AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0849390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0849390 MtrunA17_Chr5g0423771 85.864 191 4 1 1 168 1 191 2.72e-112 317
Msa0849390 MtrunA17_Chr4g0047771 39.429 175 79 3 7 155 3 176 5.57e-35 120
Msa0849390 MtrunA17_Chr1g0209281 36.413 184 91 2 7 167 4 184 2.25e-33 117
Msa0849390 MtrunA17_Chr2g0318011 39.521 167 78 1 6 149 2 168 2.20e-30 108
Msa0849390 MtrunA17_Chr1g0209301 32.941 85 57 0 83 167 18 102 2.15e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0849390 AT1G13380.1 61.780 191 47 2 1 168 1 188 3.27e-66 200
Msa0849390 AT4G27435.1 39.412 170 80 1 6 152 2 171 3.08e-36 124
Msa0849390 AT3G15480.1 36.970 165 80 2 6 146 2 166 7.05e-34 118
Msa0849390 AT1G61065.1 38.788 165 76 3 20 160 16 179 6.88e-31 110
Msa0849390 AT1G52910.1 36.364 165 81 2 6 146 2 166 5.33e-30 108
Msa0849390 AT1G68220.1 34.503 171 87 2 19 165 16 185 9.62e-26 97.8

Find 49 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTCCTATTTCTTCTTTC+AGG 0.118110 5_4:+36152794 Msa0849390:CDS
CGCCTAAATTTCGATATTAA+TGG 0.129871 5_4:-36154044 None:intergenic
ATAAATAATTCCCCGGTATT+TGG 0.197206 5_4:-36153671 None:intergenic
TTCAGGTGAATCACTGCTTA+TGG 0.206084 5_4:+36152811 Msa0849390:CDS
TTCCATTAATATCGAAATTT+AGG 0.232176 5_4:+36154042 Msa0849390:three_prime_UTR
TCAGATGTTGCAACTGGTTA+TGG 0.298329 5_4:+36152764 Msa0849390:CDS
AACTAGTGTTTATAATGTTC+TGG 0.315559 5_4:+36153992 Msa0849390:three_prime_UTR
TCAGGTGAATCACTGCTTAT+GGG 0.342216 5_4:+36152812 Msa0849390:CDS
ATTCACCTGAAAGAAGAAAT+AGG 0.343625 5_4:-36152799 None:intergenic
GTTTGTTGCTTAGTTGCATT+TGG 0.366885 5_4:+36149777 Msa0849390:CDS
AGGAAAGGCATCTTCATTAC+CGG 0.367227 5_4:+36153721 Msa0849390:CDS
ACTTCTCCTGTGAAAGTTTG+AGG 0.369772 5_4:+36153701 Msa0849390:CDS
CAATATGTTTCATTTGTTCC+TGG 0.388667 5_4:-36152731 None:intergenic
CACTTTCTCAGAAGACCAAT+CGG 0.400256 5_4:+36153818 Msa0849390:CDS
TCCCCGGTATTTGGTGTGAT+AGG 0.408796 5_4:-36153662 None:intergenic
CGAAGGGGATATATGTAATC+AGG 0.416105 5_4:+36154065 Msa0849390:three_prime_UTR
GCCTTTCCTCAAACTTTCAC+AGG 0.425540 5_4:-36153707 None:intergenic
TACAGTTCAGATGTTGCAAC+TGG 0.428312 5_4:+36152758 Msa0849390:CDS
TGTTCCTGGAGTTGTGTGAA+TGG 0.437125 5_4:-36152717 None:intergenic
AGTAAAGTGAGAAGCTGAAA+CGG 0.468311 5_4:-36149650 None:intergenic
CAAGGTCAATCATGCATGTC+CGG 0.491279 5_4:-36153863 None:intergenic
ATGCCTATCACACCAAATAC+CGG 0.505251 5_4:+36153659 Msa0849390:CDS
CGATTGGTCTTCTGAGAAAG+TGG 0.515883 5_4:-36153817 None:intergenic
CACAAACCCATTTCACAAAG+TGG 0.524004 5_4:+36149704 Msa0849390:five_prime_UTR
TAATATCGAAATTTAGGCGA+AGG 0.528725 5_4:+36154048 Msa0849390:three_prime_UTR
TACTCTTTCATATTCATCCA+AGG 0.535313 5_4:-36153881 None:intergenic
GCAGAATCATGCTTAATAGC+TGG 0.536563 5_4:+36153625 Msa0849390:CDS
TGATTCTGCAACCAGAAAAG+TGG 0.540613 5_4:-36153611 None:intergenic
AATCGGGTTAGTTCCACGAT+TGG 0.543860 5_4:+36153835 Msa0849390:CDS
CGGACATGCATGATTGACCT+TGG 0.545157 5_4:+36153864 Msa0849390:exon
AATATCGAAATTTAGGCGAA+GGG 0.551608 5_4:+36154049 Msa0849390:three_prime_UTR
TGCCTATCACACCAAATACC+GGG 0.552373 5_4:+36153660 Msa0849390:CDS
TCCTGTGAAAGTTTGAGGAA+AGG 0.553407 5_4:+36153706 Msa0849390:CDS
TAGTGTTTATAATGTTCTGG+TGG 0.553637 5_4:+36153995 Msa0849390:three_prime_UTR
ACTTTCTCAGAAGACCAATC+GGG 0.557107 5_4:+36153819 Msa0849390:CDS
TACAACGATGAAAATTGCTC+CGG 0.580379 5_4:-36153740 None:intergenic
GGAACCATTCACACAACTCC+AGG 0.583570 5_4:+36152713 Msa0849390:CDS
AGTTCCACGATTGGAATGAC+CGG 0.588851 5_4:+36153844 Msa0849390:CDS
AATCGTGGAACTAACCCGAT+TGG 0.605332 5_4:-36153833 None:intergenic
TCTGAGCATAAATAATTCCC+CGG 0.610710 5_4:-36153678 None:intergenic
GTTGCAACTGGTTATGGAGT+GGG 0.613168 5_4:+36152770 Msa0849390:CDS
CTTCTGAGAAAGTGGAGTGG+TGG 0.624718 5_4:-36153809 None:intergenic
TTTACTACTTGGTAAAACAG+TGG 0.633637 5_4:+36153945 Msa0849390:three_prime_UTR
ATATCGAAATTTAGGCGAAG+GGG 0.640496 5_4:+36154050 Msa0849390:three_prime_UTR
ATGTCCGGTCATTCCAATCG+TGG 0.657041 5_4:-36153848 None:intergenic
CTACTACATGTATTTCACAA+AGG 0.674896 5_4:+36153783 Msa0849390:CDS
GCCTATCACACCAAATACCG+GGG 0.675980 5_4:+36153661 Msa0849390:CDS
TGTTGCAACTGGTTATGGAG+TGG 0.682410 5_4:+36152769 Msa0849390:CDS
GGTCTTCTGAGAAAGTGGAG+TGG 0.743246 5_4:-36153812 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATTTGATATATTTGT+AGG + chr5_4:36150422-36150441 Msa0849390:intron 10.0%
!!! ATAAAATAGATTTAGAATAA+AGG + chr5_4:36150763-36150782 Msa0849390:intron 10.0%
!!! TAAAATAGATTTAGAATAAA+GGG + chr5_4:36150764-36150783 Msa0849390:intron 10.0%
!!! TTCATTTATCTTTTTTTTTT+GGG + chr5_4:36151453-36151472 Msa0849390:intron 10.0%
!! TAGAAATAAAAAAAAAAACG+AGG + chr5_4:36150655-36150674 Msa0849390:intron 15.0%
!! AGAAATAAAAAAAAAAACGA+GGG + chr5_4:36150656-36150675 Msa0849390:intron 15.0%
!! CAAAAAAAAAAGATAAATGA+AGG - chr5_4:36151454-36151473 None:intergenic 15.0%
!!! CTTCATTTATCTTTTTTTTT+TGG + chr5_4:36151452-36151471 Msa0849390:intron 15.0%
!!! TCATTTATCTTTTTTTTTTG+GGG + chr5_4:36151454-36151473 Msa0849390:intron 15.0%
!!! TCAATATCTAAAATATTTTC+TGG - chr5_4:36151868-36151887 None:intergenic 15.0%
!!! CTTCATATTTTACATTAATT+TGG + chr5_4:36152663-36152682 Msa0849390:intron 15.0%
!! AGAAGAAAGAAAATATATAA+TGG - chr5_4:36152897-36152916 None:intergenic 15.0%
!!! TTATATATTTTCTTTCTTCT+TGG + chr5_4:36152897-36152916 Msa0849390:intron 15.0%
!!! ATTATTGGAAATTTCATTTT+TGG + chr5_4:36153044-36153063 Msa0849390:intron 15.0%
!!! TTTTTTGAACAAGCTAAATT+AGG + chr5_4:36150141-36150160 Msa0849390:intron 20.0%
!! TTATTATAAATGCAAGATGA+AGG + chr5_4:36150320-36150339 Msa0849390:intron 20.0%
!!! TGTGATTGAAGTTTTAAAAA+TGG + chr5_4:36150464-36150483 Msa0849390:intron 20.0%
!!! GTGATTGAAGTTTTAAAAAT+GGG + chr5_4:36150465-36150484 Msa0849390:intron 20.0%
!!! TGATTGAAGTTTTAAAAATG+GGG + chr5_4:36150466-36150485 Msa0849390:intron 20.0%
!! ATTTGCTCAATAAATTATTG+AGG + chr5_4:36150684-36150703 Msa0849390:intron 20.0%
!! AATATCTTGTTCATTGAAAA+TGG + chr5_4:36150860-36150879 Msa0849390:intron 20.0%
!! TTAACTGAAAATATAATACG+AGG + chr5_4:36150937-36150956 Msa0849390:intron 20.0%
!! TAACTGAAAATATAATACGA+GGG + chr5_4:36150938-36150957 Msa0849390:intron 20.0%
!! AAATTAGTGTTATATGCATT+AGG + chr5_4:36150984-36151003 Msa0849390:intron 20.0%
!! TTTCAAAGAAAAAAGGTAAT+AGG - chr5_4:36151428-36151447 None:intergenic 20.0%
!!! AAGGTTATTTCAAAGAAAAA+AGG - chr5_4:36151435-36151454 None:intergenic 20.0%
!!! CATTTATCTTTTTTTTTTGG+GGG + chr5_4:36151455-36151474 Msa0849390:intron 20.0%
!! TATTTAAGTACTAGAAAGAA+GGG + chr5_4:36151510-36151529 Msa0849390:intron 20.0%
!!! AAGGGATATTTTATATTTTC+TGG + chr5_4:36151816-36151835 Msa0849390:intron 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG + chr5_4:36152103-36152122 Msa0849390:intron 20.0%
!! ATGTAAAAGAATTAGTAGAA+GGG - chr5_4:36152346-36152365 None:intergenic 20.0%
!!! CTATCAATTTTATCTTCATA+GGG + chr5_4:36152458-36152477 Msa0849390:intron 20.0%
!!! TTTCCAATAATTTTTTTCAC+TGG - chr5_4:36153035-36153054 None:intergenic 20.0%
!!! TCATCTTTTCTTGATTTATT+TGG + chr5_4:36153069-36153088 Msa0849390:intron 20.0%
!! ACTAACAAAGAACATATTTA+TGG + chr5_4:36153258-36153277 Msa0849390:intron 20.0%
!! AAAACAAAAAACACATATAG+TGG - chr5_4:36153448-36153467 None:intergenic 20.0%
!!! TTTTTTTTTTCCTTTTTTCC+AGG + chr5_4:36153587-36153606 Msa0849390:intron 20.0%
!!! TTTTTTTTTCCTTTTTTCCA+GGG + chr5_4:36153588-36153607 Msa0849390:intron 20.0%
!! TTCCATTAATATCGAAATTT+AGG + chr5_4:36154042-36154061 Msa0849390:three_prime_UTR 20.0%
!! TTTTTACCACTTTGTGAAAT+GGG - chr5_4:36149713-36149732 None:intergenic 25.0%
!! ATTTTTACCACTTTGTGAAA+TGG - chr5_4:36149714-36149733 None:intergenic 25.0%
! ATTTCACAAAGTGGTAAAAA+TGG + chr5_4:36149713-36149732 Msa0849390:exon 25.0%
!!! GATCTCTTTAAAATGAACAA+TGG - chr5_4:36149882-36149901 None:intergenic 25.0%
!!! TTTTTGTGTCTGTTTAAGTT+TGG + chr5_4:36149910-36149929 Msa0849390:intron 25.0%
!!! TTTTGTGTCTGTTTAAGTTT+GGG + chr5_4:36149911-36149930 Msa0849390:intron 25.0%
! AATAACAATGAACACATCAA+TGG - chr5_4:36150302-36150321 None:intergenic 25.0%
!!! TTGTAGGTTGATATATTTGT+AGG + chr5_4:36150438-36150457 Msa0849390:intron 25.0%
!!! GATTGAAGTTTTAAAAATGG+GGG + chr5_4:36150467-36150486 Msa0849390:intron 25.0%
!! GACTTTTAAATGGAATATGA+TGG + chr5_4:36150496-36150515 Msa0849390:intron 25.0%
! TTAAATGGAATATGATGGTT+TGG + chr5_4:36150501-36150520 Msa0849390:intron 25.0%
! AATGCAAAAGATAGACTTAA+TGG + chr5_4:36150625-36150644 Msa0849390:intron 25.0%
! AACTGAAAATATAATACGAG+GGG + chr5_4:36150939-36150958 Msa0849390:intron 25.0%
!! CTTCTTTCTAGTACTTAAAT+AGG - chr5_4:36151511-36151530 None:intergenic 25.0%
! CTATTTAAGTACTAGAAAGA+AGG + chr5_4:36151509-36151528 Msa0849390:intron 25.0%
!! CTTTTCGTGAAAATAACTAA+AGG + chr5_4:36151712-36151731 Msa0849390:intron 25.0%
! GTGAAAATAACTAAAGGAAT+GGG + chr5_4:36151718-36151737 Msa0849390:intron 25.0%
! TGAAAATAACTAAAGGAATG+GGG + chr5_4:36151719-36151738 Msa0849390:intron 25.0%
! TTTACATATGCATACAGTAA+GGG + chr5_4:36151798-36151817 Msa0849390:intron 25.0%
!! GGATATTTTATATTTTCTGG+TGG + chr5_4:36151819-36151838 Msa0849390:intron 25.0%
!!! TCTATTCCATTTTTGTTTCT+TGG - chr5_4:36151961-36151980 None:intergenic 25.0%
! AATTCAGTGTAATTATGTGT+CGG - chr5_4:36152080-36152099 None:intergenic 25.0%
! ATCATTTCTATATCCTATGA+AGG - chr5_4:36152136-36152155 None:intergenic 25.0%
!!! AAGTTCTGAAAAACAATGAA+GGG - chr5_4:36152200-36152219 None:intergenic 25.0%
! AGAAAACATGCATAATACAA+AGG - chr5_4:36152317-36152336 None:intergenic 25.0%
! TGTAAAAGAATTAGTAGAAG+GGG - chr5_4:36152345-36152364 None:intergenic 25.0%
! CATGTAAAAGAATTAGTAGA+AGG - chr5_4:36152347-36152366 None:intergenic 25.0%
!! CTACTAATTCTTTTACATGA+AGG + chr5_4:36152348-36152367 Msa0849390:intron 25.0%
! CCTATGAAGATAAAATTGAT+AGG - chr5_4:36152460-36152479 None:intergenic 25.0%
!! CCTATCAATTTTATCTTCAT+AGG + chr5_4:36152457-36152476 Msa0849390:intron 25.0%
!!! TAGATTGATTTTGTTGGTTA+AGG + chr5_4:36152517-36152536 Msa0849390:intron 25.0%
! CATGGAATAAAACTAGAATT+AGG + chr5_4:36152553-36152572 Msa0849390:intron 25.0%
! TAAAACTAGAATTAGGCATA+TGG + chr5_4:36152560-36152579 Msa0849390:intron 25.0%
! TATGGAGTAAAACTAGAATT+AGG + chr5_4:36152578-36152597 Msa0849390:intron 25.0%
! TGTATGCTTTAATGTTTCAT+AGG + chr5_4:36152621-36152640 Msa0849390:intron 25.0%
! TGTCCAGTGAAAAAAATTAT+TGG + chr5_4:36153029-36153048 Msa0849390:intron 25.0%
! TCTTGATTTATTTGGTTGAT+TGG + chr5_4:36153077-36153096 Msa0849390:intron 25.0%
!!! TTTTTGTTTTGCTACATTGA+AGG - chr5_4:36153131-36153150 None:intergenic 25.0%
! TTTGGTTAGAATAACCAAAT+AGG + chr5_4:36153407-36153426 Msa0849390:intron 25.0%
! ATGAAACAATGATTCCTATT+TGG - chr5_4:36153424-36153443 None:intergenic 25.0%
! AATTTATTGTGTGATCTATG+AGG + chr5_4:36153519-36153538 Msa0849390:intron 25.0%
!!! AGTAACAAATTTTGAGTCTT+CGG + chr5_4:36153900-36153919 Msa0849390:three_prime_UTR 25.0%
! AACTAGTGTTTATAATGTTC+TGG + chr5_4:36153992-36154011 Msa0849390:three_prime_UTR 25.0%
ATTGCATAGGATGGTTTATT+TGG + chr5_4:36149944-36149963 Msa0849390:intron 30.0%
TGTTCGTGATAATTATGAGA+AGG + chr5_4:36150030-36150049 Msa0849390:intron 30.0%
!! GTTTTGAACACATAGTATCA+TGG + chr5_4:36150059-36150078 Msa0849390:intron 30.0%
!! TAGTTGTTTTACACTAATCG+AGG + chr5_4:36150106-36150125 Msa0849390:intron 30.0%
!! AGTTGTTTTACACTAATCGA+GGG + chr5_4:36150107-36150126 Msa0849390:intron 30.0%
ATTCTTCCCAATGTCAATTT+GGG - chr5_4:36150170-36150189 None:intergenic 30.0%
AATTCTTCCCAATGTCAATT+TGG - chr5_4:36150171-36150190 None:intergenic 30.0%
AGGTAAATTACTTGAGATGA+TGG + chr5_4:36150340-36150359 Msa0849390:intron 30.0%
GGTAAATTACTTGAGATGAT+GGG + chr5_4:36150341-36150360 Msa0849390:intron 30.0%
TTTGGCTACTTAAATTTGTG+TGG + chr5_4:36150519-36150538 Msa0849390:intron 30.0%
AATTTGTGTGGAAGAAGATT+TGG + chr5_4:36150531-36150550 Msa0849390:intron 30.0%
AACCAAATAGCAAATATGAG+AGG + chr5_4:36150738-36150757 Msa0849390:intron 30.0%
ACCAAATAGCAAATATGAGA+GGG + chr5_4:36150739-36150758 Msa0849390:intron 30.0%
ATCTTGTTCATTGAAAATGG+AGG + chr5_4:36150863-36150882 Msa0849390:intron 30.0%
! TATATGCATTAGGTTTTCAC+AGG + chr5_4:36150994-36151013 Msa0849390:intron 30.0%
CACAGGTTATATAGTGAAAT+AGG + chr5_4:36151011-36151030 Msa0849390:intron 30.0%
!!! TGAAGTCTCTTGTTTTCTTT+TGG + chr5_4:36151277-36151296 Msa0849390:intron 30.0%
!!! TGTTTTCTTTTGGTGTTACA+TGG + chr5_4:36151287-36151306 Msa0849390:intron 30.0%
GAAAGAATACCTTCAAACAA+TGG + chr5_4:36151314-36151333 Msa0849390:intron 30.0%
TATGTTGTACCATTGTTTGA+AGG - chr5_4:36151326-36151345 None:intergenic 30.0%
AAACAATGGTACAACATACT+GGG + chr5_4:36151328-36151347 Msa0849390:intron 30.0%
GAGTAACAATCATACAAAAG+CGG - chr5_4:36151679-36151698 None:intergenic 30.0%
CGTGAAAATAACTAAAGGAA+TGG + chr5_4:36151717-36151736 Msa0849390:intron 30.0%
GTTTACATATGCATACAGTA+AGG + chr5_4:36151797-36151816 Msa0849390:intron 30.0%
! ATTTTGCTTCCAGTATCATA+GGG - chr5_4:36151928-36151947 None:intergenic 30.0%
TTTCTATATCCTATGAAGGA+TGG - chr5_4:36152132-36152151 None:intergenic 30.0%
!! GAAGTTCTGAAAAACAATGA+AGG - chr5_4:36152201-36152220 None:intergenic 30.0%
AATATTTGGAAATGTGAGGA+GGG - chr5_4:36152268-36152287 None:intergenic 30.0%
AAATATTTGGAAATGTGAGG+AGG - chr5_4:36152269-36152288 None:intergenic 30.0%
AACATGCATAATACAAAGGA+CGG - chr5_4:36152313-36152332 None:intergenic 30.0%
ATGTCAAAAAGAAACATAGC+AGG + chr5_4:36152486-36152505 Msa0849390:intron 30.0%
!! GATGAGTAGATTGATTTTGT+TGG + chr5_4:36152511-36152530 Msa0849390:intron 30.0%
!! TTGGTTAAGGTATTTTGTGA+GGG + chr5_4:36152530-36152549 Msa0849390:intron 30.0%
AGTAAAACTAGAATTAGGCA+TGG + chr5_4:36152583-36152602 Msa0849390:intron 30.0%
CAATATGTTTCATTTGTTCC+TGG - chr5_4:36152734-36152753 None:intergenic 30.0%
ATTCACCTGAAAGAAGAAAT+AGG - chr5_4:36152802-36152821 None:intergenic 30.0%
AAATGAGTAAGACACACTTT+GGG - chr5_4:36153160-36153179 None:intergenic 30.0%
TAAATGAGTAAGACACACTT+TGG - chr5_4:36153161-36153180 None:intergenic 30.0%
AAGTGTGTCTTACTCATTTA+AGG + chr5_4:36153161-36153180 Msa0849390:intron 30.0%
AGTGTGTCTTACTCATTTAA+GGG + chr5_4:36153162-36153181 Msa0849390:intron 30.0%
TACTCATTTAAGGGTTCAAA+CGG + chr5_4:36153171-36153190 Msa0849390:intron 30.0%
ATGTTCTTTGTTAGTCAACT+TGG - chr5_4:36153253-36153272 None:intergenic 30.0%
! TTTTATCCGTTAATTGTGTG+AGG - chr5_4:36153329-36153348 None:intergenic 30.0%
!!! ACTCATTTTGGCTATAGATT+TGG + chr5_4:36153389-36153408 Msa0849390:intron 30.0%
! TCTTCACTAGTGAATCATTT+TGG + chr5_4:36153552-36153571 Msa0849390:intron 30.0%
ATAAATAATTCCCCGGTATT+TGG - chr5_4:36153674-36153693 None:intergenic 30.0%
! AATTTTCATCGTTGTAACGA+TGG + chr5_4:36153747-36153766 Msa0849390:CDS 30.0%
CTACTACATGTATTTCACAA+AGG + chr5_4:36153783-36153802 Msa0849390:CDS 30.0%
TACTCTTTCATATTCATCCA+AGG - chr5_4:36153884-36153903 None:intergenic 30.0%
! TCTCTGTGATTTTTACTACT+TGG + chr5_4:36153934-36153953 Msa0849390:three_prime_UTR 30.0%
TTTACTACTTGGTAAAACAG+TGG + chr5_4:36153945-36153964 Msa0849390:three_prime_UTR 30.0%
TAGTGTTTATAATGTTCTGG+TGG + chr5_4:36153995-36154014 Msa0849390:three_prime_UTR 30.0%
CGCCTAAATTTCGATATTAA+TGG - chr5_4:36154047-36154066 None:intergenic 30.0%
TAATATCGAAATTTAGGCGA+AGG + chr5_4:36154048-36154067 Msa0849390:three_prime_UTR 30.0%
AATATCGAAATTTAGGCGAA+GGG + chr5_4:36154049-36154068 Msa0849390:three_prime_UTR 30.0%
!! AAAGTGTGTAGAGTATTTTG+AGG + chr5_4:36154108-36154127 Msa0849390:three_prime_UTR 30.0%
AGTAAAGTGAGAAGCTGAAA+CGG - chr5_4:36149653-36149672 None:intergenic 35.0%
AAAGTGGTAAAAATGGCAGA+GGG + chr5_4:36149720-36149739 Msa0849390:exon 35.0%
! GTTTGTTGCTTAGTTGCATT+TGG + chr5_4:36149777-36149796 Msa0849390:CDS 35.0%
! TGTCTGTTTAAGTTTGGGTT+TGG + chr5_4:36149916-36149935 Msa0849390:intron 35.0%
! GTCTGTTTAAGTTTGGGTTT+GGG + chr5_4:36149917-36149936 Msa0849390:intron 35.0%
TTGGGAAAAATTGCATAGGA+TGG + chr5_4:36149935-36149954 Msa0849390:intron 35.0%
!! GTTGTTTTACACTAATCGAG+GGG + chr5_4:36150108-36150127 Msa0849390:intron 35.0%
GAACACATCAATGGATGATA+AGG - chr5_4:36150293-36150312 None:intergenic 35.0%
TCATTGAAAATGGAGGTCTT+TGG + chr5_4:36150870-36150889 Msa0849390:intron 35.0%
!! AAAATGGAGGTCTTTGGAAT+AGG + chr5_4:36150876-36150895 Msa0849390:intron 35.0%
!! AAATGGAGGTCTTTGGAATA+GGG + chr5_4:36150877-36150896 Msa0849390:intron 35.0%
TGTTTACCATGTCCTTGAAT+TGG + chr5_4:36151103-36151122 Msa0849390:intron 35.0%
! TGACTGGCTAATTTCTATCA+TGG - chr5_4:36151156-36151175 None:intergenic 35.0%
CAAACAATGGTACAACATAC+TGG + chr5_4:36151327-36151346 Msa0849390:intron 35.0%
TGCTAGAATACATACAGCAT+TGG + chr5_4:36151356-36151375 Msa0849390:intron 35.0%
! ATAGGTGTCACAAGAATGAT+AGG - chr5_4:36151410-36151429 None:intergenic 35.0%
TTACCTTCTACTGTGTAAAG+AGG + chr5_4:36151484-36151503 Msa0849390:intron 35.0%
GGTCGTATCACATATATGAA+CGG - chr5_4:36151847-36151866 None:intergenic 35.0%
! GATTTTGCTTCCAGTATCAT+AGG - chr5_4:36151929-36151948 None:intergenic 35.0%
ATGCGACCAAGAAACAAAAA+TGG + chr5_4:36151952-36151971 Msa0849390:intron 35.0%
GGATATAGAAATGATAACCC+TGG + chr5_4:36152141-36152160 Msa0849390:intron 35.0%
GGGAAATATTTGGAAATGTG+AGG - chr5_4:36152272-36152291 None:intergenic 35.0%
AGGGAAGTGAAAGAGAAAAA+CGG - chr5_4:36152392-36152411 None:intergenic 35.0%
AGGGCAAAAAGAATATGAGA+GGG - chr5_4:36152411-36152430 None:intergenic 35.0%
AAGGGCAAAAAGAATATGAG+AGG - chr5_4:36152412-36152431 None:intergenic 35.0%
AACAAGGCAATGGAGTAAAA+GGG - chr5_4:36152430-36152449 None:intergenic 35.0%
TAACAAGGCAATGGAGTAAA+AGG - chr5_4:36152431-36152450 None:intergenic 35.0%
ATTGATAGGCTCGATTAACA+AGG - chr5_4:36152446-36152465 None:intergenic 35.0%
!! GTTGGTTAAGGTATTTTGTG+AGG + chr5_4:36152529-36152548 Msa0849390:intron 35.0%
! GCTTTCCTATTTCTTCTTTC+AGG + chr5_4:36152794-36152813 Msa0849390:CDS 35.0%
!! GGTTGATTGGTTTAAGTATG+TGG + chr5_4:36153090-36153109 Msa0849390:intron 35.0%
ACAATGCCTCACACAATTAA+CGG + chr5_4:36153320-36153339 Msa0849390:intron 35.0%
CTATAGCCAAAATGAGTGAA+GGG - chr5_4:36153386-36153405 None:intergenic 35.0%
TCTATAGCCAAAATGAGTGA+AGG - chr5_4:36153387-36153406 None:intergenic 35.0%
TTTATTCACACGAAGCTTCT+TGG + chr5_4:36153466-36153485 Msa0849390:intron 35.0%
TCTGAGCATAAATAATTCCC+CGG - chr5_4:36153681-36153700 None:intergenic 35.0%
TACAACGATGAAAATTGCTC+CGG - chr5_4:36153743-36153762 None:intergenic 35.0%
!!! GTAAAACAGTGGTTTTGACT+TGG + chr5_4:36153956-36153975 Msa0849390:three_prime_UTR 35.0%
ATATCGAAATTTAGGCGAAG+GGG + chr5_4:36154050-36154069 Msa0849390:three_prime_UTR 35.0%
CACAAACCCATTTCACAAAG+TGG + chr5_4:36149704-36149723 Msa0849390:five_prime_UTR 40.0%
CAAAGTGGTAAAAATGGCAG+AGG + chr5_4:36149719-36149738 Msa0849390:exon 40.0%
GGGTTTGGGAAAAATTGCAT+AGG + chr5_4:36149931-36149950 Msa0849390:intron 40.0%
!! GGGGCGATTTGACTTTTAAA+TGG + chr5_4:36150486-36150505 Msa0849390:intron 40.0%
TATTGAGGAAGCCATAGTAG+AGG + chr5_4:36150699-36150718 Msa0849390:intron 40.0%
CACGCTAATTTCCTCTACTA+TGG - chr5_4:36150713-36150732 None:intergenic 40.0%
TAGTAGAGGAAATTAGCGTG+TGG + chr5_4:36150713-36150732 Msa0849390:intron 40.0%
!! GCCCTCTCATATTTGCTATT+TGG - chr5_4:36150743-36150762 None:intergenic 40.0%
!! CTTTGGAATAGGGAAGTTTC+TGG + chr5_4:36150887-36150906 Msa0849390:intron 40.0%
ACATGGTAAACACTTCCACT+TGG - chr5_4:36151095-36151114 None:intergenic 40.0%
ACTCTAGCAACACCAATTCA+AGG - chr5_4:36151118-36151137 None:intergenic 40.0%
TTGAAAGCAGTACAGTTGAC+TGG - chr5_4:36151172-36151191 None:intergenic 40.0%
TACAAAGCAGTGTGACAATG+AGG - chr5_4:36151196-36151215 None:intergenic 40.0%
AGAAAGAAGGGTTGACTAGA+TGG + chr5_4:36151522-36151541 Msa0849390:intron 40.0%
GAGGATAGCTCAATAGTTAG+AGG + chr5_4:36151544-36151563 Msa0849390:intron 40.0%
TCAAACCACTAGGAGAGTTA+TGG + chr5_4:36151589-36151608 Msa0849390:intron 40.0%
AATGTCCATAACTCTCCTAG+TGG - chr5_4:36151597-36151616 None:intergenic 40.0%
CTAGGAGAGTTATGGACATT+TGG + chr5_4:36151597-36151616 Msa0849390:intron 40.0%
TGACCAACAGTTCATAGGTT+AGG - chr5_4:36151624-36151643 None:intergenic 40.0%
ATCATACAAAAGCGGAGCTT+TGG - chr5_4:36151671-36151690 None:intergenic 40.0%
CTCTCAATTCCCTATGATAC+TGG + chr5_4:36151916-36151935 Msa0849390:intron 40.0%
TGATCGTTCTATAAGGAGCA+TGG - chr5_4:36151985-36152004 None:intergenic 40.0%
TGCTCCTTATAGAACGATCA+CGG + chr5_4:36151985-36152004 Msa0849390:intron 40.0%
! GTGTAATTATGTGTCGGTGT+CGG - chr5_4:36152074-36152093 None:intergenic 40.0%
AATGATAACCCTGGATGAGA+AGG + chr5_4:36152150-36152169 Msa0849390:intron 40.0%
AAACAATGAAGGGTCTGTCT+GGG - chr5_4:36152190-36152209 None:intergenic 40.0%
AAAACAATGAAGGGTCTGTC+TGG - chr5_4:36152191-36152210 None:intergenic 40.0%
AGGGTGTAACATATTCAAGG+AGG - chr5_4:36152231-36152250 None:intergenic 40.0%
! CAGAGGGTGTAACATATTCA+AGG - chr5_4:36152234-36152253 None:intergenic 40.0%
CTTGAATATGTTACACCCTC+TGG + chr5_4:36152232-36152251 Msa0849390:intron 40.0%
ATGCATAATACAAAGGACGG+TGG - chr5_4:36152310-36152329 None:intergenic 40.0%
! AAAGAGAAAAACGGGCTTGA+AGG - chr5_4:36152383-36152402 None:intergenic 40.0%
GGGAAGTGAAAGAGAAAAAC+GGG - chr5_4:36152391-36152410 None:intergenic 40.0%
!! TAAGGTATTTTGTGAGGGCA+TGG + chr5_4:36152535-36152554 Msa0849390:intron 40.0%
TACAGTTCAGATGTTGCAAC+TGG + chr5_4:36152758-36152777 Msa0849390:CDS 40.0%
TCAGATGTTGCAACTGGTTA+TGG + chr5_4:36152764-36152783 Msa0849390:CDS 40.0%
TTCAGGTGAATCACTGCTTA+TGG + chr5_4:36152811-36152830 Msa0849390:CDS 40.0%
TCAGGTGAATCACTGCTTAT+GGG + chr5_4:36152812-36152831 Msa0849390:CDS 40.0%
TGACAAAGTGCATGTGCTTT+GGG + chr5_4:36152837-36152856 Msa0849390:intron 40.0%
AGAGCCAAACTAACGAACAA+AGG + chr5_4:36153214-36153233 Msa0849390:intron 40.0%
GTGTCCTTTGTTCGTTAGTT+TGG - chr5_4:36153221-36153240 None:intergenic 40.0%
! ACACAACCCTTCACTCATTT+TGG + chr5_4:36153377-36153396 Msa0849390:intron 40.0%
TGATTCTGCAACCAGAAAAG+TGG - chr5_4:36153614-36153633 None:intergenic 40.0%
GCAGAATCATGCTTAATAGC+TGG + chr5_4:36153625-36153644 Msa0849390:CDS 40.0%
ATGCCTATCACACCAAATAC+CGG + chr5_4:36153659-36153678 Msa0849390:CDS 40.0%
ACTTCTCCTGTGAAAGTTTG+AGG + chr5_4:36153701-36153720 Msa0849390:CDS 40.0%
TCCTGTGAAAGTTTGAGGAA+AGG + chr5_4:36153706-36153725 Msa0849390:CDS 40.0%
!! AGGAAAGGCATCTTCATTAC+CGG + chr5_4:36153721-36153740 Msa0849390:CDS 40.0%
CACTTTCTCAGAAGACCAAT+CGG + chr5_4:36153818-36153837 Msa0849390:CDS 40.0%
ACTTTCTCAGAAGACCAATC+GGG + chr5_4:36153819-36153838 Msa0849390:CDS 40.0%
!!! TGGTGGATTTTACTGCTCTA+AGG + chr5_4:36154012-36154031 Msa0849390:three_prime_UTR 40.0%
CGAAGGGGATATATGTAATC+AGG + chr5_4:36154065-36154084 Msa0849390:three_prime_UTR 40.0%
GTAAAAATGGCAGAGGGAAG+AGG + chr5_4:36149726-36149745 Msa0849390:exon 45.0%
TAGGCCACCCAAATTGACAT+TGG + chr5_4:36150160-36150179 Msa0849390:intron 45.0%
AGGCCACCCAAATTGACATT+GGG + chr5_4:36150161-36150180 Msa0849390:intron 45.0%
CTTCCCAATGTCAATTTGGG+TGG - chr5_4:36150167-36150186 None:intergenic 45.0%
GAAGAATTGAACCTGAGACC+TGG + chr5_4:36150183-36150202 Msa0849390:intron 45.0%
! TGGAATAGGGAAGTTTCTGG+TGG + chr5_4:36150890-36150909 Msa0849390:intron 45.0%
!! AATAGGGAAGTTTCTGGTGG+TGG + chr5_4:36150893-36150912 Msa0849390:intron 45.0%
!! GAGGGGCAGTTTTTGTTTGA+TGG + chr5_4:36150956-36150975 Msa0849390:intron 45.0%
GCAACACCAATTCAAGGACA+TGG - chr5_4:36151112-36151131 None:intergenic 45.0%
ATGGTACAACATACTGGGCT+TGG + chr5_4:36151333-36151352 Msa0849390:intron 45.0%
! TGGACTGCATGTCATTTGTC+CGG + chr5_4:36151376-36151395 Msa0849390:intron 45.0%
AGAATGATAGGCTACTGTGC+CGG - chr5_4:36151398-36151417 None:intergenic 45.0%
GGTCCTCTTTACACAGTAGA+AGG - chr5_4:36151490-36151509 None:intergenic 45.0%
AAGAAGGGTTGACTAGATGG+AGG + chr5_4:36151525-36151544 Msa0849390:intron 45.0%
GTAGAGAGAAGAACACCCAT+AGG + chr5_4:36151566-36151585 Msa0849390:intron 45.0%
CTCCTAGTGGTTTGACCTAT+GGG - chr5_4:36151584-36151603 None:intergenic 45.0%
TCTCCTAGTGGTTTGACCTA+TGG - chr5_4:36151585-36151604 None:intergenic 45.0%
GGACCTAACCTATGAACTGT+TGG + chr5_4:36151618-36151637 Msa0849390:intron 45.0%
CTTTGGCACACAACTGGAAT+TGG - chr5_4:36151654-36151673 None:intergenic 45.0%
GTGTCCGTGATCGTTCTATA+AGG - chr5_4:36151992-36152011 None:intergenic 45.0%
TAGCGGTATCCATCCTTCAT+AGG + chr5_4:36152120-36152139 Msa0849390:intron 45.0%
ATCAGGTTCCTTCTCATCCA+GGG - chr5_4:36152161-36152180 None:intergenic 45.0%
AATCAGGTTCCTTCTCATCC+AGG - chr5_4:36152162-36152181 None:intergenic 45.0%
GGGGATTGGAGGGAAATATT+TGG - chr5_4:36152282-36152301 None:intergenic 45.0%
ATACAAAGGACGGTGGCATA+GGG - chr5_4:36152303-36152322 None:intergenic 45.0%
AATACAAAGGACGGTGGCAT+AGG - chr5_4:36152304-36152323 None:intergenic 45.0%
! CTTTTACATGAAGGCCTCGA+TGG + chr5_4:36152357-36152376 Msa0849390:intron 45.0%
AGGCTCGATTAACAAGGCAA+TGG - chr5_4:36152440-36152459 None:intergenic 45.0%
TGTGAAGCAATAGCGAAGAG+AGG - chr5_4:36152692-36152711 None:intergenic 45.0%
TCTCTTCGCTATTGCTTCAC+AGG + chr5_4:36152691-36152710 Msa0849390:intron 45.0%
CTCTTCGCTATTGCTTCACA+GGG + chr5_4:36152692-36152711 Msa0849390:intron 45.0%
TGTTCCTGGAGTTGTGTGAA+TGG - chr5_4:36152720-36152739 None:intergenic 45.0%
TGTTGCAACTGGTTATGGAG+TGG + chr5_4:36152769-36152788 Msa0849390:CDS 45.0%
GTTGCAACTGGTTATGGAGT+GGG + chr5_4:36152770-36152789 Msa0849390:CDS 45.0%
GTGACAAAGTGCATGTGCTT+TGG + chr5_4:36152836-36152855 Msa0849390:intron 45.0%
TTCATCTGAGCACGCTGATA+CGG + chr5_4:36152955-36152974 Msa0849390:intron 45.0%
!! CGTTAGTTTGGCTCTCGAAT+GGG - chr5_4:36153209-36153228 None:intergenic 45.0%
!! TCGTTAGTTTGGCTCTCGAA+TGG - chr5_4:36153210-36153229 None:intergenic 45.0%
GAAAAGTGGCCCTGGAAAAA+AGG - chr5_4:36153600-36153619 None:intergenic 45.0%
!!! TTTTTCCAGGGCCACTTTTC+TGG + chr5_4:36153600-36153619 Msa0849390:intron 45.0%
TGCCTATCACACCAAATACC+GGG + chr5_4:36153660-36153679 Msa0849390:CDS 45.0%
GCCTTTCCTCAAACTTTCAC+AGG - chr5_4:36153710-36153729 None:intergenic 45.0%
!! CGATTGGTCTTCTGAGAAAG+TGG - chr5_4:36153820-36153839 None:intergenic 45.0%
AATCGTGGAACTAACCCGAT+TGG - chr5_4:36153836-36153855 None:intergenic 45.0%
!! AATCGGGTTAGTTCCACGAT+TGG + chr5_4:36153835-36153854 Msa0849390:CDS 45.0%
AGTTCCACGATTGGAATGAC+CGG + chr5_4:36153844-36153863 Msa0849390:CDS 45.0%
CAAGGTCAATCATGCATGTC+CGG - chr5_4:36153866-36153885 None:intergenic 45.0%
GAATTGAACCTGAGACCTGG+AGG + chr5_4:36150186-36150205 Msa0849390:intron 50.0%
!! CTCAACTGTGGTGTTGGCTT+GGG - chr5_4:36150230-36150249 None:intergenic 50.0%
CAAGCCAACACCACAGTTGA+GGG + chr5_4:36150229-36150248 Msa0849390:intron 50.0%
CACTTACAGTCCCTCAACTG+TGG - chr5_4:36150242-36150261 None:intergenic 50.0%
GGGAAATCGCAACACTCACA+GGG - chr5_4:36151221-36151240 None:intergenic 50.0%
CACCCATAGGTCAAACCACT+AGG + chr5_4:36151579-36151598 Msa0849390:intron 50.0%
GCGTGTGACCAACAGTTCAT+AGG - chr5_4:36151629-36151648 None:intergenic 50.0%
TGGCACACAACTGGAATTGG+TGG - chr5_4:36151651-36151670 None:intergenic 50.0%
ACTGGGACATGTCTAATCCG+AGG - chr5_4:36152016-36152035 None:intergenic 50.0%
GATTAGACATGTCCCAGTGC+CGG + chr5_4:36152018-36152037 Msa0849390:intron 50.0%
GTCTGTCTGGGTAGTGAATC+AGG - chr5_4:36152178-36152197 None:intergenic 50.0%
TACAAAGGACGGTGGCATAG+GGG - chr5_4:36152302-36152321 None:intergenic 50.0%
GAAGCAATAGCGAAGAGAGG+AGG - chr5_4:36152689-36152708 None:intergenic 50.0%
GGAACCATTCACACAACTCC+AGG + chr5_4:36152713-36152732 Msa0849390:CDS 50.0%
! CAAAGTGCATGTGCTTTGGG+AGG + chr5_4:36152840-36152859 Msa0849390:intron 50.0%
GCCTATCACACCAAATACCG+GGG + chr5_4:36153661-36153680 Msa0849390:CDS 50.0%
!! TCCCCGGTATTTGGTGTGAT+AGG - chr5_4:36153665-36153684 None:intergenic 50.0%
! CTTCTGAGAAAGTGGAGTGG+TGG - chr5_4:36153812-36153831 None:intergenic 50.0%
! GGTCTTCTGAGAAAGTGGAG+TGG - chr5_4:36153815-36153834 None:intergenic 50.0%
ATGTCCGGTCATTCCAATCG+TGG - chr5_4:36153851-36153870 None:intergenic 50.0%
CGGACATGCATGATTGACCT+TGG + chr5_4:36153864-36153883 Msa0849390:exon 50.0%
TTGAACCTGAGACCTGGAGG+AGG + chr5_4:36150189-36150208 Msa0849390:intron 55.0%
! GTTTTCCTCCTCCAGGTCTC+AGG - chr5_4:36150197-36150216 None:intergenic 55.0%
!! CCTCAACTGTGGTGTTGGCT+TGG - chr5_4:36150231-36150250 None:intergenic 55.0%
CCAAGCCAACACCACAGTTG+AGG + chr5_4:36150228-36150247 Msa0849390:intron 55.0%
CAGTCCCTCAACTGTGGTGT+TGG - chr5_4:36150236-36150255 None:intergenic 55.0%
!! GTTTCTGGTGGTGGAATGCG+AGG + chr5_4:36150902-36150921 Msa0849390:intron 55.0%
TGGTGGAATGCGAGGTGAGA+TGG + chr5_4:36150910-36150929 Msa0849390:intron 55.0%
GGTGGAATGCGAGGTGAGAT+GGG + chr5_4:36150911-36150930 Msa0849390:intron 55.0%
GTGGAATGCGAGGTGAGATG+GGG + chr5_4:36150912-36150931 Msa0849390:intron 55.0%
TGGAATGCGAGGTGAGATGG+GGG + chr5_4:36150913-36150932 Msa0849390:intron 55.0%
CTTGGCGCACATAGTGGTTC+TGG - chr5_4:36151077-36151096 None:intergenic 55.0%
GAACCACTATGTGCGCCAAG+TGG + chr5_4:36151077-36151096 Msa0849390:intron 55.0%
CTTCCACTTGGCGCACATAG+TGG - chr5_4:36151083-36151102 None:intergenic 55.0%
GGGGAAATCGCAACACTCAC+AGG - chr5_4:36151222-36151241 None:intergenic 55.0%
CTTCACTTGCGCATGCAAGG+GGG - chr5_4:36151241-36151260 None:intergenic 55.0%
CCTTCACTTGCGCATGCAAG+GGG - chr5_4:36151242-36151261 None:intergenic 55.0%
GCCTTCACTTGCGCATGCAA+GGG - chr5_4:36151243-36151262 None:intergenic 55.0%
TGCCTTCACTTGCGCATGCA+AGG - chr5_4:36151244-36151263 None:intergenic 55.0%
GAACGATCACGGACACTCCT+CGG + chr5_4:36151996-36152015 Msa0849390:intron 55.0%
TGTCAGACACGACACGTGTC+CGG - chr5_4:36152040-36152059 None:intergenic 55.0%
GACACGTGTCGTGTCTGACA+CGG + chr5_4:36152040-36152059 Msa0849390:intron 55.0%
GAGGGACACTGAGTACCAGA+GGG - chr5_4:36152250-36152269 None:intergenic 55.0%
ACAAAGGACGGTGGCATAGG+GGG - chr5_4:36152301-36152320 None:intergenic 55.0%
TTTGGGAGGCCTTTAACCCC+TGG + chr5_4:36152854-36152873 Msa0849390:intron 55.0%
TTGGGAGGCCTTTAACCCCT+GGG + chr5_4:36152855-36152874 Msa0849390:intron 55.0%
CGATTTCCCCCAGGGGTTAA+AGG - chr5_4:36152866-36152885 None:intergenic 55.0%
ACCAAGCTCGATTTCCCCCA+GGG - chr5_4:36152874-36152893 None:intergenic 55.0%
TGCAACCAGAAAAGTGGCCC+TGG - chr5_4:36153608-36153627 None:intergenic 55.0%
!!! TGGGAGCGTTTTCCTCCTCC+AGG - chr5_4:36150204-36150223 None:intergenic 60.0%
TGGAGGAGGAAAACGCTCCC+AGG + chr5_4:36150203-36150222 Msa0849390:intron 60.0%
!! GTGGTGTTGGCTTGGGACCT+GGG - chr5_4:36150223-36150242 None:intergenic 60.0%
!! TGTGGTGTTGGCTTGGGACC+TGG - chr5_4:36150224-36150243 None:intergenic 60.0%
GGAATGCGAGGTGAGATGGG+GGG + chr5_4:36150914-36150933 Msa0849390:intron 60.0%
CCCCTTGCATGCGCAAGTGA+AGG + chr5_4:36151239-36151258 Msa0849390:intron 60.0%
! GCGGAGCTTTGGCACACAAC+TGG - chr5_4:36151660-36151679 None:intergenic 60.0%
GGAGGGACACTGAGTACCAG+AGG - chr5_4:36152251-36152270 None:intergenic 60.0%
GGTGGCATAGGGGGATTGGA+GGG - chr5_4:36152292-36152311 None:intergenic 60.0%
! AACGGGCTTGAAGGCCATCG+AGG - chr5_4:36152374-36152393 None:intergenic 60.0%
TGGGAGGCCTTTAACCCCTG+GGG + chr5_4:36152856-36152875 Msa0849390:intron 60.0%
CCAAGCTCGATTTCCCCCAG+GGG - chr5_4:36152873-36152892 None:intergenic 60.0%
GACCAAGCTCGATTTCCCCC+AGG - chr5_4:36152875-36152894 None:intergenic 60.0%
CACGACACGTGTCCGGCACT+GGG - chr5_4:36152033-36152052 None:intergenic 65.0%
ACACGACACGTGTCCGGCAC+TGG - chr5_4:36152034-36152053 None:intergenic 65.0%
CGGTGGCATAGGGGGATTGG+AGG - chr5_4:36152293-36152312 None:intergenic 65.0%
GGACGGTGGCATAGGGGGAT+TGG - chr5_4:36152296-36152315 None:intergenic 65.0%
GGGAGGCCTTTAACCCCTGG+GGG + chr5_4:36152857-36152876 Msa0849390:intron 65.0%
CCCCTGGGGGAAATCGAGCT+TGG + chr5_4:36152870-36152889 Msa0849390:intron 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 36149594 36154215 36149594 ID=Msa0849390;Name=Msa0849390
chr5_4 mRNA 36149594 36154215 36149594 ID=Msa0849390-mRNA-1;Parent=Msa0849390;Name=Msa0849390-mRNA-1;_AED=0.06;_eAED=0.06;_QI=138|0.5|0.66|1|0|0.66|3|339|168
chr5_4 exon 36149594 36149833 36149594 ID=Msa0849390-mRNA-1:exon:12003;Parent=Msa0849390-mRNA-1
chr5_4 exon 36152713 36152849 36152713 ID=Msa0849390-mRNA-1:exon:12004;Parent=Msa0849390-mRNA-1
chr5_4 exon 36153609 36154215 36153609 ID=Msa0849390-mRNA-1:exon:12005;Parent=Msa0849390-mRNA-1
chr5_4 five_prime_UTR 36149594 36149731 36149594 ID=Msa0849390-mRNA-1:five_prime_utr;Parent=Msa0849390-mRNA-1
chr5_4 CDS 36149732 36149833 36149732 ID=Msa0849390-mRNA-1:cds;Parent=Msa0849390-mRNA-1
chr5_4 CDS 36152713 36152849 36152713 ID=Msa0849390-mRNA-1:cds;Parent=Msa0849390-mRNA-1
chr5_4 CDS 36153609 36153876 36153609 ID=Msa0849390-mRNA-1:cds;Parent=Msa0849390-mRNA-1
chr5_4 three_prime_UTR 36153877 36154215 36153877 ID=Msa0849390-mRNA-1:three_prime_utr;Parent=Msa0849390-mRNA-1
Gene Sequence

>Msa0849390

ATGGCAGAGGGAAGAGGTTCTACTCTTGTGCATCTTTTAGTCATTGTTTGTTGCTTAGTTGCATTTGGTTTTGCTGTTGCTGCTGAGAGAAGAAGAAGTGTTGGAACCATTCACACAACTCCAGGAACAAATGAAACATATTGCGTTTACAGTTCAGATGTTGCAACTGGTTATGGAGTGGGTGCTTTCCTATTTCTTCTTTCAGGTGAATCACTGCTTATGGGTGTGACAAAGTGCATGGCCACTTTTCTGGTTGCAGAATCATGCTTAATAGCTGGTGCAAAAAAGAATGCCTATCACACCAAATACCGGGGAATTATTTATGCTCAGAACTTCTCCTGTGAAAGTTTGAGGAAAGGCATCTTCATTACCGGAGCAATTTTCATCGTTGTAACGATGGTTCTTAACGTATACTACTACATGTATTTCACAAAGGCAACCACCACTCCACTTTCTCAGAAGACCAATCGGGTTAGTTCCACGATTGGAATGACCGGACATGCATGA
Protein sequence

>Msa0849390

MAEGRGSTLVHLLVIVCCLVAFGFAVAAERRRSVGTIHTTPGTNETYCVYSSDVATGYGVGAFLFLLSGESLLMGVTKCMATFLVAESCLIAGAKKNAYHTKYRGIIYAQNFSCESLRKGIFITGAIFIVVTMVLNVYYYMYFTKATTTPLSQKTNRVSSTIGMTGHA*