AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0852490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0852490 MtrunA17_Chr5g0428831 92.762 525 18 2 1 515 1 515 0.0 1001
Msa0852490 MtrunA17_Chr1g0195611 88.762 525 38 3 1 515 1 514 0.0 963
Msa0852490 MtrunA17_Chr1g0195641 86.288 423 37 3 1 413 1 412 0.0 733
Msa0852490 MtrunA17_Chr4g0006971 58.300 494 185 5 27 509 27 510 0.0 585
Msa0852490 MtrunA17_Chr7g0242681 59.016 488 176 7 28 502 39 515 0.0 577
Msa0852490 MtrunA17_Chr7g0242691 56.530 513 192 7 19 514 21 519 0.0 576
Msa0852490 MtrunA17_Chr4g0043091 43.651 504 262 8 6 492 7 505 7.62e-150 438
Msa0852490 MtrunA17_Chr4g0033311 43.058 497 240 11 21 489 33 514 7.23e-134 398
Msa0852490 MtrunA17_Chr6g0482131 42.495 513 254 11 6 489 11 511 6.05e-133 395
Msa0852490 MtrunA17_Chr2g0329201 41.211 512 261 10 6 489 7 506 9.35e-132 392
Msa0852490 MtrunA17_Chr2g0329191 41.870 492 252 8 21 489 28 508 1.06e-131 392
Msa0852490 MtrunA17_Chr3g0087261 41.502 506 263 10 9 488 9 507 2.64e-130 389
Msa0852490 MtrunA17_Chr4g0033271 41.651 521 252 13 7 491 8 512 1.03e-129 387
Msa0852490 MtrunA17_Chr3g0088441 42.041 490 255 10 21 489 32 513 2.50e-129 387
Msa0852490 MtrunA17_Chr4g0033331 43.496 492 241 10 22 488 34 513 3.31e-129 386
Msa0852490 MtrunA17_Chr4g0033191 41.803 488 249 9 28 491 44 520 1.17e-128 385
Msa0852490 MtrunA17_Chr4g0033341 42.857 497 237 11 22 489 64 542 1.64e-128 385
Msa0852490 MtrunA17_Chr6g0482081 41.165 515 264 10 3 489 9 512 2.67e-128 384
Msa0852490 MtrunA17_Chr6g0482951 41.954 522 250 13 2 488 7 510 1.49e-127 381
Msa0852490 MtrunA17_Chr2g0317821 39.922 516 264 11 4 491 9 506 1.16e-126 380
Msa0852490 MtrunA17_Chr2g0317841 38.996 518 266 9 4 491 9 506 3.18e-126 379
Msa0852490 MtrunA17_Chr4g0033321 43.443 488 235 10 28 488 34 507 3.76e-126 378
Msa0852490 MtrunA17_Chr6g0482941 41.300 523 252 12 2 488 7 510 3.87e-126 378
Msa0852490 MtrunA17_Chr4g0033201 40.194 515 262 10 10 489 8 511 9.71e-126 377
Msa0852490 MtrunA17_Chr4g0042171 40.000 510 282 9 8 500 8 510 1.85e-125 376
Msa0852490 MtrunA17_Chr4g0033401 43.238 488 236 10 28 488 35 508 1.15e-124 374
Msa0852490 MtrunA17_Chr6g0482071 40.381 525 252 13 9 494 15 517 1.32e-124 374
Msa0852490 MtrunA17_Chr3g0090131 41.116 484 241 10 28 489 22 483 2.91e-123 370
Msa0852490 MtrunA17_Chr4g0010501 41.339 508 249 11 7 489 10 493 6.39e-123 369
Msa0852490 MtrunA17_Chr3g0087271 41.372 481 255 8 26 488 37 508 3.20e-120 363
Msa0852490 MtrunA17_Chr3g0090111 39.837 492 235 10 28 489 20 480 1.19e-119 360
Msa0852490 MtrunA17_Chr2g0329321 39.634 492 238 9 21 489 32 487 2.17e-117 355
Msa0852490 MtrunA17_Chr2g0288071 37.209 516 284 11 7 495 45 547 9.61e-115 350
Msa0852490 MtrunA17_Chr4g0033231 39.754 488 229 10 29 489 43 492 2.10e-114 347
Msa0852490 MtrunA17_Chr4g0074561 37.525 493 274 10 32 500 40 522 2.96e-114 348
Msa0852490 MtrunA17_Chr4g0074551 37.911 517 279 12 7 496 29 530 1.49e-113 347
Msa0852490 MtrunA17_Chr4g0033261 39.228 492 228 9 28 489 42 492 3.59e-112 341
Msa0852490 MtrunA17_Chr2g0288021 37.870 507 276 10 7 488 15 507 6.09e-112 342
Msa0852490 MtrunA17_Chr5g0430451 38.095 504 246 11 17 489 29 497 1.61e-104 322
Msa0852490 MtrunA17_Chr5g0418871 47.633 338 152 5 46 368 2 329 2.41e-104 316
Msa0852490 MtrunA17_Chr4g0006131 34.879 496 257 7 28 492 43 503 1.62e-96 301
Msa0852490 MtrunA17_Chr4g0006111 36.078 510 252 13 18 489 51 524 1.87e-96 302
Msa0852490 MtrunA17_Chr7g0234131 37.474 475 265 10 28 488 76 532 1.64e-91 289
Msa0852490 MtrunA17_Chr7g0234111 37.447 470 271 9 28 488 76 531 1.40e-90 287
Msa0852490 MtrunA17_Chr7g0234091 37.317 477 262 11 28 488 76 531 2.17e-89 284
Msa0852490 MtrunA17_Chr2g0301231 36.967 422 211 10 92 489 1 391 1.95e-83 264
Msa0852490 MtrunA17_Chr7g0230651 36.207 348 207 7 87 429 34 371 1.46e-73 238
Msa0852490 MtrunA17_Chr3g0087201 39.039 333 186 6 166 488 17 342 3.83e-72 233
Msa0852490 MtrunA17_Chr7g0236731 39.689 257 136 5 114 358 31 280 1.66e-50 174
Msa0852490 MtrunA17_Chr7g0227561 33.692 279 136 8 29 297 48 287 3.84e-46 163
Msa0852490 MtrunA17_Chr3g0087191 50.000 172 64 4 9 165 1 165 9.70e-46 157
Msa0852490 MtrunA17_Chr1g0195651 93.506 77 5 0 439 515 1 77 3.08e-44 150
Msa0852490 MtrunA17_Chr8g0352881 45.714 105 57 0 248 352 56 160 5.81e-25 101
Msa0852490 MtrunA17_Chr8g0352881 81.818 33 6 0 35 67 6 38 4.01e-11 61.6
Msa0852490 MtrunA17_Chr4g0068871 24.390 410 245 10 86 488 181 532 1.87e-19 91.7
Msa0852490 MtrunA17_Chr5g0418861 48.684 76 37 2 414 488 16 90 9.73e-18 78.2
Msa0852490 MtrunA17_Chr2g0288031 46.774 62 31 1 174 235 4 63 2.88e-13 64.7
Msa0852490 MtrunA17_Chr7g0227591 51.852 54 25 1 435 488 13 65 2.75e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0852490 AT1G02850.2 61.216 477 169 4 22 491 21 488 0.0 612
Msa0852490 AT1G02850.5 58.400 500 169 5 22 491 21 511 0.0 600
Msa0852490 AT1G02850.4 58.283 501 169 6 22 491 21 512 0.0 596
Msa0852490 AT1G02850.1 58.281 477 156 5 22 491 21 461 0.0 568
Msa0852490 AT4G22100.1 53.892 501 209 9 6 497 4 491 0.0 531
Msa0852490 AT4G27830.1 52.495 501 200 9 9 491 7 487 0.0 528
Msa0852490 AT1G45191.4 53.213 498 217 8 5 497 6 492 0.0 524
Msa0852490 AT1G60090.2 52.475 505 209 7 7 497 4 491 0.0 520
Msa0852490 AT1G60090.1 51.657 513 208 8 7 497 4 498 2.73e-180 516
Msa0852490 AT1G45191.2 52.505 499 225 8 5 497 6 498 2.16e-179 514
Msa0852490 AT1G45191.1 51.462 513 226 7 5 497 6 515 2.24e-179 514
Msa0852490 AT1G45191.6 51.984 504 225 8 5 497 6 503 1.13e-178 512
Msa0852490 AT1G02850.3 57.767 412 136 4 22 403 21 424 3.05e-174 498
Msa0852490 AT4G27820.1 51.967 483 200 7 24 491 20 485 7.67e-174 499
Msa0852490 AT3G62750.1 49.699 499 207 9 11 491 4 476 1.61e-165 478
Msa0852490 AT3G62750.2 49.699 499 207 9 11 491 30 502 4.58e-165 478
Msa0852490 AT4G27830.2 54.680 406 171 5 92 491 1 399 1.28e-160 463
Msa0852490 AT3G62740.1 47.677 495 225 9 11 491 7 481 4.45e-159 462
Msa0852490 AT4G27820.2 53.580 405 178 5 92 491 1 400 4.07e-152 441
Msa0852490 AT4G27820.3 53.580 405 178 5 92 491 1 400 4.07e-152 441
Msa0852490 AT1G26560.1 43.633 479 253 7 28 491 33 509 4.28e-140 414
Msa0852490 AT3G62750.6 50.370 405 182 6 92 491 1 391 9.02e-140 409
Msa0852490 AT3G62750.5 50.370 405 182 6 92 491 1 391 9.02e-140 409
Msa0852490 AT3G62750.4 48.423 444 185 8 11 436 30 447 2.98e-138 407
Msa0852490 AT1G45191.3 55.710 359 149 6 5 359 6 358 2.31e-137 403
Msa0852490 AT1G45191.5 55.710 359 149 6 5 359 6 358 2.45e-137 403
Msa0852490 AT3G18080.1 43.210 486 247 8 22 489 34 508 2.16e-134 399
Msa0852490 AT1G60270.1 51.000 400 160 8 1 385 1 379 2.34e-133 392
Msa0852490 AT3G62740.2 46.453 437 200 9 11 433 7 423 2.12e-132 391
Msa0852490 AT2G44480.1 42.626 495 236 10 29 493 37 513 1.73e-131 392
Msa0852490 AT2G44480.3 42.626 495 236 10 29 493 68 544 3.14e-131 392
Msa0852490 AT5G54570.1 41.718 489 255 9 22 488 25 505 4.84e-127 381
Msa0852490 AT3G18070.3 41.529 484 250 9 22 489 25 491 1.90e-124 373
Msa0852490 AT3G62750.7 50.404 371 146 5 11 365 4 352 1.11e-123 367
Msa0852490 AT3G62750.8 50.404 371 146 5 11 365 4 352 1.11e-123 367
Msa0852490 AT3G18070.1 41.529 484 256 9 22 489 25 497 2.29e-123 370
Msa0852490 AT5G44640.1 40.434 507 266 10 7 488 6 501 2.58e-123 371
Msa0852490 AT2G44450.1 42.159 491 254 9 17 488 21 500 6.48e-123 370
Msa0852490 AT3G62750.3 49.867 375 150 5 11 369 30 382 8.54e-123 367
Msa0852490 AT5G42260.1 40.557 503 263 10 7 484 6 497 1.80e-121 366
Msa0852490 AT2G25630.1 40.476 504 261 10 8 494 8 489 3.94e-120 362
Msa0852490 AT5G36890.1 40.400 500 250 11 14 490 7 481 1.63e-116 353
Msa0852490 AT5G36890.2 40.400 500 250 11 14 490 7 481 2.09e-116 352
Msa0852490 AT1G61820.1 38.596 513 266 11 10 489 9 505 2.23e-116 353
Msa0852490 AT3G60130.1 41.152 486 249 11 29 491 32 503 1.42e-115 351
Msa0852490 AT5G54570.2 43.099 413 214 7 92 488 1 408 4.98e-114 344
Msa0852490 AT2G44480.2 41.943 422 214 7 92 493 1 411 2.35e-113 342
Msa0852490 AT1G61810.1 38.737 475 270 8 32 489 38 508 2.22e-112 343
Msa0852490 AT1G60270.2 54.515 299 124 5 92 385 1 292 7.43e-112 333
Msa0852490 AT5G24550.1 39.759 498 256 13 22 489 27 510 1.72e-111 341
Msa0852490 AT5G54570.3 41.475 434 226 7 22 434 25 451 1.89e-111 338
Msa0852490 AT3G60140.1 37.426 505 287 13 9 491 8 505 6.37e-110 338
Msa0852490 AT5G25980.2 39.122 501 266 13 16 491 39 525 1.73e-107 331
Msa0852490 AT1G61810.3 38.852 453 258 7 32 467 38 488 3.48e-107 330
Msa0852490 AT2G44470.3 39.085 481 266 9 29 488 31 505 1.23e-106 330
Msa0852490 AT3G60120.1 38.477 486 271 12 25 489 12 490 2.29e-105 326
Msa0852490 AT4G21760.2 36.382 492 259 8 32 493 59 526 4.98e-105 325
Msa0852490 AT5G26000.1 36.542 509 291 8 5 491 16 514 6.75e-105 324
Msa0852490 AT4G21760.1 36.786 473 273 6 32 493 59 516 1.06e-104 324
Msa0852490 AT1G51470.1 38.075 478 275 10 23 488 41 509 1.08e-104 323
Msa0852490 AT1G47600.2 38.351 485 263 13 23 488 41 508 1.95e-103 320
Msa0852490 AT1G47600.1 37.866 478 276 10 23 488 41 509 2.26e-103 320
Msa0852490 AT2G44490.1 37.910 488 266 12 29 489 16 493 3.38e-103 321
Msa0852490 AT5G24540.1 39.357 498 258 13 22 489 27 510 5.71e-103 319
Msa0852490 AT2G32860.2 38.821 492 253 15 29 488 96 571 3.48e-101 317
Msa0852490 AT2G44480.4 50.000 312 134 6 22 321 62 363 1.65e-100 308
Msa0852490 AT2G32860.1 37.931 493 255 14 29 488 96 570 2.31e-100 315
Msa0852490 AT3G60130.3 41.346 416 223 9 84 491 38 440 3.46e-100 309
Msa0852490 AT3G03640.1 38.067 507 287 12 23 507 30 531 1.53e-99 310
Msa0852490 AT2G44460.1 38.031 518 277 15 1 488 1 504 3.77e-99 311
Msa0852490 AT1G61810.5 39.320 412 232 7 92 489 1 408 1.02e-98 305
Msa0852490 AT3G60130.2 40.047 422 231 9 84 491 38 451 5.85e-98 304
Msa0852490 AT1G75940.1 38.247 502 258 16 23 488 32 517 2.11e-97 305
Msa0852490 AT1G52400.3 37.126 501 272 13 18 489 30 516 2.84e-97 304
Msa0852490 AT1G52400.1 37.126 501 272 13 18 489 30 516 2.84e-97 304
Msa0852490 AT5G28510.1 36.914 512 275 15 24 501 36 533 1.87e-96 302
Msa0852490 AT1G66270.1 37.721 509 271 13 23 501 32 524 2.73e-95 299
Msa0852490 AT3G09260.1 36.884 507 277 15 24 501 32 524 1.85e-94 297
Msa0852490 AT1G66280.1 35.860 541 288 16 1 501 3 524 2.29e-94 296
Msa0852490 AT3G60140.2 38.499 413 232 10 9 405 8 414 3.76e-94 294
Msa0852490 AT3G18070.4 45.511 323 170 3 22 342 25 343 3.87e-94 291
Msa0852490 AT3G21370.1 36.614 508 278 16 23 499 29 523 7.49e-94 295
Msa0852490 AT5G26000.2 37.020 443 248 7 5 426 16 448 4.76e-92 288
Msa0852490 AT5G25980.3 38.375 443 235 12 16 434 39 467 8.45e-92 288
Msa0852490 AT5G25980.1 38.375 443 235 12 16 434 39 467 8.45e-92 288
Msa0852490 AT1G66270.2 37.328 509 271 14 23 501 32 522 1.05e-91 290
Msa0852490 AT2G44470.1 38.118 425 238 7 29 433 31 450 4.21e-89 281
Msa0852490 AT1G61810.4 38.860 386 222 6 32 405 38 421 8.15e-89 279
Msa0852490 AT2G44470.2 44.872 312 166 4 29 335 31 341 1.19e-88 278
Msa0852490 AT5G24540.2 39.171 434 222 11 22 426 27 447 1.08e-86 275
Msa0852490 AT5G48375.1 37.054 448 196 10 23 453 34 412 2.36e-86 273
Msa0852490 AT1G61820.3 38.172 372 203 7 136 489 4 366 1.53e-83 264
Msa0852490 AT5G16580.1 47.811 297 134 7 160 444 12 299 2.11e-81 256
Msa0852490 AT1G52400.2 37.592 407 219 10 19 403 31 424 9.38e-78 251
Msa0852490 AT2G44450.2 38.810 353 205 6 143 488 1 349 2.35e-77 247
Msa0852490 AT3G18070.2 39.286 336 181 7 168 489 94 420 3.02e-75 244
Msa0852490 AT1G61810.2 42.966 263 144 3 32 290 38 298 9.35e-73 234
Msa0852490 AT3G18070.7 38.608 316 171 7 188 489 2 308 4.05e-69 224
Msa0852490 AT1G51490.1 41.290 310 159 10 35 336 28 322 4.53e-61 206
Msa0852490 AT2G44460.2 37.363 364 206 10 141 488 1 358 7.40e-61 206
Msa0852490 AT2G44480.5 34.906 318 178 6 194 493 1 307 9.25e-60 200
Msa0852490 AT3G18070.5 37.165 261 141 6 154 403 85 333 2.75e-49 173
Msa0852490 AT3G18070.6 37.004 227 125 5 188 403 2 221 2.93e-43 154
Msa0852490 AT3G06510.2 25.467 428 260 17 86 492 158 547 1.30e-17 86.7
Msa0852490 AT3G06510.1 24.096 415 248 13 86 492 158 513 4.67e-17 84.7

Find 149 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAACATTCAAGACCCTTTA+TGG 0.120459 5_4:+43551659 Msa0852490:CDS
GCAAGTCATCTTTGGTTTCT+AGG 0.204267 5_4:+43552873 Msa0852490:three_prime_UTR
TGCGCCCGCATTTGTCTTCA+TGG 0.214197 5_4:-43551093 None:intergenic
AAGGGTTCCTATGACTTTAT+TGG 0.240240 5_4:+43551155 Msa0852490:CDS
GTCAGGCACCTCTGCTTATC+AGG 0.248063 5_4:+43549158 Msa0852490:CDS
GGTATCTCAATCTATGCATT+TGG 0.257425 5_4:+43550888 Msa0852490:CDS
CCTATATTCATTCATGAAAA+TGG 0.260858 5_4:+43551689 Msa0852490:CDS
CCATTCACACCATGGGCTTT+AGG 0.272582 5_4:+43551626 Msa0852490:CDS
TGGTATCTAGTTCTTCGATT+TGG 0.285160 5_4:+43552719 Msa0852490:three_prime_UTR
TGCTTGTAAACTTGGCTGTT+GGG 0.303688 5_4:+43549079 Msa0852490:CDS
TCTTTCTCTGTATTTGTTTG+AGG 0.304065 5_4:-43550918 None:intergenic
CATTGATGCATTTGAGTTGT+TGG 0.312270 5_4:+43552303 Msa0852490:CDS
AAACAAATACAGAGAAAGAT+AGG 0.312442 5_4:+43550922 Msa0852490:CDS
GGTATCTAGTTCTTCGATTT+GGG 0.314140 5_4:+43552720 Msa0852490:three_prime_UTR
GATGGATATGAATCGGTCTA+TGG 0.315913 5_4:+43552325 Msa0852490:CDS
CGCATTTGTCTTCATGGAAT+CGG 0.325615 5_4:-43551087 None:intergenic
TTCCAGATGCAAGTCATCTT+TGG 0.343118 5_4:+43552865 Msa0852490:three_prime_UTR
ATGGAAGAACTCCTAGCATT+TGG 0.343887 5_4:+43549311 Msa0852490:CDS
ACTACCTACAGCGAAGATAT+TGG 0.346387 5_4:-43550591 None:intergenic
TTTCTTTGTGCTTGTAAACT+TGG 0.355444 5_4:+43549071 Msa0852490:CDS
CTCATCATTTGAACCGTACT+TGG 0.358902 5_4:+43550685 Msa0852490:CDS
TAACGATTCATCACTTGTTT+CGG 0.364770 5_4:+43552468 Msa0852490:CDS
GCGTGAATCCGAACAAGTTA+AGG 0.366298 5_4:+43551136 Msa0852490:CDS
GTGCTCTCTATAACGCAAAA+TGG 0.368541 5_4:-43550653 None:intergenic
TGTAATACTGCAATCCCTTC+GGG 0.375393 5_4:-43549914 None:intergenic
GCACCGTGCTTGATTCCTTA+AGG 0.375685 5_4:+43552068 Msa0852490:CDS
ATATAGGTGGATTGCCATAA+AGG 0.386167 5_4:-43551673 None:intergenic
TTGTAATACTGCAATCCCTT+CGG 0.391155 5_4:-43549915 None:intergenic
GGGTTTGCGCGTGGAGGAAA+TGG 0.393149 5_4:+43549570 Msa0852490:CDS
GTATCTCAATCTATGCATTT+GGG 0.394173 5_4:+43550889 Msa0852490:CDS
ACCCAAAGCTATCCGCAAAA+TGG 0.396995 5_4:+43552389 Msa0852490:CDS
CTACCTACAGCGAAGATATT+GGG 0.398761 5_4:-43550590 None:intergenic
GTGCTTGTAAACTTGGCTGT+TGG 0.408293 5_4:+43549078 Msa0852490:CDS
CCTAAAGCCCATGGTGTGAA+TGG 0.412475 5_4:-43551626 None:intergenic
ATAGGAACCCTTAACTTGTT+CGG 0.417408 5_4:-43551144 None:intergenic
TGGAAGAACTCCTAGCATTT+GGG 0.419701 5_4:+43549312 Msa0852490:CDS
ATCAATGAACTCATTAGAAA+TGG 0.421066 5_4:+43549945 Msa0852490:CDS
GTGCAACTCATGGTTGAAAC+AGG 0.425812 5_4:+43549709 Msa0852490:CDS
AATTATGCCAATAAAGTCAT+AGG 0.425994 5_4:-43551162 None:intergenic
CTTATGTGGTTGCAAAGGTT+GGG 0.428005 5_4:+43553001 Msa0852490:three_prime_UTR
TCTTATGTGGTTGCAAAGGT+TGG 0.429923 5_4:+43553000 Msa0852490:three_prime_UTR
TGCATACACACATGGAATAG+TGG 0.431180 5_4:-43552663 None:intergenic
TATCAATCTTGACCAAGAAA+TGG 0.432438 5_4:-43549752 None:intergenic
CCAAGAAATGGAAAACCTAT+AGG 0.435313 5_4:-43549740 None:intergenic
CATCTTAACAAATTCTTATG+TGG 0.439355 5_4:+43552987 Msa0852490:three_prime_UTR
GAGGAACAGAATGGATTTGT+TGG 0.439555 5_4:+43550867 Msa0852490:CDS
TCGCAGAGTTCACACATAGA+TGG 0.439884 5_4:-43552931 None:intergenic
TTTGTCGGTTAGCTGGTTAG+TGG 0.440385 5_4:+43552583 Msa0852490:three_prime_UTR
TGAGTTCAATTGCACTAACT+AGG 0.448909 5_4:-43552444 None:intergenic
GTATTCATGACTAACTCTAA+TGG 0.448967 5_4:+43552785 Msa0852490:three_prime_UTR
TGTGTATGCAATCATCATAA+AGG 0.449968 5_4:+43552676 Msa0852490:three_prime_UTR
AAACAGGCCTCGATGCCTAT+AGG 0.452796 5_4:+43549725 Msa0852490:CDS
AACCAAAGATGACTTGCATC+TGG 0.453002 5_4:-43552867 None:intergenic
CTGCAATCCCTTCGGGTTGA+CGG 0.453207 5_4:-43549907 None:intergenic
CGTGAATCCGAACAAGTTAA+GGG 0.454889 5_4:+43551137 Msa0852490:CDS
TGCAATCCCTTCGGGTTGAC+GGG 0.464498 5_4:-43549906 None:intergenic
GCATTTGTCTTCATGGAATC+GGG 0.464992 5_4:-43551086 None:intergenic
TGCAATGAAATCTCGCAGTT+CGG 0.466615 5_4:-43551231 None:intergenic
CACTCCACCATGATGAATCA+AGG 0.468329 5_4:+43552020 Msa0852490:CDS
GAAAGTGAGACTATAGTTCA+TGG 0.471304 5_4:+43553023 Msa0852490:three_prime_UTR
TGGGATACCTTTGCACATGC+TGG 0.477610 5_4:+43549331 Msa0852490:CDS
CAGAAATGGATCAAATATGA+AGG 0.478384 5_4:+43552261 Msa0852490:intron
TATTCCTTCCTAGATGGTAG+AGG 0.481718 5_4:+43549882 Msa0852490:intron
ATTTCACCCTTGATTCATCA+TGG 0.487396 5_4:-43552027 None:intergenic
TTTGGGTATCTTCTCAACTC+TGG 0.491607 5_4:-43552373 None:intergenic
AGAATTTGTTAAGATGTCTC+AGG 0.491942 5_4:-43552980 None:intergenic
TATAGGTGGATTGCCATAAA+GGG 0.493904 5_4:-43551672 None:intergenic
GGTGTAGTGTGACATGTGGT+TGG 0.496300 5_4:-43550104 None:intergenic
GTGTATGCAATCATCATAAA+GGG 0.498936 5_4:+43552677 Msa0852490:three_prime_UTR
CTAAAGCCCATGGTGTGAAT+GGG 0.501551 5_4:-43551625 None:intergenic
GCTTGTAAACTTGGCTGTTG+GGG 0.502493 5_4:+43549080 Msa0852490:CDS
TGGAGATTTACTTCAGTAGT+GGG 0.503234 5_4:+43552492 Msa0852490:exon
TTGGAGATTTACTTCAGTAG+TGG 0.506966 5_4:+43552491 Msa0852490:CDS
GAAGGAGGTGCTAATGAAGA+TGG 0.507075 5_4:+43549292 Msa0852490:CDS
GAGTTCAATTGCACTAACTA+GGG 0.507474 5_4:-43552443 None:intergenic
ATGGGCTTTAGGAGAAGTGC+TGG 0.509453 5_4:+43551637 Msa0852490:CDS
GATTCATCACTTGTTTCGGT+TGG 0.518430 5_4:+43552472 Msa0852490:CDS
AAATTCTTATGTGGTTGCAA+AGG 0.524870 5_4:+43552996 Msa0852490:three_prime_UTR
GCCATAAAGAAAAGACAGGT+TGG 0.527833 5_4:-43552819 None:intergenic
GATTCCATGAAGACAAATGC+GGG 0.529328 5_4:+43551089 Msa0852490:CDS
AAATACTTGCATGGATACAT+TGG 0.532639 5_4:+43552046 Msa0852490:CDS
GACTGTATAGAAGAAAGTAC+AGG 0.535180 5_4:+43550747 Msa0852490:CDS
GGAGGAGAACATCGCTTAGG+TGG 0.541420 5_4:-43550632 None:intergenic
TGATCTCCCACAGGCGCTTG+AGG 0.541432 5_4:+43550131 Msa0852490:CDS
AACAAATACAGAGAAAGATA+GGG 0.545909 5_4:+43550923 Msa0852490:CDS
ATGGATATGAATCGGTCTAT+GGG 0.551795 5_4:+43552326 Msa0852490:CDS
TTCGGATTCACGCCTTGTGA+AGG 0.553463 5_4:-43551126 None:intergenic
CAAGAATTCCTTCCTTCACA+AGG 0.554028 5_4:+43551114 Msa0852490:CDS
ATTATGGAACCCTTGTTGCA+TGG 0.555652 5_4:+43551056 Msa0852490:CDS
GATGCATTTGAGTTGTTGGA+TGG 0.557277 5_4:+43552307 Msa0852490:CDS
TCGGGGATAGAGTCAAGTAT+TGG 0.557281 5_4:+43550552 Msa0852490:CDS
GACATGGCTGCAAAGCCACT+TGG 0.557948 5_4:+43551254 Msa0852490:CDS
ATATGATGAACTACCAAGTA+CGG 0.560828 5_4:-43550698 None:intergenic
GAGGAGAACATCGCTTAGGT+GGG 0.566104 5_4:-43550631 None:intergenic
GCTGTAGGTAGTTATGATCA+AGG 0.568860 5_4:+43550602 Msa0852490:CDS
TTCAAATGATGAGTTGCCCT+TGG 0.569002 5_4:-43550675 None:intergenic
AATGGAGGAGAACATCGCTT+AGG 0.573473 5_4:-43550635 None:intergenic
GCGCTTGAGGATGAATATGA+AGG 0.575988 5_4:+43550144 Msa0852490:CDS
TATTCATCCTCAAGCGCCTG+TGG 0.575997 5_4:-43550138 None:intergenic
CTCAGTACCCATTCACACCA+TGG 0.576987 5_4:+43551618 Msa0852490:intron
ATGTGTTGCTTAGTGTCCGT+TGG 0.581887 5_4:-43551997 None:intergenic
GCGAGATTTCATTGCAGACA+TGG 0.583357 5_4:+43551238 Msa0852490:CDS
GTTGTTGGATGGATATGAAT+CGG 0.583707 5_4:+43552318 Msa0852490:CDS
ACAAGAGTCAAACATGTATG+TGG 0.586083 5_4:-43549048 None:intergenic
GATTCACGCCTTGTGAAGGA+AGG 0.587877 5_4:-43551122 None:intergenic
GGGATAGTCTCCATGCAACA+AGG 0.588890 5_4:-43551066 None:intergenic
CTTTCTTCTATACAGTCTCA+CGG 0.589717 5_4:-43550741 None:intergenic
TGTTTGAATTGTTAGGCCAA+CGG 0.590244 5_4:+43551981 Msa0852490:intron
GCGCCTGTGGGAGATCATAG+TGG 0.591786 5_4:-43550125 None:intergenic
TGCGTTATAGAGAGCACCAA+GGG 0.593098 5_4:+43550659 Msa0852490:CDS
AGAAATGGATCAAATATGAA+GGG 0.593438 5_4:+43552262 Msa0852490:intron
AGTAGAAGACAACACCGACT+TGG 0.594147 5_4:-43548930 None:intergenic
GCAAAGGTATCCCAAATGCT+AGG 0.604783 5_4:-43549322 None:intergenic
AGCACTTCTCCTAAAGCCCA+TGG 0.604980 5_4:-43551635 None:intergenic
AAAGAGAACCTGATAAGCAG+AGG 0.605796 5_4:-43549166 None:intergenic
ATGGGCTATACTATGTCGAT+AGG 0.606283 5_4:+43552344 Msa0852490:CDS
TCAGTACCCATTCACACCAT+GGG 0.607004 5_4:+43551619 Msa0852490:intron
ATTCATCCTCAAGCGCCTGT+GGG 0.609211 5_4:-43550137 None:intergenic
TCAAGGGTGAAATACTTGCA+TGG 0.610483 5_4:+43552037 Msa0852490:CDS
GAGCCCAATATCTTCGCTGT+AGG 0.611798 5_4:+43550587 Msa0852490:CDS
AGAAGACAACACCGACTTGG+TGG 0.612994 5_4:-43548927 None:intergenic
ACTCCACCATGATGAATCAA+GGG 0.620182 5_4:+43552021 Msa0852490:CDS
ATGATGATTGCATACACACA+TGG 0.621249 5_4:-43552671 None:intergenic
ACATTGCAGGAGGAACAGAA+TGG 0.621950 5_4:+43550858 Msa0852490:intron
CTCTCTATAACGCAAAATGG+AGG 0.625836 5_4:-43550650 None:intergenic
TAGAGGACCCGTCAACCCGA+AGG 0.628663 5_4:+43549899 Msa0852490:CDS
TGTGATTATGAATAGGTGGA+AGG 0.629840 5_4:+43549274 Msa0852490:intron
TTGAGGATGAATATGAAGGA+TGG 0.630697 5_4:+43550148 Msa0852490:CDS
TGACTAACCAGCATGTGCAA+AGG 0.633306 5_4:-43549338 None:intergenic
TGAAGGATGGCTTAGTCGTG+AGG 0.633525 5_4:+43550161 Msa0852490:CDS
AGAGGACCCGTCAACCCGAA+GGG 0.637162 5_4:+43549900 Msa0852490:CDS
GCAGGAAGATGTGCAACTCA+TGG 0.640503 5_4:+43549699 Msa0852490:intron
TTCAATTGCACTAACTAGGG+AGG 0.641043 5_4:-43552440 None:intergenic
TCACCCTTGATTCATCATGG+TGG 0.655240 5_4:-43552024 None:intergenic
GAGGTTCTTTGAGAAATCTG+AGG 0.657768 5_4:+43552763 Msa0852490:three_prime_UTR
CATGTGCATACGAGAATGTG+AGG 0.659457 5_4:+43552744 Msa0852490:three_prime_UTR
ACACCACTATGATCTCCCAC+AGG 0.659551 5_4:+43550122 Msa0852490:CDS
GATTATGAATAGGTGGAAGG+AGG 0.662848 5_4:+43549277 Msa0852490:intron
CGATTCCATGAAGACAAATG+CGG 0.665797 5_4:+43551088 Msa0852490:CDS
GAGTGATCTCACATTAACAA+TGG 0.668911 5_4:+43552699 Msa0852490:three_prime_UTR
ACTGTATAGAAGAAAGTACA+GGG 0.680515 5_4:+43550748 Msa0852490:CDS
GGAAATATTTGTAGAGAACG+AGG 0.688144 5_4:+43551504 Msa0852490:CDS
ATGAGCTAGAACCACCAAGT+CGG 0.688621 5_4:+43548916 Msa0852490:five_prime_UTR
ATACCTTAAGGAATCAAGCA+CGG 0.705643 5_4:-43552071 None:intergenic
AGGAGAACATCGCTTAGGTG+GGG 0.706730 5_4:-43550630 None:intergenic
TGGAAAACCTATAGGCATCG+AGG 0.710598 5_4:-43549732 None:intergenic
GGATAGTCTCCATGCAACAA+GGG 0.717007 5_4:-43551065 None:intergenic
TAGTGGTGTAGTGTGACATG+TGG 0.717646 5_4:-43550108 None:intergenic
TTGCGTTATAGAGAGCACCA+AGG 0.721533 5_4:+43550658 Msa0852490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTCAAAAGATAATAAAA+TGG - chr5_4:43552109-43552128 None:intergenic 10.0%
!!! TGTTTTTGAAATCTTAATTA+AGG - chr5_4:43550020-43550039 None:intergenic 15.0%
!! AAAAACATAAACATAGAAGA+TGG + chr5_4:43549023-43549042 Msa0852490:intron 20.0%
!! TTCTAAATAATGAAATTGCA+TGG - chr5_4:43549215-43549234 None:intergenic 20.0%
!!! ACTAGCATTTTTATACAAAA+AGG + chr5_4:43549549-43549568 Msa0852490:CDS 20.0%
!!! CTAGCATTTTTATACAAAAA+GGG + chr5_4:43549550-43549569 Msa0852490:CDS 20.0%
!!! TTTTTTTTATCCTTCAGAAA+TGG + chr5_4:43552247-43552266 Msa0852490:intron 20.0%
!! AAAAACTTATAATAGAGAAG+TGG + chr5_4:43552842-43552861 Msa0852490:three_prime_UTR 20.0%
! ATATTCCAAACATGATAAGA+TGG - chr5_4:43549378-43549397 None:intergenic 25.0%
!! TCTATCTTTCTAATTTTGTC+TGG + chr5_4:43549646-43549665 Msa0852490:intron 25.0%
!! TTTAAGTTCAGTAGAATACT+TGG - chr5_4:43549778-43549797 None:intergenic 25.0%
! TTAGTACATATCGATATGAA+TGG + chr5_4:43549800-43549819 Msa0852490:intron 25.0%
!!! GGAATAAAAGCATTTTCAAA+GGG - chr5_4:43549868-43549887 None:intergenic 25.0%
!!! AGGAATAAAAGCATTTTCAA+AGG - chr5_4:43549869-43549888 None:intergenic 25.0%
! ATCAATGAACTCATTAGAAA+TGG + chr5_4:43549945-43549964 Msa0852490:CDS 25.0%
! AATTCATAGTGCATGAAATA+AGG + chr5_4:43550242-43550261 Msa0852490:intron 25.0%
!!! AAAAAGTACTTTTTGTGCTT+AGG + chr5_4:43550423-43550442 Msa0852490:intron 25.0%
!!! CTTACATTGCATTTTTTTGA+CGG + chr5_4:43550456-43550475 Msa0852490:intron 25.0%
! CACAGTATGAAAAAAGATAA+GGG - chr5_4:43550779-43550798 None:intergenic 25.0%
! ACACAGTATGAAAAAAGATA+AGG - chr5_4:43550780-43550799 None:intergenic 25.0%
! AAACAAATACAGAGAAAGAT+AGG + chr5_4:43550922-43550941 Msa0852490:CDS 25.0%
! AACAAATACAGAGAAAGATA+GGG + chr5_4:43550923-43550942 Msa0852490:CDS 25.0%
! AATTATGCCAATAAAGTCAT+AGG - chr5_4:43551165-43551184 None:intergenic 25.0%
! TGTATCACTAGTTGAATAAT+TGG + chr5_4:43551431-43551450 Msa0852490:intron 25.0%
!!! AATCATTTCTTTGTTTTCTG+TGG + chr5_4:43551466-43551485 Msa0852490:intron 25.0%
!! TTTTCATGAATGAATATAGG+TGG - chr5_4:43551689-43551708 None:intergenic 25.0%
!! CCATTTTCATGAATGAATAT+AGG - chr5_4:43551692-43551711 None:intergenic 25.0%
! CCTATATTCATTCATGAAAA+TGG + chr5_4:43551689-43551708 Msa0852490:CDS 25.0%
! AACCTAGTCAAAATGTTATT+TGG - chr5_4:43551810-43551829 None:intergenic 25.0%
! TTTACAATTCCATACAATTG+AGG - chr5_4:43551865-43551884 None:intergenic 25.0%
! AATTGTAAACTTAAGCATCA+AGG + chr5_4:43551876-43551895 Msa0852490:intron 25.0%
! ATTGTAAACTTAAGCATCAA+GGG + chr5_4:43551877-43551896 Msa0852490:intron 25.0%
! ATATTTACAAGCGTTATGAA+TGG - chr5_4:43551924-43551943 None:intergenic 25.0%
! TTCCAATTGTTTGAATTGTT+AGG + chr5_4:43551974-43551993 Msa0852490:intron 25.0%
!! TTAGGACTGTTTTCATTTAT+TGG - chr5_4:43552169-43552188 None:intergenic 25.0%
! TTTATTTCAGTTGTGTGTTT+AGG - chr5_4:43552187-43552206 None:intergenic 25.0%
! AGAAATGGATCAAATATGAA+GGG + chr5_4:43552262-43552281 Msa0852490:intron 25.0%
!!! TAACTCTAATGGTTCTTTTT+TGG + chr5_4:43552796-43552815 Msa0852490:three_prime_UTR 25.0%
! CATCTTAACAAATTCTTATG+TGG + chr5_4:43552987-43553006 Msa0852490:three_prime_UTR 25.0%
TCACACACACTTCTTAAAAA+TGG + chr5_4:43548952-43548971 Msa0852490:five_prime_UTR 30.0%
TTTCTTTGTGCTTGTAAACT+TGG + chr5_4:43549071-43549090 Msa0852490:CDS 30.0%
! TTGCATGGTTACTTCTTTTT+GGG - chr5_4:43549200-43549219 None:intergenic 30.0%
! ATTGCATGGTTACTTCTTTT+TGG - chr5_4:43549201-43549220 None:intergenic 30.0%
CTTGTGTTGTGATTATGAAT+AGG + chr5_4:43549267-43549286 Msa0852490:intron 30.0%
ATCATCCATCTTATCATGTT+TGG + chr5_4:43549370-43549389 Msa0852490:intron 30.0%
! TCTGATTCATCTTTTAATGC+AGG + chr5_4:43549681-43549700 Msa0852490:intron 30.0%
TATCAATCTTGACCAAGAAA+TGG - chr5_4:43549755-43549774 None:intergenic 30.0%
TTTCTCTCTCTCTAGATATA+TGG - chr5_4:43550277-43550296 None:intergenic 30.0%
ATATATCTAGAGAGAGAGAA+AGG + chr5_4:43550276-43550295 Msa0852490:intron 30.0%
TATTTCACGCATCAATTACT+TGG - chr5_4:43550312-43550331 None:intergenic 30.0%
CGTCAAAAAAATGCAATGTA+AGG - chr5_4:43550458-43550477 None:intergenic 30.0%
ATATGATGAACTACCAAGTA+CGG - chr5_4:43550701-43550720 None:intergenic 30.0%
! ACTGTATAGAAGAAAGTACA+GGG + chr5_4:43550748-43550767 Msa0852490:CDS 30.0%
GTATCTCAATCTATGCATTT+GGG + chr5_4:43550889-43550908 Msa0852490:CDS 30.0%
TCTTTCTCTGTATTTGTTTG+AGG - chr5_4:43550921-43550940 None:intergenic 30.0%
! ACGATTTCGCGATTTTTATT+TGG + chr5_4:43550956-43550975 Msa0852490:CDS 30.0%
!! CGATTTCGCGATTTTTATTT+GGG + chr5_4:43550957-43550976 Msa0852490:CDS 30.0%
TGAGTTACTGACACTAAAAT+TGG + chr5_4:43550984-43551003 Msa0852490:intron 30.0%
CCATAATCCTGCAATAAAAT+AGG - chr5_4:43551043-43551062 None:intergenic 30.0%
! CCTATTTTATTGCAGGATTA+TGG + chr5_4:43551040-43551059 Msa0852490:intron 30.0%
!!! ATGATTCTGTTGTTTTCAAC+TGG + chr5_4:43551349-43551368 Msa0852490:intron 30.0%
ATCACTAGTTGAATAATTGG+TGG + chr5_4:43551434-43551453 Msa0852490:intron 30.0%
TACTTCACAGTAAAACTATC+TGG + chr5_4:43551585-43551604 Msa0852490:intron 30.0%
! TAAAACTATCTGGTTTGACT+TGG + chr5_4:43551595-43551614 Msa0852490:intron 30.0%
TGATTGCAATGAATCATCAT+TGG + chr5_4:43551740-43551759 Msa0852490:intron 30.0%
ATTGGATGCTAATTGAGTTA+TGG + chr5_4:43551758-43551777 Msa0852490:intron 30.0%
!!! AGCCAAATAACATTTTGACT+AGG + chr5_4:43551805-43551824 Msa0852490:intron 30.0%
GACTAGGTTATTGCATATTA+TGG + chr5_4:43551821-43551840 Msa0852490:intron 30.0%
! ATTTTCCATCCTCAATTGTA+TGG + chr5_4:43551853-43551872 Msa0852490:intron 30.0%
AAATACTTGCATGGATACAT+TGG + chr5_4:43552046-43552065 Msa0852490:CDS 30.0%
TAAACACCTATGCTTTGATA+TGG + chr5_4:43552203-43552222 Msa0852490:intron 30.0%
CATATTTGATCCATTTCTGA+AGG - chr5_4:43552260-43552279 None:intergenic 30.0%
CAGAAATGGATCAAATATGA+AGG + chr5_4:43552261-43552280 Msa0852490:intron 30.0%
! ATATGAAGGGATATTTTGTG+TGG + chr5_4:43552275-43552294 Msa0852490:CDS 30.0%
ATCTTGTACCCTTCAAAAAT+TGG - chr5_4:43552420-43552439 None:intergenic 30.0%
TAACGATTCATCACTTGTTT+CGG + chr5_4:43552468-43552487 Msa0852490:CDS 30.0%
TGTGTATGCAATCATCATAA+AGG + chr5_4:43552676-43552695 Msa0852490:three_prime_UTR 30.0%
GTGTATGCAATCATCATAAA+GGG + chr5_4:43552677-43552696 Msa0852490:three_prime_UTR 30.0%
GTATTCATGACTAACTCTAA+TGG + chr5_4:43552785-43552804 Msa0852490:three_prime_UTR 30.0%
! TTTTGCCATAAAGAAAAGAC+AGG - chr5_4:43552826-43552845 None:intergenic 30.0%
!! GATGTGTTTGAAATTTTGCA+AGG + chr5_4:43552895-43552914 Msa0852490:three_prime_UTR 30.0%
!! ATTTTAGAAGATAGCTGCAA+AGG + chr5_4:43552954-43552973 Msa0852490:three_prime_UTR 30.0%
!! AGAATTTGTTAAGATGTCTC+AGG - chr5_4:43552983-43553002 None:intergenic 30.0%
AAATTCTTATGTGGTTGCAA+AGG + chr5_4:43552996-43553015 Msa0852490:three_prime_UTR 30.0%
ACAAGAGTCAAACATGTATG+TGG - chr5_4:43549051-43549070 None:intergenic 35.0%
TGACCCAAAAACAAAGTCAA+CGG - chr5_4:43549142-43549161 None:intergenic 35.0%
! TGCATGGTTACTTCTTTTTG+GGG - chr5_4:43549199-43549218 None:intergenic 35.0%
GTGTTGTGATTATGAATAGG+TGG + chr5_4:43549270-43549289 Msa0852490:intron 35.0%
TGTGATTATGAATAGGTGGA+AGG + chr5_4:43549274-43549293 Msa0852490:intron 35.0%
AGCGAAAATCAATGAGAAAC+TGG + chr5_4:43549445-43549464 Msa0852490:intron 35.0%
GCGAAAATCAATGAGAAACT+GGG + chr5_4:43549446-43549465 Msa0852490:intron 35.0%
AAAATGCTAGTCATGAGAAC+TGG - chr5_4:43549540-43549559 None:intergenic 35.0%
TACAAGGTAAACAAGACACA+AGG + chr5_4:43549621-43549640 Msa0852490:intron 35.0%
CCAAGAAATGGAAAACCTAT+AGG - chr5_4:43549743-43549762 None:intergenic 35.0%
! CCTATAGGTTTTCCATTTCT+TGG + chr5_4:43549740-43549759 Msa0852490:CDS 35.0%
! TGCTTTTATTCCTTCCTAGA+TGG + chr5_4:43549876-43549895 Msa0852490:intron 35.0%
TTGTAATACTGCAATCCCTT+CGG - chr5_4:43549918-43549937 None:intergenic 35.0%
TTGAGGATGAATATGAAGGA+TGG + chr5_4:43550148-43550167 Msa0852490:CDS 35.0%
!! CATCAATTACTTGGTGTCTA+TGG - chr5_4:43550303-43550322 None:intergenic 35.0%
ATTGATCATATGAGCAAGTG+AGG - chr5_4:43550362-43550381 None:intergenic 35.0%
TCACTTGCTCATATGATCAA+TGG + chr5_4:43550361-43550380 Msa0852490:intron 35.0%
!!! GCATTTTTTTGACGGAATTG+AGG + chr5_4:43550464-43550483 Msa0852490:intron 35.0%
!!! GATGTGTGTTTTAGAGAGTT+CGG + chr5_4:43550533-43550552 Msa0852490:CDS 35.0%
!!! ATGTGTGTTTTAGAGAGTTC+GGG + chr5_4:43550534-43550553 Msa0852490:CDS 35.0%
CTTTCTTCTATACAGTCTCA+CGG - chr5_4:43550744-43550763 None:intergenic 35.0%
! GACTGTATAGAAGAAAGTAC+AGG + chr5_4:43550747-43550766 Msa0852490:CDS 35.0%
GGTATCTCAATCTATGCATT+TGG + chr5_4:43550888-43550907 Msa0852490:CDS 35.0%
!! TTCGCGATTTTTATTTGGGT+TGG + chr5_4:43550961-43550980 Msa0852490:CDS 35.0%
! CTTACTGCCTATTTTATTGC+AGG + chr5_4:43551033-43551052 Msa0852490:intron 35.0%
!! ATAGGAACCCTTAACTTGTT+CGG - chr5_4:43551147-43551166 None:intergenic 35.0%
AAGGGTTCCTATGACTTTAT+TGG + chr5_4:43551155-43551174 Msa0852490:CDS 35.0%
AGCTTAGAGCTATATAAGCT+TGG + chr5_4:43551304-43551323 Msa0852490:intron 35.0%
TTGTTTACACCGATGAAAAG+GGG - chr5_4:43551406-43551425 None:intergenic 35.0%
GTTGTTTACACCGATGAAAA+GGG - chr5_4:43551407-43551426 None:intergenic 35.0%
! TGTTGTTTACACCGATGAAA+AGG - chr5_4:43551408-43551427 None:intergenic 35.0%
!! TTTGTTTTCTGTGGTTTTGC+AGG + chr5_4:43551475-43551494 Msa0852490:intron 35.0%
GGAAATATTTGTAGAGAACG+AGG + chr5_4:43551504-43551523 Msa0852490:CDS 35.0%
GAAACATTCAAGACCCTTTA+TGG + chr5_4:43551659-43551678 Msa0852490:CDS 35.0%
!! TATAGGTGGATTGCCATAAA+GGG - chr5_4:43551675-43551694 None:intergenic 35.0%
!! ATATAGGTGGATTGCCATAA+AGG - chr5_4:43551676-43551695 None:intergenic 35.0%
TCAATGTAATCTTGAACGAG+AGG - chr5_4:43551723-43551742 None:intergenic 35.0%
CAATTCCATACAATTGAGGA+TGG - chr5_4:43551861-43551880 None:intergenic 35.0%
CAAGGGATTTGACAATGATT+TGG + chr5_4:43551894-43551913 Msa0852490:intron 35.0%
GGCCTAACAATTCAAACAAT+TGG - chr5_4:43551979-43551998 None:intergenic 35.0%
TGTTTGAATTGTTAGGCCAA+CGG + chr5_4:43551981-43552000 Msa0852490:intron 35.0%
ATTTCACCCTTGATTCATCA+TGG - chr5_4:43552030-43552049 None:intergenic 35.0%
ATACCTTAAGGAATCAAGCA+CGG - chr5_4:43552074-43552093 None:intergenic 35.0%
AGTAGCAATCACATACCTTA+AGG - chr5_4:43552086-43552105 None:intergenic 35.0%
GACATACCATATCAAAGCAT+AGG - chr5_4:43552212-43552231 None:intergenic 35.0%
!! CATTGATGCATTTGAGTTGT+TGG + chr5_4:43552303-43552322 Msa0852490:CDS 35.0%
GTTGTTGGATGGATATGAAT+CGG + chr5_4:43552318-43552337 Msa0852490:CDS 35.0%
ATGGATATGAATCGGTCTAT+GGG + chr5_4:43552326-43552345 Msa0852490:CDS 35.0%
! AAATTGGCTGTACCATTTTG+CGG - chr5_4:43552404-43552423 None:intergenic 35.0%
! ATGGTACAGCCAATTTTTGA+AGG + chr5_4:43552408-43552427 Msa0852490:CDS 35.0%
! TGGTACAGCCAATTTTTGAA+GGG + chr5_4:43552409-43552428 Msa0852490:CDS 35.0%
GAGTTCAATTGCACTAACTA+GGG - chr5_4:43552446-43552465 None:intergenic 35.0%
TGAGTTCAATTGCACTAACT+AGG - chr5_4:43552447-43552466 None:intergenic 35.0%
TTGGAGATTTACTTCAGTAG+TGG + chr5_4:43552491-43552510 Msa0852490:CDS 35.0%
TGGAGATTTACTTCAGTAGT+GGG + chr5_4:43552492-43552511 Msa0852490:exon 35.0%
!! TGAGAGTCTTTCAGTTTTGT+CGG + chr5_4:43552568-43552587 Msa0852490:three_prime_UTR 35.0%
ATGATGATTGCATACACACA+TGG - chr5_4:43552674-43552693 None:intergenic 35.0%
GAGTGATCTCACATTAACAA+TGG + chr5_4:43552699-43552718 Msa0852490:three_prime_UTR 35.0%
!! TGGTATCTAGTTCTTCGATT+TGG + chr5_4:43552719-43552738 Msa0852490:three_prime_UTR 35.0%
!! GGTATCTAGTTCTTCGATTT+GGG + chr5_4:43552720-43552739 Msa0852490:three_prime_UTR 35.0%
GAAAGTGAGACTATAGTTCA+TGG + chr5_4:43553023-43553042 Msa0852490:three_prime_UTR 35.0%
TGCTTGTAAACTTGGCTGTT+GGG + chr5_4:43549079-43549098 Msa0852490:CDS 40.0%
!!! TTCCCCGTTGACTTTGTTTT+TGG + chr5_4:43549135-43549154 Msa0852490:CDS 40.0%
!!! TCCCCGTTGACTTTGTTTTT+GGG + chr5_4:43549136-43549155 Msa0852490:CDS 40.0%
ACCCAAAAACAAAGTCAACG+GGG - chr5_4:43549140-43549159 None:intergenic 40.0%
GACCCAAAAACAAAGTCAAC+GGG - chr5_4:43549141-43549160 None:intergenic 40.0%
!!! GTTGACTTTGTTTTTGGGTC+AGG + chr5_4:43549141-43549160 Msa0852490:CDS 40.0%
AAAGAGAACCTGATAAGCAG+AGG - chr5_4:43549169-43549188 None:intergenic 40.0%
GATTATGAATAGGTGGAAGG+AGG + chr5_4:43549277-43549296 Msa0852490:intron 40.0%
ATGGAAGAACTCCTAGCATT+TGG + chr5_4:43549311-43549330 Msa0852490:CDS 40.0%
TGGAAGAACTCCTAGCATTT+GGG + chr5_4:43549312-43549331 Msa0852490:CDS 40.0%
TATTCCTTCCTAGATGGTAG+AGG + chr5_4:43549882-43549901 Msa0852490:intron 40.0%
TGTAATACTGCAATCCCTTC+GGG - chr5_4:43549917-43549936 None:intergenic 40.0%
TACAAGTCTTTCGCATTTGC+AGG + chr5_4:43550078-43550097 Msa0852490:intron 40.0%
!!! TGTGTGTTTTAGAGAGTTCG+GGG + chr5_4:43550535-43550554 Msa0852490:CDS 40.0%
CTACCTACAGCGAAGATATT+GGG - chr5_4:43550593-43550612 None:intergenic 40.0%
ACTACCTACAGCGAAGATAT+TGG - chr5_4:43550594-43550613 None:intergenic 40.0%
GCTGTAGGTAGTTATGATCA+AGG + chr5_4:43550602-43550621 Msa0852490:CDS 40.0%
CTCTCTATAACGCAAAATGG+AGG - chr5_4:43550653-43550672 None:intergenic 40.0%
GTGCTCTCTATAACGCAAAA+TGG - chr5_4:43550656-43550675 None:intergenic 40.0%
TTCAAATGATGAGTTGCCCT+TGG - chr5_4:43550678-43550697 None:intergenic 40.0%
CTCATCATTTGAACCGTACT+TGG + chr5_4:43550685-43550704 Msa0852490:CDS 40.0%
!! CTAGAGACTTGTTACATTGC+AGG + chr5_4:43550845-43550864 Msa0852490:intron 40.0%
! GAGGAACAGAATGGATTTGT+TGG + chr5_4:43550867-43550886 Msa0852490:CDS 40.0%
ATTATGGAACCCTTGTTGCA+TGG + chr5_4:43551056-43551075 Msa0852490:CDS 40.0%
GCATTTGTCTTCATGGAATC+GGG - chr5_4:43551089-43551108 None:intergenic 40.0%
CGCATTTGTCTTCATGGAAT+CGG - chr5_4:43551090-43551109 None:intergenic 40.0%
CGATTCCATGAAGACAAATG+CGG + chr5_4:43551088-43551107 Msa0852490:CDS 40.0%
GATTCCATGAAGACAAATGC+GGG + chr5_4:43551089-43551108 Msa0852490:CDS 40.0%
CAAGAATTCCTTCCTTCACA+AGG + chr5_4:43551114-43551133 Msa0852490:CDS 40.0%
CGTGAATCCGAACAAGTTAA+GGG + chr5_4:43551137-43551156 Msa0852490:CDS 40.0%
TGCAATGAAATCTCGCAGTT+CGG - chr5_4:43551234-43551253 None:intergenic 40.0%
CAAAGCCACTTGGTATGTAT+GGG + chr5_4:43551264-43551283 Msa0852490:intron 40.0%
AACAACCCATACATACCAAG+TGG - chr5_4:43551272-43551291 None:intergenic 40.0%
! TGGTATGTATGGGTTGTTAG+TGG + chr5_4:43551274-43551293 Msa0852490:intron 40.0%
! TATCTGCTTCCCCTTTTCAT+CGG + chr5_4:43551394-43551413 Msa0852490:intron 40.0%
CTAATTGAGTTATGGCGCAA+AGG + chr5_4:43551766-43551785 Msa0852490:intron 40.0%
! GGGATTTGACAATGATTTGG+TGG + chr5_4:43551897-43551916 Msa0852490:intron 40.0%
ACTCCACCATGATGAATCAA+GGG + chr5_4:43552021-43552040 Msa0852490:CDS 40.0%
TCAAGGGTGAAATACTTGCA+TGG + chr5_4:43552037-43552056 Msa0852490:CDS 40.0%
!! GATGCATTTGAGTTGTTGGA+TGG + chr5_4:43552307-43552326 Msa0852490:CDS 40.0%
GATGGATATGAATCGGTCTA+TGG + chr5_4:43552325-43552344 Msa0852490:CDS 40.0%
! ATGGGCTATACTATGTCGAT+AGG + chr5_4:43552344-43552363 Msa0852490:CDS 40.0%
TTTGGGTATCTTCTCAACTC+TGG - chr5_4:43552376-43552395 None:intergenic 40.0%
! ACCATTTTGCGGATAGCTTT+GGG - chr5_4:43552393-43552412 None:intergenic 40.0%
! TACCATTTTGCGGATAGCTT+TGG - chr5_4:43552394-43552413 None:intergenic 40.0%
TTCAATTGCACTAACTAGGG+AGG - chr5_4:43552443-43552462 None:intergenic 40.0%
GATTCATCACTTGTTTCGGT+TGG + chr5_4:43552472-43552491 Msa0852490:CDS 40.0%
!! TTTCAGTTTTGTCGGTTAGC+TGG + chr5_4:43552576-43552595 Msa0852490:three_prime_UTR 40.0%
TGCATACACACATGGAATAG+TGG - chr5_4:43552666-43552685 None:intergenic 40.0%
! GAGGTTCTTTGAGAAATCTG+AGG + chr5_4:43552763-43552782 Msa0852490:three_prime_UTR 40.0%
! GCCAACCTGTCTTTTCTTTA+TGG + chr5_4:43552818-43552837 Msa0852490:three_prime_UTR 40.0%
GCCATAAAGAAAAGACAGGT+TGG - chr5_4:43552822-43552841 None:intergenic 40.0%
TTCCAGATGCAAGTCATCTT+TGG + chr5_4:43552865-43552884 Msa0852490:three_prime_UTR 40.0%
! AACCAAAGATGACTTGCATC+TGG - chr5_4:43552870-43552889 None:intergenic 40.0%
! GCAAGTCATCTTTGGTTTCT+AGG + chr5_4:43552873-43552892 Msa0852490:three_prime_UTR 40.0%
TCTTATGTGGTTGCAAAGGT+TGG + chr5_4:43553000-43553019 Msa0852490:three_prime_UTR 40.0%
CTTATGTGGTTGCAAAGGTT+GGG + chr5_4:43553001-43553020 Msa0852490:three_prime_UTR 40.0%
ATGAGCTAGAACCACCAAGT+CGG + chr5_4:43548916-43548935 Msa0852490:five_prime_UTR 45.0%
! AGTAGAAGACAACACCGACT+TGG - chr5_4:43548933-43548952 None:intergenic 45.0%
GTGCTTGTAAACTTGGCTGT+TGG + chr5_4:43549078-43549097 Msa0852490:CDS 45.0%
GCTTGTAAACTTGGCTGTTG+GGG + chr5_4:43549080-43549099 Msa0852490:CDS 45.0%
!! GAAGGAGGTGCTAATGAAGA+TGG + chr5_4:43549292-43549311 Msa0852490:CDS 45.0%
!! GCAAAGGTATCCCAAATGCT+AGG - chr5_4:43549325-43549344 None:intergenic 45.0%
TGACTAACCAGCATGTGCAA+AGG - chr5_4:43549341-43549360 None:intergenic 45.0%
ATACAAAAAGGGTTTGCGCG+TGG + chr5_4:43549561-43549580 Msa0852490:CDS 45.0%
GTGCAACTCATGGTTGAAAC+AGG + chr5_4:43549709-43549728 Msa0852490:CDS 45.0%
! TGGAAAACCTATAGGCATCG+AGG - chr5_4:43549735-43549754 None:intergenic 45.0%
TAGTGGTGTAGTGTGACATG+TGG - chr5_4:43550111-43550130 None:intergenic 45.0%
GCGCTTGAGGATGAATATGA+AGG + chr5_4:43550144-43550163 Msa0852490:CDS 45.0%
CAGCAAACTTGTGCAGCTAT+AGG - chr5_4:43550205-43550224 None:intergenic 45.0%
TCGGGGATAGAGTCAAGTAT+TGG + chr5_4:43550552-43550571 Msa0852490:CDS 45.0%
AATGGAGGAGAACATCGCTT+AGG - chr5_4:43550638-43550657 None:intergenic 45.0%
!! TTGCGTTATAGAGAGCACCA+AGG + chr5_4:43550658-43550677 Msa0852490:CDS 45.0%
!! TGCGTTATAGAGAGCACCAA+GGG + chr5_4:43550659-43550678 Msa0852490:CDS 45.0%
!! GAGACTTGTTACATTGCAGG+AGG + chr5_4:43550848-43550867 Msa0852490:intron 45.0%
ACATTGCAGGAGGAACAGAA+TGG + chr5_4:43550858-43550877 Msa0852490:intron 45.0%
GGATAGTCTCCATGCAACAA+GGG - chr5_4:43551068-43551087 None:intergenic 45.0%
GCGTGAATCCGAACAAGTTA+AGG + chr5_4:43551136-43551155 Msa0852490:CDS 45.0%
GCGAGATTTCATTGCAGACA+TGG + chr5_4:43551238-43551257 Msa0852490:CDS 45.0%
GCAAAGCCACTTGGTATGTA+TGG + chr5_4:43551263-43551282 Msa0852490:intron 45.0%
TCAGTACCCATTCACACCAT+GGG + chr5_4:43551619-43551638 Msa0852490:intron 45.0%
CTAAAGCCCATGGTGTGAAT+GGG - chr5_4:43551628-43551647 None:intergenic 45.0%
!! ATGTGTTGCTTAGTGTCCGT+TGG - chr5_4:43552000-43552019 None:intergenic 45.0%
CACTCCACCATGATGAATCA+AGG + chr5_4:43552020-43552039 Msa0852490:CDS 45.0%
TCACCCTTGATTCATCATGG+TGG - chr5_4:43552027-43552046 None:intergenic 45.0%
ACCCAAAGCTATCCGCAAAA+TGG + chr5_4:43552389-43552408 Msa0852490:CDS 45.0%
! TTTGTCGGTTAGCTGGTTAG+TGG + chr5_4:43552583-43552602 Msa0852490:three_prime_UTR 45.0%
CATGTGCATACGAGAATGTG+AGG + chr5_4:43552744-43552763 Msa0852490:three_prime_UTR 45.0%
TCGCAGAGTTCACACATAGA+TGG - chr5_4:43552934-43552953 None:intergenic 45.0%
!! AGAAGACAACACCGACTTGG+TGG - chr5_4:43548930-43548949 None:intergenic 50.0%
TGGGATACCTTTGCACATGC+TGG + chr5_4:43549331-43549350 Msa0852490:CDS 50.0%
CGACACGTAGCACAAGTACA+AGG + chr5_4:43549605-43549624 Msa0852490:intron 50.0%
GCAGGAAGATGTGCAACTCA+TGG + chr5_4:43549699-43549718 Msa0852490:intron 50.0%
AAACAGGCCTCGATGCCTAT+AGG + chr5_4:43549725-43549744 Msa0852490:CDS 50.0%
GGTGTAGTGTGACATGTGGT+TGG - chr5_4:43550107-43550126 None:intergenic 50.0%
ACACCACTATGATCTCCCAC+AGG + chr5_4:43550122-43550141 Msa0852490:CDS 50.0%
ATTCATCCTCAAGCGCCTGT+GGG - chr5_4:43550140-43550159 None:intergenic 50.0%
TATTCATCCTCAAGCGCCTG+TGG - chr5_4:43550141-43550160 None:intergenic 50.0%
TGAAGGATGGCTTAGTCGTG+AGG + chr5_4:43550161-43550180 Msa0852490:CDS 50.0%
GAGCCCAATATCTTCGCTGT+AGG + chr5_4:43550587-43550606 Msa0852490:CDS 50.0%
AGGAGAACATCGCTTAGGTG+GGG - chr5_4:43550633-43550652 None:intergenic 50.0%
GAGGAGAACATCGCTTAGGT+GGG - chr5_4:43550634-43550653 None:intergenic 50.0%
GGGATAGTCTCCATGCAACA+AGG - chr5_4:43551069-43551088 None:intergenic 50.0%
GATTCACGCCTTGTGAAGGA+AGG - chr5_4:43551125-43551144 None:intergenic 50.0%
TTCGGATTCACGCCTTGTGA+AGG - chr5_4:43551129-43551148 None:intergenic 50.0%
!! CTGTGGTTTTGCAGGTACAG+AGG + chr5_4:43551483-43551502 Msa0852490:intron 50.0%
CTCAGTACCCATTCACACCA+TGG + chr5_4:43551618-43551637 Msa0852490:intron 50.0%
CCTAAAGCCCATGGTGTGAA+TGG - chr5_4:43551629-43551648 None:intergenic 50.0%
CCATTCACACCATGGGCTTT+AGG + chr5_4:43551626-43551645 Msa0852490:CDS 50.0%
AGCACTTCTCCTAAAGCCCA+TGG - chr5_4:43551638-43551657 None:intergenic 50.0%
!! ATGGGCTTTAGGAGAAGTGC+TGG + chr5_4:43551637-43551656 Msa0852490:CDS 50.0%
GCACCGTGCTTGATTCCTTA+AGG + chr5_4:43552068-43552087 Msa0852490:CDS 50.0%
GTCAGGCACCTCTGCTTATC+AGG + chr5_4:43549158-43549177 Msa0852490:CDS 55.0%
CAAAAAGGGTTTGCGCGTGG+AGG + chr5_4:43549564-43549583 Msa0852490:CDS 55.0%
GTACTTGTGCTACGTGTCGC+AGG - chr5_4:43549604-43549623 None:intergenic 55.0%
GGGTCCTCTACCATCTAGGA+AGG - chr5_4:43549889-43549908 None:intergenic 55.0%
! TGACGGGTCCTCTACCATCT+AGG - chr5_4:43549893-43549912 None:intergenic 55.0%
!! TGCAATCCCTTCGGGTTGAC+GGG - chr5_4:43549909-43549928 None:intergenic 55.0%
!! CTGCAATCCCTTCGGGTTGA+CGG - chr5_4:43549910-43549929 None:intergenic 55.0%
GGAGGAGAACATCGCTTAGG+TGG - chr5_4:43550635-43550654 None:intergenic 55.0%
TGCGCCCGCATTTGTCTTCA+TGG - chr5_4:43551096-43551115 None:intergenic 55.0%
GACATGGCTGCAAAGCCACT+TGG + chr5_4:43551254-43551273 Msa0852490:CDS 55.0%
GGGTTTGCGCGTGGAGGAAA+TGG + chr5_4:43549570-43549589 Msa0852490:CDS 60.0%
TAGAGGACCCGTCAACCCGA+AGG + chr5_4:43549899-43549918 Msa0852490:CDS 60.0%
AGAGGACCCGTCAACCCGAA+GGG + chr5_4:43549900-43549919 Msa0852490:CDS 60.0%
GCGCCTGTGGGAGATCATAG+TGG - chr5_4:43550128-43550147 None:intergenic 60.0%
TGATCTCCCACAGGCGCTTG+AGG + chr5_4:43550131-43550150 Msa0852490:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 43548898 43553074 43548898 ID=Msa0852490;Name=Msa0852490
chr5_4 mRNA 43548898 43553074 43548898 ID=Msa0852490-mRNA-1;Parent=Msa0852490;Name=Msa0852490-mRNA-1;_AED=0.17;_eAED=0.17;_QI=120|0.76|0.78|1|0.92|0.92|14|564|515
chr5_4 exon 43548898 43549017 43548898 ID=Msa0852490-mRNA-1:exon:13772;Parent=Msa0852490-mRNA-1
chr5_4 exon 43549042 43549179 43549042 ID=Msa0852490-mRNA-1:exon:13773;Parent=Msa0852490-mRNA-1
chr5_4 exon 43549289 43549352 43549289 ID=Msa0852490-mRNA-1:exon:13774;Parent=Msa0852490-mRNA-1
chr5_4 exon 43549541 43549596 43549541 ID=Msa0852490-mRNA-1:exon:13775;Parent=Msa0852490-mRNA-1
chr5_4 exon 43549703 43549778 43549703 ID=Msa0852490-mRNA-1:exon:13776;Parent=Msa0852490-mRNA-1
chr5_4 exon 43549895 43549966 43549895 ID=Msa0852490-mRNA-1:exon:13777;Parent=Msa0852490-mRNA-1
chr5_4 exon 43550100 43550187 43550100 ID=Msa0852490-mRNA-1:exon:13778;Parent=Msa0852490-mRNA-1
chr5_4 exon 43550511 43550769 43550511 ID=Msa0852490-mRNA-1:exon:13779;Parent=Msa0852490-mRNA-1
chr5_4 exon 43550867 43550982 43550867 ID=Msa0852490-mRNA-1:exon:13780;Parent=Msa0852490-mRNA-1
chr5_4 exon 43551055 43551275 43551055 ID=Msa0852490-mRNA-1:exon:13781;Parent=Msa0852490-mRNA-1
chr5_4 exon 43551497 43551525 43551497 ID=Msa0852490-mRNA-1:exon:13782;Parent=Msa0852490-mRNA-1
chr5_4 exon 43551623 43551710 43551623 ID=Msa0852490-mRNA-1:exon:13783;Parent=Msa0852490-mRNA-1
chr5_4 exon 43551996 43552089 43551996 ID=Msa0852490-mRNA-1:exon:13784;Parent=Msa0852490-mRNA-1
chr5_4 exon 43552264 43553074 43552264 ID=Msa0852490-mRNA-1:exon:13785;Parent=Msa0852490-mRNA-1
chr5_4 five_prime_UTR 43548898 43549017 43548898 ID=Msa0852490-mRNA-1:five_prime_utr;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43549042 43549179 43549042 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43549289 43549352 43549289 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43549541 43549596 43549541 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43549703 43549778 43549703 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43549895 43549966 43549895 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43550100 43550187 43550100 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43550511 43550769 43550511 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43550867 43550982 43550867 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43551055 43551275 43551055 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43551497 43551525 43551497 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43551623 43551710 43551623 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43551996 43552089 43551996 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 CDS 43552264 43552510 43552264 ID=Msa0852490-mRNA-1:cds;Parent=Msa0852490-mRNA-1
chr5_4 three_prime_UTR 43552511 43553074 43552511 ID=Msa0852490-mRNA-1:three_prime_utr;Parent=Msa0852490-mRNA-1
Gene Sequence

>Msa0852490

ATGGAACCACATACATGTTTGACTCTTGTTTTCTTTGTGCTTGTAAACTTGGCTGTTGGGGTGTTAAGTACTGATAATTATAGCAGACATGATTTCCCCGTTGACTTTGTTTTTGGGTCAGGCACCTCTGCTTATCAGGTGGAAGGAGGTGCTAATGAAGATGGAAGAACTCCTAGCATTTGGGATACCTTTGCACATGCTGTTCTCATGACTAGCATTTTTATACAAAAAGGGTTTGCGCGTGGAGGAAATGGAGATGAAGATGTGCAACTCATGGTTGAAACAGGCCTCGATGCCTATAGGTTTTCCATTTCTTGGTCAAGATTGATACCAAATGGTAGAGGACCCGTCAACCCGAAGGGATTGCAGTATTACAACAATCTCATCAATGAACTCATTAGAAATGGAATCCAACCACATGTCACACTACACCACTATGATCTCCCACAGGCGCTTGAGGATGAATATGAAGGATGGCTTAGTCGTGAGGTCATAAAAGACTTCACAAACTATGCAGATGTGTGTTTTAGAGAGTTCGGGGATAGAGTCAAGTATTGGACTACTGTGAACGAGCCCAATATCTTCGCTGTAGGTAGTTATGATCAAGGAATCACCCCACCTAAGCGATGTTCTCCTCCATTTTGCGTTATAGAGAGCACCAAGGGCAACTCATCATTTGAACCGTACTTGGTAGTTCATCATATTTTGTTAGCGCATTCTTCAGCCGTGAGACTGTATAGAAGAAAGTACAGGGAGGAACAGAATGGATTTGTTGGTATCTCAATCTATGCATTTGGGTCAGTTCCTCAAACAAATACAGAGAAAGATAGGGCAGCATGTCAACGATTTCGCGATTTTTATTTGGGTTGGATTATGGAACCCTTGTTGCATGGAGACTATCCCGATTCCATGAAGACAAATGCGGGCGCAAGAATTCCTTCCTTCACAAGGCGTGAATCCGAACAAGTTAAGGGTTCCTATGACTTTATTGGCATAATTCACTACATCAAGTTTAATGTCACAGACAATTCTGATGTGTTGAAGACCGAACTGCGAGATTTCATTGCAGACATGGCTGCAAAGCCACTTGGTACAGAGGAAATATTTGTAGAGAACGAGTACCCATTCACACCATGGGCTTTAGGAGAAGTGCTGGAAACATTCAAGACCCTTTATGGCAATCCACCTATATTCATTCATGAAAATGGCCAACGGACACTAAGCAACACATCACTCCACCATGATGAATCAAGGGTGAAATACTTGCATGGATACATTGGCACCGTGCTTGATTCCTTAAGAAATGGATCAAATATGAAGGGATATTTTGTGTGGTCTTTCATTGATGCATTTGAGTTGTTGGATGGATATGAATCGGTCTATGGGCTATACTATGTCGATAGGAATGATCCAGAGTTGAGAAGATACCCAAAGCTATCCGCAAAATGGTACAGCCAATTTTTGAAGGGTACAAGATCCTCCCTAGTTAGTGCAATTGAACTCAATAACGATTCATCACTTGTTTCGGTTGGAGATTTACTTCAGTAG
Protein sequence

>Msa0852490

MEPHTCLTLVFFVLVNLAVGVLSTDNYSRHDFPVDFVFGSGTSAYQVEGGANEDGRTPSIWDTFAHAVLMTSIFIQKGFARGGNGDEDVQLMVETGLDAYRFSISWSRLIPNGRGPVNPKGLQYYNNLINELIRNGIQPHVTLHHYDLPQALEDEYEGWLSREVIKDFTNYADVCFREFGDRVKYWTTVNEPNIFAVGSYDQGITPPKRCSPPFCVIESTKGNSSFEPYLVVHHILLAHSSAVRLYRRKYREEQNGFVGISIYAFGSVPQTNTEKDRAACQRFRDFYLGWIMEPLLHGDYPDSMKTNAGARIPSFTRRESEQVKGSYDFIGIIHYIKFNVTDNSDVLKTELRDFIADMAAKPLGTEEIFVENEYPFTPWALGEVLETFKTLYGNPPIFIHENGQRTLSNTSLHHDESRVKYLHGYIGTVLDSLRNGSNMKGYFVWSFIDAFELLDGYESVYGLYYVDRNDPELRRYPKLSAKWYSQFLKGTRSSLVSAIELNNDSSLVSVGDLLQ*