTAAAAAAATGTA+TGG | - | tig0038511:19829-19848 | Msa1457180:intergenic | 10.0% |
!! | AAAGAAAAAAGATTAATTTA+TGG | - | tig0038511:20178-20197 | Msa1457180:intergenic | 10.0% |
!!! | TCAACAATTGTTTTTATATT+AGG | + | tig0038511:16217-16236 | Msa1457180:five_prime_UTR | 15.0% |
!! | AAAGAACATAAATGAAAATA+AGG | - | tig0038511:16330-16349 | Msa1457180:intergenic | 15.0% |
!!! | ATAAGTAAATTTTGACTTTT+AGG | + | tig0038511:16610-16629 | Msa1457180:intron | 15.0% |
!! | AATTAAAATGTGTCTTATAT+AGG | - | tig0038511:16910-16929 | Msa1457180:intergenic | 15.0% |
!! | AATGTAACTAAAAAACATTA+TGG | + | tig0038511:16933-16952 | Msa1457180:intron | 15.0% |
!! | ATAATAATCAATTCAATCAT+TGG | - | tig0038511:17476-17495 | Msa1457180:intergenic | 15.0% |
!!! | CTAAAAAATCTTTTATCATA+TGG | - | tig0038511:18542-18561 | Msa1457180:intergenic | 15.0% |
!! | AATAAAATGTTAGAAACAAA+AGG | + | tig0038511:19569-19588 | Msa1457180:intron | 15.0% |
!!! | CATTTGGTTTATTATTTATA+AGG | - | tig0038511:19776-19795 | Msa1457180:intergenic | 15.0% |
!!! | AATAAATGAATTTTTGCATT+TGG | - | tig0038511:19792-19811 | Msa1457180:intergenic | 15.0% |
!!! | AACTATGTAATTTTTTTCAT+AGG | + | tig0038511:20216-20235 | Msa1457180:three_prime_UTR | 15.0% |
!! | ATTAGAACAAGAATCTAATA+AGG | - | tig0038511:16253-16272 | Msa1457180:intergenic | 20.0% |
!! | TACTTATATTAAAAAACGGA+GGG | - | tig0038511:16597-16616 | Msa1457180:intergenic | 20.0% |
!! | TTACTTATATTAAAAAACGG+AGG | - | tig0038511:16598-16617 | Msa1457180:intergenic | 20.0% |
!! | TATTCAATTAATGATGTATG+TGG | + | tig0038511:16635-16654 | Msa1457180:intron | 20.0% |
!!! | ATAAGCAAATTTTGACTTTT+AGG | - | tig0038511:16699-16718 | Msa1457180:intergenic | 20.0% |
!!! | AATATCTAAAGTAGTCTTTA+TGG | + | tig0038511:16819-16838 | Msa1457180:intron | 20.0% |
!!! | ATGCATAATTAACACTTTTA+AGG | + | tig0038511:17268-17287 | Msa1457180:CDS | 20.0% |
!! | TTTAAGGAAATGAAAAAAGT+AGG | + | tig0038511:17284-17303 | Msa1457180:intron | 20.0% |
!!! | TTTACTAAATTGTTGTTATG+TGG | + | tig0038511:17549-17568 | Msa1457180:intron | 20.0% |
!!! | TTTTACTATACTTTTTGTGA+AGG | + | tig0038511:17847-17866 | Msa1457180:intron | 20.0% |
!!! | ATATTATCTGATGATGAAAT+TGG | + | tig0038511:17992-18011 | Msa1457180:CDS | 20.0% |
!!! | TAACTTAGTTTAATTTTTGG+TGG | + | tig0038511:18153-18172 | Msa1457180:intron | 20.0% |
!!! | TTTTTTTAAATACCAATCCA+TGG | + | tig0038511:18512-18531 | Msa1457180:intron | 20.0% |
!! | TAATAAACACAACAAGAATA+AGG | - | tig0038511:18824-18843 | Msa1457180:intergenic | 20.0% |
!!! | AATCTAAGAATTGAATTTTG+TGG | + | tig0038511:18849-18868 | Msa1457180:intron | 20.0% |
!!! | AAAATGGGAAATTTTTTCTA+GGG | + | tig0038511:18997-19016 | Msa1457180:intron | 20.0% |
!! | TATGAATGAGTCAATTATAA+TGG | + | tig0038511:19277-19296 | Msa1457180:intron | 20.0% |
!! | TCAATTATAATGGTAATACA+TGG | + | tig0038511:19287-19306 | Msa1457180:intron | 20.0% |
!!! | ATTTTGTTATTTGTTGATAC+AGG | + | tig0038511:19345-19364 | Msa1457180:intron | 20.0% |
!! | TTAAATGCACAAATTCATTT+AGG | + | tig0038511:19842-19861 | Msa1457180:intron | 20.0% |
!! | AAAAGATTAATTTATGGCTA+TGG | - | tig0038511:20172-20191 | Msa1457180:intergenic | 20.0% |
!!! | TATGTAATTTTTTTCATAGG+TGG | + | tig0038511:20219-20238 | Msa1457180:three_prime_UTR | 20.0% |
!!! | ATGTAATTTTTTTCATAGGT+GGG | + | tig0038511:20220-20239 | Msa1457180:three_prime_UTR | 20.0% |
!! | ATTTGATATAAATAGAGTCA+AGG | + | tig0038511:20365-20384 | Msa1457180:three_prime_UTR | 20.0% |
!! | TTTGATATAAATAGAGTCAA+GGG | + | tig0038511:20366-20385 | Msa1457180:three_prime_UTR | 20.0% |
! | GTTCTAATAATACACCAAAA+TGG | + | tig0038511:16265-16284 | Msa1457180:exon | 25.0% |
! | AAAATAAGGTAAGAAGAAAG+AGG | - | tig0038511:16316-16335 | Msa1457180:intergenic | 25.0% |
! | TAAAAATGATGAGAGAAACA+TGG | - | tig0038511:16518-16537 | Msa1457180:intergenic | 25.0% |
!!! | TGTTTCTCTCATCATTTTTA+TGG | + | tig0038511:16518-16537 | Msa1457180:intron | 25.0% |
! | GTATAAATTTAATGACTCTG+CGG | - | tig0038511:16573-16592 | Msa1457180:intergenic | 25.0% |
! | TTGCTTATATTAAAAAACGG+AGG | + | tig0038511:16711-16730 | Msa1457180:intron | 25.0% |
! | TGCTTATATTAAAAAACGGA+GGG | + | tig0038511:16712-16731 | Msa1457180:intron | 25.0% |
!! | AATTTAAAATCACGCGATAT+AGG | - | tig0038511:17352-17371 | Msa1457180:intergenic | 25.0% |
!! | CAATTTAAAACCACAATGAT+TGG | + | tig0038511:17449-17468 | Msa1457180:intron | 25.0% |
!! | TTCTGGCATTAATTTTTGTA+TGG | + | tig0038511:17525-17544 | Msa1457180:intron | 25.0% |
! | AGGGTCAATAATTAATTAAG+TGG | + | tig0038511:17594-17613 | Msa1457180:intron | 25.0% |
! | AAGAGCTAAAGAAGAATTAT+TGG | + | tig0038511:17696-17715 | Msa1457180:CDS | 25.0% |
! | AATTATTGGATTGTTGACAA+TGG | + | tig0038511:17710-17729 | Msa1457180:CDS | 25.0% |
! | GAAATTGGAGATAACATTAT+TGG | + | tig0038511:18007-18026 | Msa1457180:CDS | 25.0% |
!!! | TTAATTTTTGGTGGTTTCTA+CGG | + | tig0038511:18162-18181 | Msa1457180:intron | 25.0% |
! | ATTAACTGCTTATACCTTAT+AGG | - | tig0038511:18700-18719 | Msa1457180:intergenic | 25.0% |
!!! | TCAAACTTTGTTATTAGTCT+CGG | + | tig0038511:18753-18772 | Msa1457180:intron | 25.0% |
!! | TGAATTTTGTGGAATTTTTC+AGG | + | tig0038511:18860-18879 | Msa1457180:intron | 25.0% |
!!! | ATTTGCAAAAGCATTCAAAA+TGG | + | tig0038511:18981-19000 | Msa1457180:intron | 25.0% |
!!! | TTTGCAAAAGCATTCAAAAT+GGG | + | tig0038511:18982-19001 | Msa1457180:intron | 25.0% |
!!! | CAAAATGGGAAATTTTTTCT+AGG | + | tig0038511:18996-19015 | Msa1457180:intron | 25.0% |
! | TTCAGCATAGTATAATAGTA+TGG | - | tig0038511:19062-19081 | Msa1457180:intergenic | 25.0% |
!! | AAATGAACGTTTTTCACATT+GGG | - | tig0038511:19089-19108 | Msa1457180:intergenic | 25.0% |
!! | AAAATGAACGTTTTTCACAT+TGG | - | tig0038511:19090-19109 | Msa1457180:intergenic | 25.0% |
! | ATAATGGTAATACATGGTTA+AGG | + | tig0038511:19293-19312 | Msa1457180:intron | 25.0% |
!!! | CAAATGATGGATCATAATAA+GGG | - | tig0038511:19452-19471 | Msa1457180:intergenic | 25.0% |
! | AATAAAAAGAGATCAACGAA+TGG | + | tig0038511:19526-19545 | Msa1457180:intron | 25.0% |
!! | ATTTTATAACAAGTGCTCTT+AGG | - | tig0038511:19663-19682 | Msa1457180:intergenic | 25.0% |
! | AGAGATATTTGATCAGTTAT+TGG | - | tig0038511:19924-19943 | Msa1457180:intergenic | 25.0% |
!! | TATGTGAAAGATTTTGCTTT+TGG | + | tig0038511:19977-19996 | Msa1457180:intron | 25.0% |
!!! | AGATTTTGCTTTTGGTATAT+AGG | + | tig0038511:19985-20004 | Msa1457180:intron | 25.0% |
! | ATGCTAGAAAAAGATTCATT+GGG | + | tig0038511:20104-20123 | Msa1457180:CDS | 25.0% |
!!! | GCTTTTCCAATCTTTTTTTA+AGG | - | tig0038511:20293-20312 | Msa1457180:intergenic | 25.0% |
! | TTGATATAAATAGAGTCAAG+GGG | + | tig0038511:20367-20386 | Msa1457180:three_prime_UTR | 25.0% |
TGGAGAAGAAGAAAAGATTT+GGG | - | tig0038511:16451-16470 | Msa1457180:intergenic | 30.0% | |
TTGGAGAAGAAGAAAAGATT+TGG | - | tig0038511:16452-16471 | Msa1457180:intergenic | 30.0% | |
TCTTCTTCTCCAAACAAAAA+AGG | + | tig0038511:16459-16478 | Msa1457180:CDS | 30.0% | |
ATTTGATTCTCTGCATGAAT+TGG | - | tig0038511:16797-16816 | Msa1457180:intergenic | 30.0% | |
ATATTCAAGACGAACATTCT+TGG | + | tig0038511:16987-17006 | Msa1457180:CDS | 30.0% | |
!!! | TCTTTGCTTTTAGGATATGT+TGG | - | tig0038511:17086-17105 | Msa1457180:intergenic | 30.0% |
!! | ATCAAACGTTCTTTGCTTTT+AGG | - | tig0038511:17095-17114 | Msa1457180:intergenic | 30.0% |
AAAAGCAAAGAACGTTTGAT+TGG | + | tig0038511:17095-17114 | Msa1457180:CDS | 30.0% | |
! | TATCGCGTGATTTTAAATTG+CGG | + | tig0038511:17353-17372 | Msa1457180:intron | 30.0% |
ACTTGAATCACATTTGAGTA+AGG | - | tig0038511:17420-17439 | Msa1457180:intergenic | 30.0% | |
! | ATATTGAAGTGTCACATTTC+TGG | + | tig0038511:17508-17527 | Msa1457180:intron | 30.0% |
AAACTGCAAAAGATCAAAGA+TGG | - | tig0038511:17621-17640 | Msa1457180:intergenic | 30.0% | |
!!! | TTGCAGTTTTCTTTTGAAGT+TGG | + | tig0038511:17632-17651 | Msa1457180:intron | 30.0% |
! | GTTGGTATTCTCAAAGTTTT+TGG | + | tig0038511:17650-17669 | Msa1457180:CDS | 30.0% |
!! | ACAATACAAAAAAGCACTCT+TGG | + | tig0038511:17766-17785 | Msa1457180:CDS | 30.0% |
!!! | GAAACTTGGAAGTATTTTGA+AGG | + | tig0038511:17877-17896 | Msa1457180:CDS | 30.0% |
TGAAGGAAATAATTAGTGAG+AGG | + | tig0038511:17894-17913 | Msa1457180:CDS | 30.0% | |
!!! | TTTTGAGCTGTTTCTTGAAT+TGG | + | tig0038511:17951-17970 | Msa1457180:CDS | 30.0% |
TTTACACATTCGAGAAGTTT+CGG | - | tig0038511:18103-18122 | Msa1457180:intergenic | 30.0% | |
! | TTTGAGTGAACTTTAACTTC+TGG | - | tig0038511:18219-18238 | Msa1457180:intergenic | 30.0% |
!!! | TTCGTTTTTTACTGTTGAGT+CGG | + | tig0038511:18290-18309 | Msa1457180:intron | 30.0% |
TGAGAACTTCTACTTATGTA+TGG | + | tig0038511:18458-18477 | Msa1457180:intron | 30.0% | |
! | TTTTAAATACCAATCCATGG+TGG | + | tig0038511:18515-18534 | Msa1457180:intron | 30.0% |
TCAAGTGACACTATAATTTG+TGG | + | tig0038511:18578-18597 | Msa1457180:intron | 30.0% | |
AAACATGCCAATTACCTATA+AGG | + | tig0038511:18683-18702 | Msa1457180:CDS | 30.0% | |
GCTTATACCTTATAGGTAAT+TGG | - | tig0038511:18693-18712 | Msa1457180:intergenic | 30.0% | |
ACATGAGAATATTATGAACC+AGG | + | tig0038511:19147-19166 | Msa1457180:intron | 30.0% | |
! | TGATGAATATTTCTGAACAG+TGG | - | tig0038511:19204-19223 | Msa1457180:intergenic | 30.0% |
TTCATACCTCAAATCTTGAA+GGG | - | tig0038511:19263-19282 | Msa1457180:intergenic | 30.0% | |
ATTCATACCTCAAATCTTGA+AGG | - | tig0038511:19264-19283 | Msa1457180:intergenic | 30.0% | |
!! | CCAAATGATGGATCATAATA+AGG | - | tig0038511:19453-19472 | Msa1457180:intergenic | 30.0% |
CCTTATTATGATCCATCATT+TGG | + | tig0038511:19450-19469 | Msa1457180:CDS | 30.0% | |
AACAAAAGGAGATCAATGAA+TGG | + | tig0038511:19583-19602 | Msa1457180:intron | 30.0% | |
! | TTTCTTTTTCTTCCTTAGAG+TGG | + | tig0038511:19739-19758 | Msa1457180:intron | 30.0% |
!! | TTTGCTTTTGGTATATAGGT+TGG | + | tig0038511:19989-20008 | Msa1457180:intron | 30.0% |
CATGCTAGAAAAAGATTCAT+TGG | + | tig0038511:20103-20122 | Msa1457180:CDS | 30.0% | |
TGCTAGAAAAAGATTCATTG+GGG | + | tig0038511:20105-20124 | Msa1457180:CDS | 30.0% | |
TAATTTATGGCTATGGAAAG+TGG | - | tig0038511:20165-20184 | Msa1457180:intergenic | 30.0% | |
! | CACCAAAATGGATTCAACTT+TGG | + | tig0038511:16277-16296 | Msa1457180:exon | 35.0% |
! | AGCCAAAGTTGAATCCATTT+TGG | - | tig0038511:16282-16301 | Msa1457180:intergenic | 35.0% |
!! | TGTTTTGTTCTAGGTCGTTT+TGG | - | tig0038511:16353-16372 | Msa1457180:intergenic | 35.0% |
!!! | GCACTTGTTTGTTTTGTTCT+AGG | - | tig0038511:16362-16381 | Msa1457180:intergenic | 35.0% |
GAAGAAAAGATTTGGGTCTT+GGG | - | tig0038511:16444-16463 | Msa1457180:intergenic | 35.0% | |
AGAAGAAAAGATTTGGGTCT+TGG | - | tig0038511:16445-16464 | Msa1457180:intergenic | 35.0% | |
!!! | GCATAGCAACCTTTTTTGTT+TGG | - | tig0038511:16471-16490 | Msa1457180:intergenic | 35.0% |
AAATGATGAGAGAAACATGG+AGG | - | tig0038511:16515-16534 | Msa1457180:intergenic | 35.0% | |
TAAATTTAATGACTCTGCGG+TGG | - | tig0038511:16570-16589 | Msa1457180:intergenic | 35.0% | |
GCAGAGTTATTAGATGAGTA+TGG | - | tig0038511:16764-16783 | Msa1457180:intergenic | 35.0% | |
! | TGCATGAATTGGTTTAGTCA+CGG | - | tig0038511:16786-16805 | Msa1457180:intergenic | 35.0% |
CTAAAGTAGTCTTTATGGTG+TGG | + | tig0038511:16824-16843 | Msa1457180:intron | 35.0% | |
AATCATTGGTCCAATCATTG+TGG | - | tig0038511:17462-17481 | Msa1457180:intergenic | 35.0% | |
TGTGATGTGTGGAACAATAA+AGG | + | tig0038511:17574-17593 | Msa1457180:intron | 35.0% | |
GTGATGTGTGGAACAATAAA+GGG | + | tig0038511:17575-17594 | Msa1457180:intron | 35.0% | |
TCATTTCCAACTCAAATTCC+TGG | + | tig0038511:17740-17759 | Msa1457180:CDS | 35.0% | |
!!! | GCTTTTTTGTATTGTGTACC+AGG | - | tig0038511:17761-17780 | Msa1457180:intergenic | 35.0% |
GGAAATAATTAGTGAGAGGA+AGG | + | tig0038511:17898-17917 | Msa1457180:CDS | 35.0% | |
!! | AGCTGTTTCTTGAATTGGAA+AGG | + | tig0038511:17956-17975 | Msa1457180:CDS | 35.0% |
TTCTTGAATTGGAAAGGAGA+AGG | + | tig0038511:17962-17981 | Msa1457180:CDS | 35.0% | |
GAAACTTCTCGAATGTGTAA+AGG | + | tig0038511:18102-18121 | Msa1457180:CDS | 35.0% | |
CTCAACAGTAAAAAACGAAG+AGG | - | tig0038511:18289-18308 | Msa1457180:intergenic | 35.0% | |
TGTTGAGTCGGTAATCTAAT+TGG | + | tig0038511:18302-18321 | Msa1457180:intron | 35.0% | |
! | CGAATATGTGTTGAGTTTTG+AGG | + | tig0038511:18355-18374 | Msa1457180:intron | 35.0% |
! | TTTTATCATATGGTCCACCA+TGG | - | tig0038511:18532-18551 | Msa1457180:intergenic | 35.0% |
GCAATTCACAAGGAAAATGA+TGG | + | tig0038511:18630-18649 | Msa1457180:CDS | 35.0% | |
ATGGTAAACTACAGCTGAAT+TGG | + | tig0038511:18649-18668 | Msa1457180:CDS | 35.0% | |
!!! | TGGAATTTTTCAGGTTGTGT+TGG | + | tig0038511:18869-18888 | Msa1457180:intron | 35.0% |
ATAGCTGTGACATTACATAG+TGG | - | tig0038511:19032-19051 | Msa1457180:intergenic | 35.0% | |
CTTGAAGGGTTGAATTTATG+AGG | - | tig0038511:19249-19268 | Msa1457180:intergenic | 35.0% | |
ATTCAACCCTTCAAGATTTG+AGG | + | tig0038511:19254-19273 | Msa1457180:CDS | 35.0% | |
!!! | GGCATGAAAGTATTTGGTTT+TGG | - | tig0038511:19376-19395 | Msa1457180:intergenic | 35.0% |
!! | CCAAATGGCATGAAAGTATT+TGG | - | tig0038511:19382-19401 | Msa1457180:intergenic | 35.0% |
CCAAATACTTTCATGCCATT+TGG | + | tig0038511:19379-19398 | Msa1457180:CDS | 35.0% | |
TAAACTTGACGACCAAATGA+TGG | - | tig0038511:19465-19484 | Msa1457180:intergenic | 35.0% | |
ATCATTTGGTCGTCAAGTTT+AGG | + | tig0038511:19464-19483 | Msa1457180:CDS | 35.0% | |
GTATATAGTTGTCCACTCTA+AGG | - | tig0038511:19754-19773 | Msa1457180:intergenic | 35.0% | |
! | TTTGGTATATAGGTTGGAAG+TGG | + | tig0038511:19995-20014 | Msa1457180:intron | 35.0% |
CATTCAAAGGCAATGGAAAT+GGG | - | tig0038511:20049-20068 | Msa1457180:intergenic | 35.0% | |
!! | TGAATCTTTTTCTAGCATGC+TGG | - | tig0038511:20102-20121 | Msa1457180:intergenic | 35.0% |
! | ATGGGATTTTGTAGGATAGA+GGG | - | tig0038511:20262-20281 | Msa1457180:intergenic | 35.0% |
AGGCGTCCTTAAAAAAAGAT+TGG | + | tig0038511:20284-20303 | Msa1457180:three_prime_UTR | 35.0% | |
TAAATAGAGTCAAGGGGATT+TGG | + | tig0038511:20373-20392 | Msa1457180:three_prime_UTR | 35.0% | |
AAAACTTCCTCCTGGTTCAA+TGG | + | tig0038511:16382-16401 | Msa1457180:CDS | 40.0% | |
AAACTTCCTCCTGGTTCAAT+GGG | + | tig0038511:16383-16402 | Msa1457180:CDS | 40.0% | |
TGAAGGGTTTGTCCTATGTA+AGG | - | tig0038511:16413-16432 | Msa1457180:intergenic | 40.0% | |
GGTCGATTGTAGATGATATG+AGG | + | tig0038511:16845-16864 | Msa1457180:intron | 40.0% | |
TGGATGTAAGTGTGTGATGT+TGG | + | tig0038511:17007-17026 | Msa1457180:CDS | 40.0% | |
TGGTGGAAAAACAAAGCACA+AGG | - | tig0038511:17122-17141 | Msa1457180:intergenic | 40.0% | |
!!! | TGTGCTTTGTTTTTCCACCA+AGG | + | tig0038511:17122-17141 | Msa1457180:CDS | 40.0% |
TAAGCTTCCTCAAACGCAAA+TGG | - | tig0038511:17154-17173 | Msa1457180:intergenic | 40.0% | |
GTTTGAGGAAGCTTATTCAG+AGG | + | tig0038511:17159-17178 | Msa1457180:CDS | 40.0% | |
!! | CCAAGATTTGATGGTGGAAA+GGG | - | tig0038511:17237-17256 | Msa1457180:intergenic | 40.0% |
CCTTTCCACCATCAAATCTT+GGG | + | tig0038511:17235-17254 | Msa1457180:CDS | 40.0% | |
CTTTCCACCATCAAATCTTG+GGG | + | tig0038511:17236-17255 | Msa1457180:CDS | 40.0% | |
ATCATCACCCCAAGATTTGA+TGG | - | tig0038511:17246-17265 | Msa1457180:intergenic | 40.0% | |
ATCAAATCTTGGGGTGATGA+TGG | + | tig0038511:17245-17264 | Msa1457180:CDS | 40.0% | |
GTTATGTGGAATGTGATGTG+TGG | + | tig0038511:17563-17582 | Msa1457180:intron | 40.0% | |
!! | TTTTTGGCAATCTAGAGCCA+AGG | + | tig0038511:17666-17685 | Msa1457180:CDS | 40.0% |
TGTGTACCAGGAATTTGAGT+TGG | - | tig0038511:17749-17768 | Msa1457180:intergenic | 40.0% | |
TTGAATTGGAAAGGAGAAGG+AGG | + | tig0038511:17965-17984 | Msa1457180:CDS | 40.0% | |
!!! | ATTTTTGGTGGTTTCTACGG+TGG | + | tig0038511:18165-18184 | Msa1457180:intron | 40.0% |
!! | GACACTGACTTCATTGATGT+CGG | - | tig0038511:18415-18434 | Msa1457180:intergenic | 40.0% |
CTCAATTCTCTTCGTCTTCA+TGG | - | tig0038511:18442-18461 | Msa1457180:intergenic | 40.0% | |
! | TGTGGTAATGCTTGCTTTGT+AGG | + | tig0038511:18596-18615 | Msa1457180:intron | 40.0% |
TCAGCTACTGCTTCTCTAAA+TGG | - | tig0038511:18927-18946 | Msa1457180:intergenic | 40.0% | |
GTAGCTGATGTAGAGTACAA+AGG | + | tig0038511:18939-18958 | Msa1457180:CDS | 40.0% | |
CAGGATTCCTAATCCCAAAA+GGG | + | tig0038511:19166-19185 | Msa1457180:intron | 40.0% | |
!! | TGAGGCTCTGGAAAAAATTC+AGG | - | tig0038511:19231-19250 | Msa1457180:intergenic | 40.0% |
! | ACTTTCATGCCATTTGGTAG+TGG | + | tig0038511:19385-19404 | Msa1457180:CDS | 40.0% |
! | GTATATAGGTTGGAAGTGGT+AGG | + | tig0038511:19999-20018 | Msa1457180:intron | 40.0% |
TCACACTGTGGGATTCAATA+TGG | + | tig0038511:20023-20042 | Msa1457180:CDS | 40.0% | |
CCATTCAAAGGCAATGGAAA+TGG | - | tig0038511:20050-20069 | Msa1457180:intergenic | 40.0% | |
CCATTTCCATTGCCTTTGAA+TGG | + | tig0038511:20047-20066 | Msa1457180:CDS | 40.0% | |
! | TGGGATTTTGTAGGATAGAG+GGG | - | tig0038511:20261-20280 | Msa1457180:intergenic | 40.0% |
! | CATGGGATTTTGTAGGATAG+AGG | - | tig0038511:20263-20282 | Msa1457180:intergenic | 40.0% |
TATCCTACAAAATCCCATGC+AGG | + | tig0038511:20264-20283 | Msa1457180:three_prime_UTR | 40.0% | |
!!! | TTTTTTAAGGACGCCTGCAT+GGG | - | tig0038511:20280-20299 | Msa1457180:intergenic | 40.0% |
!!! | TTTTTTTAAGGACGCCTGCA+TGG | - | tig0038511:20281-20300 | Msa1457180:intergenic | 40.0% |
AAGATTGGAAAAGCCTCAAC+AGG | + | tig0038511:20299-20318 | Msa1457180:three_prime_UTR | 40.0% | |
AGATTGGAAAAGCCTCAACA+GGG | + | tig0038511:20300-20319 | Msa1457180:three_prime_UTR | 40.0% | |
ACAAGTGCAAAACTTCCTCC+TGG | + | tig0038511:16374-16393 | Msa1457180:CDS | 45.0% | |
AACTTCCTCCTGGTTCAATG+GGG | + | tig0038511:16384-16403 | Msa1457180:CDS | 45.0% | |
GTCTTGGGAGTAGAGTTGAA+GGG | - | tig0038511:16429-16448 | Msa1457180:intergenic | 45.0% | |
TGATGAGAGAAACATGGAGG+TGG | - | tig0038511:16512-16531 | Msa1457180:intergenic | 45.0% | |
AACACAAAACGTGCAGCTTC+AGG | - | tig0038511:17038-17057 | Msa1457180:intergenic | 45.0% | |
! | TGAAGCTGCACGTTTTGTGT+TGG | + | tig0038511:17037-17056 | Msa1457180:CDS | 45.0% |
AACGCAAATGGTACTCACCT+TGG | - | tig0038511:17142-17161 | Msa1457180:intergenic | 45.0% | |
GTGAGTACCATTTGCGTTTG+AGG | + | tig0038511:17144-17163 | Msa1457180:CDS | 45.0% | |
CAAGTTGCGAAGTGAATCGA+GGG | - | tig0038511:17192-17211 | Msa1457180:intergenic | 45.0% | |
AGGGCTAAGGCTTCAATTTC+AGG | - | tig0038511:17218-17237 | Msa1457180:intergenic | 45.0% | |
!! | TTTGATGGTGGAAAGGGCTA+AGG | - | tig0038511:17231-17250 | Msa1457180:intergenic | 45.0% |
CCCTTTCCACCATCAAATCT+TGG | + | tig0038511:17234-17253 | Msa1457180:CDS | 45.0% | |
!! | CCCAAGATTTGATGGTGGAA+AGG | - | tig0038511:17238-17257 | Msa1457180:intergenic | 45.0% |
ATCACCCCAAGATTTGATGG+TGG | - | tig0038511:17243-17262 | Msa1457180:intergenic | 45.0% | |
AATTGCGGCTGTAGTCACAT+TGG | + | tig0038511:17368-17387 | Msa1457180:intron | 45.0% | |
! | CAATCTAGAGCCAAGGTTGA+GGG | + | tig0038511:17673-17692 | Msa1457180:CDS | 45.0% |
!! | TTTAGCTCTTCCCTCAACCT+TGG | - | tig0038511:17686-17705 | Msa1457180:intergenic | 45.0% |
GTGAAGGCAAGAGAGAAACT+TGG | + | tig0038511:17863-17882 | Msa1457180:intron | 45.0% | |
CACAGCTACTGTCATGACAT+GGG | + | tig0038511:18054-18073 | Msa1457180:CDS | 45.0% | |
!! | CTACGGTGGATTGCTTTGAT+AGG | + | tig0038511:18179-18198 | Msa1457180:intron | 45.0% |
TCATATGGTCCACCATGGAT+TGG | - | tig0038511:18527-18546 | Msa1457180:intergenic | 45.0% | |
TGAGCAGAAGGCAATTCACA+AGG | + | tig0038511:18620-18639 | Msa1457180:CDS | 45.0% | |
TTAGTCTCGGCATTTATGCG+CGG | + | tig0038511:18766-18785 | Msa1457180:intron | 45.0% | |
! | TGTGTTGGAGAGCATGAGAA+TGG | + | tig0038511:18884-18903 | Msa1457180:CDS | 45.0% |
!!! | CCTTTTGGGATTAGGAATCC+TGG | - | tig0038511:19168-19187 | Msa1457180:intergenic | 45.0% |
CCAGGATTCCTAATCCCAAA+AGG | + | tig0038511:19165-19184 | Msa1457180:intron | 45.0% | |
GATTCCTAATCCCAAAAGGG+TGG | + | tig0038511:19169-19188 | Msa1457180:CDS | 45.0% | |
!!! | CTTTCCACCCTTTTGGGATT+AGG | - | tig0038511:19176-19195 | Msa1457180:intergenic | 45.0% |
! | GCATTGCTTTCCACCCTTTT+GGG | - | tig0038511:19182-19201 | Msa1457180:intergenic | 45.0% |
GGGTTGAATTTATGAGGCTC+TGG | - | tig0038511:19243-19262 | Msa1457180:intergenic | 45.0% | |
GCATGTACTCCACTACCAAA+TGG | - | tig0038511:19397-19416 | Msa1457180:intergenic | 45.0% | |
AAGTGGTAGGATCACACTGT+GGG | + | tig0038511:20012-20031 | Msa1457180:CDS | 45.0% | |
! | GGGATTTTGTAGGATAGAGG+GGG | - | tig0038511:20260-20279 | Msa1457180:intergenic | 45.0% |
GATTGGAAAAGCCTCAACAG+GGG | + | tig0038511:20301-20320 | Msa1457180:three_prime_UTR | 45.0% | |
GAAAGATACATCCCCTGTTG+AGG | - | tig0038511:20315-20334 | Msa1457180:intergenic | 45.0% | |
!! | AATTTACTTATATTAAAAAA+CGG | - | tig0038511:16601-16620 | Msa1457180:intergenic | 5.0% |
!!! | GTTATTAATATATTAATTTT+AGG | + | tig0038511:16955-16974 | Msa1457180:intron | 5.0% |
! | TCAATGGGGTGGCCTTACAT+AGG | + | tig0038511:16398-16417 | Msa1457180:CDS | 50.0% |
GGTCTTGGGAGTAGAGTTGA+AGG | - | tig0038511:16430-16449 | Msa1457180:intergenic | 50.0% | |
GAGGTGGAGTGGAACTAGAT+AGG | - | tig0038511:16496-16515 | Msa1457180:intergenic | 50.0% | |
AGAGAAACATGGAGGTGGAG+TGG | - | tig0038511:16507-16526 | Msa1457180:intergenic | 50.0% | |
GCAAATGGTACTCACCTTGG+TGG | - | tig0038511:17139-17158 | Msa1457180:intergenic | 50.0% | |
CCAAGTTGCGAAGTGAATCG+AGG | - | tig0038511:17193-17212 | Msa1457180:intergenic | 50.0% | |
CCTCGATTCACTTCGCAACT+TGG | + | tig0038511:17190-17209 | Msa1457180:CDS | 50.0% | |
! | GCAATCTAGAGCCAAGGTTG+AGG | + | tig0038511:17672-17691 | Msa1457180:CDS | 50.0% |
!! | TGGAGTGCTTTTTGCTGCTC+AGG | + | tig0038511:18027-18046 | Msa1457180:CDS | 50.0% |
CCATGTCATGACAGTAGCTG+TGG | - | tig0038511:18056-18075 | Msa1457180:intergenic | 50.0% | |
CCACAGCTACTGTCATGACA+TGG | + | tig0038511:18053-18072 | Msa1457180:CDS | 50.0% | |
!! | CGGTGGATTGCTTTGATAGG+TGG | + | tig0038511:18182-18201 | Msa1457180:intron | 50.0% |
TGCTTTGTAGGCTGAGCAGA+AGG | + | tig0038511:18608-18627 | Msa1457180:intron | 50.0% | |
! | GGCATTGCTTTCCACCCTTT+TGG | - | tig0038511:19183-19202 | Msa1457180:intergenic | 50.0% |
AGTGGAGTACATGCTTGTCC+TGG | + | tig0038511:19403-19422 | Msa1457180:CDS | 50.0% | |
AGCTTAGCAAGCTCATTGCC+AGG | - | tig0038511:19424-19443 | Msa1457180:intergenic | 50.0% | |
!! | TGGCAATGAGCTTGCTAAGC+TGG | + | tig0038511:19423-19442 | Msa1457180:CDS | 50.0% |
GAAGTGGTAGGATCACACTG+TGG | + | tig0038511:20011-20030 | Msa1457180:CDS | 50.0% | |
GGGAGTCCATTCAAAGGCAA+TGG | - | tig0038511:20056-20075 | Msa1457180:intergenic | 50.0% | |
ATTCTCTCCAACACCTGGCT+GGG | - | tig0038511:20076-20095 | Msa1457180:intergenic | 50.0% | |
GGTAGATTCTCTCCAACACC+TGG | - | tig0038511:20081-20100 | Msa1457180:intergenic | 50.0% | |
! | ACGCCTGCATGGGATTTTGT+AGG | - | tig0038511:20270-20289 | Msa1457180:intergenic | 50.0% |
TTCCTCCTGGTTCAATGGGG+TGG | + | tig0038511:16387-16406 | Msa1457180:CDS | 55.0% | |
TAAGGCCACCCCATTGAACC+AGG | - | tig0038511:16395-16414 | Msa1457180:intergenic | 55.0% | |
CTGGCTGGGAGTCCATTCAA+AGG | - | tig0038511:20062-20081 | Msa1457180:intergenic | 55.0% | |
! | CTTTGAATGGACTCCCAGCC+AGG | + | tig0038511:20060-20079 | Msa1457180:CDS | 55.0% |
GATTCTCTCCAACACCTGGC+TGG | - | tig0038511:20077-20096 | Msa1457180:intergenic | 55.0% | |
GTCTCGGCATTTATGCGCGG+AGG | + | tig0038511:18769-18788 | Msa1457180:intron | 60.0% | |
ATGGACTCCCAGCCAGGTGT+TGG | + | tig0038511:20066-20085 | Msa1457180:CDS | 60.0% | |
GGCCACCCCATTGAACCAGG+AGG | - | tig0038511:16392-16411 | Msa1457180:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0038511 | gene | 16193 | 20396 | 16193 | ID=Msa1457180;Name=Msa1457180 |
tig0038511 | mRNA | 16193 | 20396 | 16193 | ID=Msa1457180-mRNA-1;Parent=Msa1457180;Name=Msa1457180-mRNA-1;_AED=0.15;_eAED=0.15;_QI=91|1|1|1|1|1|9|260|482 |
tig0038511 | exon | 16193 | 16480 | 16193 | ID=Msa1457180-mRNA-1:exon:21028;Parent=Msa1457180-mRNA-1 |
tig0038511 | exon | 16977 | 17301 | 16977 | ID=Msa1457180-mRNA-1:exon:21029;Parent=Msa1457180-mRNA-1 |
tig0038511 | exon | 17638 | 17787 | 17638 | ID=Msa1457180-mRNA-1:exon:21030;Parent=Msa1457180-mRNA-1 |
tig0038511 | exon | 17869 | 18123 | 17869 | ID=Msa1457180-mRNA-1:exon:21031;Parent=Msa1457180-mRNA-1 |
tig0038511 | exon | 18618 | 18704 | 18618 | ID=Msa1457180-mRNA-1:exon:21032;Parent=Msa1457180-mRNA-1 |
tig0038511 | exon | 18882 | 18960 | 18882 | ID=Msa1457180-mRNA-1:exon:21033;Parent=Msa1457180-mRNA-1 |
tig0038511 | exon | 19169 | 19275 | 19169 | ID=Msa1457180-mRNA-1:exon:21034;Parent=Msa1457180-mRNA-1 |
tig0038511 | exon | 19367 | 19485 | 19367 | ID=Msa1457180-mRNA-1:exon:21035;Parent=Msa1457180-mRNA-1 |
tig0038511 | exon | 20007 | 20396 | 20007 | ID=Msa1457180-mRNA-1:exon:21036;Parent=Msa1457180-mRNA-1 |
tig0038511 | five_prime_UTR | 16193 | 16283 | 16193 | ID=Msa1457180-mRNA-1:five_prime_utr;Parent=Msa1457180-mRNA-1 |
tig0038511 | CDS | 16284 | 16480 | 16284 | ID=Msa1457180-mRNA-1:cds;Parent=Msa1457180-mRNA-1 |
tig0038511 | CDS | 16977 | 17301 | 16977 | ID=Msa1457180-mRNA-1:cds;Parent=Msa1457180-mRNA-1 |
tig0038511 | CDS | 17638 | 17787 | 17638 | ID=Msa1457180-mRNA-1:cds;Parent=Msa1457180-mRNA-1 |
tig0038511 | CDS | 17869 | 18123 | 17869 | ID=Msa1457180-mRNA-1:cds;Parent=Msa1457180-mRNA-1 |
tig0038511 | CDS | 18618 | 18704 | 18618 | ID=Msa1457180-mRNA-1:cds;Parent=Msa1457180-mRNA-1 |
tig0038511 | CDS | 18882 | 18960 | 18882 | ID=Msa1457180-mRNA-1:cds;Parent=Msa1457180-mRNA-1 |
tig0038511 | CDS | 19169 | 19275 | 19169 | ID=Msa1457180-mRNA-1:cds;Parent=Msa1457180-mRNA-1 |
tig0038511 | CDS | 19367 | 19485 | 19367 | ID=Msa1457180-mRNA-1:cds;Parent=Msa1457180-mRNA-1 |
tig0038511 | CDS | 20007 | 20136 | 20007 | ID=Msa1457180-mRNA-1:cds;Parent=Msa1457180-mRNA-1 |
tig0038511 | three_prime_UTR | 20137 | 20396 | 20137 | ID=Msa1457180-mRNA-1:three_prime_utr;Parent=Msa1457180-mRNA-1 |
Gene Sequence |
Protein sequence |