Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0819490 | XP_004491085.1 | 77.306 | 824 | 115 | 8 | 1 | 824 | 1 | 752 | 0.0 | 1202 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0819490 | sp|O48626|ZW10_ARATH | 63.093 | 569 | 187 | 4 | 256 | 819 | 187 | 737 | 0.0 | 725 |
Msa0819490 | sp|O48626|ZW10_ARATH | 58.152 | 184 | 77 | 0 | 1 | 184 | 4 | 187 | 9.63e-63 | 228 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0819490 | A0A1S2XLD5 | 77.306 | 824 | 115 | 8 | 1 | 824 | 1 | 752 | 0.0 | 1202 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0024400 | Msa0819490 | 0.835323 | 1.793602e-56 | -8.615850e-47 |
Msa0072720 | Msa0819490 | 0.807231 | 5.591193e-50 | -8.615850e-47 |
Msa0089980 | Msa0819490 | 0.828978 | 6.654398e-55 | -8.615850e-47 |
Msa0090010 | Msa0819490 | 0.823242 | 1.539526e-53 | -8.615850e-47 |
Msa0120280 | Msa0819490 | 0.800565 | 1.357835e-48 | -8.615850e-47 |
Msa0607320 | Msa0819490 | 0.841642 | 4.198043e-58 | -8.615850e-47 |
Msa0651560 | Msa0819490 | 0.824150 | 9.435164e-54 | -8.615850e-47 |
Msa0690310 | Msa0819490 | 0.820720 | 5.908647e-53 | -8.615850e-47 |
Msa0743930 | Msa0819490 | 0.807962 | 3.912612e-50 | -8.615850e-47 |
Msa0756380 | Msa0819490 | 0.821022 | 5.034441e-53 | -8.615850e-47 |
Msa0783130 | Msa0819490 | 0.812676 | 3.760910e-51 | -8.615850e-47 |
Msa0818060 | Msa0819490 | 0.806017 | 1.008934e-49 | -8.615850e-47 |
Msa0819490 | Msa0833530 | 0.822546 | 2.235432e-53 | -8.615850e-47 |
Msa0819490 | Msa0847150 | 0.809697 | 1.664414e-50 | -8.615850e-47 |
Msa0819490 | Msa0855870 | 0.802454 | 5.567193e-49 | -8.615850e-47 |
Msa0819490 | Msa0992510 | 0.801783 | 7.650753e-49 | -8.615850e-47 |
Msa0819490 | Msa1002960 | 0.803887 | 2.812305e-49 | -8.615850e-47 |
Msa0819490 | Msa1034500 | 0.806229 | 9.104881e-50 | -8.615850e-47 |
Msa0819490 | Msa1047760 | 0.829209 | 5.851125e-55 | -8.615850e-47 |
Msa0819490 | Msa1111380 | 0.810255 | 1.262210e-50 | -8.615850e-47 |
Msa0819490 | Msa1124950 | 0.804056 | 2.594056e-49 | -8.615850e-47 |
Msa0819490 | Msa1211230 | -0.804350 | 2.253695e-49 | -8.615850e-47 |
Msa0819490 | Msa1211340 | 0.820906 | 5.353311e-53 | -8.615850e-47 |
Msa0819490 | Msa1213890 | 0.817832 | 2.686966e-52 | -8.615850e-47 |
Msa0819490 | Msa1259640 | 0.819768 | 9.765082e-53 | -8.615850e-47 |
Msa0819490 | Msa1271130 | 0.828233 | 1.007567e-54 | -8.615850e-47 |
Msa0819490 | Msa1283740 | 0.805691 | 1.181313e-49 | -8.615850e-47 |
Msa0819490 | Msa1329790 | 0.822015 | 2.969705e-53 | -8.615850e-47 |
Msa0819490 | Msa1371520 | 0.805959 | 1.037520e-49 | -8.615850e-47 |
Msa0819490 | Msa1403710 | 0.828679 | 7.864021e-55 | -8.615850e-47 |
Msa0819490 | Msa1414820 | 0.809510 | 1.826320e-50 | -8.615850e-47 |
Msa0819490 | Msa1419690 | 0.805255 | 1.457954e-49 | -8.615850e-47 |
Msa0819490 | Msa1434740 | 0.806969 | 6.353493e-50 | -8.615850e-47 |
Msa0819490 | Msa1452710 | 0.821468 | 3.973239e-53 | -8.615850e-47 |
Msa0138360 | Msa0819490 | 0.810889 | 9.209764e-51 | -8.615850e-47 |
Msa0163510 | Msa0819490 | 0.822962 | 1.789016e-53 | -8.615850e-47 |
Msa0204770 | Msa0819490 | 0.804477 | 2.120237e-49 | -8.615850e-47 |
Msa0214550 | Msa0819490 | 0.807187 | 5.712000e-50 | -8.615850e-47 |
Msa0237420 | Msa0819490 | 0.808180 | 3.515824e-50 | -8.615850e-47 |
Msa0382370 | Msa0819490 | 0.811612 | 6.418182e-51 | -8.615850e-47 |
Msa0395980 | Msa0819490 | 0.834525 | 2.850170e-56 | -8.615850e-47 |
Msa0410840 | Msa0819490 | 0.806853 | 6.721449e-50 | -8.615850e-47 |
Msa0432160 | Msa0819490 | 0.829534 | 4.878995e-55 | -8.615850e-47 |
Msa0440510 | Msa0819490 | 0.834175 | 3.489247e-56 | -8.615850e-47 |
Msa0450400 | Msa0819490 | -0.810583 | 1.072609e-50 | -8.615850e-47 |
Msa0468250 | Msa0819490 | 0.855460 | 6.217581e-62 | -8.615850e-47 |
Msa0476680 | Msa0819490 | 0.828196 | 1.028199e-54 | -8.615850e-47 |
Msa0264840 | Msa0819490 | 0.823139 | 1.626295e-53 | -8.615850e-47 |
Msa0277960 | Msa0819490 | 0.803580 | 3.257297e-49 | -8.615850e-47 |
Msa0328390 | Msa0819490 | 0.827349 | 1.643589e-54 | -8.615850e-47 |
Msa0358400 | Msa0819490 | 0.852975 | 3.243818e-61 | -8.615850e-47 |
Msa0362890 | Msa0819490 | 0.833754 | 4.446522e-56 | -8.615850e-47 |
Msa0491000 | Msa0819490 | 0.829968 | 3.824295e-55 | -8.615850e-47 |
Msa0521010 | Msa0819490 | 0.827587 | 1.441105e-54 | -8.615850e-47 |
Msa0527190 | Msa0819490 | 0.821485 | 3.938799e-53 | -8.615850e-47 |
Msa0553200 | Msa0819490 | 0.810205 | 1.294181e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0819490 | MtrunA17_Chr5g0438671 | 93.453 | 611 | 35 | 2 | 219 | 824 | 142 | 752 | 0.0 | 1146 |
Msa0819490 | MtrunA17_Chr5g0438671 | 97.826 | 184 | 4 | 0 | 1 | 184 | 1 | 184 | 5.90e-106 | 343 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0819490 | AT2G32900.1 | 63.093 | 569 | 187 | 4 | 256 | 819 | 187 | 737 | 0.0 | 725 |
Msa0819490 | AT2G32900.1 | 58.152 | 184 | 77 | 0 | 1 | 184 | 4 | 187 | 9.79e-64 | 228 |
Find 231 sgRNAs with CRISPR-Local
Find 684 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGATATCTGTGGCGGCTTT+TGG | 0.171217 | 5_3:+55963596 | Msa0819490:CDS |
ATGCTCTTCTTGTAAGTTAA+AGG | 0.172958 | 5_3:-55969532 | None:intergenic |
TTTCCGCTACCTCAAATATT+TGG | 0.180434 | 5_3:-55970471 | None:intergenic |
AGAGGTCCTCGTGAAGTTTA+TGG | 0.195404 | 5_3:+55964256 | Msa0819490:CDS |
ATTCTATTCTTAGATTTATT+AGG | 0.197843 | 5_3:-55963521 | None:intergenic |
CTACTAATGGCAAGCATATT+AGG | 0.208693 | 5_3:+55970683 | Msa0819490:three_prime_UTR |
GCATGCTGTGTTTGCTGATT+TGG | 0.219290 | 5_3:+55968987 | Msa0819490:CDS |
GATGGGGAGCTTCTGTATTC+AGG | 0.225636 | 5_3:+55965083 | Msa0819490:CDS |
GCAGGGAACTCACTCAAATT+TGG | 0.242142 | 5_3:-55969798 | None:intergenic |
CATCAATTGCTTGGCTGCTT+TGG | 0.242515 | 5_3:-55966035 | None:intergenic |
TGAAGGTTGCGTTGAGAATT+GGG | 0.268063 | 5_3:+55962583 | Msa0819490:CDS |
AACATTTGTAGCTCAAATTT+CGG | 0.273455 | 5_3:+55970765 | Msa0819490:three_prime_UTR |
GGGTTGGTGGGAGTGATTGT+AGG | 0.275689 | 5_3:+55962480 | Msa0819490:CDS |
ATACAAGGGATGGTTCTATT+TGG | 0.289580 | 5_3:+55965936 | Msa0819490:CDS |
GTGGTTGGTATTCTAGAGTA+TGG | 0.291945 | 5_3:+55964492 | Msa0819490:CDS |
CGTAAAATCCGCAAACTATC+AGG | 0.292468 | 5_3:+55969852 | Msa0819490:CDS |
CTCGCCGTATCGGCTGATAT+TGG | 0.294472 | 5_3:-55963633 | None:intergenic |
TTTGCTTCCAGAACAGTTCT+TGG | 0.298919 | 5_3:+55965141 | Msa0819490:CDS |
AGTTCTTGGATCCGATGTTT+TGG | 0.310346 | 5_3:+55965155 | Msa0819490:CDS |
TACAGGATCTTGGGAGAATA+AGG | 0.315580 | 5_3:+55970005 | Msa0819490:CDS |
TAAAATCCATTACAGGATCT+TGG | 0.317258 | 5_3:+55969995 | Msa0819490:CDS |
GCAAACATGGGGATGGGATT+GGG | 0.317373 | 5_3:+55970619 | Msa0819490:three_prime_UTR |
AGTTCCATCACCAGATATTA+AGG | 0.320745 | 5_3:+55964629 | Msa0819490:CDS |
GGCTCCAAGATTCCAGCTTT+TGG | 0.321659 | 5_3:+55969008 | Msa0819490:CDS |
TTGAAGGTTGCGTTGAGAAT+TGG | 0.325300 | 5_3:+55962582 | Msa0819490:CDS |
GGGCGGAGAGAGGGGAGTTT+TGG | 0.325758 | 5_3:-55961684 | None:intergenic |
ATTACATTCACCTTAATATC+TGG | 0.328243 | 5_3:-55964639 | None:intergenic |
GATTCAGTTGCAAATGGTTT+TGG | 0.331904 | 5_3:+55964355 | Msa0819490:CDS |
ACTTTGTGATGCCATCCTAT+TGG | 0.332936 | 5_3:-55963671 | None:intergenic |
ATCATCTTTATTTGAGTCCT+TGG | 0.342033 | 5_3:+55969764 | Msa0819490:CDS |
TCGATGAGAAGGCGGAGATC+GGG | 0.351384 | 5_3:-55961706 | None:intergenic |
TTCTATTCTTAGATTTATTA+GGG | 0.353472 | 5_3:-55963520 | None:intergenic |
TCGCCGTATCGGCTGATATT+GGG | 0.355518 | 5_3:-55963632 | None:intergenic |
GGAAGTTGTGGAGGAGATGA+AGG | 0.360747 | 5_3:+55962419 | Msa0819490:CDS |
ATGCCTTTAAAATCCATTAC+AGG | 0.361134 | 5_3:+55969988 | Msa0819490:CDS |
GGGGAAGAGTGAGGAGTTGA+AGG | 0.369607 | 5_3:+55962440 | Msa0819490:CDS |
CTTTAAGAAAAGATTGTTTA+CGG | 0.378098 | 5_3:+55970312 | Msa0819490:CDS |
CAAAGCAGCCAAGCAATTGA+TGG | 0.388545 | 5_3:+55966036 | Msa0819490:CDS |
TCTGCCAAAAGCTGGAATCT+TGG | 0.390960 | 5_3:-55969012 | None:intergenic |
CAGTTGTGGCTTTACTATAT+CGG | 0.395606 | 5_3:+55970035 | Msa0819490:CDS |
GCATCACAAAGTGGCCAGTA+TGG | 0.397281 | 5_3:+55963682 | Msa0819490:CDS |
AAAATCCATTACAGGATCTT+GGG | 0.398335 | 5_3:+55969996 | Msa0819490:CDS |
CCTTGTTATTTATAACTTGA+AGG | 0.400015 | 5_3:+55969059 | Msa0819490:CDS |
ATGGGGAGCTTCTGTATTCA+GGG | 0.400110 | 5_3:+55965084 | Msa0819490:CDS |
AAGAGAGTTGTTAGGGTTGG+TGG | 0.401297 | 5_3:+55962467 | Msa0819490:CDS |
GCATGCTCCTTCATCGAACT+TGG | 0.402815 | 5_3:-55968970 | None:intergenic |
GATGCCATCCTATTGGATTA+TGG | 0.403214 | 5_3:-55963664 | None:intergenic |
GATCGAGAGCCGTTGGTGTA+TGG | 0.406621 | 5_3:+55962615 | Msa0819490:CDS |
GCTAATTTGTCATCTACTAA+TGG | 0.407966 | 5_3:+55970670 | Msa0819490:three_prime_UTR |
TATCTTTCCCAAGAGATACT+TGG | 0.409340 | 5_3:+55968767 | Msa0819490:CDS |
AACTTTAACGGTCTGTGAAA+CGG | 0.409399 | 5_3:-55961830 | None:intergenic |
GGGAAGATTTCCAATGTGAT+TGG | 0.409769 | 5_3:-55963500 | None:intergenic |
AGGTGAAAAGAGAGTTGTTA+GGG | 0.418650 | 5_3:+55962460 | Msa0819490:CDS |
GTGAAGAAAGAGTTGAAGAG+TGG | 0.419211 | 5_3:+55962525 | Msa0819490:CDS |
TGGAAAAGGTGCATATCATA+TGG | 0.422342 | 5_3:+55969494 | Msa0819490:CDS |
GTTGAAGAGTGGGAAGTTGA+AGG | 0.424476 | 5_3:+55962536 | Msa0819490:CDS |
AAGGTGAAAAGAGAGTTGTT+AGG | 0.424793 | 5_3:+55962459 | Msa0819490:CDS |
AATTAGTTCCATCAATTGCT+TGG | 0.425163 | 5_3:-55966044 | None:intergenic |
AGCAAACATGGGGATGGGAT+TGG | 0.428825 | 5_3:+55970618 | Msa0819490:three_prime_UTR |
CTCAGAGCGACCGGCGGATG+TGG | 0.429447 | 5_3:+55962389 | Msa0819490:CDS |
ATGCGAATCCAAGTATCTCT+TGG | 0.430526 | 5_3:-55968775 | None:intergenic |
TTGCATGGACTAACCTTGAC+AGG | 0.430814 | 5_3:-55968400 | None:intergenic |
GGTTGGTGGGAGTGATTGTA+GGG | 0.435538 | 5_3:+55962481 | Msa0819490:CDS |
GTCGATGAGAAGGCGGAGAT+CGG | 0.437998 | 5_3:-55961707 | None:intergenic |
GGCTAAATTCAGCATTGATC+AGG | 0.438119 | 5_3:+55969247 | Msa0819490:CDS |
ATCGGATCCAAGAACTGTTC+TGG | 0.440121 | 5_3:-55965148 | None:intergenic |
AATATCAAGCTTTCTTTCAA+AGG | 0.441596 | 5_3:+55965211 | Msa0819490:CDS |
TGATCAGGTTGTCTTCAGTC+TGG | 0.443164 | 5_3:+55969474 | Msa0819490:intron |
GCTAGTTCTCCAAATATTTG+AGG | 0.444289 | 5_3:+55970462 | Msa0819490:three_prime_UTR |
TTATGTATCATGTAGGAAGT+TGG | 0.445756 | 5_3:-55970366 | None:intergenic |
AATTTCCACCATAATCCAAT+AGG | 0.449702 | 5_3:+55963656 | Msa0819490:CDS |
GAGGTCATCGGAAACTTTAA+CGG | 0.450863 | 5_3:-55961842 | None:intergenic |
TTATTTGAGTCCTTGGTCAC+TGG | 0.450943 | 5_3:+55969771 | Msa0819490:CDS |
AGGACTCAAATAAAGATGAT+AGG | 0.451013 | 5_3:-55969761 | None:intergenic |
ATTGGACTTGGGATCGGATC+TGG | 0.451508 | 5_3:-55961750 | None:intergenic |
AGCTGCAGAAGAGACTTTAC+AGG | 0.452027 | 5_3:+55969618 | Msa0819490:CDS |
TTTGATTTGTGAAGCTAGAA+AGG | 0.453331 | 5_3:+55968693 | Msa0819490:intron |
GGGATCGGATCTGGTGAGAA+TGG | 0.454958 | 5_3:-55961741 | None:intergenic |
CTCTCTCCACCGTCGCTCCA+TGG | 0.455323 | 5_3:+55961603 | Msa0819490:exon |
TGACAACACTGCTCAATTCA+AGG | 0.456118 | 5_3:-55963559 | None:intergenic |
AAAACATGCCTGATAGTTTG+CGG | 0.456476 | 5_3:-55969860 | None:intergenic |
ATTCAAGGGTTAAACTTAGC+GGG | 0.457551 | 5_3:-55963544 | None:intergenic |
ATATATCTTCTGCCAAAAGC+TGG | 0.459336 | 5_3:-55969020 | None:intergenic |
GAATGGAAAAGTCACATTGC+AGG | 0.463538 | 5_3:-55965824 | None:intergenic |
TTTCTTATCAGAGAGGTGTT+TGG | 0.465676 | 5_3:+55966009 | Msa0819490:CDS |
GAGTGGGATTCAGTTGCAAA+TGG | 0.470807 | 5_3:+55964349 | Msa0819490:CDS |
AGGCGAGGTAGGATTGGACT+TGG | 0.471263 | 5_3:-55961762 | None:intergenic |
TGCGAATCCAAGTATCTCTT+GGG | 0.475542 | 5_3:-55968774 | None:intergenic |
AGAGAGTTGTTAGGGTTGGT+GGG | 0.476208 | 5_3:+55962468 | Msa0819490:CDS |
TTTCAAACAATACCAGCCTT+AGG | 0.476461 | 5_3:-55961873 | None:intergenic |
GTGAAACGGCGTCGTTGCAG+AGG | 0.480159 | 5_3:-55961816 | None:intergenic |
GGTTGCTGCGGAAGGGTTGA+AGG | 0.480378 | 5_3:+55962557 | Msa0819490:CDS |
GATACTTGGATTCGCATTTG+AGG | 0.481340 | 5_3:+55968781 | Msa0819490:CDS |
GGTGGAAATTCTCGCCGTAT+CGG | 0.484540 | 5_3:-55963643 | None:intergenic |
TTGCAGCTTGAGCATTTGGA+TGG | 0.487088 | 5_3:+55965065 | Msa0819490:intron |
GTGAAAACTCACTTGGGGAA+TGG | 0.487942 | 5_3:-55965841 | None:intergenic |
CTACCACATGGCTGGATGAC+AGG | 0.488421 | 5_3:-55965979 | None:intergenic |
ATTATTAGCTCTGATATCCT+AGG | 0.488599 | 5_3:-55965191 | None:intergenic |
GCAGCTTGAGCATTTGGATG+GGG | 0.493265 | 5_3:+55965067 | Msa0819490:intron |
TGAAGAAAGAGTTGAAGAGT+GGG | 0.493345 | 5_3:+55962526 | Msa0819490:CDS |
GTCATCTACAAGAGTTGCTA+TGG | 0.495159 | 5_3:+55968327 | Msa0819490:CDS |
AATCAAATCTACCACATGGC+TGG | 0.496474 | 5_3:-55965987 | None:intergenic |
GAAGTTGTGGAGGAGATGAA+GGG | 0.496632 | 5_3:+55962420 | Msa0819490:CDS |
TGTAGGGTTGAATGAGAGGT+TGG | 0.497020 | 5_3:+55962497 | Msa0819490:CDS |
TGGTTGGTATTCTAGAGTAT+GGG | 0.500904 | 5_3:+55964493 | Msa0819490:CDS |
GCACCGATATACTGCCATAC+TGG | 0.501886 | 5_3:-55963696 | None:intergenic |
AATTTGAGTGAGTTCCCTGC+AGG | 0.502824 | 5_3:+55969801 | Msa0819490:CDS |
TTGGACGTTTGACATGGCCT+AGG | 0.504113 | 5_3:+55965174 | Msa0819490:CDS |
AGAGAGTGATCGAGGGGTGG+TGG | 0.504520 | 5_3:-55961586 | None:intergenic |
ATCGAGAGCCGTTGGTGTAT+GGG | 0.506012 | 5_3:+55962616 | Msa0819490:CDS |
TCTCCAAATATTTGAGGTAG+CGG | 0.506381 | 5_3:+55970468 | Msa0819490:three_prime_UTR |
ATTCTCCCAAGATCCTGTAA+TGG | 0.510661 | 5_3:-55970001 | None:intergenic |
GGTGAGAGGCGAGGTAGGAT+TGG | 0.511685 | 5_3:-55961768 | None:intergenic |
GGTTGTCTTCAGTCTGGAAA+AGG | 0.512113 | 5_3:+55969480 | Msa0819490:intron |
CAAACATGGGGATGGGATTG+GGG | 0.515682 | 5_3:+55970620 | Msa0819490:three_prime_UTR |
GGATCGGATCTGGTGAGAAT+GGG | 0.517907 | 5_3:-55961740 | None:intergenic |
AAGACTAATCCATTTAATGC+TGG | 0.519225 | 5_3:+55969734 | Msa0819490:CDS |
TGTGGAGGTGAGGGAAGTTG+TGG | 0.519227 | 5_3:+55962407 | Msa0819490:CDS |
AAGTTGAAGGTTGCTGCGGA+AGG | 0.521428 | 5_3:+55962549 | Msa0819490:CDS |
GACCGGCGGATGTGGAGGTG+AGG | 0.522535 | 5_3:+55962397 | Msa0819490:CDS |
GGAGATGAAGGGGAAGAGTG+AGG | 0.522560 | 5_3:+55962431 | Msa0819490:CDS |
TAAGTTAAAGGAAGCAAAAG+TGG | 0.523217 | 5_3:-55969520 | None:intergenic |
CTGCAGGAGTATACAAGGGA+TGG | 0.523760 | 5_3:+55965926 | Msa0819490:intron |
GGAAGGGTTGAAGGAGTTGA+AGG | 0.530518 | 5_3:+55962566 | Msa0819490:CDS |
GAAAAGAGAGTTGTTAGGGT+TGG | 0.531605 | 5_3:+55962464 | Msa0819490:CDS |
CTGTTATCCTTGTCATCTGA+TGG | 0.531605 | 5_3:-55965717 | None:intergenic |
GAAGGTTGCGTTGAGAATTG+GGG | 0.534470 | 5_3:+55962584 | Msa0819490:CDS |
AAGTTGTGGAGGAGATGAAG+GGG | 0.535784 | 5_3:+55962421 | Msa0819490:CDS |
TTAAGATTTATGTATCATGT+AGG | 0.536340 | 5_3:-55970373 | None:intergenic |
TGCAGCTTGAGCATTTGGAT+GGG | 0.537885 | 5_3:+55965066 | Msa0819490:intron |
TAGAAGTTCATAATTTGAGT+GGG | 0.539506 | 5_3:+55964333 | Msa0819490:CDS |
TACGACAACAAAATCATCGT+GGG | 0.540191 | 5_3:-55970545 | None:intergenic |
GACAACACTGCTCAATTCAA+GGG | 0.541270 | 5_3:-55963558 | None:intergenic |
TAGCAACTCTTGTAGATGAC+AGG | 0.541427 | 5_3:-55968324 | None:intergenic |
ATCACTCCTTTCATTAATCG+TGG | 0.544846 | 5_3:+55964552 | Msa0819490:CDS |
AGTCGACGCGGTCGATGAGA+AGG | 0.545118 | 5_3:-55961717 | None:intergenic |
TTTACTGTTTAGAGCAAACA+TGG | 0.546522 | 5_3:+55970606 | Msa0819490:three_prime_UTR |
GATTTCCAATGTGATTGGTA+AGG | 0.547907 | 5_3:-55963495 | None:intergenic |
TAGGCTATAGATAGTGCTGA+TGG | 0.550569 | 5_3:+55969188 | Msa0819490:intron |
GATTCCTCGAGAAATGAAAG+AGG | 0.550768 | 5_3:-55964579 | None:intergenic |
ATGACCTCGACACCGTCCTA+AGG | 0.551353 | 5_3:+55961857 | Msa0819490:CDS |
CGATGAGAAGGCGGAGATCG+GGG | 0.552325 | 5_3:-55961705 | None:intergenic |
CCTCGACACCGTCCTAAGGC+TGG | 0.558079 | 5_3:+55961861 | Msa0819490:CDS |
GATGAGAAGGCGGAGATCGG+GGG | 0.559128 | 5_3:-55961704 | None:intergenic |
AAGCTAGAAAGGCAGCTTGG+CGG | 0.563102 | 5_3:+55968704 | Msa0819490:intron |
AATAAGGAGTTGATCAGTTG+TGG | 0.563312 | 5_3:+55970021 | Msa0819490:CDS |
GTTTAGAGCAAACATGGGGA+TGG | 0.563622 | 5_3:+55970612 | Msa0819490:three_prime_UTR |
AATCTTAAAACACTCGAGGT+GGG | 0.563723 | 5_3:+55970388 | Msa0819490:three_prime_UTR |
AGATCTTCAAGAGACCCTGC+AGG | 0.564346 | 5_3:-55969816 | None:intergenic |
TTTAGAGCAAACATGGGGAT+GGG | 0.564659 | 5_3:+55970613 | Msa0819490:three_prime_UTR |
ATGTTTGCTCTAAACAGTAA+AGG | 0.565232 | 5_3:-55970604 | None:intergenic |
TGCGAAATCATCGTGGTGAG+AGG | 0.565282 | 5_3:-55961782 | None:intergenic |
GGAAGATGATCGAGAGCCGT+TGG | 0.565798 | 5_3:+55962608 | Msa0819490:CDS |
CATTTCGCCATCAGATGACA+AGG | 0.567463 | 5_3:+55965710 | Msa0819490:CDS |
GGTAGGATTGGACTTGGGAT+CGG | 0.567590 | 5_3:-55961756 | None:intergenic |
GTGAAGCTAGAAAGGCAGCT+TGG | 0.570733 | 5_3:+55968701 | Msa0819490:intron |
ATCTTAAAACACTCGAGGTG+GGG | 0.571831 | 5_3:+55970389 | Msa0819490:three_prime_UTR |
AATTCAAGGGTTAAACTTAG+CGG | 0.575667 | 5_3:-55963545 | None:intergenic |
TTATCAGGTCTCAGAGCGAC+CGG | 0.577055 | 5_3:+55962380 | Msa0819490:intron |
ACCGGCGGATGTGGAGGTGA+GGG | 0.577208 | 5_3:+55962398 | Msa0819490:CDS |
ACACCCAATATCAGCCGATA+CGG | 0.578520 | 5_3:+55963629 | Msa0819490:CDS |
TTAGAAGTTCATAATTTGAG+TGG | 0.579780 | 5_3:+55964332 | Msa0819490:CDS |
AAATCTTAAAACACTCGAGG+TGG | 0.580083 | 5_3:+55970387 | Msa0819490:three_prime_UTR |
GAGATTCCATGGAGCGACGG+TGG | 0.580992 | 5_3:-55961609 | None:intergenic |
ACAACCTCTTTCATTTCTCG+AGG | 0.580997 | 5_3:+55964575 | Msa0819490:CDS |
GGAGGTGAGGGAAGTTGTGG+AGG | 0.583596 | 5_3:+55962410 | Msa0819490:CDS |
GGAAAAGGTGCATATCATAT+GGG | 0.584202 | 5_3:+55969495 | Msa0819490:CDS |
AGAGCGACCGGCGGATGTGG+AGG | 0.584806 | 5_3:+55962392 | Msa0819490:CDS |
GGTTCTATTTGGAAGAATGA+CGG | 0.585999 | 5_3:+55965947 | Msa0819490:CDS |
ACTAATTCATCAAACACTGC+AGG | 0.586167 | 5_3:+55966060 | Msa0819490:CDS |
TGAAACGGCGTCGTTGCAGA+GGG | 0.586873 | 5_3:-55961815 | None:intergenic |
TGATTGTAGGGTTGAATGAG+AGG | 0.587281 | 5_3:+55962493 | Msa0819490:CDS |
CCTTCAAGTTATAAATAACA+AGG | 0.587408 | 5_3:-55969059 | None:intergenic |
TGGAGAGAGTGATCGAGGGG+TGG | 0.589823 | 5_3:-55961589 | None:intergenic |
TCCCTCACCTCCACATCCGC+CGG | 0.592378 | 5_3:-55962399 | None:intergenic |
TAGGACGGTGTCGAGGTCAT+CGG | 0.594649 | 5_3:-55961854 | None:intergenic |
CGAAGTAGTAGTCCCTGTCA+AGG | 0.594676 | 5_3:+55968387 | Msa0819490:CDS |
AGTTGAAGGTTGCTGCGGAA+GGG | 0.594847 | 5_3:+55962550 | Msa0819490:CDS |
GTATCGGCTGATATTGGGTG+TGG | 0.597291 | 5_3:-55963627 | None:intergenic |
GGTTGTCCACGATTAATGAA+AGG | 0.600696 | 5_3:-55964558 | None:intergenic |
TTTGGGTTTGTAGATTCAAG+AGG | 0.602667 | 5_3:+55964238 | Msa0819490:intron |
TGTGTTGAAGAGAGATTCCA+TGG | 0.604731 | 5_3:-55961620 | None:intergenic |
GACGGTGGAGAGAGTGATCG+AGG | 0.608329 | 5_3:-55961594 | None:intergenic |
ACGGTGGAGAGAGTGATCGA+GGG | 0.608903 | 5_3:-55961593 | None:intergenic |
TCCACCATAATCCAATAGGA+TGG | 0.609863 | 5_3:+55963660 | Msa0819490:CDS |
TGATGGAACTATCTTCAGTA+CGG | 0.614875 | 5_3:-55964616 | None:intergenic |
TTCACCTTAATATCTGGTGA+TGG | 0.618184 | 5_3:-55964633 | None:intergenic |
GGTTGCGTTGAGAATTGGGG+AGG | 0.624026 | 5_3:+55962587 | Msa0819490:CDS |
TACTGTTTAGAGCAAACATG+GGG | 0.625569 | 5_3:+55970608 | Msa0819490:three_prime_UTR |
GATGACCTTACCAATCACAT+TGG | 0.625790 | 5_3:+55963490 | Msa0819490:intron |
AAACAATACCAGCCTTAGGA+CGG | 0.626051 | 5_3:-55961869 | None:intergenic |
GCCGCCACAGATATCTGCCA+TGG | 0.626710 | 5_3:-55963590 | None:intergenic |
ATTTGAGTGAGTTCCCTGCA+GGG | 0.627562 | 5_3:+55969802 | Msa0819490:CDS |
ATGTCAAACGTCCAAAACAT+CGG | 0.628718 | 5_3:-55965166 | None:intergenic |
AGAGAGATTCCATGGAGCGA+CGG | 0.629649 | 5_3:-55961612 | None:intergenic |
ATTTGGATCACCAGTGACCA+AGG | 0.632851 | 5_3:-55969781 | None:intergenic |
CTCAACAACCCATACACCAA+CGG | 0.632869 | 5_3:-55962624 | None:intergenic |
TTGTGGCTTTACTATATCGG+AGG | 0.633013 | 5_3:+55970038 | Msa0819490:CDS |
TAAGAAAAGATTGTTTACGG+AGG | 0.635266 | 5_3:+55970315 | Msa0819490:CDS |
GGCGAGGTAGGATTGGACTT+GGG | 0.637509 | 5_3:-55961761 | None:intergenic |
CGACGCGGTCGATGAGAAGG+CGG | 0.639225 | 5_3:-55961714 | None:intergenic |
TTGGTCGGAGAGATCTTGTG+CGG | 0.641921 | 5_3:-55961665 | None:intergenic |
ATGGGTTGTTGAGAAATGAA+TGG | 0.644923 | 5_3:+55962634 | Msa0819490:CDS |
GTGTTGTCAAATATCCGCCA+TGG | 0.645116 | 5_3:+55963573 | Msa0819490:CDS |
ATGGTCTCAGTGCTTTGAAG+AGG | 0.646726 | 5_3:+55962653 | Msa0819490:CDS |
TTACTGTTTAGAGCAAACAT+GGG | 0.647291 | 5_3:+55970607 | Msa0819490:three_prime_UTR |
TGGGAAGTTGAAGGTTGCTG+CGG | 0.650905 | 5_3:+55962545 | Msa0819490:CDS |
ATCGTGGTGAGAGGCGAGGT+AGG | 0.651312 | 5_3:-55961773 | None:intergenic |
TGTTATTTATAACTTGAAGG+AGG | 0.653765 | 5_3:+55969062 | Msa0819490:CDS |
GCCATCCTATTGGATTATGG+TGG | 0.655719 | 5_3:-55963661 | None:intergenic |
CATAAATCTTAAAACACTCG+AGG | 0.658578 | 5_3:+55970384 | Msa0819490:three_prime_UTR |
AATAGGATGGCATCACAAAG+TGG | 0.659590 | 5_3:+55963673 | Msa0819490:CDS |
GCCATGGCAGATATCTGTGG+CGG | 0.660225 | 5_3:+55963589 | Msa0819490:CDS |
CGGTGGAGAGAGTGATCGAG+GGG | 0.660758 | 5_3:-55961592 | None:intergenic |
GATCTTCAAGAGACCCTGCA+GGG | 0.660828 | 5_3:-55969815 | None:intergenic |
TATCCTGTCATCCAGCCATG+TGG | 0.664379 | 5_3:+55965976 | Msa0819490:CDS |
TCAGATGCAAGAATTTGAGT+CGG | 0.666155 | 5_3:+55969226 | Msa0819490:CDS |
AAAAGCTGTGCGATTTGATG+GGG | 0.672870 | 5_3:+55964280 | Msa0819490:CDS |
AATCATCGTGGTGAGAGGCG+AGG | 0.679007 | 5_3:-55961777 | None:intergenic |
TCCGCCATGGCAGATATCTG+TGG | 0.679991 | 5_3:+55963586 | Msa0819490:CDS |
TGCATGGACTAACCTTGACA+GGG | 0.681287 | 5_3:-55968399 | None:intergenic |
CCAGCCTTAGGACGGTGTCG+AGG | 0.686134 | 5_3:-55961861 | None:intergenic |
GCCACAGATATCTGCCATGG+CGG | 0.692840 | 5_3:-55963587 | None:intergenic |
ACGACAACAAAATCATCGTG+GGG | 0.696180 | 5_3:-55970544 | None:intergenic |
AGAAAATCAAATCTACCACA+TGG | 0.698503 | 5_3:-55965991 | None:intergenic |
GGTGAGAATGGGAGTCGACG+CGG | 0.701446 | 5_3:-55961729 | None:intergenic |
TCAGGTCTCAGAGCGACCGG+CGG | 0.705257 | 5_3:+55962383 | Msa0819490:intron |
ATATGTTATGCCTACCAGTG+AGG | 0.706831 | 5_3:+55970717 | Msa0819490:three_prime_UTR |
ATTAGATGATGATCCCTCCG+AGG | 0.735011 | 5_3:+55970420 | Msa0819490:three_prime_UTR |
AGAGATTTGCGAAATCATCG+TGG | 0.739362 | 5_3:-55961789 | None:intergenic |
TTACGACAACAAAATCATCG+TGG | 0.759213 | 5_3:-55970546 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATAACTGAAAAATTAAA+AGG | + | chr5_3:55966187-55966206 | Msa0819490:intron | 10.0% |
!! | GACTATATATATTATTTAAT+GGG | + | chr5_3:55967134-55967153 | Msa0819490:intron | 10.0% |
!! | TCATATCATAAATTAAATAA+GGG | - | chr5_3:55967302-55967321 | None:intergenic | 10.0% |
!! | TCGATAAAAAAAAAAAAAAA+GGG | - | chr5_3:55970797-55970816 | None:intergenic | 10.0% |
!! | AATTGTATGTGTAAAATAAT+TGG | - | chr5_3:55962160-55962179 | None:intergenic | 15.0% |
!! | TTGAATAAAAATTATGTGAT+TGG | + | chr5_3:55962973-55962992 | Msa0819490:intron | 15.0% |
!! | TGAATAAAAATTATGTGATT+GGG | + | chr5_3:55962974-55962993 | Msa0819490:intron | 15.0% |
!!! | TCTATTTTTTCAAATAAAAC+AGG | - | chr5_3:55963402-55963421 | None:intergenic | 15.0% |
!! | TTCTATTCTTAGATTTATTA+GGG | - | chr5_3:55963523-55963542 | None:intergenic | 15.0% |
!! | ATTCTATTCTTAGATTTATT+AGG | - | chr5_3:55963524-55963543 | None:intergenic | 15.0% |
!! | AAAATGAAAATCAGATATTT+AGG | - | chr5_3:55965047-55965066 | None:intergenic | 15.0% |
!!! | TAATTTTTCAGTTATATAAC+AGG | - | chr5_3:55966185-55966204 | None:intergenic | 15.0% |
!! | TAAATAATATATATAGTCGA+TGG | - | chr5_3:55967132-55967151 | None:intergenic | 15.0% |
!! | CGACTATATATATTATTTAA+TGG | + | chr5_3:55967133-55967152 | Msa0819490:intron | 15.0% |
!! | GTCATATCATAAATTAAATA+AGG | - | chr5_3:55967303-55967322 | None:intergenic | 15.0% |
!! | ACAAATAGTTAAATTAAATG+AGG | - | chr5_3:55967437-55967456 | None:intergenic | 15.0% |
!!! | GATTTTCAAACAAAAAAAAA+TGG | + | chr5_3:55967637-55967656 | Msa0819490:intron | 15.0% |
!!! | TACATTCACATAAATATTTT+CGG | + | chr5_3:55967922-55967941 | Msa0819490:intron | 15.0% |
!!! | AAATGATATATTGATTGATT+TGG | + | chr5_3:55968030-55968049 | Msa0819490:intron | 15.0% |
!! | GATTAAAGAAATACTAAAAA+GGG | - | chr5_3:55968446-55968465 | None:intergenic | 15.0% |
!! | AGATTAAAGAAATACTAAAA+AGG | - | chr5_3:55968447-55968466 | None:intergenic | 15.0% |
!!! | TTTTTAGTATTTCTTTAATC+TGG | + | chr5_3:55968446-55968465 | Msa0819490:intron | 15.0% |
!!! | TAATCTTATATTTTTCTACA+AGG | + | chr5_3:55968857-55968876 | Msa0819490:intron | 15.0% |
!!! | TACAAATGTTTTTATATATC+TGG | - | chr5_3:55970755-55970774 | None:intergenic | 15.0% |
!! | CTCGATAAAAAAAAAAAAAA+AGG | - | chr5_3:55970798-55970817 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTTATCGAGTTA+AGG | + | chr5_3:55970801-55970820 | Msa0819490:three_prime_UTR | 15.0% |
!!! | GATTAATTTTTATGAACTGA+CGG | + | chr5_3:55961940-55961959 | Msa0819490:intron | 20.0% |
!!! | TTAAAAAAGTTTTACACTGT+CGG | + | chr5_3:55962079-55962098 | Msa0819490:intron | 20.0% |
!!! | GATTTTGAATTTGTTTGAAA+TGG | + | chr5_3:55963029-55963048 | Msa0819490:intron | 20.0% |
!! | AAAGAAAAGATTAATAGCTT+GGG | + | chr5_3:55963096-55963115 | Msa0819490:intron | 20.0% |
!!! | ATGCTTTTTAAGAAAATACT+TGG | - | chr5_3:55963313-55963332 | None:intergenic | 20.0% |
!! | GCTACTTATTAAAATACTTA+AGG | - | chr5_3:55963799-55963818 | None:intergenic | 20.0% |
!! | TATATGATAATCAATTGTGT+AGG | + | chr5_3:55963822-55963841 | Msa0819490:intron | 20.0% |
!! | ATATGATAATCAATTGTGTA+GGG | + | chr5_3:55963823-55963842 | Msa0819490:intron | 20.0% |
!!! | TGATTTTCACATTTTTGTTT+GGG | - | chr5_3:55963884-55963903 | None:intergenic | 20.0% |
!!! | ATGATTTTCACATTTTTGTT+TGG | - | chr5_3:55963885-55963904 | None:intergenic | 20.0% |
!! | TAATGTGTAATTGTAACATA+AGG | + | chr5_3:55963956-55963975 | Msa0819490:intron | 20.0% |
!!! | TGATGTATTTTCCAAATAAT+TGG | + | chr5_3:55964067-55964086 | Msa0819490:intron | 20.0% |
!! | TGTTATTGATCTTATTCTTA+GGG | + | chr5_3:55964752-55964771 | Msa0819490:intron | 20.0% |
!! | TAATAATATCTAAGAGGATT+TGG | - | chr5_3:55964955-55964974 | None:intergenic | 20.0% |
!! | AACTGATAATAATATCTAAG+AGG | - | chr5_3:55964961-55964980 | None:intergenic | 20.0% |
!!! | TAAAATACTTTGTTTCTTTC+TGG | - | chr5_3:55965519-55965538 | None:intergenic | 20.0% |
!!! | TAAAATACTTTGTTTCTTTC+TGG | - | chr5_3:55965519-55965538 | None:intergenic | 20.0% |
!! | TAAATATTCATTATTCTGGA+TGG | - | chr5_3:55966090-55966109 | None:intergenic | 20.0% |
!! | GTTGTAAATATTCATTATTC+TGG | - | chr5_3:55966094-55966113 | None:intergenic | 20.0% |
!!! | AGGTAGAAATATTTAAAGTT+AGG | - | chr5_3:55966165-55966184 | None:intergenic | 20.0% |
!!! | TAGTATTTTTTTCATCACAT+TGG | - | chr5_3:55966318-55966337 | None:intergenic | 20.0% |
!! | CAGTATAAATCTCTAATTAA+AGG | - | chr5_3:55966924-55966943 | None:intergenic | 20.0% |
!!! | TCATTTTCAAATATGAATAC+TGG | + | chr5_3:55967022-55967041 | Msa0819490:intron | 20.0% |
!!! | TTATTTAATGGGTCTTATTA+AGG | + | chr5_3:55967145-55967164 | Msa0819490:intron | 20.0% |
!! | TCTTTAAGCATACTAAATTA+AGG | + | chr5_3:55967184-55967203 | Msa0819490:intron | 20.0% |
!! | TCATAAAAAGTTACCATTTA+AGG | + | chr5_3:55967239-55967258 | Msa0819490:intron | 20.0% |
!! | TAGAGATACTATCATTAAAT+CGG | - | chr5_3:55967407-55967426 | None:intergenic | 20.0% |
!! | GAATGAAATATAAGCAAAAA+TGG | - | chr5_3:55967583-55967602 | None:intergenic | 20.0% |
!!! | TTTTTGCTTATATTTCATTC+TGG | + | chr5_3:55967583-55967602 | Msa0819490:intron | 20.0% |
!! | TAGTTAATAATATAGCAGAA+AGG | + | chr5_3:55967672-55967691 | Msa0819490:intron | 20.0% |
!! | TGTACAAATAACCATATAAT+TGG | + | chr5_3:55968178-55968197 | Msa0819490:intron | 20.0% |
!! | AGTTATATTTGTACATATGT+CGG | - | chr5_3:55968212-55968231 | None:intergenic | 20.0% |
!! | ACTGTTAAGAAAAAGAAAAA+AGG | - | chr5_3:55968258-55968277 | None:intergenic | 20.0% |
!! | GTGAATTTGATCTTTATAAA+TGG | + | chr5_3:55968276-55968295 | Msa0819490:intron | 20.0% |
!! | TTTAATCTGGTATTTACTTT+AGG | + | chr5_3:55968459-55968478 | Msa0819490:intron | 20.0% |
!! | TTAATCTGGTATTTACTTTA+GGG | + | chr5_3:55968460-55968479 | Msa0819490:intron | 20.0% |
!! | AAATTATAAAAAACAGCGAA+AGG | - | chr5_3:55968549-55968568 | None:intergenic | 20.0% |
!!! | TTTATAATTTTTCTGATCTC+TGG | + | chr5_3:55968559-55968578 | Msa0819490:intron | 20.0% |
!!! | GAAAAAATCTAAAACAAACA+AGG | - | chr5_3:55968900-55968919 | None:intergenic | 20.0% |
!!! | AATTTGTTACAACTTACAAT+TGG | + | chr5_3:55969389-55969408 | Msa0819490:intron | 20.0% |
!! | TATACGAGTAAATAATAATC+CGG | - | chr5_3:55969921-55969940 | None:intergenic | 20.0% |
!!! | TAACATTTTATCAGAATCAT+TGG | - | chr5_3:55970153-55970172 | None:intergenic | 20.0% |
!! | ATATGTAAGAAACATATGTT+AGG | - | chr5_3:55970234-55970253 | None:intergenic | 20.0% |
!!! | CTTTAAGAAAAGATTGTTTA+CGG | + | chr5_3:55970312-55970331 | Msa0819490:CDS | 20.0% |
!! | TTAAGATTTATGTATCATGT+AGG | - | chr5_3:55970376-55970395 | None:intergenic | 20.0% |
!! | TCATTTTCTTAAACTACTAC+CGG | - | chr5_3:55962743-55962762 | None:intergenic | 25.0% |
!!! | ATAATCACATGTTTTGATGT+CGG | + | chr5_3:55962774-55962793 | Msa0819490:intron | 25.0% |
! | AAAATTATGTGATTGGGATT+TGG | + | chr5_3:55962980-55962999 | Msa0819490:intron | 25.0% |
!! | TTGAATTTGTTTGAAATGGA+AGG | + | chr5_3:55963033-55963052 | Msa0819490:intron | 25.0% |
! | CAAAGAAAAGATTAATAGCT+TGG | + | chr5_3:55963095-55963114 | Msa0819490:intron | 25.0% |
!!! | TATTTTCTTAAAAAGCATCG+AGG | + | chr5_3:55963315-55963334 | Msa0819490:intron | 25.0% |
!! | TGTGATTTTTATTGAGTTTG+TGG | + | chr5_3:55964195-55964214 | Msa0819490:intron | 25.0% |
!!! | TTTTTAGAGGAATTCGATTT+GGG | + | chr5_3:55964221-55964240 | Msa0819490:intron | 25.0% |
! | TTAGAAGTTCATAATTTGAG+TGG | + | chr5_3:55964332-55964351 | Msa0819490:CDS | 25.0% |
! | TAGAAGTTCATAATTTGAGT+GGG | + | chr5_3:55964333-55964352 | Msa0819490:CDS | 25.0% |
!!! | CTTCTAATTGTTGACTTTTT+AGG | + | chr5_3:55964470-55964489 | Msa0819490:intron | 25.0% |
! | ATTACATTCACCTTAATATC+TGG | - | chr5_3:55964642-55964661 | None:intergenic | 25.0% |
!! | GTGTTATTGATCTTATTCTT+AGG | + | chr5_3:55964751-55964770 | Msa0819490:intron | 25.0% |
! | TTACAATATCAACCATTGAT+TGG | + | chr5_3:55964878-55964897 | Msa0819490:intron | 25.0% |
!! | TACAATATCAACCATTGATT+GGG | + | chr5_3:55964879-55964898 | Msa0819490:intron | 25.0% |
! | AATATCAAGCTTTCTTTCAA+AGG | + | chr5_3:55965211-55965230 | Msa0819490:CDS | 25.0% |
!!! | TCAATGAAACATCATTTTTG+TGG | - | chr5_3:55965333-55965352 | None:intergenic | 25.0% |
! | TATAATCTAGGAGAATTACT+TGG | + | chr5_3:55965470-55965489 | Msa0819490:intron | 25.0% |
!!! | TTGATGATTTTCTGAAAATC+AGG | - | chr5_3:55965648-55965667 | None:intergenic | 25.0% |
!!! | ATGTACATCTGATTTTGAAA+CGG | + | chr5_3:55965668-55965687 | Msa0819490:CDS | 25.0% |
!!! | ATTTGATTTTCTTATCAGAG+AGG | + | chr5_3:55966002-55966021 | Msa0819490:CDS | 25.0% |
! | CAAAAGTTAGTATAATGAGT+TGG | - | chr5_3:55966448-55966467 | None:intergenic | 25.0% |
! | TTTGAAAATGACATCATTAC+AGG | - | chr5_3:55967013-55967032 | None:intergenic | 25.0% |
!!! | GACATAGTTATTTTGAGATT+AGG | + | chr5_3:55967044-55967063 | Msa0819490:intron | 25.0% |
!!! | ATTTTAGCCAATGAGATAAT+CGG | - | chr5_3:55967325-55967344 | None:intergenic | 25.0% |
! | AAGTTACATTGTCTAAGTTT+AGG | + | chr5_3:55967811-55967830 | Msa0819490:intron | 25.0% |
! | AGTTACATTGTCTAAGTTTA+GGG | + | chr5_3:55967812-55967831 | Msa0819490:intron | 25.0% |
! | TATTAGTGACATAAAAGAAG+GGG | - | chr5_3:55967841-55967860 | None:intergenic | 25.0% |
! | CTATTAGTGACATAAAAGAA+GGG | - | chr5_3:55967842-55967861 | None:intergenic | 25.0% |
! | ACTATTAGTGACATAAAAGA+AGG | - | chr5_3:55967843-55967862 | None:intergenic | 25.0% |
!!! | AAAGAAACTGAAAAAGTGTT+TGG | + | chr5_3:55967967-55967986 | Msa0819490:intron | 25.0% |
!!! | AAGAAACTGAAAAAGTGTTT+GGG | + | chr5_3:55967968-55967987 | Msa0819490:intron | 25.0% |
! | AAAATACATGATTGCATATG+TGG | + | chr5_3:55968054-55968073 | Msa0819490:intron | 25.0% |
! | AAATACATGATTGCATATGT+GGG | + | chr5_3:55968055-55968074 | Msa0819490:intron | 25.0% |
! | TGGTTATTTGTACATATAGT+TGG | - | chr5_3:55968172-55968191 | None:intergenic | 25.0% |
! | TAATCTGGTATTTACTTTAG+GGG | + | chr5_3:55968461-55968480 | Msa0819490:intron | 25.0% |
! | TTGAGAATAACATCATGATA+AGG | - | chr5_3:55968602-55968621 | None:intergenic | 25.0% |
!! | CCTTCAAGTTATAAATAACA+AGG | - | chr5_3:55969062-55969081 | None:intergenic | 25.0% |
!!! | CCTTGTTATTTATAACTTGA+AGG | + | chr5_3:55969059-55969078 | Msa0819490:CDS | 25.0% |
!! | TGTTATTTATAACTTGAAGG+AGG | + | chr5_3:55969062-55969081 | Msa0819490:CDS | 25.0% |
! | ATCTATAGCCTATAAAACAT+GGG | - | chr5_3:55969180-55969199 | None:intergenic | 25.0% |
! | TATCTATAGCCTATAAAACA+TGG | - | chr5_3:55969181-55969200 | None:intergenic | 25.0% |
! | TACAATTGGCTAAATAAGAA+TGG | + | chr5_3:55969403-55969422 | Msa0819490:intron | 25.0% |
!! | AAATGTTAGCTTATGTCATT+CGG | - | chr5_3:55969451-55969470 | None:intergenic | 25.0% |
! | ACAGTGTCTACATAAAAATT+GGG | - | chr5_3:55969895-55969914 | None:intergenic | 25.0% |
! | AACAGTGTCTACATAAAAAT+TGG | - | chr5_3:55969896-55969915 | None:intergenic | 25.0% |
!! | AATTTTTATGTAGACACTGT+TGG | + | chr5_3:55969895-55969914 | Msa0819490:intron | 25.0% |
!!! | TCAATGGCTTTATTTCTTTA+TGG | + | chr5_3:55970074-55970093 | Msa0819490:intron | 25.0% |
! | AAGAAAAGGTTCATTAAGTA+CGG | - | chr5_3:55970199-55970218 | None:intergenic | 25.0% |
!! | CGTAAACAATCTTTTCTTAA+AGG | - | chr5_3:55970314-55970333 | None:intergenic | 25.0% |
! | AACATTTGTAGCTCAAATTT+CGG | + | chr5_3:55970765-55970784 | Msa0819490:three_prime_UTR | 25.0% |
CTGATAAAAACTTCGACTTA+TGG | - | chr5_3:55961517-55961536 | None:intergenic | 30.0% | |
! | TCGAAGTTTTTATCAGTGTT+GGG | + | chr5_3:55961521-55961540 | Msa0819490:five_prime_UTR | 30.0% |
!! | TTTTTGTTTGGACTTGACTA+TGG | - | chr5_3:55961566-55961585 | None:intergenic | 30.0% |
TAGCAACTAACCTAAAAATG+TGG | + | chr5_3:55962026-55962045 | Msa0819490:intron | 30.0% | |
!! | TATCAGTTTAGCTCTACATA+TGG | + | chr5_3:55962106-55962125 | Msa0819490:intron | 30.0% |
TACACATGCATCTAATAATG+TGG | - | chr5_3:55962243-55962262 | None:intergenic | 30.0% | |
CTGCAACTAAAAACATTATC+AGG | + | chr5_3:55962365-55962384 | Msa0819490:intron | 30.0% | |
AGTTTCATTGCAATGTATGT+AGG | + | chr5_3:55962860-55962879 | Msa0819490:intron | 30.0% | |
GTGATAGATGAAACTGAAAT+TGG | + | chr5_3:55962912-55962931 | Msa0819490:intron | 30.0% | |
GATGAAACTGAAATTGGTAT+TGG | + | chr5_3:55962918-55962937 | Msa0819490:intron | 30.0% | |
AAATGGAAGGAATTGCATTT+AGG | + | chr5_3:55963046-55963065 | Msa0819490:intron | 30.0% | |
AATGGAAGGAATTGCATTTA+GGG | + | chr5_3:55963047-55963066 | Msa0819490:intron | 30.0% | |
TTTCCAAATAACTCAGTACT+TGG | - | chr5_3:55963166-55963185 | None:intergenic | 30.0% | |
AAAGAAAGAACAGTATCCAT+GGG | - | chr5_3:55963204-55963223 | None:intergenic | 30.0% | |
TAAAGAAAGAACAGTATCCA+TGG | - | chr5_3:55963205-55963224 | None:intergenic | 30.0% | |
CTTTCTTTATCATGTGTAGT+TGG | + | chr5_3:55963216-55963235 | Msa0819490:intron | 30.0% | |
AAAAAGAACAAGAACAAGCA+TGG | + | chr5_3:55963421-55963440 | Msa0819490:intron | 30.0% | |
AAAAGAACAAGAACAAGCAT+GGG | + | chr5_3:55963422-55963441 | Msa0819490:intron | 30.0% | |
AATTCAAGGGTTAAACTTAG+CGG | - | chr5_3:55963548-55963567 | None:intergenic | 30.0% | |
AATTTCCACCATAATCCAAT+AGG | + | chr5_3:55963656-55963675 | Msa0819490:CDS | 30.0% | |
! | ATGTGTCATATCTTTGAAGA+GGG | - | chr5_3:55963916-55963935 | None:intergenic | 30.0% |
AACATAAGGAAATATGAGTC+TGG | + | chr5_3:55963970-55963989 | Msa0819490:intron | 30.0% | |
ACATAAGGAAATATGAGTCT+GGG | + | chr5_3:55963971-55963990 | Msa0819490:intron | 30.0% | |
AGCAATTATGGCCAATTATT+TGG | - | chr5_3:55964081-55964100 | None:intergenic | 30.0% | |
AATCATCGCTAAAGCAATTA+TGG | - | chr5_3:55964093-55964112 | None:intergenic | 30.0% | |
GATTGTACTGTTACACATAT+TGG | - | chr5_3:55964133-55964152 | None:intergenic | 30.0% | |
TTATCCCTTCATCATTTCTA+TGG | - | chr5_3:55964173-55964192 | None:intergenic | 30.0% | |
!! | GTTTTTAGAGGAATTCGATT+TGG | + | chr5_3:55964220-55964239 | Msa0819490:intron | 30.0% |
!!! | CTAATTGTTGACTTTTTAGG+TGG | + | chr5_3:55964473-55964492 | Msa0819490:intron | 30.0% |
TAAGGTGAATGTAATGTGTT+AGG | + | chr5_3:55964647-55964666 | Msa0819490:intron | 30.0% | |
AAGGTGAATGTAATGTGTTA+GGG | + | chr5_3:55964648-55964667 | Msa0819490:intron | 30.0% | |
AGAGTAATAAACCCAATCAA+TGG | - | chr5_3:55964893-55964912 | None:intergenic | 30.0% | |
TTCAAATGCAACATTCACTT+TGG | - | chr5_3:55964928-55964947 | None:intergenic | 30.0% | |
TATCAGTTCTTATTGTTGAG+AGG | + | chr5_3:55964973-55964992 | Msa0819490:intron | 30.0% | |
!! | ATTATTAGCTCTGATATCCT+AGG | - | chr5_3:55965194-55965213 | None:intergenic | 30.0% |
TAACAAACGTGGTTATACAA+AGG | + | chr5_3:55965255-55965274 | Msa0819490:intron | 30.0% | |
!!! | CAAACAGGAACTTATTTTGT+TGG | - | chr5_3:55965428-55965447 | None:intergenic | 30.0% |
CCTAGATTATAACATTGTCA+GGG | - | chr5_3:55965461-55965480 | None:intergenic | 30.0% | |
TCCTAGATTATAACATTGTC+AGG | - | chr5_3:55965462-55965481 | None:intergenic | 30.0% | |
!! | TTTGTTTCTTTCTGGTTTCT+AGG | - | chr5_3:55965511-55965530 | None:intergenic | 30.0% |
TAAGAAAAAGACTGAGATCT+TGG | + | chr5_3:55965782-55965801 | Msa0819490:CDS | 30.0% | |
TGAAAAGTGAAAACTCACTT+GGG | - | chr5_3:55965850-55965869 | None:intergenic | 30.0% | |
AGAAAATCAAATCTACCACA+TGG | - | chr5_3:55965994-55966013 | None:intergenic | 30.0% | |
AATTAGTTCCATCAATTGCT+TGG | - | chr5_3:55966047-55966066 | None:intergenic | 30.0% | |
GAAAAAACTGGATTGCAATT+GGG | - | chr5_3:55966118-55966137 | None:intergenic | 30.0% | |
CTTGTAAAATCGAAATCTTG+AGG | + | chr5_3:55966256-55966275 | Msa0819490:intron | 30.0% | |
!! | AAACACATGTTCTTTTGACT+AGG | - | chr5_3:55966585-55966604 | None:intergenic | 30.0% |
AAAAGAACATGTGTTTCCTA+TGG | + | chr5_3:55966589-55966608 | Msa0819490:intron | 30.0% | |
AAAGAACATGTGTTTCCTAT+GGG | + | chr5_3:55966590-55966609 | Msa0819490:intron | 30.0% | |
TGTGTACCATAATTCTTCAT+CGG | + | chr5_3:55966631-55966650 | Msa0819490:intron | 30.0% | |
CATAATTCTTCATCGGATAA+GGG | + | chr5_3:55966638-55966657 | Msa0819490:intron | 30.0% | |
! | CTTAATCATTTTACCCTTAC+AGG | - | chr5_3:55966846-55966865 | None:intergenic | 30.0% |
!! | AAGTGACTTGCTTCTTATTA+TGG | + | chr5_3:55966863-55966882 | Msa0819490:intron | 30.0% |
AATCCAAGTGTAATGATAGT+TGG | - | chr5_3:55966893-55966912 | None:intergenic | 30.0% | |
AGCTTGTAAGGTGAATAATA+TGG | - | chr5_3:55966978-55966997 | None:intergenic | 30.0% | |
CAATGGTTAAAGACCTTAAA+TGG | - | chr5_3:55967255-55967274 | None:intergenic | 30.0% | |
AACCAATCTAGTATTAGTCA+TGG | + | chr5_3:55967467-55967486 | Msa0819490:intron | 30.0% | |
AATCTAGTATTAGTCATGGA+GGG | + | chr5_3:55967471-55967490 | Msa0819490:intron | 30.0% | |
TGCTTATATTTCATTCTGGA+AGG | + | chr5_3:55967587-55967606 | Msa0819490:intron | 30.0% | |
TAAATGTGTGAGATATTGTC+TGG | + | chr5_3:55967738-55967757 | Msa0819490:intron | 30.0% | |
ATAGTATCAAGCGTATATTC+AGG | - | chr5_3:55967892-55967911 | None:intergenic | 30.0% | |
AGTTTCTTTCAAATCTAGCA+AGG | - | chr5_3:55967956-55967975 | None:intergenic | 30.0% | |
AATACATGATTGCATATGTG+GGG | + | chr5_3:55968056-55968075 | Msa0819490:intron | 30.0% | |
AATGGATAAATAAACTGTGC+AGG | + | chr5_3:55968294-55968313 | Msa0819490:intron | 30.0% | |
AATCTGGTATTTACTTTAGG+GGG | + | chr5_3:55968462-55968481 | Msa0819490:intron | 30.0% | |
!! | TTTGATTTGTGAAGCTAGAA+AGG | + | chr5_3:55968693-55968712 | Msa0819490:intron | 30.0% |
TCTATAGCCTATAAAACATG+GGG | - | chr5_3:55969179-55969198 | None:intergenic | 30.0% | |
TAGGAGATAAAGCAAACTAT+GGG | - | chr5_3:55969324-55969343 | None:intergenic | 30.0% | |
ATAGGAGATAAAGCAAACTA+TGG | - | chr5_3:55969325-55969344 | None:intergenic | 30.0% | |
AAGAGAAAAAAGGAGGAAAT+AGG | - | chr5_3:55969343-55969362 | None:intergenic | 30.0% | |
AAGCTAACATTTACTTGATC+AGG | + | chr5_3:55969459-55969478 | Msa0819490:intron | 30.0% | |
TAAGTTAAAGGAAGCAAAAG+TGG | - | chr5_3:55969523-55969542 | None:intergenic | 30.0% | |
ATGCTCTTCTTGTAAGTTAA+AGG | - | chr5_3:55969535-55969554 | None:intergenic | 30.0% | |
! | TATTAGAGTCAGTTTTCTCT+AGG | + | chr5_3:55969563-55969582 | Msa0819490:CDS | 30.0% |
GTGGAAAGTCTTAACTAAAA+TGG | - | chr5_3:55969684-55969703 | None:intergenic | 30.0% | |
AAGACTAATCCATTTAATGC+TGG | + | chr5_3:55969734-55969753 | Msa0819490:CDS | 30.0% | |
! | ATAGGTTTTCCAGCATTAAA+TGG | - | chr5_3:55969746-55969765 | None:intergenic | 30.0% |
AGGACTCAAATAAAGATGAT+AGG | - | chr5_3:55969764-55969783 | None:intergenic | 30.0% | |
! | ATCATCTTTATTTGAGTCCT+TGG | + | chr5_3:55969764-55969783 | Msa0819490:CDS | 30.0% |
!! | ATGCCTTTAAAATCCATTAC+AGG | + | chr5_3:55969988-55970007 | Msa0819490:CDS | 30.0% |
!!! | GATCCTGTAATGGATTTTAA+AGG | - | chr5_3:55969994-55970013 | None:intergenic | 30.0% |
TAAAATCCATTACAGGATCT+TGG | + | chr5_3:55969995-55970014 | Msa0819490:CDS | 30.0% | |
AAAATCCATTACAGGATCTT+GGG | + | chr5_3:55969996-55970015 | Msa0819490:CDS | 30.0% | |
AGGTATCATTTGGTTATCAA+TGG | + | chr5_3:55970058-55970077 | Msa0819490:intron | 30.0% | |
!! | TCTTTATGGCTTTATAACTG+AGG | + | chr5_3:55970088-55970107 | Msa0819490:intron | 30.0% |
!! | CTTTATGGCTTTATAACTGA+GGG | + | chr5_3:55970089-55970108 | Msa0819490:intron | 30.0% |
!! | TATCAGAATCATTGGTAATG+TGG | - | chr5_3:55970145-55970164 | None:intergenic | 30.0% |
!!! | TCTTTTTTTGATCTCATTGC+AGG | + | chr5_3:55970253-55970272 | Msa0819490:intron | 30.0% |
TAAGAAAAGATTGTTTACGG+AGG | + | chr5_3:55970315-55970334 | Msa0819490:CDS | 30.0% | |
! | GATACAAAATACGAGCTTTT+AGG | + | chr5_3:55970337-55970356 | Msa0819490:CDS | 30.0% |
TTATGTATCATGTAGGAAGT+TGG | - | chr5_3:55970369-55970388 | None:intergenic | 30.0% | |
CATAAATCTTAAAACACTCG+AGG | + | chr5_3:55970384-55970403 | Msa0819490:three_prime_UTR | 30.0% | |
!!! | AAACTAACATGTTTTAGCCT+CGG | - | chr5_3:55970440-55970459 | None:intergenic | 30.0% |
! | ATGCTGATAATTTTCTGACA+TGG | + | chr5_3:55970515-55970534 | Msa0819490:three_prime_UTR | 30.0% |
! | ATGTTTGCTCTAAACAGTAA+AGG | - | chr5_3:55970607-55970626 | None:intergenic | 30.0% |
! | TTTACTGTTTAGAGCAAACA+TGG | + | chr5_3:55970606-55970625 | Msa0819490:three_prime_UTR | 30.0% |
! | TTACTGTTTAGAGCAAACAT+GGG | + | chr5_3:55970607-55970626 | Msa0819490:three_prime_UTR | 30.0% |
! | GCTAATTTGTCATCTACTAA+TGG | + | chr5_3:55970670-55970689 | Msa0819490:three_prime_UTR | 30.0% |
! | GTCGAAGTTTTTATCAGTGT+TGG | + | chr5_3:55961520-55961539 | Msa0819490:five_prime_UTR | 35.0% |
AACTTTAACGGTCTGTGAAA+CGG | - | chr5_3:55961833-55961852 | None:intergenic | 35.0% | |
TTTCAAACAATACCAGCCTT+AGG | - | chr5_3:55961876-55961895 | None:intergenic | 35.0% | |
! | CTTCATGATGCCACATTTTT+AGG | - | chr5_3:55962039-55962058 | None:intergenic | 35.0% |
GCATCATGAAGTGATTTGAT+TGG | + | chr5_3:55962048-55962067 | Msa0819490:intron | 35.0% | |
! | TCATGTGTCATTGTTTGATG+TGG | - | chr5_3:55962197-55962216 | None:intergenic | 35.0% |
AAGGTGAAAAGAGAGTTGTT+AGG | + | chr5_3:55962459-55962478 | Msa0819490:CDS | 35.0% | |
AGGTGAAAAGAGAGTTGTTA+GGG | + | chr5_3:55962460-55962479 | Msa0819490:CDS | 35.0% | |
TGAAGAAAGAGTTGAAGAGT+GGG | + | chr5_3:55962526-55962545 | Msa0819490:CDS | 35.0% | |
! | ATGGGTTGTTGAGAAATGAA+TGG | + | chr5_3:55962634-55962653 | Msa0819490:CDS | 35.0% |
! | TTTGGAATTATGCACTGGAA+TGG | + | chr5_3:55962998-55963017 | Msa0819490:intron | 35.0% |
TTATGCACTGGAATGGTTAA+AGG | + | chr5_3:55963005-55963024 | Msa0819490:intron | 35.0% | |
!! | TTTAGGGTTGGTGTATGAAT+AGG | + | chr5_3:55963063-55963082 | Msa0819490:intron | 35.0% |
AAGAAAGAACAGTATCCATG+GGG | - | chr5_3:55963203-55963222 | None:intergenic | 35.0% | |
!! | TTTCACTTTGCTGTTGATCT+GGG | + | chr5_3:55963245-55963264 | Msa0819490:intron | 35.0% |
! | CGATCTCTGAATCTTTTGTT+TGG | + | chr5_3:55963276-55963295 | Msa0819490:intron | 35.0% |
!! | CTTAAAAAGCATCGAGGTAT+CGG | + | chr5_3:55963321-55963340 | Msa0819490:intron | 35.0% |
TGAAAAGAAGCCAACTAAGT+AGG | + | chr5_3:55963344-55963363 | Msa0819490:intron | 35.0% | |
TAAAACAGGTATGCTGCAAA+TGG | - | chr5_3:55963388-55963407 | None:intergenic | 35.0% | |
AAAGAACAAGAACAAGCATG+GGG | + | chr5_3:55963423-55963442 | Msa0819490:intron | 35.0% | |
AGTTCAAATATTCTTGGCGT+GGG | - | chr5_3:55963461-55963480 | None:intergenic | 35.0% | |
GCTACCAGTTCAAATATTCT+TGG | - | chr5_3:55963467-55963486 | None:intergenic | 35.0% | |
GATTTCCAATGTGATTGGTA+AGG | - | chr5_3:55963498-55963517 | None:intergenic | 35.0% | |
ATTCAAGGGTTAAACTTAGC+GGG | - | chr5_3:55963547-55963566 | None:intergenic | 35.0% | |
!! | AGATAAGTTGGCTTCTTTTG+GGG | - | chr5_3:55963765-55963784 | None:intergenic | 35.0% |
!! | CAGATAAGTTGGCTTCTTTT+GGG | - | chr5_3:55963766-55963785 | None:intergenic | 35.0% |
! | GATGTGTCATATCTTTGAAG+AGG | - | chr5_3:55963917-55963936 | None:intergenic | 35.0% |
CATAAGGAAATATGAGTCTG+GGG | + | chr5_3:55963972-55963991 | Msa0819490:intron | 35.0% | |
ATAAGGAAATATGAGTCTGG+GGG | + | chr5_3:55963973-55963992 | Msa0819490:intron | 35.0% | |
GTATGCAAAAAATACCAGCA+GGG | + | chr5_3:55963995-55964014 | Msa0819490:intron | 35.0% | |
! | AAGGTAGATTGATGGTTAAG+GGG | - | chr5_3:55964028-55964047 | None:intergenic | 35.0% |
! | GAAGGTAGATTGATGGTTAA+GGG | - | chr5_3:55964029-55964048 | None:intergenic | 35.0% |
! | AGAAGGTAGATTGATGGTTA+AGG | - | chr5_3:55964030-55964049 | None:intergenic | 35.0% |
TTGTGCCATAGAAATGATGA+AGG | + | chr5_3:55964165-55964184 | Msa0819490:intron | 35.0% | |
TGTGCCATAGAAATGATGAA+GGG | + | chr5_3:55964166-55964185 | Msa0819490:intron | 35.0% | |
!!! | GAGTTTGTGGTTGTTTTTAG+AGG | + | chr5_3:55964208-55964227 | Msa0819490:intron | 35.0% |
! | TTTGGGTTTGTAGATTCAAG+AGG | + | chr5_3:55964238-55964257 | Msa0819490:intron | 35.0% |
! | CTTTTTCCATAAACTTCACG+AGG | - | chr5_3:55964265-55964284 | None:intergenic | 35.0% |
AAAAAGCTGTGCGATTTGAT+GGG | + | chr5_3:55964279-55964298 | Msa0819490:CDS | 35.0% | |
! | GATTCAGTTGCAAATGGTTT+TGG | + | chr5_3:55964355-55964374 | Msa0819490:CDS | 35.0% |
!!! | TTGTTGACTTTTTAGGTGGT+TGG | + | chr5_3:55964477-55964496 | Msa0819490:intron | 35.0% |
!! | TGGTTGGTATTCTAGAGTAT+GGG | + | chr5_3:55964493-55964512 | Msa0819490:CDS | 35.0% |
ATCACTCCTTTCATTAATCG+TGG | + | chr5_3:55964552-55964571 | Msa0819490:CDS | 35.0% | |
TGATGGAACTATCTTCAGTA+CGG | - | chr5_3:55964619-55964638 | None:intergenic | 35.0% | |
AGTTCCATCACCAGATATTA+AGG | + | chr5_3:55964629-55964648 | Msa0819490:CDS | 35.0% | |
TTCACCTTAATATCTGGTGA+TGG | - | chr5_3:55964636-55964655 | None:intergenic | 35.0% | |
AATGCAACATTCACTTTGGA+AGG | - | chr5_3:55964924-55964943 | None:intergenic | 35.0% | |
! | TATTGTTGAGAGGTTTTCTG+AGG | + | chr5_3:55964983-55965002 | Msa0819490:intron | 35.0% |
GCAAAATGACAATGATTCCT+AGG | - | chr5_3:55965012-55965031 | None:intergenic | 35.0% | |
ATGTCAAACGTCCAAAACAT+CGG | - | chr5_3:55965169-55965188 | None:intergenic | 35.0% | |
GTTCTATGCTATAACAAACG+TGG | + | chr5_3:55965244-55965263 | Msa0819490:intron | 35.0% | |
CAAGATGTAATGCATGAACA+CGG | - | chr5_3:55965281-55965300 | None:intergenic | 35.0% | |
CCCTGACAATGTTATAATCT+AGG | + | chr5_3:55965458-55965477 | Msa0819490:intron | 35.0% | |
AATCTAGGAGAATTACTTGG+TGG | + | chr5_3:55965473-55965492 | Msa0819490:intron | 35.0% | |
TCTTGAGTGACTATATGGAT+AGG | - | chr5_3:55965585-55965604 | None:intergenic | 35.0% | |
AGACATCTTGAGTGACTATA+TGG | - | chr5_3:55965590-55965609 | None:intergenic | 35.0% | |
! | CAATTTTGCTGAAAATGTCG+AGG | + | chr5_3:55965746-55965765 | Msa0819490:CDS | 35.0% |
GAAAAGTGAAAACTCACTTG+GGG | - | chr5_3:55965849-55965868 | None:intergenic | 35.0% | |
CTGAAAAGTGAAAACTCACT+TGG | - | chr5_3:55965851-55965870 | None:intergenic | 35.0% | |
!! | TGAGTTTTCACTTTTCAGAC+TGG | + | chr5_3:55965853-55965872 | Msa0819490:intron | 35.0% |
!! | GAGTTTTCACTTTTCAGACT+GGG | + | chr5_3:55965854-55965873 | Msa0819490:intron | 35.0% |
!! | GTTGATGAAGAATTTTCTGC+AGG | + | chr5_3:55965910-55965929 | Msa0819490:intron | 35.0% |
!! | ATTTTCTGCAGGAGTATACA+AGG | + | chr5_3:55965921-55965940 | Msa0819490:intron | 35.0% |
!! | TTTTCTGCAGGAGTATACAA+GGG | + | chr5_3:55965922-55965941 | Msa0819490:intron | 35.0% |
! | ATACAAGGGATGGTTCTATT+TGG | + | chr5_3:55965936-55965955 | Msa0819490:CDS | 35.0% |
GGTTCTATTTGGAAGAATGA+CGG | + | chr5_3:55965947-55965966 | Msa0819490:CDS | 35.0% | |
!! | TTTCTTATCAGAGAGGTGTT+TGG | + | chr5_3:55966009-55966028 | Msa0819490:CDS | 35.0% |
ACTAATTCATCAAACACTGC+AGG | + | chr5_3:55966060-55966079 | Msa0819490:CDS | 35.0% | |
GGAAAAAACTGGATTGCAAT+TGG | - | chr5_3:55966119-55966138 | None:intergenic | 35.0% | |
! | TAATGAGTTGGATCAAAGTC+AGG | - | chr5_3:55966436-55966455 | None:intergenic | 35.0% |
!! | TTCTTTTGACTAGGTCACAA+AGG | - | chr5_3:55966576-55966595 | None:intergenic | 35.0% |
AAGAACATGTGTTTCCTATG+GGG | + | chr5_3:55966591-55966610 | Msa0819490:intron | 35.0% | |
CCTTATCCGATGAAGAATTA+TGG | - | chr5_3:55966640-55966659 | None:intergenic | 35.0% | |
CCATAATTCTTCATCGGATA+AGG | + | chr5_3:55966637-55966656 | Msa0819490:intron | 35.0% | |
AGTATGTTAAAAGGGGATCT+CGG | - | chr5_3:55966694-55966713 | None:intergenic | 35.0% | |
TTGAATGAAGATAGACGAAC+TGG | - | chr5_3:55966744-55966763 | None:intergenic | 35.0% | |
!! | TCATGTGACTCTGGAATATT+GGG | + | chr5_3:55966779-55966798 | Msa0819490:intron | 35.0% |
!! | TGACTTGCTTCTTATTATGG+CGG | + | chr5_3:55966866-55966885 | Msa0819490:intron | 35.0% |
AAATGTCATGTGAGCTTGTA+AGG | - | chr5_3:55966990-55967009 | None:intergenic | 35.0% | |
AGTTTGTGTAATCAGTGCAT+TGG | - | chr5_3:55967218-55967237 | None:intergenic | 35.0% | |
GATATGACCGATTATCTCAT+TGG | + | chr5_3:55967315-55967334 | Msa0819490:intron | 35.0% | |
CTCCATGACTAATACTAGAT+TGG | - | chr5_3:55967472-55967491 | None:intergenic | 35.0% | |
CAATCTAGTATTAGTCATGG+AGG | + | chr5_3:55967470-55967489 | Msa0819490:intron | 35.0% | |
TAATATAGCAGAAAGGAAGC+TGG | + | chr5_3:55967679-55967698 | Msa0819490:intron | 35.0% | |
AATATAGCAGAAAGGAAGCT+GGG | + | chr5_3:55967680-55967699 | Msa0819490:intron | 35.0% | |
TGGGCTTACTTATGAAGTTA+AGG | + | chr5_3:55967699-55967718 | Msa0819490:intron | 35.0% | |
TGAGATATTGTCTGGTTGTA+TGG | + | chr5_3:55967746-55967765 | Msa0819490:intron | 35.0% | |
ATTGTCTGGTTGTATGGTAT+TGG | + | chr5_3:55967752-55967771 | Msa0819490:intron | 35.0% | |
!! | TTGTACATATGTCGGTTTAG+TGG | - | chr5_3:55968204-55968223 | None:intergenic | 35.0% |
! | GGTGAATCTAGAATAGATGT+TGG | - | chr5_3:55968518-55968537 | None:intergenic | 35.0% |
TATCTTTCCCAAGAGATACT+TGG | + | chr5_3:55968767-55968786 | Msa0819490:CDS | 35.0% | |
! | AGATTTTCCAAGTTCGATGA+AGG | + | chr5_3:55968963-55968982 | Msa0819490:CDS | 35.0% |
ATATATCTTCTGCCAAAAGC+TGG | - | chr5_3:55969023-55969042 | None:intergenic | 35.0% | |
!! | TGCTGCATGCATTTTAACAA+AGG | - | chr5_3:55969093-55969112 | None:intergenic | 35.0% |
AAAACCAAGTCATATCCTAC+AGG | - | chr5_3:55969116-55969135 | None:intergenic | 35.0% | |
!!! | TGTAGGATATGACTTGGTTT+TGG | + | chr5_3:55969115-55969134 | Msa0819490:intron | 35.0% |
TGGAAATTACCAGGTCAAAA+AGG | - | chr5_3:55969151-55969170 | None:intergenic | 35.0% | |
CTATAAAACATGGGGGAATA+TGG | - | chr5_3:55969171-55969190 | None:intergenic | 35.0% | |
! | CATATTCCCCCATGTTTTAT+AGG | + | chr5_3:55969169-55969188 | Msa0819490:intron | 35.0% |
CTATAGCCTATAAAACATGG+GGG | - | chr5_3:55969178-55969197 | None:intergenic | 35.0% | |
TCAGATGCAAGAATTTGAGT+CGG | + | chr5_3:55969226-55969245 | Msa0819490:CDS | 35.0% | |
TTCAGAGAAGAGAAAAAAGG+AGG | - | chr5_3:55969350-55969369 | None:intergenic | 35.0% | |
GCATTCAGAGAAGAGAAAAA+AGG | - | chr5_3:55969353-55969372 | None:intergenic | 35.0% | |
TCTGAATGCAAGATACAATG+TGG | + | chr5_3:55969364-55969383 | Msa0819490:intron | 35.0% | |
CTGAATGCAAGATACAATGT+GGG | + | chr5_3:55969365-55969384 | Msa0819490:intron | 35.0% | |
TGAATGCAAGATACAATGTG+GGG | + | chr5_3:55969366-55969385 | Msa0819490:intron | 35.0% | |
TGTCATTCGGCAAACTAAAA+GGG | - | chr5_3:55969438-55969457 | None:intergenic | 35.0% | |
ATGTCATTCGGCAAACTAAA+AGG | - | chr5_3:55969439-55969458 | None:intergenic | 35.0% | |
! | TGGAAAAGGTGCATATCATA+TGG | + | chr5_3:55969494-55969513 | Msa0819490:CDS | 35.0% |
! | GGAAAAGGTGCATATCATAT+GGG | + | chr5_3:55969495-55969514 | Msa0819490:CDS | 35.0% |
ATAAGAGTGGAATGCATTAG+TGG | - | chr5_3:55969703-55969722 | None:intergenic | 35.0% | |
TTTGTAGCTGGAAATAAGAG+TGG | - | chr5_3:55969716-55969735 | None:intergenic | 35.0% | |
!! | AATGGATTAGTCTTTGTAGC+TGG | - | chr5_3:55969728-55969747 | None:intergenic | 35.0% |
! | TGCGGATTTTACGTAAAGAT+GGG | - | chr5_3:55969845-55969864 | None:intergenic | 35.0% |
! | TTGCGGATTTTACGTAAAGA+TGG | - | chr5_3:55969846-55969865 | None:intergenic | 35.0% |
AAAACATGCCTGATAGTTTG+CGG | - | chr5_3:55969863-55969882 | None:intergenic | 35.0% | |
TCTAATAATTCTGCAGCAGA+AGG | - | chr5_3:55969967-55969986 | None:intergenic | 35.0% | |
! | AATAAGGAGTTGATCAGTTG+TGG | + | chr5_3:55970021-55970040 | Msa0819490:CDS | 35.0% |
! | CAGTTGTGGCTTTACTATAT+CGG | + | chr5_3:55970035-55970054 | Msa0819490:CDS | 35.0% |
!! | ACTATATCGGAGGTATCATT+TGG | + | chr5_3:55970048-55970067 | Msa0819490:intron | 35.0% |
!!! | TTTTTTGATCTCATTGCAGG+TGG | + | chr5_3:55970256-55970275 | Msa0819490:intron | 35.0% |
AAATCTTAAAACACTCGAGG+TGG | + | chr5_3:55970387-55970406 | Msa0819490:three_prime_UTR | 35.0% | |
AATCTTAAAACACTCGAGGT+GGG | + | chr5_3:55970388-55970407 | Msa0819490:three_prime_UTR | 35.0% | |
! | GCTAGTTCTCCAAATATTTG+AGG | + | chr5_3:55970462-55970481 | Msa0819490:three_prime_UTR | 35.0% |
! | TCTCCAAATATTTGAGGTAG+CGG | + | chr5_3:55970468-55970487 | Msa0819490:three_prime_UTR | 35.0% |
TTTCCGCTACCTCAAATATT+TGG | - | chr5_3:55970474-55970493 | None:intergenic | 35.0% | |
! | CTGATAATTTTCTGACATGG+AGG | + | chr5_3:55970518-55970537 | Msa0819490:three_prime_UTR | 35.0% |
TACGACAACAAAATCATCGT+GGG | - | chr5_3:55970548-55970567 | None:intergenic | 35.0% | |
TTACGACAACAAAATCATCG+TGG | - | chr5_3:55970549-55970568 | None:intergenic | 35.0% | |
! | TACTGTTTAGAGCAAACATG+GGG | + | chr5_3:55970608-55970627 | Msa0819490:three_prime_UTR | 35.0% |
CTACTAATGGCAAGCATATT+AGG | + | chr5_3:55970683-55970702 | Msa0819490:three_prime_UTR | 35.0% | |
TGTGTTGAAGAGAGATTCCA+TGG | - | chr5_3:55961623-55961642 | None:intergenic | 40.0% | |
AGAGATTTGCGAAATCATCG+TGG | - | chr5_3:55961792-55961811 | None:intergenic | 40.0% | |
GAGGTCATCGGAAACTTTAA+CGG | - | chr5_3:55961845-55961864 | None:intergenic | 40.0% | |
AAACAATACCAGCCTTAGGA+CGG | - | chr5_3:55961872-55961891 | None:intergenic | 40.0% | |
GAAAAGAGAGTTGTTAGGGT+TGG | + | chr5_3:55962464-55962483 | Msa0819490:CDS | 40.0% | |
TGATTGTAGGGTTGAATGAG+AGG | + | chr5_3:55962493-55962512 | Msa0819490:CDS | 40.0% | |
GTGAAGAAAGAGTTGAAGAG+TGG | + | chr5_3:55962525-55962544 | Msa0819490:CDS | 40.0% | |
TTGAAGGTTGCGTTGAGAAT+TGG | + | chr5_3:55962582-55962601 | Msa0819490:CDS | 40.0% | |
TGAAGGTTGCGTTGAGAATT+GGG | + | chr5_3:55962583-55962602 | Msa0819490:CDS | 40.0% | |
! | TTAATCCATTAAGCACTGCC+AGG | + | chr5_3:55962694-55962713 | Msa0819490:intron | 40.0% |
!!! | CATGTTTTGATGTCGGATAC+TGG | + | chr5_3:55962781-55962800 | Msa0819490:intron | 40.0% |
! | ACTCCTTTGATCAGAAGTGT+CGG | + | chr5_3:55962806-55962825 | Msa0819490:intron | 40.0% |
! | TGGGATTTGGAATTATGCAC+TGG | + | chr5_3:55962993-55963012 | Msa0819490:intron | 40.0% |
! | GAAGGAATTGCATTTAGGGT+TGG | + | chr5_3:55963051-55963070 | Msa0819490:intron | 40.0% |
TCTGTTTCCTCTTCAAACAG+AGG | + | chr5_3:55963140-55963159 | Msa0819490:intron | 40.0% | |
!! | AGGCCAAGTACTGAGTTATT+TGG | + | chr5_3:55963160-55963179 | Msa0819490:intron | 40.0% |
ACAAAATGCTAATACCCCCA+TGG | + | chr5_3:55963185-55963204 | Msa0819490:intron | 40.0% | |
AGAAAGAACAGTATCCATGG+GGG | - | chr5_3:55963202-55963221 | None:intergenic | 40.0% | |
!! | CTTTCACTTTGCTGTTGATC+TGG | + | chr5_3:55963244-55963263 | Msa0819490:intron | 40.0% |
!! | CAAATGGTTGGTAGTGATTG+GGG | - | chr5_3:55963372-55963391 | None:intergenic | 40.0% |
!! | GCAAATGGTTGGTAGTGATT+GGG | - | chr5_3:55963373-55963392 | None:intergenic | 40.0% |
!! | TGCAAATGGTTGGTAGTGAT+TGG | - | chr5_3:55963374-55963393 | None:intergenic | 40.0% |
AAGAACAAGAACAAGCATGG+GGG | + | chr5_3:55963424-55963443 | Msa0819490:intron | 40.0% | |
CAGTTCAAATATTCTTGGCG+TGG | - | chr5_3:55963462-55963481 | None:intergenic | 40.0% | |
CACGCCAAGAATATTTGAAC+TGG | + | chr5_3:55963460-55963479 | Msa0819490:intron | 40.0% | |
GATGACCTTACCAATCACAT+TGG | + | chr5_3:55963490-55963509 | Msa0819490:intron | 40.0% | |
GGGAAGATTTCCAATGTGAT+TGG | - | chr5_3:55963503-55963522 | None:intergenic | 40.0% | |
GACAACACTGCTCAATTCAA+GGG | - | chr5_3:55963561-55963580 | None:intergenic | 40.0% | |
TGACAACACTGCTCAATTCA+AGG | - | chr5_3:55963562-55963581 | None:intergenic | 40.0% | |
TCCACCATAATCCAATAGGA+TGG | + | chr5_3:55963660-55963679 | Msa0819490:CDS | 40.0% | |
GATGCCATCCTATTGGATTA+TGG | - | chr5_3:55963667-55963686 | None:intergenic | 40.0% | |
ACTTTGTGATGCCATCCTAT+TGG | - | chr5_3:55963674-55963693 | None:intergenic | 40.0% | |
AATAGGATGGCATCACAAAG+TGG | + | chr5_3:55963673-55963692 | Msa0819490:CDS | 40.0% | |
!! | GCAGATAAGTTGGCTTCTTT+TGG | - | chr5_3:55963767-55963786 | None:intergenic | 40.0% |
GAATGATTGCGCAGATAAGT+TGG | - | chr5_3:55963777-55963796 | None:intergenic | 40.0% | |
GGTATGCAAAAAATACCAGC+AGG | + | chr5_3:55963994-55964013 | Msa0819490:intron | 40.0% | |
GAAAAAGCTGTGCGATTTGA+TGG | + | chr5_3:55964278-55964297 | Msa0819490:CDS | 40.0% | |
AAAAGCTGTGCGATTTGATG+GGG | + | chr5_3:55964280-55964299 | Msa0819490:CDS | 40.0% | |
!!! | GCAAATGGTTTTGGAAGCAA+TGG | + | chr5_3:55964364-55964383 | Msa0819490:CDS | 40.0% |
!!! | AATGGTTTTGGAAGCAATGG+AGG | + | chr5_3:55964367-55964386 | Msa0819490:CDS | 40.0% |
!! | GTGGTTGGTATTCTAGAGTA+TGG | + | chr5_3:55964492-55964511 | Msa0819490:CDS | 40.0% |
GGTTGTCCACGATTAATGAA+AGG | - | chr5_3:55964561-55964580 | None:intergenic | 40.0% | |
ACAACCTCTTTCATTTCTCG+AGG | + | chr5_3:55964575-55964594 | Msa0819490:CDS | 40.0% | |
GATTCCTCGAGAAATGAAAG+AGG | - | chr5_3:55964582-55964601 | None:intergenic | 40.0% | |
AAGCAATAAAACCTTCCCTG+GGG | - | chr5_3:55964727-55964746 | None:intergenic | 40.0% | |
CAAGCAATAAAACCTTCCCT+GGG | - | chr5_3:55964728-55964747 | None:intergenic | 40.0% | |
ACAAGCAATAAAACCTTCCC+TGG | - | chr5_3:55964729-55964748 | None:intergenic | 40.0% | |
! | CATTTTGCAGCTTGAGCATT+TGG | + | chr5_3:55965061-55965080 | Msa0819490:intron | 40.0% |
TTTGCTTCCAGAACAGTTCT+TGG | + | chr5_3:55965141-55965160 | Msa0819490:CDS | 40.0% | |
! | AGTTCTTGGATCCGATGTTT+TGG | + | chr5_3:55965155-55965174 | Msa0819490:CDS | 40.0% |
!! | GATGTTTTGGACGTTTGACA+TGG | + | chr5_3:55965168-55965187 | Msa0819490:CDS | 40.0% |
CAGGGATTGACTAATCAAAC+AGG | - | chr5_3:55965443-55965462 | None:intergenic | 40.0% | |
CACTCAAGATGTCTGATTTC+AGG | + | chr5_3:55965596-55965615 | Msa0819490:intron | 40.0% | |
!!! | GGTAGTTTTGATGCATCTGT+TGG | - | chr5_3:55965627-55965646 | None:intergenic | 40.0% |
CTGTTATCCTTGTCATCTGA+TGG | - | chr5_3:55965720-55965739 | None:intergenic | 40.0% | |
GAATGGAAAAGTCACATTGC+AGG | - | chr5_3:55965827-55965846 | None:intergenic | 40.0% | |
AATCAAATCTACCACATGGC+TGG | - | chr5_3:55965990-55966009 | None:intergenic | 40.0% | |
AAATCGAAATCTTGAGGCAG+TGG | + | chr5_3:55966262-55966281 | Msa0819490:intron | 40.0% | |
! | ACATTGGTGTCTACCATTCA+CGG | - | chr5_3:55966302-55966321 | None:intergenic | 40.0% |
TACAACAGTATACACACTGC+CGG | + | chr5_3:55966354-55966373 | Msa0819490:intron | 40.0% | |
CCAAAATTAAGACCTCTGCT+TGG | - | chr5_3:55966387-55966406 | None:intergenic | 40.0% | |
! | CCAAGCAGAGGTCTTAATTT+TGG | + | chr5_3:55966384-55966403 | Msa0819490:intron | 40.0% |
TTTGACTAGGTCACAAAGGA+GGG | - | chr5_3:55966572-55966591 | None:intergenic | 40.0% | |
!! | TTTTGACTAGGTCACAAAGG+AGG | - | chr5_3:55966573-55966592 | None:intergenic | 40.0% |
TAAAAGGGGATCTCGGTAAA+GGG | - | chr5_3:55966687-55966706 | None:intergenic | 40.0% | |
TTAAAAGGGGATCTCGGTAA+AGG | - | chr5_3:55966688-55966707 | None:intergenic | 40.0% | |
CGAGCTGAGTATGTTAAAAG+GGG | - | chr5_3:55966701-55966720 | None:intergenic | 40.0% | |
GCGAGCTGAGTATGTTAAAA+GGG | - | chr5_3:55966702-55966721 | None:intergenic | 40.0% | |
!! | CTCATGTGACTCTGGAATAT+TGG | + | chr5_3:55966778-55966797 | Msa0819490:intron | 40.0% |
GGTCCAACTATCATTACACT+TGG | + | chr5_3:55966887-55966906 | Msa0819490:intron | 40.0% | |
ATTACCATGAAACTGCTGCT+CGG | + | chr5_3:55966951-55966970 | Msa0819490:intron | 40.0% | |
!! | AGTATGCTTAAAGAGTGCCT+CGG | - | chr5_3:55967178-55967197 | None:intergenic | 40.0% |
GAGTTGCATTGTCTTTGCTT+AGG | + | chr5_3:55967774-55967793 | Msa0819490:intron | 40.0% | |
CAAGAGTTCAGATGCTAAAG+TGG | + | chr5_3:55968081-55968100 | Msa0819490:intron | 40.0% | |
TAACAGTTAACAGAACGTGC+TGG | + | chr5_3:55968113-55968132 | Msa0819490:intron | 40.0% | |
AACAGTTAACAGAACGTGCT+GGG | + | chr5_3:55968114-55968133 | Msa0819490:intron | 40.0% | |
CGGTTTAGTGGCCAATTATA+TGG | - | chr5_3:55968192-55968211 | None:intergenic | 40.0% | |
TAGCAACTCTTGTAGATGAC+AGG | - | chr5_3:55968327-55968346 | None:intergenic | 40.0% | |
GTCATCTACAAGAGTTGCTA+TGG | + | chr5_3:55968327-55968346 | Msa0819490:CDS | 40.0% | |
TGCGAATCCAAGTATCTCTT+GGG | - | chr5_3:55968777-55968796 | None:intergenic | 40.0% | |
ATGCGAATCCAAGTATCTCT+TGG | - | chr5_3:55968778-55968797 | None:intergenic | 40.0% | |
GATACTTGGATTCGCATTTG+AGG | + | chr5_3:55968781-55968800 | Msa0819490:CDS | 40.0% | |
ACCAGGTAGGGGAAAAAAAA+CGG | - | chr5_3:55968815-55968834 | None:intergenic | 40.0% | |
CTAAAGAAGATACCAGGTAG+GGG | - | chr5_3:55968826-55968845 | None:intergenic | 40.0% | |
GCTAAAGAAGATACCAGGTA+GGG | - | chr5_3:55968827-55968846 | None:intergenic | 40.0% | |
TGCTAAAGAAGATACCAGGT+AGG | - | chr5_3:55968828-55968847 | None:intergenic | 40.0% | |
ACCTGGTATCTTCTTTAGCA+TGG | + | chr5_3:55968828-55968847 | Msa0819490:intron | 40.0% | |
CCTGGTATCTTCTTTAGCAT+GGG | + | chr5_3:55968829-55968848 | Msa0819490:intron | 40.0% | |
CTGGTATCTTCTTTAGCATG+GGG | + | chr5_3:55968830-55968849 | Msa0819490:intron | 40.0% | |
! | TAGGCTATAGATAGTGCTGA+TGG | + | chr5_3:55969188-55969207 | Msa0819490:intron | 40.0% |
!! | GGCTAAATTCAGCATTGATC+AGG | + | chr5_3:55969247-55969266 | Msa0819490:CDS | 40.0% |
GCAAACTATGGGACAACAAA+TGG | - | chr5_3:55969313-55969332 | None:intergenic | 40.0% | |
TTATTTGAGTCCTTGGTCAC+TGG | + | chr5_3:55969771-55969790 | Msa0819490:CDS | 40.0% | |
CGTAAAATCCGCAAACTATC+AGG | + | chr5_3:55969852-55969871 | Msa0819490:CDS | 40.0% | |
TTTATGTAGACACTGTTGGC+CGG | + | chr5_3:55969899-55969918 | Msa0819490:intron | 40.0% | |
ATTCTCCCAAGATCCTGTAA+TGG | - | chr5_3:55970004-55970023 | None:intergenic | 40.0% | |
TACAGGATCTTGGGAGAATA+AGG | + | chr5_3:55970005-55970024 | Msa0819490:CDS | 40.0% | |
! | TTGTGGCTTTACTATATCGG+AGG | + | chr5_3:55970038-55970057 | Msa0819490:CDS | 40.0% |
!! | AGAATCATTGGTAATGTGGC+TGG | - | chr5_3:55970141-55970160 | None:intergenic | 40.0% |
GGAGAATGCATGTGAAGAAA+AGG | - | chr5_3:55970213-55970232 | None:intergenic | 40.0% | |
ATCTTAAAACACTCGAGGTG+GGG | + | chr5_3:55970389-55970408 | Msa0819490:three_prime_UTR | 40.0% | |
!!! | TAACATGTTTTAGCCTCGGA+GGG | - | chr5_3:55970436-55970455 | None:intergenic | 40.0% |
ACGACAACAAAATCATCGTG+GGG | - | chr5_3:55970547-55970566 | None:intergenic | 40.0% | |
! | TTTAGAGCAAACATGGGGAT+GGG | + | chr5_3:55970613-55970632 | Msa0819490:three_prime_UTR | 40.0% |
ATATGTTATGCCTACCAGTG+AGG | + | chr5_3:55970717-55970736 | Msa0819490:three_prime_UTR | 40.0% | |
CTAAAAATAGCCTCACTGGT+AGG | - | chr5_3:55970730-55970749 | None:intergenic | 40.0% | |
GGATCTAAAAATAGCCTCAC+TGG | - | chr5_3:55970734-55970753 | None:intergenic | 40.0% | |
GAAGTTGTGGAGGAGATGAA+GGG | + | chr5_3:55962420-55962439 | Msa0819490:CDS | 45.0% | |
AAGTTGTGGAGGAGATGAAG+GGG | + | chr5_3:55962421-55962440 | Msa0819490:CDS | 45.0% | |
AAGAGAGTTGTTAGGGTTGG+TGG | + | chr5_3:55962467-55962486 | Msa0819490:CDS | 45.0% | |
! | AGAGAGTTGTTAGGGTTGGT+GGG | + | chr5_3:55962468-55962487 | Msa0819490:CDS | 45.0% |
TGTAGGGTTGAATGAGAGGT+TGG | + | chr5_3:55962497-55962516 | Msa0819490:CDS | 45.0% | |
GTTGAAGAGTGGGAAGTTGA+AGG | + | chr5_3:55962536-55962555 | Msa0819490:CDS | 45.0% | |
GAAGGTTGCGTTGAGAATTG+GGG | + | chr5_3:55962584-55962603 | Msa0819490:CDS | 45.0% | |
CTCAACAACCCATACACCAA+CGG | - | chr5_3:55962627-55962646 | None:intergenic | 45.0% | |
!! | ATGGTCTCAGTGCTTTGAAG+AGG | + | chr5_3:55962653-55962672 | Msa0819490:CDS | 45.0% |
ACACTCTGACACGTTAACAC+CGG | + | chr5_3:55962721-55962740 | Msa0819490:intron | 45.0% | |
TACTTGGCCTCTGTTTGAAG+AGG | - | chr5_3:55963150-55963169 | None:intergenic | 45.0% | |
ACAGGTATGCTGCAAATGGT+TGG | - | chr5_3:55963384-55963403 | None:intergenic | 45.0% | |
GTGTTGTCAAATATCCGCCA+TGG | + | chr5_3:55963573-55963592 | Msa0819490:CDS | 45.0% | |
! | AGATATCTGTGGCGGCTTTT+GGG | + | chr5_3:55963597-55963616 | Msa0819490:CDS | 45.0% |
ACACCCAATATCAGCCGATA+CGG | + | chr5_3:55963629-55963648 | Msa0819490:CDS | 45.0% | |
GCCATCCTATTGGATTATGG+TGG | - | chr5_3:55963664-55963683 | None:intergenic | 45.0% | |
TGGCCAGTATGGCAGTATAT+CGG | + | chr5_3:55963693-55963712 | Msa0819490:intron | 45.0% | |
! | AGTATATCGGTGCTCCGAAA+TGG | + | chr5_3:55963706-55963725 | Msa0819490:intron | 45.0% |
GTTCAATCCAGTGTTCTCGA+TGG | - | chr5_3:55963743-55963762 | None:intergenic | 45.0% | |
CAAGGGAGAAGGTAGATTGA+TGG | - | chr5_3:55964036-55964055 | None:intergenic | 45.0% | |
TACCTTCTCCCTTGAAGTTC+TGG | + | chr5_3:55964042-55964061 | Msa0819490:intron | 45.0% | |
ACATCACGCCAGAACTTCAA+GGG | - | chr5_3:55964053-55964072 | None:intergenic | 45.0% | |
TACATCACGCCAGAACTTCA+AGG | - | chr5_3:55964054-55964073 | None:intergenic | 45.0% | |
AGAGGTCCTCGTGAAGTTTA+TGG | + | chr5_3:55964256-55964275 | Msa0819490:CDS | 45.0% | |
GAGTGGGATTCAGTTGCAAA+TGG | + | chr5_3:55964349-55964368 | Msa0819490:CDS | 45.0% | |
AGCAATAAAACCTTCCCTGG+GGG | - | chr5_3:55964726-55964745 | None:intergenic | 45.0% | |
TTGCAGCTTGAGCATTTGGA+TGG | + | chr5_3:55965065-55965084 | Msa0819490:intron | 45.0% | |
TGCAGCTTGAGCATTTGGAT+GGG | + | chr5_3:55965066-55965085 | Msa0819490:intron | 45.0% | |
ATGGGGAGCTTCTGTATTCA+GGG | + | chr5_3:55965084-55965103 | Msa0819490:CDS | 45.0% | |
ATCGGATCCAAGAACTGTTC+TGG | - | chr5_3:55965151-55965170 | None:intergenic | 45.0% | |
CATTTCGCCATCAGATGACA+AGG | + | chr5_3:55965710-55965729 | Msa0819490:CDS | 45.0% | |
GTGAAAACTCACTTGGGGAA+TGG | - | chr5_3:55965844-55965863 | None:intergenic | 45.0% | |
CATCAATTGCTTGGCTGCTT+TGG | - | chr5_3:55966038-55966057 | None:intergenic | 45.0% | |
CAAAGCAGCCAAGCAATTGA+TGG | + | chr5_3:55966036-55966055 | Msa0819490:CDS | 45.0% | |
CACTGACAATGATCCGTGAA+TGG | + | chr5_3:55966286-55966305 | Msa0819490:intron | 45.0% | |
ACCTCTGCTTGGTATATCAC+CGG | - | chr5_3:55966376-55966395 | None:intergenic | 45.0% | |
!! | GACCTTGTAAGAAGTGCCAA+TGG | + | chr5_3:55966467-55966486 | Msa0819490:intron | 45.0% |
AGCCATTGGCACTTCTTACA+AGG | - | chr5_3:55966472-55966491 | None:intergenic | 45.0% | |
!! | TAAGAAGTGCCAATGGCTCT+GGG | + | chr5_3:55966474-55966493 | Msa0819490:intron | 45.0% |
AAGGTTAATCCCAGAGCCAT+TGG | - | chr5_3:55966486-55966505 | None:intergenic | 45.0% | |
!! | AATGGCTCTGGGATTAACCT+TGG | + | chr5_3:55966485-55966504 | Msa0819490:intron | 45.0% |
TTGACTAGGTCACAAAGGAG+GGG | - | chr5_3:55966571-55966590 | None:intergenic | 45.0% | |
ATGTGTTTCCTATGGGGACT+TGG | + | chr5_3:55966597-55966616 | Msa0819490:intron | 45.0% | |
GGCGAGCTGAGTATGTTAAA+AGG | - | chr5_3:55966703-55966722 | None:intergenic | 45.0% | |
!! | TATGCTTAAAGAGTGCCTCG+GGG | - | chr5_3:55967176-55967195 | None:intergenic | 45.0% |
!! | GTATGCTTAAAGAGTGCCTC+GGG | - | chr5_3:55967177-55967196 | None:intergenic | 45.0% |
AAGGTCTTTAACCATTGCCC+CGG | + | chr5_3:55967258-55967277 | Msa0819490:intron | 45.0% | |
AAATGTTAACTAGTGCCCCC+GGG | - | chr5_3:55967279-55967298 | None:intergenic | 45.0% | |
GAAATGTTAACTAGTGCCCC+CGG | - | chr5_3:55967280-55967299 | None:intergenic | 45.0% | |
! | TGCATGGACTAACCTTGACA+GGG | - | chr5_3:55968402-55968421 | None:intergenic | 45.0% |
! | TTGCATGGACTAACCTTGAC+AGG | - | chr5_3:55968403-55968422 | None:intergenic | 45.0% |
! | CAAGGTTAGTCCATGCAAGA+CGG | + | chr5_3:55968405-55968424 | Msa0819490:intron | 45.0% |
CAATATGTCACCGTCTTGCA+TGG | - | chr5_3:55968418-55968437 | None:intergenic | 45.0% | |
CATGCAAGACGGTGACATAT+TGG | + | chr5_3:55968416-55968435 | Msa0819490:intron | 45.0% | |
AAACAGCGAAAGGACGTGAA+TGG | - | chr5_3:55968539-55968558 | None:intergenic | 45.0% | |
!!! | TCCGTTTTTTTTCCCCTACC+TGG | + | chr5_3:55968811-55968830 | Msa0819490:intron | 45.0% |
CCCATGCTAAAGAAGATACC+AGG | - | chr5_3:55968832-55968851 | None:intergenic | 45.0% | |
ATCCAAATGCGTGAGACAAG+GGG | - | chr5_3:55968922-55968941 | None:intergenic | 45.0% | |
CATCCAAATGCGTGAGACAA+GGG | - | chr5_3:55968923-55968942 | None:intergenic | 45.0% | |
! | GCATGCTGTGTTTGCTGATT+TGG | + | chr5_3:55968987-55969006 | Msa0819490:CDS | 45.0% |
TCTGCCAAAAGCTGGAATCT+TGG | - | chr5_3:55969015-55969034 | None:intergenic | 45.0% | |
AAAATGCATGCAGCACCTGT+AGG | + | chr5_3:55969098-55969117 | Msa0819490:intron | 45.0% | |
AGCACCTGTAGGATATGACT+TGG | + | chr5_3:55969109-55969128 | Msa0819490:intron | 45.0% | |
! | TGACACTTGCCTTTTTGACC+TGG | + | chr5_3:55969139-55969158 | Msa0819490:intron | 45.0% |
GGGGGAATATGGAAATTACC+AGG | - | chr5_3:55969160-55969179 | None:intergenic | 45.0% | |
! | TGATCAGGTTGTCTTCAGTC+TGG | + | chr5_3:55969474-55969493 | Msa0819490:intron | 45.0% |
GGTTGTCTTCAGTCTGGAAA+AGG | + | chr5_3:55969480-55969499 | Msa0819490:intron | 45.0% | |
AGCTGCAGAAGAGACTTTAC+AGG | + | chr5_3:55969618-55969637 | Msa0819490:CDS | 45.0% | |
ATTTGGATCACCAGTGACCA+AGG | - | chr5_3:55969784-55969803 | None:intergenic | 45.0% | |
GCAGGGAACTCACTCAAATT+TGG | - | chr5_3:55969801-55969820 | None:intergenic | 45.0% | |
AATTTGAGTGAGTTCCCTGC+AGG | + | chr5_3:55969801-55969820 | Msa0819490:CDS | 45.0% | |
ATTTGAGTGAGTTCCCTGCA+GGG | + | chr5_3:55969802-55969821 | Msa0819490:CDS | 45.0% | |
ATTAGATGATGATCCCTCCG+AGG | + | chr5_3:55970420-55970439 | Msa0819490:three_prime_UTR | 45.0% | |
!!! | CTAACATGTTTTAGCCTCGG+AGG | - | chr5_3:55970437-55970456 | None:intergenic | 45.0% |
! | GTTTAGAGCAAACATGGGGA+TGG | + | chr5_3:55970612-55970631 | Msa0819490:three_prime_UTR | 45.0% |
!! | GAGGGGTGGTGGTTTTTGTT+TGG | - | chr5_3:55961578-55961597 | None:intergenic | 50.0% |
AGAGAGATTCCATGGAGCGA+CGG | - | chr5_3:55961615-55961634 | None:intergenic | 50.0% | |
TTGGTCGGAGAGATCTTGTG+CGG | - | chr5_3:55961668-55961687 | None:intergenic | 50.0% | |
GGATCGGATCTGGTGAGAAT+GGG | - | chr5_3:55961743-55961762 | None:intergenic | 50.0% | |
ATTGGACTTGGGATCGGATC+TGG | - | chr5_3:55961753-55961772 | None:intergenic | 50.0% | |
GGTAGGATTGGACTTGGGAT+CGG | - | chr5_3:55961759-55961778 | None:intergenic | 50.0% | |
TGCGAAATCATCGTGGTGAG+AGG | - | chr5_3:55961785-55961804 | None:intergenic | 50.0% | |
TTATCAGGTCTCAGAGCGAC+CGG | + | chr5_3:55962380-55962399 | Msa0819490:intron | 50.0% | |
GGAAGTTGTGGAGGAGATGA+AGG | + | chr5_3:55962419-55962438 | Msa0819490:CDS | 50.0% | |
!! | GGTTGGTGGGAGTGATTGTA+GGG | + | chr5_3:55962481-55962500 | Msa0819490:CDS | 50.0% |
TGGGAAGTTGAAGGTTGCTG+CGG | + | chr5_3:55962545-55962564 | Msa0819490:CDS | 50.0% | |
AAGTTGAAGGTTGCTGCGGA+AGG | + | chr5_3:55962549-55962568 | Msa0819490:CDS | 50.0% | |
AGTTGAAGGTTGCTGCGGAA+GGG | + | chr5_3:55962550-55962569 | Msa0819490:CDS | 50.0% | |
GGAAGGGTTGAAGGAGTTGA+AGG | + | chr5_3:55962566-55962585 | Msa0819490:CDS | 50.0% | |
ATCGAGAGCCGTTGGTGTAT+GGG | + | chr5_3:55962616-55962635 | Msa0819490:CDS | 50.0% | |
! | GCACCGACACTTCTGATCAA+AGG | - | chr5_3:55962812-55962831 | None:intergenic | 50.0% |
!! | CAGAAGTGTCGGTGCTACAT+AGG | + | chr5_3:55962817-55962836 | Msa0819490:intron | 50.0% |
! | GATTGGGGTGCCTACTTAGT+TGG | - | chr5_3:55963357-55963376 | None:intergenic | 50.0% |
! | CAGATATCTGTGGCGGCTTT+TGG | + | chr5_3:55963596-55963615 | Msa0819490:CDS | 50.0% |
!! | GTATCGGCTGATATTGGGTG+TGG | - | chr5_3:55963630-55963649 | None:intergenic | 50.0% |
!! | TCGCCGTATCGGCTGATATT+GGG | - | chr5_3:55963635-55963654 | None:intergenic | 50.0% |
GGTGGAAATTCTCGCCGTAT+CGG | - | chr5_3:55963646-55963665 | None:intergenic | 50.0% | |
GCATCACAAAGTGGCCAGTA+TGG | + | chr5_3:55963682-55963701 | Msa0819490:CDS | 50.0% | |
! | GCACCGATATACTGCCATAC+TGG | - | chr5_3:55963699-55963718 | None:intergenic | 50.0% |
TGGCGAATGGCGTTCCATTT+CGG | - | chr5_3:55963723-55963742 | None:intergenic | 50.0% | |
ATTGTGTAGGGAACTCGTGC+AGG | + | chr5_3:55963835-55963854 | Msa0819490:intron | 50.0% | |
TTGTGTAGGGAACTCGTGCA+GGG | + | chr5_3:55963836-55963855 | Msa0819490:intron | 50.0% | |
! | TTTGGGAAGCATAGTGCTGC+TGG | - | chr5_3:55963867-55963886 | None:intergenic | 50.0% |
GCAAAAAATACCAGCAGGGC+TGG | + | chr5_3:55963999-55964018 | Msa0819490:intron | 50.0% | |
AATAAAACCTTCCCTGGGGG+TGG | - | chr5_3:55964723-55964742 | None:intergenic | 50.0% | |
!!! | GAGGTTTTCTGAGGTCACCT+AGG | + | chr5_3:55964992-55965011 | Msa0819490:intron | 50.0% |
GCAGCTTGAGCATTTGGATG+GGG | + | chr5_3:55965067-55965086 | Msa0819490:intron | 50.0% | |
GATGGGGAGCTTCTGTATTC+AGG | + | chr5_3:55965083-55965102 | Msa0819490:CDS | 50.0% | |
TTGGACGTTTGACATGGCCT+AGG | + | chr5_3:55965174-55965193 | Msa0819490:CDS | 50.0% | |
! | CTGCAGGAGTATACAAGGGA+TGG | + | chr5_3:55965926-55965945 | Msa0819490:intron | 50.0% |
TATCCTGTCATCCAGCCATG+TGG | + | chr5_3:55965976-55965995 | Msa0819490:CDS | 50.0% | |
!! | GTAAGAAGTGCCAATGGCTC+TGG | + | chr5_3:55966473-55966492 | Msa0819490:intron | 50.0% |
! | TCTGGGATTAACCTTGGACG+TGG | + | chr5_3:55966491-55966510 | Msa0819490:intron | 50.0% |
CTGGGATTAACCTTGGACGT+GGG | + | chr5_3:55966492-55966511 | Msa0819490:intron | 50.0% | |
ATTCCAGGAAAAGGGGGATC+TGG | - | chr5_3:55966521-55966540 | None:intergenic | 50.0% | |
TGCCACGATTCCAGGAAAAG+GGG | - | chr5_3:55966528-55966547 | None:intergenic | 50.0% | |
CTGCCACGATTCCAGGAAAA+GGG | - | chr5_3:55966529-55966548 | None:intergenic | 50.0% | |
TGACTAGGTCACAAAGGAGG+GGG | - | chr5_3:55966570-55966589 | None:intergenic | 50.0% | |
CGGATAAGGGTAGCTGAAAC+CGG | + | chr5_3:55966651-55966670 | Msa0819490:intron | 50.0% | |
GGATCTCGGTAAAGGGTCAT+TGG | - | chr5_3:55966680-55966699 | None:intergenic | 50.0% | |
ACGTGTCTCTCATGTGACTC+TGG | + | chr5_3:55966770-55966789 | Msa0819490:intron | 50.0% | |
!! | ATGCTTAAAGAGTGCCTCGG+GGG | - | chr5_3:55967175-55967194 | None:intergenic | 50.0% |
AGGTCTTTAACCATTGCCCC+GGG | + | chr5_3:55967259-55967278 | Msa0819490:intron | 50.0% | |
AATGTTAACTAGTGCCCCCG+GGG | - | chr5_3:55967278-55967297 | None:intergenic | 50.0% | |
CGAAGTAGTAGTCCCTGTCA+AGG | + | chr5_3:55968387-55968406 | Msa0819490:CDS | 50.0% | |
GTGAAGCTAGAAAGGCAGCT+TGG | + | chr5_3:55968701-55968720 | Msa0819490:intron | 50.0% | |
AAGCTAGAAAGGCAGCTTGG+CGG | + | chr5_3:55968704-55968723 | Msa0819490:intron | 50.0% | |
TTCCCCTTGTCTCACGCATT+TGG | + | chr5_3:55968917-55968936 | Msa0819490:intron | 50.0% | |
GCATCCAAATGCGTGAGACA+AGG | - | chr5_3:55968924-55968943 | None:intergenic | 50.0% | |
GCATGCTCCTTCATCGAACT+TGG | - | chr5_3:55968973-55968992 | None:intergenic | 50.0% | |
! | GGCTCCAAGATTCCAGCTTT+TGG | + | chr5_3:55969008-55969027 | Msa0819490:CDS | 50.0% |
GATCTTCAAGAGACCCTGCA+GGG | - | chr5_3:55969818-55969837 | None:intergenic | 50.0% | |
AGATCTTCAAGAGACCCTGC+AGG | - | chr5_3:55969819-55969838 | None:intergenic | 50.0% | |
AGCAAACATGGGGATGGGAT+TGG | + | chr5_3:55970618-55970637 | Msa0819490:three_prime_UTR | 50.0% | |
GCAAACATGGGGATGGGATT+GGG | + | chr5_3:55970619-55970638 | Msa0819490:three_prime_UTR | 50.0% | |
CAAACATGGGGATGGGATTG+GGG | + | chr5_3:55970620-55970639 | Msa0819490:three_prime_UTR | 50.0% | |
ACGGTGGAGAGAGTGATCGA+GGG | - | chr5_3:55961596-55961615 | None:intergenic | 55.0% | |
!! | GGAGAGAGGGGAGTTTTGGT+CGG | - | chr5_3:55961683-55961702 | None:intergenic | 55.0% |
TCGATGAGAAGGCGGAGATC+GGG | - | chr5_3:55961709-55961728 | None:intergenic | 55.0% | |
GTCGATGAGAAGGCGGAGAT+CGG | - | chr5_3:55961710-55961729 | None:intergenic | 55.0% | |
GGGATCGGATCTGGTGAGAA+TGG | - | chr5_3:55961744-55961763 | None:intergenic | 55.0% | |
GGCGAGGTAGGATTGGACTT+GGG | - | chr5_3:55961764-55961783 | None:intergenic | 55.0% | |
AGGCGAGGTAGGATTGGACT+TGG | - | chr5_3:55961765-55961784 | None:intergenic | 55.0% | |
AATCATCGTGGTGAGAGGCG+AGG | - | chr5_3:55961780-55961799 | None:intergenic | 55.0% | |
TGAAACGGCGTCGTTGCAGA+GGG | - | chr5_3:55961818-55961837 | None:intergenic | 55.0% | |
! | TAGGACGGTGTCGAGGTCAT+CGG | - | chr5_3:55961857-55961876 | None:intergenic | 55.0% |
ATGACCTCGACACCGTCCTA+AGG | + | chr5_3:55961857-55961876 | Msa0819490:CDS | 55.0% | |
TGTGGAGGTGAGGGAAGTTG+TGG | + | chr5_3:55962407-55962426 | Msa0819490:CDS | 55.0% | |
GGAGATGAAGGGGAAGAGTG+AGG | + | chr5_3:55962431-55962450 | Msa0819490:CDS | 55.0% | |
GGGGAAGAGTGAGGAGTTGA+AGG | + | chr5_3:55962440-55962459 | Msa0819490:CDS | 55.0% | |
!! | GGGTTGGTGGGAGTGATTGT+AGG | + | chr5_3:55962480-55962499 | Msa0819490:CDS | 55.0% |
GGTTGCGTTGAGAATTGGGG+AGG | + | chr5_3:55962587-55962606 | Msa0819490:CDS | 55.0% | |
GGAAGATGATCGAGAGCCGT+TGG | + | chr5_3:55962608-55962627 | Msa0819490:CDS | 55.0% | |
GATCGAGAGCCGTTGGTGTA+TGG | + | chr5_3:55962615-55962634 | Msa0819490:CDS | 55.0% | |
TCGTGCCTGGCAGTGCTTAA+TGG | - | chr5_3:55962702-55962721 | None:intergenic | 55.0% | |
TCCGCCATGGCAGATATCTG+TGG | + | chr5_3:55963586-55963605 | Msa0819490:CDS | 55.0% | |
GCCACAGATATCTGCCATGG+CGG | - | chr5_3:55963590-55963609 | None:intergenic | 55.0% | |
GCCATGGCAGATATCTGTGG+CGG | + | chr5_3:55963589-55963608 | Msa0819490:CDS | 55.0% | |
!! | CTCGCCGTATCGGCTGATAT+TGG | - | chr5_3:55963636-55963655 | None:intergenic | 55.0% |
CCAGTGTTCTCGATGGCGAA+TGG | - | chr5_3:55963736-55963755 | None:intergenic | 55.0% | |
CCATTCGCCATCGAGAACAC+TGG | + | chr5_3:55963733-55963752 | Msa0819490:intron | 55.0% | |
CGCCAGAACTTCAAGGGAGA+AGG | - | chr5_3:55964047-55964066 | None:intergenic | 55.0% | |
TTATGACACAGACCACCCCC+AGG | + | chr5_3:55964708-55964727 | Msa0819490:intron | 55.0% | |
TATGACACAGACCACCCCCA+GGG | + | chr5_3:55964709-55964728 | Msa0819490:intron | 55.0% | |
CTACCACATGGCTGGATGAC+AGG | - | chr5_3:55965982-55966001 | None:intergenic | 55.0% | |
GCCGGTGATATACCAAGCAG+AGG | + | chr5_3:55966372-55966391 | Msa0819490:intron | 55.0% | |
! | TCCCCCTTTTCCTGGAATCG+TGG | + | chr5_3:55966523-55966542 | Msa0819490:intron | 55.0% |
GCCACGATTCCAGGAAAAGG+GGG | - | chr5_3:55966527-55966546 | None:intergenic | 55.0% | |
CCTGCCACGATTCCAGGAAA+AGG | - | chr5_3:55966530-55966549 | None:intergenic | 55.0% | |
! | CCTTTTCCTGGAATCGTGGC+AGG | + | chr5_3:55966527-55966546 | Msa0819490:intron | 55.0% |
TTTCCTGGAATCGTGGCAGG+TGG | + | chr5_3:55966530-55966549 | Msa0819490:intron | 55.0% | |
CACTCTGACCAAGTCCCCAT+AGG | - | chr5_3:55966608-55966627 | None:intergenic | 55.0% | |
GGTAAAGGGTCATTGGCAGC+CGG | - | chr5_3:55966673-55966692 | None:intergenic | 55.0% | |
TTACAGGCCTCGTGCTTGAG+GGG | - | chr5_3:55966830-55966849 | None:intergenic | 55.0% | |
CTTACAGGCCTCGTGCTTGA+GGG | - | chr5_3:55966831-55966850 | None:intergenic | 55.0% | |
CTCAAGCACGAGGCCTGTAA+GGG | + | chr5_3:55966830-55966849 | Msa0819490:intron | 55.0% | |
TGGTCCGAGCAGCAGTTTCA+TGG | - | chr5_3:55966958-55966977 | None:intergenic | 55.0% | |
!! | CTTATTAAGGAGTGCCCCCG+AGG | + | chr5_3:55967158-55967177 | Msa0819490:intron | 55.0% |
GGTCTTTAACCATTGCCCCG+GGG | + | chr5_3:55967260-55967279 | Msa0819490:intron | 55.0% | |
GTCTTTAACCATTGCCCCGG+GGG | + | chr5_3:55967261-55967280 | Msa0819490:intron | 55.0% | |
AGAGAGTGATCGAGGGGTGG+TGG | - | chr5_3:55961589-55961608 | None:intergenic | 60.0% | |
TGGAGAGAGTGATCGAGGGG+TGG | - | chr5_3:55961592-55961611 | None:intergenic | 60.0% | |
CGGTGGAGAGAGTGATCGAG+GGG | - | chr5_3:55961595-55961614 | None:intergenic | 60.0% | |
GACGGTGGAGAGAGTGATCG+AGG | - | chr5_3:55961597-55961616 | None:intergenic | 60.0% | |
GAGATTCCATGGAGCGACGG+TGG | - | chr5_3:55961612-55961631 | None:intergenic | 60.0% | |
GATGAGAAGGCGGAGATCGG+GGG | - | chr5_3:55961707-55961726 | None:intergenic | 60.0% | |
CGATGAGAAGGCGGAGATCG+GGG | - | chr5_3:55961708-55961727 | None:intergenic | 60.0% | |
AGTCGACGCGGTCGATGAGA+AGG | - | chr5_3:55961720-55961739 | None:intergenic | 60.0% | |
GGTGAGAATGGGAGTCGACG+CGG | - | chr5_3:55961732-55961751 | None:intergenic | 60.0% | |
GGTGAGAGGCGAGGTAGGAT+TGG | - | chr5_3:55961771-55961790 | None:intergenic | 60.0% | |
ATCGTGGTGAGAGGCGAGGT+AGG | - | chr5_3:55961776-55961795 | None:intergenic | 60.0% | |
GTGAAACGGCGTCGTTGCAG+AGG | - | chr5_3:55961819-55961838 | None:intergenic | 60.0% | |
GGAGGTGAGGGAAGTTGTGG+AGG | + | chr5_3:55962410-55962429 | Msa0819490:CDS | 60.0% | |
GGTTGCTGCGGAAGGGTTGA+AGG | + | chr5_3:55962557-55962576 | Msa0819490:CDS | 60.0% | |
!! | ACGTGTCAGAGTGTCGTGCC+TGG | - | chr5_3:55962715-55962734 | None:intergenic | 60.0% |
GCCGCCACAGATATCTGCCA+TGG | - | chr5_3:55963593-55963612 | None:intergenic | 60.0% | |
TAAGGGGATTCCAGCCCTGC+TGG | - | chr5_3:55964012-55964031 | None:intergenic | 60.0% | |
! | CTGCCAGATCCCCCTTTTCC+TGG | + | chr5_3:55966515-55966534 | Msa0819490:intron | 60.0% |
AGACCACCTGCCACGATTCC+AGG | - | chr5_3:55966536-55966555 | None:intergenic | 60.0% | |
GTCACAAAGGAGGGGGAGCT+CGG | - | chr5_3:55966563-55966582 | None:intergenic | 60.0% | |
AGACGAACTGGCCACGTGCT+CGG | - | chr5_3:55966732-55966751 | None:intergenic | 60.0% | |
CCTTACAGGCCTCGTGCTTG+AGG | - | chr5_3:55966832-55966851 | None:intergenic | 60.0% | |
CCTCAAGCACGAGGCCTGTA+AGG | + | chr5_3:55966829-55966848 | Msa0819490:intron | 60.0% | |
CTCTCTCCACCGTCGCTCCA+TGG | + | chr5_3:55961603-55961622 | Msa0819490:exon | 65.0% | |
! | GGGCGGAGAGAGGGGAGTTT+TGG | - | chr5_3:55961687-55961706 | None:intergenic | 65.0% |
CGACGCGGTCGATGAGAAGG+CGG | - | chr5_3:55961717-55961736 | None:intergenic | 65.0% | |
! | CCAGCCTTAGGACGGTGTCG+AGG | - | chr5_3:55961864-55961883 | None:intergenic | 65.0% |
CCTCGACACCGTCCTAAGGC+TGG | + | chr5_3:55961861-55961880 | Msa0819490:CDS | 65.0% | |
TCAGGTCTCAGAGCGACCGG+CGG | + | chr5_3:55962383-55962402 | Msa0819490:intron | 65.0% | |
ACCGGCGGATGTGGAGGTGA+GGG | + | chr5_3:55962398-55962417 | Msa0819490:CDS | 65.0% | |
TCCCTCACCTCCACATCCGC+CGG | - | chr5_3:55962402-55962421 | None:intergenic | 65.0% | |
ACACAGACCACCCCCAGGGA+AGG | + | chr5_3:55964713-55964732 | Msa0819490:intron | 65.0% | |
GATCTGGCAGCCCACGTCCA+AGG | - | chr5_3:55966505-55966524 | None:intergenic | 65.0% | |
TCCACAGCCCCTCAAGCACG+AGG | + | chr5_3:55966820-55966839 | Msa0819490:intron | 65.0% | |
AACTAGTGCCCCCGGGGCAA+TGG | - | chr5_3:55967272-55967291 | None:intergenic | 65.0% | |
GAGATCGGGGGCGGAGAGAG+GGG | - | chr5_3:55961695-55961714 | None:intergenic | 70.0% | |
GGAGATCGGGGGCGGAGAGA+GGG | - | chr5_3:55961696-55961715 | None:intergenic | 70.0% | |
GAGAAGGCGGAGATCGGGGG+CGG | - | chr5_3:55961704-55961723 | None:intergenic | 70.0% | |
CTCAGAGCGACCGGCGGATG+TGG | + | chr5_3:55962389-55962408 | Msa0819490:CDS | 70.0% | |
AGAGCGACCGGCGGATGTGG+AGG | + | chr5_3:55962392-55962411 | Msa0819490:CDS | 70.0% | |
GACCGGCGGATGTGGAGGTG+AGG | + | chr5_3:55962397-55962416 | Msa0819490:CDS | 70.0% | |
TGGCCACGTGCTCGGCACGT+GGG | - | chr5_3:55966724-55966743 | None:intergenic | 70.0% | |
GCCTCGTGCTTGAGGGGCTG+TGG | - | chr5_3:55966824-55966843 | None:intergenic | 70.0% | |
CGGAGATCGGGGGCGGAGAG+AGG | - | chr5_3:55961697-55961716 | None:intergenic | 75.0% | |
TCGCCCACGTGCCGAGCACG+TGG | + | chr5_3:55966718-55966737 | Msa0819490:intron | 75.0% | |
CTGGCCACGTGCTCGGCACG+TGG | - | chr5_3:55966725-55966744 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_3 | gene | 55961442 | 55970841 | 55961442 | ID=Msa0819490;Name=Msa0819490 |
chr5_3 | mRNA | 55961442 | 55970841 | 55961442 | ID=Msa0819490-mRNA-1;Parent=Msa0819490;Name=Msa0819490-mRNA-1;_AED=0.08;_eAED=0.08;_QI=180|0.86|0.93|0.93|1|1|16|483|824 |
chr5_3 | exon | 55961442 | 55961882 | 55961442 | ID=Msa0819490-mRNA-1:exon:16886;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55962387 | 55962674 | 55962387 | ID=Msa0819490-mRNA-1:exon:16887;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55963491 | 55963706 | 55963491 | ID=Msa0819490-mRNA-1:exon:16888;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55964251 | 55964388 | 55964251 | ID=Msa0819490-mRNA-1:exon:16889;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55964492 | 55964650 | 55964492 | ID=Msa0819490-mRNA-1:exon:16890;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55965071 | 55965232 | 55965071 | ID=Msa0819490-mRNA-1:exon:16891;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55965618 | 55965851 | 55965618 | ID=Msa0819490-mRNA-1:exon:16892;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55965932 | 55966081 | 55965932 | ID=Msa0819490-mRNA-1:exon:16893;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55968316 | 55968408 | 55968316 | ID=Msa0819490-mRNA-1:exon:16894;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55968707 | 55968802 | 55968707 | ID=Msa0819490-mRNA-1:exon:16895;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55968955 | 55969083 | 55968955 | ID=Msa0819490-mRNA-1:exon:16896;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55969191 | 55969268 | 55969191 | ID=Msa0819490-mRNA-1:exon:16897;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55969481 | 55969639 | 55969481 | ID=Msa0819490-mRNA-1:exon:16898;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55969729 | 55969873 | 55969729 | ID=Msa0819490-mRNA-1:exon:16899;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55969977 | 55970059 | 55969977 | ID=Msa0819490-mRNA-1:exon:16900;Parent=Msa0819490-mRNA-1 |
chr5_3 | exon | 55970275 | 55970841 | 55970275 | ID=Msa0819490-mRNA-1:exon:16901;Parent=Msa0819490-mRNA-1 |
chr5_3 | five_prime_UTR | 55961442 | 55961621 | 55961442 | ID=Msa0819490-mRNA-1:five_prime_utr;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55961622 | 55961882 | 55961622 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55962387 | 55962674 | 55962387 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55963491 | 55963706 | 55963491 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55964251 | 55964388 | 55964251 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55964492 | 55964650 | 55964492 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55965071 | 55965232 | 55965071 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55965618 | 55965851 | 55965618 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55965932 | 55966081 | 55965932 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55968316 | 55968408 | 55968316 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55968707 | 55968802 | 55968707 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55968955 | 55969083 | 55968955 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55969191 | 55969268 | 55969191 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55969481 | 55969639 | 55969481 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55969729 | 55969873 | 55969729 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55969977 | 55970059 | 55969977 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | CDS | 55970275 | 55970358 | 55970275 | ID=Msa0819490-mRNA-1:cds;Parent=Msa0819490-mRNA-1 |
chr5_3 | three_prime_UTR | 55970359 | 55970841 | 55970359 | ID=Msa0819490-mRNA-1:three_prime_utr;Parent=Msa0819490-mRNA-1 |
Gene Sequence |
Protein sequence |