Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179270 | XP_003627173.1 | 96.049 | 658 | 16 | 1 | 1 | 648 | 1 | 658 | 0.0 | 1298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179270 | sp|P09186|LOX3_SOYBN | 75.077 | 646 | 151 | 1 | 9 | 644 | 11 | 656 | 0.0 | 1019 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013270 | Msa1179270 | 0.823154 | 1.613493e-53 | -8.615850e-47 |
| Msa0024650 | Msa1179270 | 0.829254 | 5.706745e-55 | -8.615850e-47 |
| Msa0047970 | Msa1179270 | 0.811137 | 8.135168e-51 | -8.615850e-47 |
| Msa0059320 | Msa1179270 | 0.800527 | 1.381948e-48 | -8.615850e-47 |
| Msa0062190 | Msa1179270 | 0.821222 | 4.528986e-53 | -8.615850e-47 |
| Msa0063540 | Msa1179270 | 0.829597 | 4.708056e-55 | -8.615850e-47 |
| Msa0072180 | Msa1179270 | 0.803867 | 2.839367e-49 | -8.615850e-47 |
| Msa0106540 | Msa1179270 | 0.831935 | 1.258990e-55 | -8.615850e-47 |
| Msa0111780 | Msa1179270 | 0.812513 | 4.081848e-51 | -8.615850e-47 |
| Msa0120450 | Msa1179270 | 0.825863 | 3.717708e-54 | -8.615850e-47 |
| Msa0606600 | Msa1179270 | 0.831722 | 1.421244e-55 | -8.615850e-47 |
| Msa0614960 | Msa1179270 | 0.806659 | 7.388798e-50 | -8.615850e-47 |
| Msa0616010 | Msa1179270 | 0.803657 | 3.140496e-49 | -8.615850e-47 |
| Msa0629160 | Msa1179270 | 0.827349 | 1.643530e-54 | -8.615850e-47 |
| Msa0647300 | Msa1179270 | 0.826401 | 2.767710e-54 | -8.615850e-47 |
| Msa0670360 | Msa1179270 | 0.808146 | 3.574581e-50 | -8.615850e-47 |
| Msa0686040 | Msa1179270 | 0.800889 | 1.166318e-48 | -8.615850e-47 |
| Msa0686830 | Msa1179270 | 0.828447 | 8.946076e-55 | -8.615850e-47 |
| Msa0699170 | Msa1179270 | 0.822556 | 2.223642e-53 | -8.615850e-47 |
| Msa0707330 | Msa1179270 | 0.802911 | 4.480270e-49 | -8.615850e-47 |
| Msa0708680 | Msa1179270 | 0.813785 | 2.147023e-51 | -8.615850e-47 |
| Msa0720870 | Msa1179270 | 0.813226 | 2.849098e-51 | -8.615850e-47 |
| Msa0733560 | Msa1179270 | 0.812229 | 4.708968e-51 | -8.615850e-47 |
| Msa0757120 | Msa1179270 | 0.820251 | 7.569277e-53 | -8.615850e-47 |
| Msa0758990 | Msa1179270 | 0.802059 | 6.713691e-49 | -8.615850e-47 |
| Msa0773960 | Msa1179270 | 0.817011 | 4.113977e-52 | -8.615850e-47 |
| Msa0812720 | Msa1179270 | 0.807480 | 4.950882e-50 | -8.615850e-47 |
| Msa0838210 | Msa1179270 | 0.831600 | 1.523136e-55 | -8.615850e-47 |
| Msa0841520 | Msa1179270 | 0.801626 | 8.241320e-49 | -8.615850e-47 |
| Msa0841930 | Msa1179270 | 0.816272 | 6.024010e-52 | -8.615850e-47 |
| Msa0132080 | Msa1179270 | -0.814286 | 1.664402e-51 | -8.615850e-47 |
| Msa0163690 | Msa1179270 | 0.803388 | 3.570566e-49 | -8.615850e-47 |
| Msa0224870 | Msa1179270 | 0.801231 | 9.925281e-49 | -8.615850e-47 |
| Msa0364550 | Msa1179270 | 0.804807 | 1.809638e-49 | -8.615850e-47 |
| Msa0403740 | Msa1179270 | -0.802920 | 4.462632e-49 | -8.615850e-47 |
| Msa0409500 | Msa1179270 | 0.813165 | 2.938700e-51 | -8.615850e-47 |
| Msa0410560 | Msa1179270 | 0.808903 | 2.464168e-50 | -8.615850e-47 |
| Msa0414480 | Msa1179270 | 0.806147 | 9.472914e-50 | -8.615850e-47 |
| Msa0444210 | Msa1179270 | 0.807748 | 4.343391e-50 | -8.615850e-47 |
| Msa0448190 | Msa1179270 | 0.826513 | 2.602864e-54 | -8.615850e-47 |
| Msa0456450 | Msa1179270 | -0.800670 | 1.292339e-48 | -8.615850e-47 |
| Msa0457070 | Msa1179270 | -0.805523 | 1.281466e-49 | -8.615850e-47 |
| Msa0464620 | Msa1179270 | 0.806764 | 7.019133e-50 | -8.615850e-47 |
| Msa0998660 | Msa1179270 | -0.811673 | 6.222854e-51 | -8.615850e-47 |
| Msa1006030 | Msa1179270 | 0.802733 | 4.877571e-49 | -8.615850e-47 |
| Msa1006220 | Msa1179270 | 0.806838 | 6.771648e-50 | -8.615850e-47 |
| Msa1035050 | Msa1179270 | 0.807321 | 5.352970e-50 | -8.615850e-47 |
| Msa1055450 | Msa1179270 | 0.810177 | 1.311901e-50 | -8.615850e-47 |
| Msa1056890 | Msa1179270 | 0.805871 | 1.082878e-49 | -8.615850e-47 |
| Msa1062060 | Msa1179270 | 0.801672 | 8.063078e-49 | -8.615850e-47 |
| Msa1068780 | Msa1179270 | 0.805727 | 1.160769e-49 | -8.615850e-47 |
| Msa1075030 | Msa1179270 | 0.800143 | 1.655131e-48 | -8.615850e-47 |
| Msa1075090 | Msa1179270 | 0.812019 | 5.233865e-51 | -8.615850e-47 |
| Msa1100330 | Msa1179270 | 0.815078 | 1.111574e-51 | -8.615850e-47 |
| Msa1106680 | Msa1179270 | 0.801245 | 9.860313e-49 | -8.615850e-47 |
| Msa0261400 | Msa1179270 | 0.804849 | 1.772680e-49 | -8.615850e-47 |
| Msa0277520 | Msa1179270 | 0.806945 | 6.426968e-50 | -8.615850e-47 |
| Msa0279810 | Msa1179270 | 0.810357 | 1.199876e-50 | -8.615850e-47 |
| Msa0298690 | Msa1179270 | 0.810848 | 9.400897e-51 | -8.615850e-47 |
| Msa0319220 | Msa1179270 | 0.813946 | 1.978978e-51 | -8.615850e-47 |
| Msa0348370 | Msa1179270 | 0.806474 | 8.084739e-50 | -8.615850e-47 |
| Msa0354600 | Msa1179270 | 0.825088 | 5.671215e-54 | -8.615850e-47 |
| Msa0364030 | Msa1179270 | -0.802246 | 6.145244e-49 | -8.615850e-47 |
| Msa1108560 | Msa1179270 | 0.832522 | 9.012775e-56 | -8.615850e-47 |
| Msa1108610 | Msa1179270 | 0.809849 | 1.543630e-50 | -8.615850e-47 |
| Msa1115900 | Msa1179270 | 0.806747 | 7.080468e-50 | -8.615850e-47 |
| Msa1115980 | Msa1179270 | 0.811084 | 8.353269e-51 | -8.615850e-47 |
| Msa1119670 | Msa1179270 | 0.800227 | 1.591104e-48 | -8.615850e-47 |
| Msa1156740 | Msa1179270 | 0.808790 | 2.604936e-50 | -8.615850e-47 |
| Msa1157210 | Msa1179270 | 0.814610 | 1.411538e-51 | -8.615850e-47 |
| Msa1165460 | Msa1179270 | 0.801385 | 9.232083e-49 | -8.615850e-47 |
| Msa1179270 | Msa1181090 | 0.803247 | 3.817785e-49 | -8.615850e-47 |
| Msa1179270 | Msa1186340 | 0.827305 | 1.683267e-54 | -8.615850e-47 |
| Msa1179270 | Msa1186430 | 0.806396 | 8.394819e-50 | -8.615850e-47 |
| Msa1179270 | Msa1191350 | 0.805929 | 1.052621e-49 | -8.615850e-47 |
| Msa1179270 | Msa1191530 | -0.813614 | 2.341735e-51 | -8.615850e-47 |
| Msa1179270 | Msa1191640 | 0.823471 | 1.360766e-53 | -8.615850e-47 |
| Msa1179270 | Msa1203650 | 0.820153 | 7.973012e-53 | -8.615850e-47 |
| Msa1179270 | Msa1204870 | -0.802550 | 5.319218e-49 | -8.615850e-47 |
| Msa1179270 | Msa1204900 | -0.800576 | 1.350596e-48 | -8.615850e-47 |
| Msa1179270 | Msa1223960 | 0.813851 | 2.076182e-51 | -8.615850e-47 |
| Msa1179270 | Msa1223990 | 0.813062 | 3.095480e-51 | -8.615850e-47 |
| Msa1179270 | Msa1238250 | 0.806491 | 8.014945e-50 | -8.615850e-47 |
| Msa1179270 | Msa1240710 | 0.803983 | 2.686788e-49 | -8.615850e-47 |
| Msa1179270 | Msa1255740 | 0.828719 | 7.688595e-55 | -8.615850e-47 |
| Msa1179270 | Msa1263110 | 0.822637 | 2.129028e-53 | -8.615850e-47 |
| Msa1179270 | Msa1267990 | 0.827493 | 1.517661e-54 | -8.615850e-47 |
| Msa1179270 | Msa1273320 | 0.802038 | 6.780648e-49 | -8.615850e-47 |
| Msa1179270 | Msa1313960 | 0.829889 | 3.997547e-55 | -8.615850e-47 |
| Msa1179270 | Msa1319030 | 0.810853 | 9.377586e-51 | -8.615850e-47 |
| Msa1179270 | Msa1319190 | 0.814344 | 1.615751e-51 | -8.615850e-47 |
| Msa1179270 | Msa1321970 | 0.829949 | 3.866441e-55 | -8.615850e-47 |
| Msa1179270 | Msa1338510 | 0.805691 | 1.181138e-49 | -8.615850e-47 |
| Msa1179270 | Msa1342360 | -0.800344 | 1.506244e-48 | -8.615850e-47 |
| Msa1179270 | Msa1361980 | 0.811577 | 6.529756e-51 | -8.615850e-47 |
| Msa1179270 | Msa1368930 | 0.816238 | 6.130472e-52 | -8.615850e-47 |
| Msa1179270 | Msa1384130 | 0.804737 | 1.871509e-49 | -8.615850e-47 |
| Msa1179270 | Msa1405830 | 0.831113 | 2.006165e-55 | -8.615850e-47 |
| Msa1179270 | Msa1407810 | 0.802236 | 6.175305e-49 | -8.615850e-47 |
| Msa1179270 | Msa1431030 | 0.817328 | 3.490759e-52 | -8.615850e-47 |
| Msa1179270 | Msa1437780 | 0.801975 | 6.985203e-49 | -8.615850e-47 |
| Msa1179270 | Msa1441450 | 0.810109 | 1.357037e-50 | -8.615850e-47 |
| Msa1179270 | Msa1458270 | 0.817832 | 2.687760e-52 | -8.615850e-47 |
| Msa0487110 | Msa1179270 | 0.807736 | 4.369135e-50 | -8.615850e-47 |
| Msa0490060 | Msa1179270 | 0.807663 | 4.528165e-50 | -8.615850e-47 |
| Msa0491780 | Msa1179270 | 0.830186 | 3.383397e-55 | -8.615850e-47 |
| Msa0502970 | Msa1179270 | 0.812065 | 5.114093e-51 | -8.615850e-47 |
| Msa0523720 | Msa1179270 | 0.802028 | 6.814318e-49 | -8.615850e-47 |
| Msa0549170 | Msa1179270 | 0.818629 | 1.774119e-52 | -8.615850e-47 |
| Msa0565700 | Msa1179270 | 0.811060 | 8.455267e-51 | -8.615850e-47 |
| Msa0567570 | Msa1179270 | 0.808456 | 3.069744e-50 | -8.615850e-47 |
| Msa0587730 | Msa1179270 | 0.818838 | 1.590896e-52 | -8.615850e-47 |
| Msa0852490 | Msa1179270 | 0.803853 | 2.858801e-49 | -8.615850e-47 |
| Msa0852890 | Msa1179270 | 0.808102 | 3.653036e-50 | -8.615850e-47 |
| Msa0898830 | Msa1179270 | -0.815847 | 7.495320e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179270 | MtrunA17_Chr8g0342881 | 96.049 | 658 | 16 | 1 | 1 | 648 | 1 | 658 | 0.0 | 1298 |
| Msa1179270 | MtrunA17_Chr2g0329911 | 73.725 | 647 | 159 | 2 | 9 | 644 | 14 | 660 | 0.0 | 1003 |
| Msa1179270 | MtrunA17_Chr8g0342971 | 68.580 | 662 | 187 | 5 | 7 | 648 | 12 | 672 | 0.0 | 941 |
| Msa1179270 | MtrunA17_Chr8g0344211 | 68.252 | 652 | 190 | 3 | 9 | 643 | 14 | 665 | 0.0 | 932 |
| Msa1179270 | MtrunA17_Chr2g0329901 | 68.154 | 650 | 190 | 3 | 9 | 643 | 14 | 661 | 0.0 | 926 |
| Msa1179270 | MtrunA17_Chr8g0342951 | 68.950 | 657 | 187 | 3 | 9 | 648 | 14 | 670 | 0.0 | 925 |
| Msa1179270 | MtrunA17_Chr8g0343021 | 67.121 | 660 | 195 | 5 | 9 | 648 | 10 | 667 | 0.0 | 915 |
| Msa1179270 | MtrunA17_Chr5g0406871 | 66.220 | 672 | 201 | 7 | 1 | 648 | 1 | 670 | 0.0 | 914 |
| Msa1179270 | MtrunA17_Chr8g0343031 | 67.629 | 658 | 187 | 6 | 9 | 644 | 11 | 664 | 0.0 | 910 |
| Msa1179270 | MtrunA17_Chr8g0343011 | 65.152 | 660 | 206 | 3 | 8 | 648 | 13 | 667 | 0.0 | 904 |
| Msa1179270 | MtrunA17_Chr8g0342891 | 64.670 | 651 | 215 | 3 | 7 | 643 | 9 | 658 | 0.0 | 899 |
| Msa1179270 | MtrunA17_Chr8g0342921 | 64.750 | 661 | 213 | 5 | 2 | 643 | 7 | 666 | 0.0 | 892 |
| Msa1179270 | MtrunA17_Chr3g0120071 | 63.053 | 655 | 224 | 5 | 9 | 648 | 10 | 661 | 0.0 | 853 |
| Msa1179270 | MtrunA17_Chr8g0342931 | 71.115 | 547 | 148 | 1 | 107 | 643 | 1 | 547 | 0.0 | 830 |
| Msa1179270 | MtrunA17_Chr1g0191921 | 59.668 | 662 | 227 | 8 | 9 | 648 | 18 | 661 | 0.0 | 791 |
| Msa1179270 | MtrunA17_Chr8g0342901 | 59.146 | 656 | 214 | 9 | 10 | 648 | 12 | 630 | 0.0 | 783 |
| Msa1179270 | MtrunA17_Chr7g0272791 | 57.658 | 666 | 243 | 9 | 7 | 648 | 20 | 670 | 0.0 | 771 |
| Msa1179270 | MtrunA17_Chr1g0205611 | 56.732 | 661 | 245 | 9 | 8 | 644 | 7 | 650 | 0.0 | 752 |
| Msa1179270 | MtrunA17_Chr8g0342991 | 54.984 | 642 | 239 | 10 | 9 | 644 | 9 | 606 | 0.0 | 697 |
| Msa1179270 | MtrunA17_Chr8g0342981 | 56.452 | 620 | 216 | 9 | 50 | 644 | 32 | 622 | 0.0 | 687 |
| Msa1179270 | MtrunA17_Chr8g0343001 | 54.219 | 640 | 244 | 9 | 9 | 643 | 9 | 604 | 0.0 | 685 |
| Msa1179270 | MtrunA17_Chr8g0344201 | 46.105 | 629 | 312 | 12 | 32 | 640 | 100 | 721 | 4.36e-178 | 530 |
| Msa1179270 | MtrunA17_Chr8g0338451 | 43.750 | 640 | 306 | 15 | 41 | 644 | 43 | 664 | 9.39e-174 | 517 |
| Msa1179270 | MtrunA17_Chr3g0118651 | 44.356 | 629 | 303 | 16 | 39 | 640 | 88 | 696 | 1.13e-163 | 492 |
| Msa1179270 | MtrunA17_Chr3g0118641 | 43.396 | 636 | 307 | 18 | 39 | 644 | 87 | 699 | 2.17e-155 | 471 |
| Msa1179270 | MtrunA17_Chr8g0377101 | 42.488 | 619 | 310 | 16 | 52 | 641 | 109 | 710 | 3.31e-154 | 468 |
| Msa1179270 | MtrunA17_Chr3g0118621 | 42.540 | 630 | 323 | 16 | 33 | 642 | 50 | 660 | 4.13e-151 | 459 |
| Msa1179270 | MtrunA17_Chr4g0047281 | 40.836 | 622 | 319 | 13 | 38 | 640 | 98 | 689 | 1.40e-148 | 453 |
| Msa1179270 | MtrunA17_Chr4g0033171 | 48.024 | 506 | 241 | 10 | 156 | 645 | 23 | 522 | 6.54e-148 | 446 |
| Msa1179270 | MtrunA17_Chr8g0344241 | 72.500 | 200 | 54 | 1 | 444 | 643 | 60 | 258 | 4.16e-101 | 316 |
| Msa1179270 | MtrunA17_Chr8g0344241 | 45.833 | 72 | 33 | 1 | 282 | 353 | 9 | 74 | 9.17e-12 | 67.8 |
| Msa1179270 | MtrunA17_Chr6g0471951 | 43.195 | 338 | 157 | 5 | 310 | 644 | 11 | 316 | 1.28e-91 | 292 |
| Msa1179270 | MtrunA17_Chr7g0218231 | 57.258 | 124 | 52 | 1 | 493 | 615 | 9 | 132 | 3.93e-42 | 149 |
| Msa1179270 | MtrunA17_Chr6g0468081 | 55.056 | 89 | 39 | 1 | 528 | 615 | 1 | 89 | 2.52e-25 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1179270 | AT1G55020.1 | 58.359 | 658 | 233 | 9 | 9 | 644 | 20 | 658 | 0.0 | 769 |
| Msa1179270 | AT3G22400.1 | 54.532 | 662 | 260 | 9 | 9 | 644 | 34 | 680 | 0.0 | 728 |
| Msa1179270 | AT1G17420.1 | 44.643 | 616 | 311 | 13 | 45 | 640 | 108 | 713 | 2.69e-171 | 513 |
| Msa1179270 | AT1G72520.1 | 44.246 | 617 | 317 | 11 | 45 | 642 | 114 | 722 | 1.08e-170 | 511 |
| Msa1179270 | AT3G45140.1 | 43.914 | 649 | 303 | 19 | 45 | 658 | 95 | 717 | 4.60e-164 | 493 |
| Msa1179270 | AT3G45140.2 | 46.180 | 589 | 266 | 17 | 105 | 658 | 3 | 575 | 1.38e-160 | 480 |
| Msa1179270 | AT1G67560.1 | 41.615 | 644 | 326 | 17 | 32 | 645 | 91 | 714 | 7.53e-150 | 457 |
Find 157 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTCAGACTTTCTTGTTTA+TGG | 0.018570 | 8_1:-12593931 | Msa1179270:CDS |
| CGATACCCTTACTTCCTTTC+TGG | 0.021372 | 8_1:-12596130 | Msa1179270:CDS |
| CTTCATGCAGCTGTTAATTT+TGG | 0.086777 | 8_1:-12591766 | Msa1179270:three_prime_UTR |
| GATATCTTCAAAAGTTTATA+AGG | 0.229855 | 8_1:-12592335 | Msa1179270:CDS |
| AAGCTATGCTCGTCCAGTTT+TGG | 0.267428 | 8_1:-12594302 | Msa1179270:CDS |
| ATTCCAAGAGATGAAGCTTT+TGG | 0.274215 | 8_1:-12593964 | Msa1179270:CDS |
| TTAATTAGCTCTACTAAAAC+TGG | 0.280752 | 8_1:-12596087 | Msa1179270:CDS |
| TTCATCTGATGTGAAGTATA+TGG | 0.280760 | 8_1:+12591941 | None:intergenic |
| AGCAAGTGCATTTATATTCA+TGG | 0.295232 | 8_1:+12592426 | None:intergenic |
| GATATACCTTGAATTACTTT+AGG | 0.295263 | 8_1:+12593694 | None:intergenic |
| AAGTGAATGGTTCCAACATT+TGG | 0.295365 | 8_1:+12595738 | None:intergenic |
| AATCGATCCAAAGCCGTCTA+AGG | 0.318704 | 8_1:+12596155 | None:intergenic |
| CTTCAAAAGTTTATAAGGAT+TGG | 0.319001 | 8_1:-12592330 | Msa1179270:CDS |
| GTTAAGCTCTATGTGCTCTT+TGG | 0.319451 | 8_1:+12593173 | None:intergenic |
| ATAGATTGCTCTTACATTGT+TGG | 0.326610 | 8_1:+12595656 | None:intergenic |
| GATAGCAACTTTGGAATTCC+TGG | 0.326663 | 8_1:-12595828 | Msa1179270:CDS |
| GATACCCTTACTTCCTTTCT+GGG | 0.327976 | 8_1:-12596129 | Msa1179270:CDS |
| TTTGAATATGATAGCAACTT+TGG | 0.330629 | 8_1:-12595837 | Msa1179270:CDS |
| CAACTTCTTTCCACCAAGAT+TGG | 0.333148 | 8_1:+12591896 | None:intergenic |
| ACACAATAATTCCATATCTA+AGG | 0.334272 | 8_1:-12592989 | Msa1179270:CDS |
| TGATGGAACTTTAAAGCCTT+TGG | 0.342343 | 8_1:-12592907 | Msa1179270:CDS |
| TTATGATGTTTACAATGATT+TGG | 0.350830 | 8_1:-12594344 | Msa1179270:CDS |
| AGTGAATGGTTCCAACATTT+GGG | 0.361135 | 8_1:+12595739 | None:intergenic |
| TATGATGTTTACAATGATTT+GGG | 0.361274 | 8_1:-12594343 | Msa1179270:CDS |
| CTGCTAGATCCTCCCAAAAC+TGG | 0.365050 | 8_1:+12594289 | None:intergenic |
| TGGATGACTGATGAAGAATT+TGG | 0.366017 | 8_1:-12593388 | Msa1179270:CDS |
| TTCAAAAGTTTATAAGGATT+GGG | 0.366464 | 8_1:-12592329 | Msa1179270:CDS |
| AGCATAGCTTTGACCCTTAT+CGG | 0.368342 | 8_1:+12594315 | None:intergenic |
| CTGTTGATGGACTTGACATT+TGG | 0.369135 | 8_1:-12591998 | Msa1179270:CDS |
| ACACTGGTAAAGGACTAATT+TGG | 0.369984 | 8_1:+12593767 | None:intergenic |
| TTCACTTTGTTTGCAATTCG+TGG | 0.374078 | 8_1:-12595722 | Msa1179270:CDS |
| GAGCTCCTGCTCTCAGTGTT+AGG | 0.378311 | 8_1:+12593997 | None:intergenic |
| GCACATAGAGCTTAACTTAG+AGG | 0.378467 | 8_1:-12593166 | Msa1179270:CDS |
| TTAGAGTTGAAGACTTTAAG+AGG | 0.380397 | 8_1:-12594409 | Msa1179270:CDS |
| GAGTTTATTAGCCTTAGATA+TGG | 0.386116 | 8_1:+12592978 | None:intergenic |
| GCTTCAACACCTTCAATTGC+AGG | 0.390029 | 8_1:+12592819 | None:intergenic |
| TGCCCAAAAGCTTCATCTCT+TGG | 0.391374 | 8_1:+12593961 | None:intergenic |
| TCAAGTCCATCAACAGCATA+AGG | 0.396546 | 8_1:+12592005 | None:intergenic |
| TCTTCAACTCTAATTGTCTA+TGG | 0.397247 | 8_1:+12594419 | None:intergenic |
| CCTACACCTAAAGTAATTCA+AGG | 0.399993 | 8_1:-12593700 | Msa1179270:intron |
| CGAAGAAAATACGATCAGTT+TGG | 0.407190 | 8_1:+12595679 | None:intergenic |
| AAGTTTGCAGTATTATCATA+TGG | 0.408690 | 8_1:-12591801 | Msa1179270:three_prime_UTR |
| GCATAGCTTTGACCCTTATC+GGG | 0.410111 | 8_1:+12594316 | None:intergenic |
| TGTTGATGGACTTGACATTT+GGG | 0.412645 | 8_1:-12591997 | Msa1179270:CDS |
| GATTACCCTTATGCTGTTGA+TGG | 0.414001 | 8_1:-12592011 | Msa1179270:CDS |
| TCAAAGCTATCAAATTCATT+TGG | 0.414285 | 8_1:+12593844 | None:intergenic |
| ATTAACAATTTGCCAACATT+GGG | 0.424393 | 8_1:-12595888 | Msa1179270:CDS |
| GTCTACTTGCCTGCAATTGA+AGG | 0.425065 | 8_1:-12592828 | Msa1179270:CDS |
| TCAAATACAGATTGTATCAA+TGG | 0.425244 | 8_1:+12593880 | None:intergenic |
| TAAGATCAGCAGGGAGGGCT+TGG | 0.426671 | 8_1:+12592296 | None:intergenic |
| AAGCTAGATAGTGCAGTCTA+TGG | 0.426953 | 8_1:-12593216 | Msa1179270:CDS |
| GATGGAGCCTTAGACGGCTT+TGG | 0.427168 | 8_1:-12596162 | Msa1179270:CDS |
| CTGTTCGTTGCTATGACAAA+TGG | 0.429152 | 8_1:+12592505 | None:intergenic |
| GGCAGAAAACCAACAGCAAC+AGG | 0.431036 | 8_1:-12594238 | Msa1179270:intron |
| GGATGCAATAGTTTGTAAAT+AGG | 0.441730 | 8_1:+12592463 | None:intergenic |
| TTTGGAAGAGAGATCCTTGC+TGG | 0.443202 | 8_1:-12593370 | Msa1179270:CDS |
| TGATTTGGGTGACCCCGATA+AGG | 0.454794 | 8_1:-12594329 | Msa1179270:CDS |
| AAAAGAAGCTTATTTAAAAG+AGG | 0.461638 | 8_1:-12595913 | Msa1179270:CDS |
| AATTAACAATTTGCCAACAT+TGG | 0.462154 | 8_1:-12595889 | Msa1179270:CDS |
| TTTAATATGAAACCTCCATA+TGG | 0.462246 | 8_1:+12591736 | None:intergenic |
| GATTTGGGTGACCCCGATAA+GGG | 0.463228 | 8_1:-12594328 | Msa1179270:CDS |
| ACTTTAAGAGGAGATGGAAC+GGG | 0.464165 | 8_1:-12594397 | Msa1179270:CDS |
| GTGACTGGGGAAGGGAAACT+TGG | 0.464339 | 8_1:-12595936 | Msa1179270:CDS |
| ATCGACCCAGAAAGGAAGTA+AGG | 0.465974 | 8_1:+12596124 | None:intergenic |
| ACAAAACATGTACCTTTCTC+AGG | 0.466406 | 8_1:+12591685 | None:intergenic |
| GTTCTTCCCCTACGAGGATA+AGG | 0.466599 | 8_1:+12594262 | None:intergenic |
| TTGAAGACTTTAAGAGGAGA+TGG | 0.467418 | 8_1:-12594403 | Msa1179270:CDS |
| CGGTCTTCGTCTAGTGATAG+AGG | 0.479103 | 8_1:-12592033 | Msa1179270:CDS |
| TACTGTTTGGCTACTTGCCA+AGG | 0.479396 | 8_1:-12592796 | Msa1179270:CDS |
| AGGACTCTGAACTCCAATCT+TGG | 0.479531 | 8_1:-12591909 | Msa1179270:CDS |
| GTTTGTTTATCTCCCAATGT+TGG | 0.485044 | 8_1:+12595876 | None:intergenic |
| TCAGAAATCTTTAGAACTGA+TGG | 0.485324 | 8_1:-12593742 | Msa1179270:CDS |
| CAGCCTTCCTTATCCTCGTA+GGG | 0.487891 | 8_1:-12594269 | Msa1179270:CDS |
| TATCCTCGTAGGGGAAGAAC+GGG | 0.490906 | 8_1:-12594259 | Msa1179270:CDS |
| TCACTTTGTTTGCAATTCGT+GGG | 0.497142 | 8_1:-12595721 | Msa1179270:CDS |
| TATTGAAAAGACATTCTTGT+GGG | 0.498429 | 8_1:-12592374 | Msa1179270:CDS |
| ATTTCTGATAACACTGGTAA+AGG | 0.499377 | 8_1:+12593757 | None:intergenic |
| CAAGTCCATCAACAGCATAA+GGG | 0.500964 | 8_1:+12592006 | None:intergenic |
| TAAACCGTCCAACTCTTAGT+AGG | 0.502679 | 8_1:-12591717 | Msa1179270:three_prime_UTR |
| CATCCTCAAGGAGATCAATT+CGG | 0.504730 | 8_1:-12592864 | Msa1179270:CDS |
| AATTGATCTCCTTGAGGATG+TGG | 0.505930 | 8_1:+12592867 | None:intergenic |
| AATGCCATCTGCATTGACTA+AGG | 0.506196 | 8_1:+12592396 | None:intergenic |
| CCTTGAATTACTTTAGGTGT+AGG | 0.510768 | 8_1:+12593700 | None:intergenic |
| TTCACCAACTTGTCAGCCAC+TGG | 0.513084 | 8_1:-12592746 | Msa1179270:intron |
| CTATGGTAGACAAGTGGAGC+AGG | 0.515001 | 8_1:+12594436 | None:intergenic |
| CTTGATGATATCCCAAATGT+TGG | 0.515799 | 8_1:-12595750 | Msa1179270:CDS |
| CGAATTGCAAACAAAGTGAA+TGG | 0.525014 | 8_1:+12595725 | None:intergenic |
| AAGGATGGTTCTTGAAGCAT+AGG | 0.529557 | 8_1:+12592941 | None:intergenic |
| GACTTTAAGAGGAGATGGAA+CGG | 0.531242 | 8_1:-12594398 | Msa1179270:CDS |
| AAGGTGTTGAAGCTACTGTT+TGG | 0.533014 | 8_1:-12592809 | Msa1179270:CDS |
| GTTTACTATAACATAAGCCT+TGG | 0.534747 | 8_1:+12592779 | None:intergenic |
| AAAAGACATTCTTGTGGGGA+GGG | 0.536208 | 8_1:-12592369 | Msa1179270:CDS |
| GCAGCCTTCCTTATCCTCGT+AGG | 0.538537 | 8_1:-12594270 | Msa1179270:CDS |
| ATGTGGAAGACTTAGCTCAA+TGG | 0.546020 | 8_1:+12592884 | None:intergenic |
| CACATAGAGCTTAACTTAGA+GGG | 0.548086 | 8_1:-12593165 | Msa1179270:CDS |
| CATCAAGAGTCAAGCTCACA+AGG | 0.548278 | 8_1:+12595766 | None:intergenic |
| TCCCTGCTGATCTTATCAAA+AGG | 0.550271 | 8_1:-12592288 | Msa1179270:intron |
| TTATCCTCGTAGGGGAAGAA+CGG | 0.552637 | 8_1:-12594260 | Msa1179270:CDS |
| ACTCTGAACTCCAATCTTGG+TGG | 0.554147 | 8_1:-12591906 | Msa1179270:CDS |
| CTTTAGGTGTAGGAAACTTG+AGG | 0.557822 | 8_1:+12593710 | None:intergenic |
| TTTACCAGTGGCTGACAAGT+TGG | 0.560303 | 8_1:+12592742 | None:intergenic |
| GAAAAGACATTCTTGTGGGG+AGG | 0.560508 | 8_1:-12592370 | Msa1179270:CDS |
| TTTGGGAATGATAAGATCAA+AGG | 0.560979 | 8_1:-12596252 | Msa1179270:CDS |
| GTTGATGCAAAAGAATGTCT+TGG | 0.565743 | 8_1:-12596220 | Msa1179270:CDS |
| TTTGATAAGATCAGCAGGGA+GGG | 0.567663 | 8_1:+12592291 | None:intergenic |
| ATATTCAAATTCAATGCTGA+AGG | 0.568195 | 8_1:+12595851 | None:intergenic |
| ACAAATCGATCGACCCAGAA+AGG | 0.570019 | 8_1:+12596116 | None:intergenic |
| ATTATCGATGGAGCCTTAGA+CGG | 0.570364 | 8_1:-12596168 | Msa1179270:CDS |
| ATTTGGCTAAGTATATCTGT+TGG | 0.571311 | 8_1:+12593784 | None:intergenic |
| AGGCGATTAATGCCTGAGAA+AGG | 0.577051 | 8_1:-12591697 | Msa1179270:three_prime_UTR |
| GCAGATTCAACTTCCCCTCA+CGG | 0.579241 | 8_1:-12592053 | Msa1179270:CDS |
| ATAGTTTAACCTGTTGCTGT+TGG | 0.583389 | 8_1:+12594229 | None:intergenic |
| CTAAAGATTTCTGATAACAC+TGG | 0.584076 | 8_1:+12593751 | None:intergenic |
| TGGAAAGAAGTTGTAGAAGT+GGG | 0.584179 | 8_1:-12591886 | Msa1179270:exon |
| TTGGGATGCTATTAAGACAT+GGG | 0.586944 | 8_1:-12591979 | Msa1179270:CDS |
| GTGGAAAGAAGTTGTAGAAG+TGG | 0.591624 | 8_1:-12591887 | Msa1179270:exon |
| TTTGGGCAATATCCATATGG+AGG | 0.593205 | 8_1:-12591748 | Msa1179270:three_prime_UTR |
| CTTTAAGAGGAGATGGAACG+GGG | 0.596358 | 8_1:-12594396 | Msa1179270:CDS |
| CTAAGTCTTCCACATCCTCA+AGG | 0.600779 | 8_1:-12592876 | Msa1179270:CDS |
| TTCATGGTATCGCGATAATG+TGG | 0.601143 | 8_1:+12592442 | None:intergenic |
| TGATAAGATCAAAGGCACAT+TGG | 0.602959 | 8_1:-12596244 | Msa1179270:CDS |
| TTATTGAAAAGACATTCTTG+TGG | 0.603556 | 8_1:-12592375 | Msa1179270:CDS |
| AGTGGAGCAGGTGTTTCACT+TGG | 0.604250 | 8_1:+12594448 | None:intergenic |
| ATCGCCTACTAAGAGTTGGA+CGG | 0.607251 | 8_1:+12591713 | None:intergenic |
| TCCATAAACAAGAAAGTCTG+AGG | 0.610132 | 8_1:+12593930 | None:intergenic |
| ATTAATCGCCTACTAAGAGT+TGG | 0.610851 | 8_1:+12591709 | None:intergenic |
| TCATCCTTAGTCAATGCAGA+TGG | 0.613787 | 8_1:-12592400 | Msa1179270:CDS |
| GATATGGAATTATTGTGTCA+TGG | 0.613887 | 8_1:+12592994 | None:intergenic |
| AGCCAGGATTTACACCAGCA+AGG | 0.615323 | 8_1:+12593356 | None:intergenic |
| GATCCTACGAAGATTATCGA+TGG | 0.617689 | 8_1:-12596180 | Msa1179270:CDS |
| GATGTGCTTGATCTATATGA+AGG | 0.617798 | 8_1:-12593820 | Msa1179270:CDS |
| CTTGTGGGGAGGGTATGCTA+TGG | 0.619428 | 8_1:-12592359 | Msa1179270:CDS |
| CACTAGACGAAGACCGTGAG+GGG | 0.619721 | 8_1:+12592040 | None:intergenic |
| TTTGGGATGCTATTAAGACA+TGG | 0.620000 | 8_1:-12591980 | Msa1179270:CDS |
| GAAGTTGTAGAAGTGGGTCA+TGG | 0.620662 | 8_1:-12591880 | Msa1179270:exon |
| CTGCCCGTTCTTCCCCTACG+AGG | 0.621871 | 8_1:+12594256 | None:intergenic |
| AATTGTCTATGGTAGACAAG+TGG | 0.622093 | 8_1:+12594430 | None:intergenic |
| CAGATCCTAACACTGAGAGC+AGG | 0.624210 | 8_1:-12594002 | Msa1179270:CDS |
| AGAGGGTCTCACTGTTGATG+AGG | 0.625299 | 8_1:-12593148 | Msa1179270:intron |
| GAGTAGTGAGTAAGTCTGCA+TGG | 0.629429 | 8_1:-12593408 | Msa1179270:intron |
| TCGACCCAGAAAGGAAGTAA+GGG | 0.634087 | 8_1:+12596125 | None:intergenic |
| GTGACAAGAAAGACGAGCCA+TGG | 0.634560 | 8_1:-12591858 | Msa1179270:three_prime_UTR |
| AGACTTAGCTCAATGGCCAA+AGG | 0.639000 | 8_1:+12592891 | None:intergenic |
| CATAGCTTTGACCCTTATCG+GGG | 0.639540 | 8_1:+12594317 | None:intergenic |
| ATCACTAGACGAAGACCGTG+AGG | 0.640785 | 8_1:+12592038 | None:intergenic |
| GCTCCATCGATAATCTTCGT+AGG | 0.640888 | 8_1:+12596177 | None:intergenic |
| AACAGCTGCATGAAGAGCTG+AGG | 0.641558 | 8_1:+12591774 | None:intergenic |
| ATTGAAAAGACATTCTTGTG+GGG | 0.649770 | 8_1:-12592373 | Msa1179270:CDS |
| TTCCCCTACGAGGATAAGGA+AGG | 0.652522 | 8_1:+12594266 | None:intergenic |
| TCACTAGACGAAGACCGTGA+GGG | 0.653927 | 8_1:+12592039 | None:intergenic |
| TAATTAGCTCTACTAAAACT+GGG | 0.662126 | 8_1:-12596086 | Msa1179270:CDS |
| ACAAGAAAGACGAGCCATGG+TGG | 0.683058 | 8_1:-12591855 | Msa1179270:three_prime_UTR |
| ACACCGAATTGATCTCCTTG+AGG | 0.687282 | 8_1:+12592861 | None:intergenic |
| AGCCTTCCTTATCCTCGTAG+GGG | 0.699653 | 8_1:-12594268 | Msa1179270:CDS |
| GTGCTTGATCTATATGAAGG+AGG | 0.701156 | 8_1:-12593817 | Msa1179270:CDS |
| TTTAAGAGGAGATGGAACGG+GGG | 0.717332 | 8_1:-12594395 | Msa1179270:CDS |
| CAAGAGTCAAGCTCACAAGG+AGG | 0.745830 | 8_1:+12595769 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTAAAATAATAAAAAT+GGG | + | chr8_1:12593799-12593818 | None:intergenic | 0.0% |
| !!! | TAATAAGATAATAATTTTTC+GGG | - | chr8_1:12592430-12592449 | Msa1179270:CDS | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | + | chr8_1:12592478-12592497 | None:intergenic | 10.0% |
| !!! | TTATTAATTTATGATTTTCT+TGG | + | chr8_1:12592479-12592498 | None:intergenic | 10.0% |
| !! | ATAGTATAGAAAAAAATTAT+AGG | - | chr8_1:12592841-12592860 | Msa1179270:CDS | 10.0% |
| !! | TAGTATAGAAAAAAATTATA+GGG | - | chr8_1:12592842-12592861 | Msa1179270:CDS | 10.0% |
| !!! | TTTTTCTATGATATAATTTT+GGG | + | chr8_1:12593146-12593165 | None:intergenic | 10.0% |
| !!! | TTTTTTCTATGATATAATTT+TGG | + | chr8_1:12593147-12593166 | None:intergenic | 10.0% |
| !! | CAATAAAATTTAATAAAAGT+AGG | + | chr8_1:12593759-12593778 | None:intergenic | 10.0% |
| !!! | TTTTTTATTAAAAATGGTAA+AGG | - | chr8_1:12593821-12593840 | Msa1179270:CDS | 10.0% |
| !!! | AAACTCTTTAATTTAATACT+CGG | - | chr8_1:12592326-12592345 | Msa1179270:CDS | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | + | chr8_1:12592402-12592421 | None:intergenic | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | - | chr8_1:12592763-12592782 | Msa1179270:CDS | 15.0% |
| !!! | ATGTTGATGAAAATTTTTAT+AGG | - | chr8_1:12593042-12593061 | Msa1179270:intron | 15.0% |
| !!! | TGTTGATGAAAATTTTTATA+GGG | - | chr8_1:12593043-12593062 | Msa1179270:intron | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | - | chr8_1:12593102-12593121 | Msa1179270:intron | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | - | chr8_1:12593103-12593122 | Msa1179270:intron | 15.0% |
| !! | TGAATGATTGATTAAATTAA+AGG | - | chr8_1:12593198-12593217 | Msa1179270:CDS | 15.0% |
| !! | CACTTATTATTTGTTTAATA+AGG | + | chr8_1:12593239-12593258 | None:intergenic | 15.0% |
| !!! | TATGTTATTTAATATGTTAG+TGG | - | chr8_1:12593295-12593314 | Msa1179270:intron | 15.0% |
| !! | ACCAATAATAAAAATCTTAA+AGG | - | chr8_1:12593369-12593388 | Msa1179270:CDS | 15.0% |
| !! | CATACTAAATAAATCAAATT+TGG | + | chr8_1:12594846-12594865 | None:intergenic | 15.0% |
| !!! | CAAATTTGATTTATTTAGTA+TGG | - | chr8_1:12594844-12594863 | Msa1179270:intron | 15.0% |
| !! | AAAAGAAGCTTATTTAAAAG+AGG | - | chr8_1:12592026-12592045 | Msa1179270:CDS | 20.0% |
| !! | CTCTATAAATTAATAATGTC+AGG | + | chr8_1:12592790-12592809 | None:intergenic | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | + | chr8_1:12592885-12592904 | None:intergenic | 20.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | + | chr8_1:12592886-12592905 | None:intergenic | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | + | chr8_1:12593072-12593091 | None:intergenic | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr8_1:12593071-12593090 | None:intergenic | 20.0% |
| !!! | ACATTTTTCTTAAGCATTTT+AGG | - | chr8_1:12592949-12592968 | Msa1179270:CDS | 20.0% |
| !!! | CATTTTTCTTAAGCATTTTA+GGG | - | chr8_1:12592950-12592969 | Msa1179270:CDS | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+AGG | - | chr8_1:12593072-12593091 | Msa1179270:intron | 20.0% |
| !!! | TTTTGGGTTAATTAAGTAAA+TGG | + | chr8_1:12593130-12593149 | None:intergenic | 20.0% |
| !! | ATGATTGATTAAATTAAAGG+TGG | - | chr8_1:12593201-12593220 | Msa1179270:CDS | 20.0% |
| !!! | GCCTTTAAGATTTTTATTAT+TGG | + | chr8_1:12593373-12593392 | None:intergenic | 20.0% |
| !! | AACAACATTGAAAATTGAAA+GGG | + | chr8_1:12593399-12593418 | None:intergenic | 20.0% |
| !! | TAACAACATTGAAAATTGAA+AGG | + | chr8_1:12593400-12593419 | None:intergenic | 20.0% |
| !! | TTATGATGTTTACAATGATT+TGG | - | chr8_1:12593595-12593614 | Msa1179270:intron | 20.0% |
| !! | TATGATGTTTACAATGATTT+GGG | - | chr8_1:12593596-12593615 | Msa1179270:intron | 20.0% |
| !! | ACCTATAAAAAGTAATCTAA+GGG | + | chr8_1:12593851-12593870 | None:intergenic | 20.0% |
| !!! | AAAGTGTCATTTTAAAAACT+TGG | + | chr8_1:12594452-12594471 | None:intergenic | 20.0% |
| !!! | ATTTTCCAGAATAATATTAC+AGG | - | chr8_1:12594683-12594702 | Msa1179270:intron | 20.0% |
| !! | AAATTCCTGTAATATTATTC+TGG | + | chr8_1:12594691-12594710 | None:intergenic | 20.0% |
| !! | TGTTCAAAAAATTAATCACT+TGG | + | chr8_1:12594889-12594908 | None:intergenic | 20.0% |
| !!! | AAGTGATTAATTTTTTGAAC+AGG | - | chr8_1:12594888-12594907 | Msa1179270:intron | 20.0% |
| !! | GATATCTTCAAAAGTTTATA+AGG | - | chr8_1:12595604-12595623 | Msa1179270:intron | 20.0% |
| !! | TTCAAAAGTTTATAAGGATT+GGG | - | chr8_1:12595610-12595629 | Msa1179270:intron | 20.0% |
| !!! | CGATAGTTTTTTATAGTTAA+AGG | - | chr8_1:12595769-12595788 | Msa1179270:CDS | 20.0% |
| !!! | TGAATGATCATGATTTTATA+AGG | - | chr8_1:12595801-12595820 | Msa1179270:CDS | 20.0% |
| !! | TTTTAGTAGAGCTAATTAAC+TGG | + | chr8_1:12591851-12591870 | None:intergenic | 25.0% |
| !!! | TTAATTAGCTCTACTAAAAC+TGG | - | chr8_1:12591852-12591871 | Msa1179270:three_prime_UTR | 25.0% |
| !!! | TAATTAGCTCTACTAAAACT+GGG | - | chr8_1:12591853-12591872 | Msa1179270:three_prime_UTR | 25.0% |
| !!! | TAAATTAATTTGTACCGAGA+TGG | + | chr8_1:12591939-12591958 | None:intergenic | 25.0% |
| ! | AATTAACAATTTGCCAACAT+TGG | - | chr8_1:12592050-12592069 | Msa1179270:CDS | 25.0% |
| ! | ATTAACAATTTGCCAACATT+GGG | - | chr8_1:12592051-12592070 | Msa1179270:CDS | 25.0% |
| ! | ATATTCAAATTCAATGCTGA+AGG | + | chr8_1:12592091-12592110 | None:intergenic | 25.0% |
| ! | TTTGAATATGATAGCAACTT+TGG | - | chr8_1:12592102-12592121 | Msa1179270:intron | 25.0% |
| ! | TAAAGAGTTTCTACTGTATT+AGG | + | chr8_1:12592316-12592335 | None:intergenic | 25.0% |
| !! | GGAGATACCTTTATAATTTT+CGG | - | chr8_1:12592451-12592470 | Msa1179270:CDS | 25.0% |
| ! | TAAATTAATAATGTCAGGAC+CGG | + | chr8_1:12592785-12592804 | None:intergenic | 25.0% |
| !! | TGCTGATGGAAAATTTTTAT+AGG | - | chr8_1:12592981-12593000 | Msa1179270:CDS | 25.0% |
| !! | GCTGATGGAAAATTTTTATA+GGG | - | chr8_1:12592982-12593001 | Msa1179270:CDS | 25.0% |
| !! | ATGCTGATGGAAAATTTTAT+AGG | - | chr8_1:12593011-12593030 | Msa1179270:CDS | 25.0% |
| !! | TGCTGATGGAAAATTTTATA+GGG | - | chr8_1:12593012-12593031 | Msa1179270:CDS | 25.0% |
| !!! | ACCCTTAGATTACTTTTTAT+AGG | - | chr8_1:12593847-12593866 | Msa1179270:CDS | 25.0% |
| ! | CACCTATAAAAAGTAATCTA+AGG | + | chr8_1:12593852-12593871 | None:intergenic | 25.0% |
| ! | TCAAATACAGATTGTATCAA+TGG | + | chr8_1:12594062-12594081 | None:intergenic | 25.0% |
| ! | TCAAAGCTATCAAATTCATT+TGG | + | chr8_1:12594098-12594117 | None:intergenic | 25.0% |
| ! | GATATACCTTGAATTACTTT+AGG | + | chr8_1:12594248-12594267 | None:intergenic | 25.0% |
| ! | TTCAATTGTCAAAATATGAC+AGG | + | chr8_1:12594333-12594352 | None:intergenic | 25.0% |
| ! | TCCAATAATTAAGATTTGAC+CGG | - | chr8_1:12594398-12594417 | Msa1179270:CDS | 25.0% |
| ! | ACACAATAATTCCATATCTA+AGG | - | chr8_1:12594950-12594969 | Msa1179270:intron | 25.0% |
| !! | GTCACTAAATTTTACAACAA+AGG | + | chr8_1:12595320-12595339 | None:intergenic | 25.0% |
| ! | ATTTAGTGACATAATTAGAG+AGG | - | chr8_1:12595330-12595349 | Msa1179270:intron | 25.0% |
| ! | TACTCATAGTCAATTTAGAT+AGG | + | chr8_1:12595372-12595391 | None:intergenic | 25.0% |
| !! | TTGACTATGAGTAATTTTGA+TGG | - | chr8_1:12595379-12595398 | Msa1179270:intron | 25.0% |
| ! | TTATTGAAAAGACATTCTTG+TGG | - | chr8_1:12595564-12595583 | Msa1179270:intron | 25.0% |
| ! | TATTGAAAAGACATTCTTGT+GGG | - | chr8_1:12595565-12595584 | Msa1179270:intron | 25.0% |
| ! | CTTCAAAAGTTTATAAGGAT+TGG | - | chr8_1:12595609-12595628 | Msa1179270:intron | 25.0% |
| ! | TTCTTACAAATATACACCAA+TGG | - | chr8_1:12595677-12595696 | Msa1179270:CDS | 25.0% |
| ! | TATTGTGCTCTTGTTAATTT+AGG | - | chr8_1:12595851-12595870 | Msa1179270:CDS | 25.0% |
| ! | ATTGTGCTCTTGTTAATTTA+GGG | - | chr8_1:12595852-12595871 | Msa1179270:CDS | 25.0% |
| ! | AAGTTTGCAGTATTATCATA+TGG | - | chr8_1:12596138-12596157 | Msa1179270:CDS | 25.0% |
| ! | TTTAATATGAAACCTCCATA+TGG | + | chr8_1:12596206-12596225 | None:intergenic | 25.0% |
| TTTGGGAATGATAAGATCAA+AGG | - | chr8_1:12591687-12591706 | Msa1179270:three_prime_UTR | 30.0% | |
| AGACAAATTATTCTCCATCT+CGG | - | chr8_1:12591922-12591941 | Msa1179270:CDS | 30.0% | |
| !! | TATGCAAATTTTTCAGTGAC+TGG | - | chr8_1:12591988-12592007 | Msa1179270:CDS | 30.0% |
| !! | ATGCAAATTTTTCAGTGACT+GGG | - | chr8_1:12591989-12592008 | Msa1179270:CDS | 30.0% |
| ! | TTCTTAATTTTGAATGCTCC+AGG | + | chr8_1:12592132-12592151 | None:intergenic | 30.0% |
| ATAGATTGCTCTTACATTGT+TGG | + | chr8_1:12592286-12592305 | None:intergenic | 30.0% | |
| ACTATTGTGTTCATATGCAT+TGG | + | chr8_1:12592596-12592615 | None:intergenic | 30.0% | |
| !! | GACTAATTTGCCTTTTTGTT+TGG | - | chr8_1:12592670-12592689 | Msa1179270:intron | 30.0% |
| ACTGTACATACCAAACAAAA+AGG | + | chr8_1:12592683-12592702 | None:intergenic | 30.0% | |
| TGCTTAAGAAAAATGTCACA+AGG | + | chr8_1:12592945-12592964 | None:intergenic | 30.0% | |
| ATTTGATGTTACACACTTCA+AGG | + | chr8_1:12593444-12593463 | None:intergenic | 30.0% | |
| TCTTCAACTCTAATTGTCTA+TGG | + | chr8_1:12593523-12593542 | None:intergenic | 30.0% | |
| TTAGAGTTGAAGACTTTAAG+AGG | - | chr8_1:12593530-12593549 | Msa1179270:intron | 30.0% | |
| AACAGGTTAAACTATGTTCT+TGG | - | chr8_1:12593718-12593737 | Msa1179270:CDS | 30.0% | |
| ATTTGGCTAAGTATATCTGT+TGG | + | chr8_1:12594158-12594177 | None:intergenic | 30.0% | |
| ATTTCTGATAACACTGGTAA+AGG | + | chr8_1:12594185-12594204 | None:intergenic | 30.0% | |
| CTAAAGATTTCTGATAACAC+TGG | + | chr8_1:12594191-12594210 | None:intergenic | 30.0% | |
| !! | TCAGAAATCTTTAGAACTGA+TGG | - | chr8_1:12594197-12594216 | Msa1179270:intron | 30.0% |
| !! | ATAAGTGGTTGTTTTGCAAA+AGG | + | chr8_1:12594282-12594301 | None:intergenic | 30.0% |
| CAAGCAAAGAATTCAATAAG+TGG | + | chr8_1:12594297-12594316 | None:intergenic | 30.0% | |
| TCCGGTCAAATCTTAATTAT+TGG | + | chr8_1:12594402-12594421 | None:intergenic | 30.0% | |
| TGAACATGTTAAGCTTACTT+AGG | + | chr8_1:12594619-12594638 | None:intergenic | 30.0% | |
| ACTTGGTCAATTCTATTCAT+TGG | + | chr8_1:12594872-12594891 | None:intergenic | 30.0% | |
| GATATGGAATTATTGTGTCA+TGG | + | chr8_1:12594948-12594967 | None:intergenic | 30.0% | |
| !! | GAGTTTATTAGCCTTAGATA+TGG | + | chr8_1:12594964-12594983 | None:intergenic | 30.0% |
| !! | ATCACTTTTCAAGAAAAGGA+TGG | + | chr8_1:12595016-12595035 | None:intergenic | 30.0% |
| ! | ATCCTTTTCTTGAAAAGTGA+TGG | - | chr8_1:12595015-12595034 | Msa1179270:intron | 30.0% |
| !! | TTCCATCACTTTTCAAGAAA+AGG | + | chr8_1:12595020-12595039 | None:intergenic | 30.0% |
| GTTTACTATAACATAAGCCT+TGG | + | chr8_1:12595163-12595182 | None:intergenic | 30.0% | |
| !! | ATCAACTATGTTTTTACCAG+TGG | + | chr8_1:12595212-12595231 | None:intergenic | 30.0% |
| TACAACAAAGGAATTAGAGA+GGG | + | chr8_1:12595308-12595327 | None:intergenic | 30.0% | |
| TTACAACAAAGGAATTAGAG+AGG | + | chr8_1:12595309-12595328 | None:intergenic | 30.0% | |
| ! | GGATGCAATAGTTTGTAAAT+AGG | + | chr8_1:12595479-12595498 | None:intergenic | 30.0% |
| AGCAAGTGCATTTATATTCA+TGG | + | chr8_1:12595516-12595535 | None:intergenic | 30.0% | |
| ATTGAAAAGACATTCTTGTG+GGG | - | chr8_1:12595566-12595585 | Msa1179270:intron | 30.0% | |
| ATCTCAAATCCATCACTAAT+CGG | + | chr8_1:12595719-12595738 | None:intergenic | 30.0% | |
| !!! | AGTGATGGATTTGAGATTTT+CGG | - | chr8_1:12595722-12595741 | Msa1179270:CDS | 30.0% |
| TATAGTGACCAACATAGTTA+GGG | + | chr8_1:12595749-12595768 | None:intergenic | 30.0% | |
| TTGTGCTCTTGTTAATTTAG+GGG | - | chr8_1:12595853-12595872 | Msa1179270:CDS | 30.0% | |
| TTCATCTGATGTGAAGTATA+TGG | + | chr8_1:12596001-12596020 | None:intergenic | 30.0% | |
| ! | TTCATGCAGCTGTTAATTTT+GGG | - | chr8_1:12596174-12596193 | Msa1179270:CDS | 30.0% |
| ! | AATTTTGGGCAATATCCATA+TGG | - | chr8_1:12596188-12596207 | Msa1179270:CDS | 30.0% |
| ! | TGATAAGATCAAAGGCACAT+TGG | - | chr8_1:12591695-12591714 | Msa1179270:three_prime_UTR | 35.0% |
| GTTGATGCAAAAGAATGTCT+TGG | - | chr8_1:12591719-12591738 | Msa1179270:three_prime_UTR | 35.0% | |
| !! | TGCAAATTTTTCAGTGACTG+GGG | - | chr8_1:12591990-12592009 | Msa1179270:CDS | 35.0% |
| GTTTGTTTATCTCCCAATGT+TGG | + | chr8_1:12592066-12592085 | None:intergenic | 35.0% | |
| ! | CTTGATGATATCCCAAATGT+TGG | - | chr8_1:12592189-12592208 | Msa1179270:intron | 35.0% |
| AGTGAATGGTTCCAACATTT+GGG | + | chr8_1:12592203-12592222 | None:intergenic | 35.0% | |
| AAGTGAATGGTTCCAACATT+TGG | + | chr8_1:12592204-12592223 | None:intergenic | 35.0% | |
| CGAATTGCAAACAAAGTGAA+TGG | + | chr8_1:12592217-12592236 | None:intergenic | 35.0% | |
| ! | TTCACTTTGTTTGCAATTCG+TGG | - | chr8_1:12592217-12592236 | Msa1179270:intron | 35.0% |
| ! | TCACTTTGTTTGCAATTCGT+GGG | - | chr8_1:12592218-12592237 | Msa1179270:intron | 35.0% |
| CGAAGAAAATACGATCAGTT+TGG | + | chr8_1:12592263-12592282 | None:intergenic | 35.0% | |
| !!! | TTTTTTACATTGGCCCAAGT+CGG | + | chr8_1:12592392-12592411 | None:intergenic | 35.0% |
| CTTGGGACCGAAAATTATAA+AGG | + | chr8_1:12592461-12592480 | None:intergenic | 35.0% | |
| GTACAGTAAATGTAGACAAG+AGG | + | chr8_1:12592552-12592571 | None:intergenic | 35.0% | |
| ATAATTTACGTTGAGTCCCA+AGG | - | chr8_1:12592618-12592637 | Msa1179270:intron | 35.0% | |
| TTAGGGACTAAAAATGCTGA+TGG | - | chr8_1:12592967-12592986 | Msa1179270:CDS | 35.0% | |
| TATAGGGACTAAAATGCTGA+TGG | - | chr8_1:12592998-12593017 | Msa1179270:CDS | 35.0% | |
| TAAATTAAAGGTGGTGAGTG+TGG | - | chr8_1:12593210-12593229 | Msa1179270:CDS | 35.0% | |
| AATTGTCTATGGTAGACAAG+TGG | + | chr8_1:12593512-12593531 | None:intergenic | 35.0% | |
| ! | TTGAAGACTTTAAGAGGAGA+TGG | - | chr8_1:12593536-12593555 | Msa1179270:intron | 35.0% |
| ATAGTTTAACCTGTTGCTGT+TGG | + | chr8_1:12593713-12593732 | None:intergenic | 35.0% | |
| ! | ATTCCAAGAGATGAAGCTTT+TGG | - | chr8_1:12593975-12593994 | Msa1179270:CDS | 35.0% |
| ! | TTCCAAGAGATGAAGCTTTT+GGG | - | chr8_1:12593976-12593995 | Msa1179270:CDS | 35.0% |
| ! | TCCTCAGACTTTCTTGTTTA+TGG | - | chr8_1:12594008-12594027 | Msa1179270:intron | 35.0% |
| TCCATAAACAAGAAAGTCTG+AGG | + | chr8_1:12594012-12594031 | None:intergenic | 35.0% | |
| GATGTGCTTGATCTATATGA+AGG | - | chr8_1:12594119-12594138 | Msa1179270:intron | 35.0% | |
| ACACTGGTAAAGGACTAATT+TGG | + | chr8_1:12594175-12594194 | None:intergenic | 35.0% | |
| CCTTGAATTACTTTAGGTGT+AGG | + | chr8_1:12594242-12594261 | None:intergenic | 35.0% | |
| CCTACACCTAAAGTAATTCA+AGG | - | chr8_1:12594239-12594258 | Msa1179270:CDS | 35.0% | |
| ATATGACAGGAGAGACATAA+AGG | + | chr8_1:12594320-12594339 | None:intergenic | 35.0% | |
| TGGATGACTGATGAAGAATT+TGG | - | chr8_1:12594551-12594570 | Msa1179270:intron | 35.0% | |
| !!! | CTATCTAGCTTACTTTTTGG+AGG | + | chr8_1:12594714-12594733 | None:intergenic | 35.0% |
| !! | GCACTATCTAGCTTACTTTT+TGG | + | chr8_1:12594717-12594736 | None:intergenic | 35.0% |
| CACATAGAGCTTAACTTAGA+GGG | - | chr8_1:12594774-12594793 | Msa1179270:intron | 35.0% | |
| !! | TGATGGAACTTTAAAGCCTT+TGG | - | chr8_1:12595032-12595051 | Msa1179270:intron | 35.0% |
| GAATTAGAGAGGGAATTCAT+TGG | + | chr8_1:12595298-12595317 | None:intergenic | 35.0% | |
| !!! | GAGTAATTTTGATGGATTGC+AGG | - | chr8_1:12595387-12595406 | Msa1179270:intron | 35.0% |
| ! | ACCTTTTGATAAGATCAGCA+GGG | + | chr8_1:12595655-12595674 | None:intergenic | 35.0% |
| ! | TACCTTTTGATAAGATCAGC+AGG | + | chr8_1:12595656-12595675 | None:intergenic | 35.0% |
| TCACAAACTCATTTAGCCAT+TGG | + | chr8_1:12595696-12595715 | None:intergenic | 35.0% | |
| GTATAGTGACCAACATAGTT+AGG | + | chr8_1:12595750-12595769 | None:intergenic | 35.0% | |
| !! | TGTTGATGGACTTGACATTT+GGG | - | chr8_1:12595942-12595961 | Msa1179270:intron | 35.0% |
| ! | TTTGGGATGCTATTAAGACA+TGG | - | chr8_1:12595959-12595978 | Msa1179270:intron | 35.0% |
| TTGGGATGCTATTAAGACAT+GGG | - | chr8_1:12595960-12595979 | Msa1179270:intron | 35.0% | |
| CATCAGATGAAAAATTCAGC+AGG | - | chr8_1:12596010-12596029 | Msa1179270:intron | 35.0% | |
| TGGAAAGAAGTTGTAGAAGT+GGG | - | chr8_1:12596053-12596072 | Msa1179270:intron | 35.0% | |
| ! | CTTCATGCAGCTGTTAATTT+TGG | - | chr8_1:12596173-12596192 | Msa1179270:CDS | 35.0% |
| ATTAATCGCCTACTAAGAGT+TGG | + | chr8_1:12596233-12596252 | None:intergenic | 35.0% | |
| ACAAAACATGTACCTTTCTC+AGG | + | chr8_1:12596257-12596276 | None:intergenic | 35.0% | |
| GATCCTACGAAGATTATCGA+TGG | - | chr8_1:12591759-12591778 | Msa1179270:three_prime_UTR | 40.0% | |
| ATTATCGATGGAGCCTTAGA+CGG | - | chr8_1:12591771-12591790 | Msa1179270:three_prime_UTR | 40.0% | |
| GATACCCTTACTTCCTTTCT+GGG | - | chr8_1:12591810-12591829 | Msa1179270:three_prime_UTR | 40.0% | |
| !! | AATTTTTCAGTGACTGGGGA+AGG | - | chr8_1:12591994-12592013 | Msa1179270:CDS | 40.0% |
| !! | ATTTTTCAGTGACTGGGGAA+GGG | - | chr8_1:12591995-12592014 | Msa1179270:CDS | 40.0% |
| !! | GATAGCAACTTTGGAATTCC+TGG | - | chr8_1:12592111-12592130 | Msa1179270:intron | 40.0% |
| ! | TTTTTACATTGGCCCAAGTC+GGG | + | chr8_1:12592391-12592410 | None:intergenic | 40.0% |
| ATTACGTTGTAGCGAACCTT+GGG | + | chr8_1:12592637-12592656 | None:intergenic | 40.0% | |
| AATTACGTTGTAGCGAACCT+TGG | + | chr8_1:12592638-12592657 | None:intergenic | 40.0% | |
| CGCTACAACGTAATTCTAAG+AGG | - | chr8_1:12592643-12592662 | Msa1179270:intron | 40.0% | |
| ! | GACTTTAAGAGGAGATGGAA+CGG | - | chr8_1:12593541-12593560 | Msa1179270:intron | 40.0% |
| ! | ACTTTAAGAGGAGATGGAAC+GGG | - | chr8_1:12593542-12593561 | Msa1179270:intron | 40.0% |
| !! | AGCATAGCTTTGACCCTTAT+CGG | + | chr8_1:12593627-12593646 | None:intergenic | 40.0% |
| GTGCTTGATCTATATGAAGG+AGG | - | chr8_1:12594122-12594141 | Msa1179270:intron | 40.0% | |
| CTTTAGGTGTAGGAAACTTG+AGG | + | chr8_1:12594232-12594251 | None:intergenic | 40.0% | |
| !! | GTGGTTGTTTTGCAAAAGGT+AGG | + | chr8_1:12594278-12594297 | None:intergenic | 40.0% |
| AACTCTTTCATCGATCTCTC+CGG | + | chr8_1:12594420-12594439 | None:intergenic | 40.0% | |
| AAGCTAGATAGTGCAGTCTA+TGG | - | chr8_1:12594723-12594742 | Msa1179270:intron | 40.0% | |
| GTTAAGCTCTATGTGCTCTT+TGG | + | chr8_1:12594769-12594788 | None:intergenic | 40.0% | |
| GCACATAGAGCTTAACTTAG+AGG | - | chr8_1:12594773-12594792 | Msa1179270:intron | 40.0% | |
| ! | TCTTGAAGCATAGGCTTTTG+TGG | + | chr8_1:12594992-12595011 | None:intergenic | 40.0% |
| AAGGATGGTTCTTGAAGCAT+AGG | + | chr8_1:12595001-12595020 | None:intergenic | 40.0% | |
| ATGTGGAAGACTTAGCTCAA+TGG | + | chr8_1:12595058-12595077 | None:intergenic | 40.0% | |
| AATTGATCTCCTTGAGGATG+TGG | + | chr8_1:12595075-12595094 | None:intergenic | 40.0% | |
| CATCCTCAAGGAGATCAATT+CGG | - | chr8_1:12595075-12595094 | Msa1179270:intron | 40.0% | |
| !! | AAGGTGTTGAAGCTACTGTT+TGG | - | chr8_1:12595130-12595149 | Msa1179270:intron | 40.0% |
| CTGTTCGTTGCTATGACAAA+TGG | + | chr8_1:12595437-12595456 | None:intergenic | 40.0% | |
| TTCATGGTATCGCGATAATG+TGG | + | chr8_1:12595500-12595519 | None:intergenic | 40.0% | |
| TCATCCTTAGTCAATGCAGA+TGG | - | chr8_1:12595539-12595558 | Msa1179270:intron | 40.0% | |
| !! | AATGCCATCTGCATTGACTA+AGG | + | chr8_1:12595546-12595565 | None:intergenic | 40.0% |
| AAAAGACATTCTTGTGGGGA+GGG | - | chr8_1:12595570-12595589 | Msa1179270:intron | 40.0% | |
| TTTGATAAGATCAGCAGGGA+GGG | + | chr8_1:12595651-12595670 | None:intergenic | 40.0% | |
| ! | TTTTGATAAGATCAGCAGGG+AGG | + | chr8_1:12595652-12595671 | None:intergenic | 40.0% |
| TCCCTGCTGATCTTATCAAA+AGG | - | chr8_1:12595651-12595670 | Msa1179270:intron | 40.0% | |
| AGTTTGTGACCGATTAGTGA+TGG | - | chr8_1:12595707-12595726 | Msa1179270:CDS | 40.0% | |
| ! | TTTTCGGTCCCTAACTATGT+TGG | - | chr8_1:12595738-12595757 | Msa1179270:CDS | 40.0% |
| GATTACCCTTATGCTGTTGA+TGG | - | chr8_1:12595928-12595947 | Msa1179270:CDS | 40.0% | |
| CAAGTCCATCAACAGCATAA+GGG | + | chr8_1:12595936-12595955 | None:intergenic | 40.0% | |
| TCAAGTCCATCAACAGCATA+AGG | + | chr8_1:12595937-12595956 | None:intergenic | 40.0% | |
| !! | CTGTTGATGGACTTGACATT+TGG | - | chr8_1:12595941-12595960 | Msa1179270:intron | 40.0% |
| CAACTTCTTTCCACCAAGAT+TGG | + | chr8_1:12596046-12596065 | None:intergenic | 40.0% | |
| GTGGAAAGAAGTTGTAGAAG+TGG | - | chr8_1:12596052-12596071 | Msa1179270:intron | 40.0% | |
| ! | TCTTCGCGAGTTTGCATTTT+CGG | + | chr8_1:12596110-12596129 | None:intergenic | 40.0% |
| TTTGGGCAATATCCATATGG+AGG | - | chr8_1:12596191-12596210 | Msa1179270:CDS | 40.0% | |
| TAAACCGTCCAACTCTTAGT+AGG | - | chr8_1:12596222-12596241 | Msa1179270:CDS | 40.0% | |
| GCTCCATCGATAATCTTCGT+AGG | + | chr8_1:12591765-12591784 | None:intergenic | 45.0% | |
| AATCGATCCAAAGCCGTCTA+AGG | + | chr8_1:12591787-12591806 | None:intergenic | 45.0% | |
| CGATACCCTTACTTCCTTTC+TGG | - | chr8_1:12591809-12591828 | Msa1179270:three_prime_UTR | 45.0% | |
| TCGACCCAGAAAGGAAGTAA+GGG | + | chr8_1:12591817-12591836 | None:intergenic | 45.0% | |
| ATCGACCCAGAAAGGAAGTA+AGG | + | chr8_1:12591818-12591837 | None:intergenic | 45.0% | |
| ACAAATCGATCGACCCAGAA+AGG | + | chr8_1:12591826-12591845 | None:intergenic | 45.0% | |
| CATCAAGAGTCAAGCTCACA+AGG | + | chr8_1:12592176-12592195 | None:intergenic | 45.0% | |
| AAATTTGTCCGATCCCGACT+TGG | - | chr8_1:12592375-12592394 | Msa1179270:CDS | 45.0% | |
| AATTTGTCCGATCCCGACTT+GGG | - | chr8_1:12592376-12592395 | Msa1179270:CDS | 45.0% | |
| ! | CTTTAAGAGGAGATGGAACG+GGG | - | chr8_1:12593543-12593562 | Msa1179270:intron | 45.0% |
| TTTAAGAGGAGATGGAACGG+GGG | - | chr8_1:12593544-12593563 | Msa1179270:intron | 45.0% | |
| !! | CATAGCTTTGACCCTTATCG+GGG | + | chr8_1:12593625-12593644 | None:intergenic | 45.0% |
| !! | GCATAGCTTTGACCCTTATC+GGG | + | chr8_1:12593626-12593645 | None:intergenic | 45.0% |
| ! | AAGCTATGCTCGTCCAGTTT+TGG | - | chr8_1:12593637-12593656 | Msa1179270:intron | 45.0% |
| ! | AGCTATGCTCGTCCAGTTTT+GGG | - | chr8_1:12593638-12593657 | Msa1179270:intron | 45.0% |
| TTATCCTCGTAGGGGAAGAA+CGG | - | chr8_1:12593679-12593698 | Msa1179270:intron | 45.0% | |
| TGCCCAAAAGCTTCATCTCT+TGG | + | chr8_1:12593981-12594000 | None:intergenic | 45.0% | |
| GAGTAGTGAGTAAGTCTGCA+TGG | - | chr8_1:12594531-12594550 | Msa1179270:intron | 45.0% | |
| TTTGGAAGAGAGATCCTTGC+TGG | - | chr8_1:12594569-12594588 | Msa1179270:intron | 45.0% | |
| ATCCTTGCTGGTGTAAATCC+TGG | - | chr8_1:12594581-12594600 | Msa1179270:intron | 45.0% | |
| AGACTTAGCTCAATGGCCAA+AGG | + | chr8_1:12595051-12595070 | None:intergenic | 45.0% | |
| CTAAGTCTTCCACATCCTCA+AGG | - | chr8_1:12595063-12595082 | Msa1179270:intron | 45.0% | |
| ACACCGAATTGATCTCCTTG+AGG | + | chr8_1:12595081-12595100 | None:intergenic | 45.0% | |
| GTCTACTTGCCTGCAATTGA+AGG | - | chr8_1:12595111-12595130 | Msa1179270:intron | 45.0% | |
| GCTTCAACACCTTCAATTGC+AGG | + | chr8_1:12595123-12595142 | None:intergenic | 45.0% | |
| TACTGTTTGGCTACTTGCCA+AGG | - | chr8_1:12595143-12595162 | Msa1179270:intron | 45.0% | |
| TTTACCAGTGGCTGACAAGT+TGG | + | chr8_1:12595200-12595219 | None:intergenic | 45.0% | |
| GAAAAGACATTCTTGTGGGG+AGG | - | chr8_1:12595569-12595588 | Msa1179270:intron | 45.0% | |
| AGGACTCTGAACTCCAATCT+TGG | - | chr8_1:12596030-12596049 | Msa1179270:intron | 45.0% | |
| ACTCTGAACTCCAATCTTGG+TGG | - | chr8_1:12596033-12596052 | Msa1179270:intron | 45.0% | |
| GAAGTTGTAGAAGTGGGTCA+TGG | - | chr8_1:12596059-12596078 | Msa1179270:intron | 45.0% | |
| ATCGCCTACTAAGAGTTGGA+CGG | + | chr8_1:12596229-12596248 | None:intergenic | 45.0% | |
| AGGCGATTAATGCCTGAGAA+AGG | - | chr8_1:12596242-12596261 | Msa1179270:CDS | 45.0% | |
| !!! | ATAATAAGATAATAATTTTT+CGG | - | chr8_1:12592429-12592448 | Msa1179270:CDS | 5.0% |
| !!! | GAAATTTAAAATAATAAAAA+TGG | + | chr8_1:12593800-12593819 | None:intergenic | 5.0% |
| !!! | ATTTCATTTTTTATTAAAAA+TGG | - | chr8_1:12593815-12593834 | Msa1179270:CDS | 5.0% |
| !!! | AAAAATATATTAAGATTTTA+TGG | - | chr8_1:12594490-12594509 | Msa1179270:intron | 5.0% |
| CAAGAGTCAAGCTCACAAGG+AGG | + | chr8_1:12592173-12592192 | None:intergenic | 50.0% | |
| AGTGGAGCAGGTGTTTCACT+TGG | + | chr8_1:12593494-12593513 | None:intergenic | 50.0% | |
| CTATGGTAGACAAGTGGAGC+AGG | + | chr8_1:12593506-12593525 | None:intergenic | 50.0% | |
| ! | TGATTTGGGTGACCCCGATA+AGG | - | chr8_1:12593610-12593629 | Msa1179270:intron | 50.0% |
| GATTTGGGTGACCCCGATAA+GGG | - | chr8_1:12593611-12593630 | Msa1179270:intron | 50.0% | |
| !!! | TATGCTCGTCCAGTTTTGGG+AGG | - | chr8_1:12593641-12593660 | Msa1179270:intron | 50.0% |
| CTGCTAGATCCTCCCAAAAC+TGG | + | chr8_1:12593653-12593672 | None:intergenic | 50.0% | |
| CAGCCTTCCTTATCCTCGTA+GGG | - | chr8_1:12593670-12593689 | Msa1179270:intron | 50.0% | |
| AGCCTTCCTTATCCTCGTAG+GGG | - | chr8_1:12593671-12593690 | Msa1179270:intron | 50.0% | |
| TTCCCCTACGAGGATAAGGA+AGG | + | chr8_1:12593676-12593695 | None:intergenic | 50.0% | |
| GTTCTTCCCCTACGAGGATA+AGG | + | chr8_1:12593680-12593699 | None:intergenic | 50.0% | |
| TATCCTCGTAGGGGAAGAAC+GGG | - | chr8_1:12593680-12593699 | Msa1179270:intron | 50.0% | |
| GGCAGAAAACCAACAGCAAC+AGG | - | chr8_1:12593701-12593720 | Msa1179270:CDS | 50.0% | |
| CAGATCCTAACACTGAGAGC+AGG | - | chr8_1:12593937-12593956 | Msa1179270:CDS | 50.0% | |
| AGCCAGGATTTACACCAGCA+AGG | + | chr8_1:12594586-12594605 | None:intergenic | 50.0% | |
| CTTAGGCTGCGAATTAAGCC+AGG | + | chr8_1:12594602-12594621 | None:intergenic | 50.0% | |
| AGAGGGTCTCACTGTTGATG+AGG | - | chr8_1:12594791-12594810 | Msa1179270:intron | 50.0% | |
| TTCACCAACTTGTCAGCCAC+TGG | - | chr8_1:12595193-12595212 | Msa1179270:intron | 50.0% | |
| GCAGATTCAACTTCCCCTCA+CGG | - | chr8_1:12595886-12595905 | Msa1179270:CDS | 50.0% | |
| TCACTAGACGAAGACCGTGA+GGG | + | chr8_1:12595903-12595922 | None:intergenic | 50.0% | |
| ATCACTAGACGAAGACCGTG+AGG | + | chr8_1:12595904-12595923 | None:intergenic | 50.0% | |
| CGGTCTTCGTCTAGTGATAG+AGG | - | chr8_1:12595906-12595925 | Msa1179270:CDS | 50.0% | |
| GTGACAAGAAAGACGAGCCA+TGG | - | chr8_1:12596081-12596100 | Msa1179270:intron | 50.0% | |
| ACAAGAAAGACGAGCCATGG+TGG | - | chr8_1:12596084-12596103 | Msa1179270:intron | 50.0% | |
| ! | GTTTGCATTTTCGGCCACCA+TGG | + | chr8_1:12596101-12596120 | None:intergenic | 50.0% |
| AACAGCTGCATGAAGAGCTG+AGG | + | chr8_1:12596168-12596187 | None:intergenic | 50.0% | |
| GATGGAGCCTTAGACGGCTT+TGG | - | chr8_1:12591777-12591796 | Msa1179270:three_prime_UTR | 55.0% | |
| GTGACTGGGGAAGGGAAACT+TGG | - | chr8_1:12592003-12592022 | Msa1179270:CDS | 55.0% | |
| ACATTGGCCCAAGTCGGGAT+CGG | + | chr8_1:12592386-12592405 | None:intergenic | 55.0% | |
| ! | AACGGGGGAGCGCAAAGAAT+GGG | - | chr8_1:12593559-12593578 | Msa1179270:intron | 55.0% |
| GCAGCCTTCCTTATCCTCGT+AGG | - | chr8_1:12593669-12593688 | Msa1179270:intron | 55.0% | |
| GAGCTCCTGCTCTCAGTGTT+AGG | + | chr8_1:12593945-12593964 | None:intergenic | 55.0% | |
| ! | CTTGTGGGGAGGGTATGCTA+TGG | - | chr8_1:12595580-12595599 | Msa1179270:intron | 55.0% |
| TAAGATCAGCAGGGAGGGCT+TGG | + | chr8_1:12595646-12595665 | None:intergenic | 55.0% | |
| CACTAGACGAAGACCGTGAG+GGG | + | chr8_1:12595902-12595921 | None:intergenic | 55.0% | |
| ! | GAACGGGGGAGCGCAAAGAA+TGG | - | chr8_1:12593558-12593577 | Msa1179270:intron | 60.0% |
| CTGCCCGTTCTTCCCCTACG+AGG | + | chr8_1:12593686-12593705 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 12591675 | 12596286 | 12591675 | ID=Msa1179270;Name=Msa1179270 |
| chr8_1 | mRNA | 12591675 | 12596286 | 12591675 | ID=Msa1179270-mRNA-1;Parent=Msa1179270;Name=Msa1179270-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.87|0.66|1|1|1|9|218|659 |
| chr8_1 | exon | 12591675 | 12592088 | 12591675 | ID=Msa1179270-mRNA-1:exon:4580;Parent=Msa1179270-mRNA-1 |
| chr8_1 | exon | 12592289 | 12592552 | 12592289 | ID=Msa1179270-mRNA-1:exon:4579;Parent=Msa1179270-mRNA-1 |
| chr8_1 | exon | 12592747 | 12593051 | 12592747 | ID=Msa1179270-mRNA-1:exon:4578;Parent=Msa1179270-mRNA-1 |
| chr8_1 | exon | 12593149 | 12593256 | 12593149 | ID=Msa1179270-mRNA-1:exon:4577;Parent=Msa1179270-mRNA-1 |
| chr8_1 | exon | 12593369 | 12593424 | 12593369 | ID=Msa1179270-mRNA-1:exon:4576;Parent=Msa1179270-mRNA-1 |
| chr8_1 | exon | 12593701 | 12594021 | 12593701 | ID=Msa1179270-mRNA-1:exon:4575;Parent=Msa1179270-mRNA-1 |
| chr8_1 | exon | 12594239 | 12594479 | 12594239 | ID=Msa1179270-mRNA-1:exon:4574;Parent=Msa1179270-mRNA-1 |
| chr8_1 | exon | 12595671 | 12595957 | 12595671 | ID=Msa1179270-mRNA-1:exon:4573;Parent=Msa1179270-mRNA-1 |
| chr8_1 | exon | 12596085 | 12596286 | 12596085 | ID=Msa1179270-mRNA-1:exon:4572;Parent=Msa1179270-mRNA-1 |
| chr8_1 | CDS | 12596085 | 12596286 | 12596085 | ID=Msa1179270-mRNA-1:cds;Parent=Msa1179270-mRNA-1 |
| chr8_1 | CDS | 12595671 | 12595957 | 12595671 | ID=Msa1179270-mRNA-1:cds;Parent=Msa1179270-mRNA-1 |
| chr8_1 | CDS | 12594239 | 12594479 | 12594239 | ID=Msa1179270-mRNA-1:cds;Parent=Msa1179270-mRNA-1 |
| chr8_1 | CDS | 12593701 | 12594021 | 12593701 | ID=Msa1179270-mRNA-1:cds;Parent=Msa1179270-mRNA-1 |
| chr8_1 | CDS | 12593369 | 12593424 | 12593369 | ID=Msa1179270-mRNA-1:cds;Parent=Msa1179270-mRNA-1 |
| chr8_1 | CDS | 12593149 | 12593256 | 12593149 | ID=Msa1179270-mRNA-1:cds;Parent=Msa1179270-mRNA-1 |
| chr8_1 | CDS | 12592747 | 12593051 | 12592747 | ID=Msa1179270-mRNA-1:cds;Parent=Msa1179270-mRNA-1 |
| chr8_1 | CDS | 12592289 | 12592552 | 12592289 | ID=Msa1179270-mRNA-1:cds;Parent=Msa1179270-mRNA-1 |
| chr8_1 | CDS | 12591893 | 12592088 | 12591893 | ID=Msa1179270-mRNA-1:cds;Parent=Msa1179270-mRNA-1 |
| chr8_1 | three_prime_UTR | 12591675 | 12591892 | 12591675 | ID=Msa1179270-mRNA-1:three_prime_utr;Parent=Msa1179270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
