Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942710 | XP_003618859.1 | 93.609 | 266 | 16 | 1 | 13 | 277 | 1 | 266 | 0.0 | 508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942710 | sp|A0A3Q8GYY4|NEPS2_NEPRA | 55.731 | 253 | 109 | 2 | 25 | 274 | 7 | 259 | 1.65e-91 | 275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0640500 | Msa0942710 | 0.802086 | 6.629910e-49 | -8.615850e-47 |
| Msa0644030 | Msa0942710 | 0.812325 | 4.486397e-51 | -8.615850e-47 |
| Msa0679100 | Msa0942710 | 0.810160 | 1.323011e-50 | -8.615850e-47 |
| Msa0687230 | Msa0942710 | 0.807602 | 4.664954e-50 | -8.615850e-47 |
| Msa0751010 | Msa0942710 | 0.801770 | 7.699264e-49 | -8.615850e-47 |
| Msa0794050 | Msa0942710 | 0.810868 | 9.305838e-51 | -8.615850e-47 |
| Msa0818770 | Msa0942710 | 0.817040 | 4.053243e-52 | -8.615850e-47 |
| Msa0822170 | Msa0942710 | 0.808241 | 3.411111e-50 | -8.615850e-47 |
| Msa0825270 | Msa0942710 | 0.807522 | 4.852251e-50 | -8.615850e-47 |
| Msa0147980 | Msa0942710 | 0.800937 | 1.140153e-48 | -8.615850e-47 |
| Msa0384670 | Msa0942710 | 0.814503 | 1.490731e-51 | -8.615850e-47 |
| Msa0434570 | Msa0942710 | 0.814656 | 1.378710e-51 | -8.615850e-47 |
| Msa0434770 | Msa0942710 | 0.819487 | 1.131882e-52 | -8.615850e-47 |
| Msa0436200 | Msa0942710 | 0.800295 | 1.541070e-48 | -8.615850e-47 |
| Msa0478580 | Msa0942710 | 0.826648 | 2.417945e-54 | -8.615850e-47 |
| Msa0518030 | Msa0942710 | 0.803232 | 3.845425e-49 | -8.615850e-47 |
| Msa0547990 | Msa0942710 | 0.805994 | 1.020220e-49 | -8.615850e-47 |
| Msa0905990 | Msa0942710 | 0.804998 | 1.650356e-49 | -8.615850e-47 |
| Msa0942710 | Msa1030930 | 0.801506 | 8.720383e-49 | -8.615850e-47 |
| Msa0942710 | Msa1070390 | 0.813418 | 2.585687e-51 | -8.615850e-47 |
| Msa0942710 | Msa1084500 | -0.807323 | 5.346839e-50 | -8.615850e-47 |
| Msa0942710 | Msa1125790 | -0.808890 | 2.480203e-50 | -8.615850e-47 |
| Msa0942710 | Msa1131560 | 0.820725 | 5.893286e-53 | -8.615850e-47 |
| Msa0942710 | Msa1173900 | 0.826293 | 2.937106e-54 | -8.615850e-47 |
| Msa0942710 | Msa1188560 | 0.826046 | 3.363124e-54 | -8.615850e-47 |
| Msa0942710 | Msa1199290 | 0.814429 | 1.547897e-51 | -8.615850e-47 |
| Msa0942710 | Msa1201810 | 0.801067 | 1.072519e-48 | -8.615850e-47 |
| Msa0942710 | Msa1223330 | 0.807116 | 5.913602e-50 | -8.615850e-47 |
| Msa0942710 | Msa1253810 | 0.809448 | 1.882810e-50 | -8.615850e-47 |
| Msa0942710 | Msa1329450 | 0.807937 | 3.959012e-50 | -8.615850e-47 |
| Msa0942710 | Msa1333970 | 0.810991 | 8.750516e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942710 | MtrunA17_Chr6g0459301 | 93.609 | 266 | 16 | 1 | 13 | 277 | 1 | 266 | 0.0 | 508 |
| Msa0942710 | MtrunA17_Chr6g0459261 | 83.704 | 270 | 44 | 0 | 8 | 277 | 8 | 277 | 1.04e-166 | 462 |
| Msa0942710 | MtrunA17_Chr6g0459271 | 86.038 | 265 | 37 | 0 | 13 | 277 | 1 | 265 | 2.69e-159 | 443 |
| Msa0942710 | MtrunA17_Chr6g0459331 | 85.057 | 261 | 39 | 0 | 13 | 273 | 1 | 261 | 1.25e-155 | 434 |
| Msa0942710 | MtrunA17_Chr6g0459281 | 72.830 | 265 | 72 | 0 | 13 | 277 | 1 | 265 | 6.51e-143 | 402 |
| Msa0942710 | MtrunA17_Chr6g0459351 | 72.453 | 265 | 73 | 0 | 13 | 277 | 1 | 265 | 2.89e-138 | 390 |
| Msa0942710 | MtrunA17_Chr7g0270441 | 49.805 | 257 | 125 | 2 | 17 | 273 | 1 | 253 | 8.27e-82 | 247 |
| Msa0942710 | MtrunA17_Chr7g0266981 | 49.042 | 261 | 131 | 2 | 13 | 273 | 1 | 259 | 5.01e-78 | 238 |
| Msa0942710 | MtrunA17_Chr4g0044111 | 48.659 | 261 | 132 | 2 | 13 | 273 | 1 | 259 | 3.18e-77 | 235 |
| Msa0942710 | MtrunA17_Chr7g0270451 | 48.400 | 250 | 127 | 2 | 24 | 273 | 5 | 252 | 8.64e-77 | 234 |
| Msa0942710 | MtrunA17_Chr2g0324021 | 46.245 | 253 | 134 | 2 | 21 | 273 | 2 | 252 | 2.11e-76 | 233 |
| Msa0942710 | MtrunA17_Chr7g0266891 | 48.996 | 249 | 125 | 2 | 25 | 273 | 7 | 253 | 1.06e-73 | 226 |
| Msa0942710 | MtrunA17_Chr4g0026001 | 45.850 | 253 | 132 | 3 | 24 | 276 | 13 | 260 | 8.42e-70 | 216 |
| Msa0942710 | MtrunA17_Chr4g0025971 | 45.455 | 253 | 133 | 3 | 20 | 272 | 9 | 256 | 1.20e-69 | 216 |
| Msa0942710 | MtrunA17_Chr4g0025981 | 45.714 | 245 | 128 | 3 | 27 | 271 | 43 | 282 | 8.77e-68 | 213 |
| Msa0942710 | MtrunA17_Chr7g0244061 | 43.116 | 276 | 135 | 5 | 17 | 273 | 21 | 293 | 2.03e-67 | 211 |
| Msa0942710 | MtrunA17_Chr4g0040371 | 43.431 | 274 | 142 | 5 | 9 | 273 | 1 | 270 | 1.76e-63 | 201 |
| Msa0942710 | MtrunA17_Chr7g0268591 | 39.855 | 276 | 154 | 5 | 11 | 277 | 15 | 287 | 8.16e-62 | 197 |
| Msa0942710 | MtrunA17_Chr4g0044131 | 41.600 | 250 | 144 | 2 | 24 | 273 | 7 | 254 | 4.20e-61 | 194 |
| Msa0942710 | MtrunA17_Chr7g0252031 | 42.188 | 256 | 139 | 5 | 24 | 273 | 34 | 286 | 9.33e-60 | 192 |
| Msa0942710 | MtrunA17_Chr3g0084871 | 41.445 | 263 | 133 | 6 | 24 | 273 | 15 | 269 | 4.40e-54 | 176 |
| Msa0942710 | MtrunA17_Chr7g0267011 | 45.503 | 189 | 101 | 2 | 24 | 212 | 7 | 193 | 4.65e-51 | 166 |
| Msa0942710 | MtrunA17_Chr7g0267001 | 38.000 | 250 | 135 | 3 | 24 | 273 | 7 | 236 | 7.97e-49 | 162 |
| Msa0942710 | MtrunA17_Chr6g0463951 | 49.701 | 167 | 83 | 1 | 107 | 273 | 1 | 166 | 1.13e-47 | 157 |
| Msa0942710 | MtrunA17_Chr7g0266991 | 41.991 | 231 | 115 | 3 | 24 | 254 | 24 | 235 | 8.29e-46 | 154 |
| Msa0942710 | MtrunA17_Chr7g0270471 | 45.390 | 141 | 77 | 0 | 133 | 273 | 1 | 141 | 3.59e-39 | 134 |
| Msa0942710 | MtrunA17_Chr4g0044121 | 42.515 | 167 | 95 | 1 | 107 | 273 | 1 | 166 | 1.23e-35 | 125 |
| Msa0942710 | MtrunA17_Chr7g0272961 | 33.333 | 264 | 151 | 8 | 24 | 274 | 39 | 290 | 4.15e-31 | 117 |
| Msa0942710 | MtrunA17_Chr1g0191751 | 34.457 | 267 | 150 | 10 | 21 | 274 | 97 | 351 | 1.95e-30 | 117 |
| Msa0942710 | MtrunA17_Chr4g0074511 | 31.481 | 270 | 157 | 8 | 20 | 274 | 35 | 291 | 6.02e-28 | 108 |
| Msa0942710 | MtrunA17_Chr3g0122901 | 30.258 | 271 | 165 | 9 | 13 | 274 | 64 | 319 | 1.79e-27 | 108 |
| Msa0942710 | MtrunA17_Chr7g0270461 | 54.369 | 103 | 46 | 1 | 24 | 126 | 45 | 146 | 7.41e-27 | 102 |
| Msa0942710 | MtrunA17_Chr4g0075531 | 31.225 | 253 | 161 | 6 | 24 | 273 | 6 | 248 | 7.14e-26 | 102 |
| Msa0942710 | MtrunA17_Chr3g0142651 | 42.202 | 109 | 62 | 1 | 107 | 215 | 1 | 108 | 2.19e-24 | 95.5 |
| Msa0942710 | MtrunA17_Chr7g0259521 | 30.153 | 262 | 169 | 6 | 21 | 275 | 2 | 256 | 3.01e-24 | 98.2 |
| Msa0942710 | MtrunA17_Chr0c30g0494101 | 30.627 | 271 | 156 | 9 | 20 | 274 | 35 | 289 | 1.11e-23 | 97.4 |
| Msa0942710 | MtrunA17_Chr7g0259531 | 30.943 | 265 | 169 | 7 | 16 | 273 | 2 | 259 | 9.04e-22 | 91.7 |
| Msa0942710 | MtrunA17_Chr4g0028911 | 26.378 | 254 | 178 | 6 | 25 | 272 | 11 | 261 | 2.09e-18 | 82.8 |
| Msa0942710 | MtrunA17_Chr4g0028921 | 26.255 | 259 | 172 | 7 | 25 | 272 | 11 | 261 | 1.33e-17 | 80.5 |
| Msa0942710 | MtrunA17_Chr1g0182511 | 29.070 | 258 | 172 | 5 | 23 | 274 | 12 | 264 | 7.00e-17 | 78.2 |
| Msa0942710 | MtrunA17_Chr7g0239481 | 28.462 | 260 | 178 | 6 | 19 | 274 | 9 | 264 | 1.14e-16 | 77.8 |
| Msa0942710 | MtrunA17_Chr7g0239501 | 27.376 | 263 | 175 | 7 | 19 | 273 | 10 | 264 | 1.38e-15 | 74.7 |
| Msa0942710 | MtrunA17_Chr4g0032181 | 27.835 | 194 | 131 | 5 | 82 | 273 | 59 | 245 | 4.99e-15 | 73.2 |
| Msa0942710 | MtrunA17_Chr3g0112261 | 28.794 | 257 | 170 | 9 | 25 | 276 | 19 | 267 | 5.07e-15 | 73.2 |
| Msa0942710 | MtrunA17_Chr7g0239491 | 26.255 | 259 | 182 | 7 | 19 | 273 | 9 | 262 | 1.49e-14 | 71.6 |
| Msa0942710 | MtrunA17_Chr6g0459341 | 67.308 | 52 | 17 | 0 | 13 | 64 | 1 | 52 | 1.81e-14 | 68.2 |
| Msa0942710 | MtrunA17_Chr4g0045041 | 28.502 | 207 | 132 | 5 | 26 | 219 | 5 | 208 | 6.09e-14 | 71.6 |
| Msa0942710 | MtrunA17_Chr7g0239511 | 26.616 | 263 | 177 | 7 | 19 | 273 | 10 | 264 | 9.15e-14 | 69.7 |
| Msa0942710 | MtrunA17_Chr1g0171831 | 24.701 | 251 | 175 | 6 | 24 | 263 | 13 | 260 | 1.25e-13 | 69.3 |
| Msa0942710 | MtrunA17_Chr3g0112171 | 27.925 | 265 | 177 | 7 | 14 | 273 | 4 | 259 | 1.26e-13 | 69.3 |
| Msa0942710 | MtrunA17_Chr7g0239451 | 25.091 | 275 | 166 | 9 | 19 | 273 | 10 | 264 | 4.59e-13 | 67.8 |
| Msa0942710 | MtrunA17_Chr3g0112141 | 27.481 | 262 | 160 | 9 | 25 | 273 | 17 | 261 | 5.08e-13 | 67.8 |
| Msa0942710 | MtrunA17_Chr3g0112151 | 26.642 | 274 | 167 | 10 | 15 | 273 | 76 | 330 | 2.96e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0942710 | AT2G47140.1 | 48.617 | 253 | 128 | 2 | 21 | 273 | 2 | 252 | 2.68e-79 | 241 |
| Msa0942710 | AT3G29260.1 | 49.219 | 256 | 121 | 5 | 21 | 273 | 2 | 251 | 5.78e-72 | 222 |
| Msa0942710 | AT3G29250.2 | 47.036 | 253 | 132 | 2 | 21 | 273 | 2 | 252 | 3.82e-71 | 220 |
| Msa0942710 | AT3G29250.3 | 47.036 | 253 | 132 | 2 | 21 | 273 | 38 | 288 | 9.01e-71 | 220 |
| Msa0942710 | AT2G47130.1 | 47.266 | 256 | 126 | 4 | 21 | 273 | 2 | 251 | 1.15e-70 | 218 |
| Msa0942710 | AT2G47120.1 | 45.349 | 258 | 127 | 5 | 21 | 273 | 2 | 250 | 3.02e-70 | 218 |
| Msa0942710 | AT2G47120.2 | 45.098 | 255 | 126 | 5 | 24 | 273 | 6 | 251 | 3.62e-69 | 215 |
| Msa0942710 | AT3G29250.1 | 46.667 | 255 | 132 | 3 | 21 | 273 | 38 | 290 | 1.00e-68 | 215 |
| Msa0942710 | AT3G26770.1 | 44.574 | 258 | 134 | 5 | 22 | 273 | 38 | 292 | 4.02e-66 | 209 |
| Msa0942710 | AT3G26760.1 | 39.636 | 275 | 155 | 5 | 7 | 273 | 18 | 289 | 1.65e-60 | 194 |
| Msa0942710 | AT4G03140.1 | 41.176 | 255 | 142 | 4 | 24 | 273 | 77 | 328 | 2.37e-59 | 192 |
| Msa0942710 | AT3G51680.1 | 39.928 | 278 | 151 | 5 | 10 | 272 | 17 | 293 | 6.92e-57 | 185 |
| Msa0942710 | AT1G52340.1 | 42.529 | 261 | 136 | 5 | 24 | 273 | 17 | 274 | 2.32e-55 | 180 |
| Msa0942710 | AT3G42960.1 | 42.424 | 264 | 136 | 7 | 20 | 273 | 3 | 260 | 2.10e-50 | 167 |
| Msa0942710 | AT1G54870.1 | 32.824 | 262 | 159 | 8 | 22 | 274 | 79 | 332 | 2.77e-28 | 111 |
| Msa0942710 | AT1G54870.2 | 32.824 | 262 | 159 | 8 | 22 | 274 | 81 | 334 | 3.20e-28 | 110 |
| Msa0942710 | AT2G47150.1 | 33.068 | 251 | 109 | 8 | 25 | 273 | 1 | 194 | 3.34e-28 | 107 |
| Msa0942710 | AT3G05260.1 | 30.303 | 264 | 166 | 8 | 20 | 274 | 32 | 286 | 1.48e-24 | 100 |
| Msa0942710 | AT5G18210.1 | 29.885 | 261 | 164 | 7 | 25 | 274 | 8 | 260 | 4.91e-24 | 98.2 |
| Msa0942710 | AT4G05530.1 | 31.008 | 258 | 169 | 5 | 17 | 273 | 1 | 250 | 1.25e-21 | 91.7 |
| Msa0942710 | AT4G13180.1 | 29.167 | 264 | 169 | 6 | 20 | 274 | 8 | 262 | 2.01e-21 | 91.3 |
| Msa0942710 | AT3G03980.1 | 29.749 | 279 | 166 | 7 | 17 | 274 | 1 | 270 | 9.81e-21 | 89.4 |
| Msa0942710 | AT5G18210.2 | 30.000 | 260 | 150 | 8 | 25 | 273 | 8 | 246 | 1.27e-20 | 89.4 |
| Msa0942710 | AT1G24360.1 | 28.016 | 257 | 166 | 8 | 24 | 273 | 73 | 317 | 1.84e-20 | 89.4 |
| Msa0942710 | AT3G04000.1 | 28.417 | 278 | 172 | 7 | 13 | 272 | 1 | 269 | 1.56e-19 | 86.3 |
| Msa0942710 | AT1G63380.3 | 27.344 | 256 | 174 | 7 | 25 | 272 | 15 | 266 | 1.08e-18 | 84.0 |
| Msa0942710 | AT1G63380.1 | 27.344 | 256 | 174 | 7 | 25 | 272 | 17 | 268 | 1.21e-18 | 84.0 |
| Msa0942710 | AT1G63380.4 | 27.344 | 256 | 174 | 7 | 25 | 272 | 19 | 270 | 1.30e-18 | 84.0 |
| Msa0942710 | AT1G63380.2 | 27.344 | 256 | 174 | 7 | 25 | 272 | 22 | 273 | 1.63e-18 | 83.6 |
| Msa0942710 | AT2G29340.2 | 29.044 | 272 | 157 | 10 | 17 | 273 | 1 | 251 | 2.96e-18 | 82.4 |
| Msa0942710 | AT1G62610.2 | 26.953 | 256 | 175 | 7 | 25 | 272 | 13 | 264 | 3.60e-18 | 82.4 |
| Msa0942710 | AT2G29340.1 | 29.044 | 272 | 157 | 10 | 17 | 273 | 1 | 251 | 3.90e-18 | 82.8 |
| Msa0942710 | AT1G62610.1 | 26.953 | 256 | 175 | 7 | 25 | 272 | 14 | 265 | 3.91e-18 | 82.4 |
| Msa0942710 | AT1G62610.3 | 26.953 | 256 | 175 | 7 | 25 | 272 | 15 | 266 | 4.39e-18 | 82.4 |
| Msa0942710 | AT1G62610.4 | 26.953 | 256 | 175 | 7 | 25 | 272 | 19 | 270 | 5.12e-18 | 82.0 |
| Msa0942710 | AT5G06060.1 | 28.044 | 271 | 163 | 8 | 17 | 273 | 1 | 253 | 1.01e-17 | 80.9 |
| Msa0942710 | AT2G29310.1 | 29.323 | 266 | 150 | 9 | 25 | 273 | 7 | 251 | 1.28e-16 | 77.8 |
| Msa0942710 | AT3G46170.1 | 25.670 | 261 | 173 | 8 | 24 | 272 | 25 | 276 | 3.04e-16 | 77.4 |
| Msa0942710 | AT3G55290.1 | 25.769 | 260 | 172 | 7 | 25 | 272 | 18 | 268 | 3.72e-16 | 77.0 |
| Msa0942710 | AT3G55290.2 | 25.769 | 260 | 172 | 7 | 25 | 272 | 17 | 267 | 4.14e-16 | 76.6 |
| Msa0942710 | AT2G29360.1 | 29.455 | 275 | 158 | 11 | 15 | 273 | 6 | 260 | 8.19e-16 | 75.9 |
| Msa0942710 | AT1G07450.1 | 29.963 | 267 | 146 | 11 | 25 | 273 | 8 | 251 | 3.64e-15 | 73.9 |
| Msa0942710 | AT3G47350.1 | 24.354 | 271 | 180 | 8 | 3 | 257 | 22 | 283 | 3.66e-15 | 74.3 |
| Msa0942710 | AT2G29330.1 | 26.894 | 264 | 159 | 8 | 25 | 273 | 7 | 251 | 4.99e-15 | 73.6 |
| Msa0942710 | AT2G30670.1 | 25.954 | 262 | 164 | 8 | 25 | 273 | 7 | 251 | 5.76e-15 | 73.2 |
| Msa0942710 | AT2G29370.1 | 26.471 | 272 | 170 | 10 | 15 | 273 | 6 | 260 | 1.25e-14 | 72.4 |
| Msa0942710 | AT3G55310.1 | 25.573 | 262 | 170 | 8 | 25 | 272 | 17 | 267 | 1.73e-14 | 72.4 |
| Msa0942710 | AT3G47350.2 | 25.114 | 219 | 152 | 5 | 3 | 216 | 22 | 233 | 9.01e-14 | 70.5 |
| Msa0942710 | AT5G50590.2 | 29.670 | 182 | 113 | 6 | 22 | 196 | 42 | 215 | 2.84e-13 | 68.6 |
| Msa0942710 | AT5G50690.2 | 29.670 | 182 | 113 | 6 | 22 | 196 | 42 | 215 | 2.84e-13 | 68.6 |
| Msa0942710 | AT5G50590.1 | 29.670 | 182 | 113 | 6 | 22 | 196 | 42 | 215 | 4.21e-13 | 68.6 |
| Msa0942710 | AT5G50690.1 | 29.670 | 182 | 113 | 6 | 22 | 196 | 42 | 215 | 4.21e-13 | 68.6 |
| Msa0942710 | AT1G07440.1 | 25.954 | 262 | 175 | 7 | 19 | 273 | 6 | 255 | 5.33e-13 | 67.8 |
| Msa0942710 | AT2G29340.3 | 27.570 | 214 | 124 | 8 | 17 | 216 | 1 | 197 | 7.85e-13 | 66.2 |
| Msa0942710 | AT2G29340.4 | 27.570 | 214 | 124 | 8 | 17 | 216 | 1 | 197 | 7.85e-13 | 66.2 |
| Msa0942710 | AT2G29300.2 | 28.205 | 273 | 149 | 13 | 25 | 275 | 7 | 254 | 2.55e-12 | 66.2 |
| Msa0942710 | AT2G29320.1 | 27.985 | 268 | 152 | 11 | 25 | 273 | 13 | 258 | 2.81e-12 | 65.9 |
| Msa0942710 | AT2G29310.2 | 27.982 | 218 | 131 | 7 | 62 | 273 | 52 | 249 | 3.06e-12 | 65.5 |
| Msa0942710 | AT5G50770.1 | 29.648 | 199 | 131 | 6 | 14 | 208 | 33 | 226 | 3.41e-12 | 66.2 |
| Msa0942710 | AT2G29300.1 | 28.364 | 275 | 149 | 13 | 25 | 276 | 7 | 256 | 5.63e-12 | 64.7 |
| Msa0942710 | AT2G29350.2 | 28.638 | 213 | 125 | 8 | 17 | 216 | 7 | 205 | 9.92e-12 | 63.5 |
| Msa0942710 | AT5G50700.1 | 25.628 | 199 | 138 | 5 | 22 | 216 | 42 | 234 | 5.07e-11 | 62.8 |
| Msa0942710 | AT5G50600.1 | 25.628 | 199 | 138 | 5 | 22 | 216 | 42 | 234 | 5.07e-11 | 62.8 |
| Msa0942710 | AT2G29290.1 | 26.977 | 215 | 137 | 6 | 62 | 273 | 37 | 234 | 6.31e-11 | 61.6 |
| Msa0942710 | AT2G17845.1 | 24.723 | 271 | 164 | 8 | 25 | 272 | 47 | 300 | 7.45e-11 | 62.0 |
| Msa0942710 | AT2G29310.3 | 28.641 | 206 | 118 | 7 | 25 | 216 | 7 | 197 | 9.21e-11 | 60.5 |
| Msa0942710 | AT5G19200.1 | 28.079 | 203 | 130 | 6 | 19 | 214 | 29 | 222 | 9.22e-11 | 62.0 |
| Msa0942710 | AT3G47350.3 | 26.347 | 167 | 116 | 3 | 3 | 166 | 22 | 184 | 9.42e-11 | 61.2 |
Find 81 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGACTTGTAAATTATT+AGG | 0.095681 | 6_3:-18008011 | Msa0942710:CDS |
| GTCGACGGTGGATTTGTTTA+TGG | 0.161997 | 6_3:-18007846 | Msa0942710:CDS |
| CTTTGACTTGTAAATTATTA+GGG | 0.202893 | 6_3:-18008010 | Msa0942710:CDS |
| TAATCTTAGACTAGAGTTTC+TGG | 0.220802 | 6_3:+18008722 | None:intergenic |
| CAATCAACGGTTAATACTTA+TGG | 0.256946 | 6_3:-18008492 | Msa0942710:CDS |
| GTTGTGCACTGAACTATATT+TGG | 0.268144 | 6_3:-18008769 | Msa0942710:CDS |
| GACATAGCTTCTGCCATGTT+TGG | 0.290440 | 6_3:+18008744 | None:intergenic |
| ATGGTGGAGGGGCGCGTTAA+AGG | 0.305661 | 6_3:-18008200 | Msa0942710:CDS |
| ATGTCAAAGCACGCAGTATT+GGG | 0.309736 | 6_3:-18008113 | Msa0942710:CDS |
| AACTCTAGTCTAAGATTATC+AGG | 0.316109 | 6_3:-18008717 | Msa0942710:CDS |
| GAAGGCACAAGAGACTTATA+AGG | 0.323162 | 6_3:-18007976 | Msa0942710:CDS |
| GCGTGCAGCTAGCGTGCAAC+TGG | 0.355392 | 6_3:-18008084 | Msa0942710:CDS |
| ATCGGTTGGACTAAAGATTC+CGG | 0.377217 | 6_3:+18008319 | None:intergenic |
| TGGTGGAGGGGCGCGTTAAA+GGG | 0.394708 | 6_3:-18008199 | Msa0942710:CDS |
| GATGTCAAAGCACGCAGTAT+TGG | 0.423772 | 6_3:-18008114 | Msa0942710:CDS |
| CTTGAATGCCAAGTTCATCT+TGG | 0.426148 | 6_3:+18008595 | None:intergenic |
| AGTGGATGTAGGTGCACCTT+TGG | 0.435399 | 6_3:+18008553 | None:intergenic |
| GAACATTGATTGTGAATAAA+CGG | 0.441133 | 6_3:+18008261 | None:intergenic |
| TGGACTAAAGATTCCGGCAT+TGG | 0.443211 | 6_3:+18008325 | None:intergenic |
| AAGGGATATGCAAGACTTGA+AGG | 0.452803 | 6_3:-18007957 | Msa0942710:CDS |
| CGCGCCCCTCCACCATTGCA+CGG | 0.458916 | 6_3:+18008207 | None:intergenic |
| TGCGGCCCGTGCAATGGTGG+AGG | 0.461947 | 6_3:-18008213 | Msa0942710:CDS |
| TCCAACACAGTTTGATCGGT+TGG | 0.467057 | 6_3:+18008305 | None:intergenic |
| ACAGCATCTGCCACATGCTT+AGG | 0.471667 | 6_3:+18007921 | None:intergenic |
| TTATTCACAATCAATGTTCG+AGG | 0.474144 | 6_3:-18008257 | Msa0942710:CDS |
| TGTGAATAAACGGTCTAGTT+GGG | 0.476577 | 6_3:+18008271 | None:intergenic |
| GATATAATGTTCACCAATGC+CGG | 0.479834 | 6_3:-18008338 | Msa0942710:CDS |
| TTGTGAATAAACGGTCTAGT+TGG | 0.482190 | 6_3:+18008270 | None:intergenic |
| GTGTGCACGGGGAGTGTTCA+CGG | 0.484890 | 6_3:-18008170 | Msa0942710:CDS |
| GCGGCCCGTGCAATGGTGGA+GGG | 0.499597 | 6_3:-18008212 | Msa0942710:CDS |
| ACTAGCACCACCCGTGATGA+TGG | 0.502192 | 6_3:+18008686 | None:intergenic |
| CACAATCAATGTTCGAGGAA+TGG | 0.504145 | 6_3:-18008252 | Msa0942710:CDS |
| AAAGGTGTCGCAAGTCCATT+CGG | 0.507428 | 6_3:+18008029 | None:intergenic |
| TCGTGTAATCCGTTGACCTC+AGG | 0.511332 | 6_3:+18008135 | None:intergenic |
| ACGGGTGGTGCTAGTGGCAT+CGG | 0.517674 | 6_3:-18008678 | Msa0942710:CDS |
| GGCAAAATAGCCATCATCAC+GGG | 0.526330 | 6_3:-18008696 | Msa0942710:CDS |
| CACCGTCGACACTAAGATCA+AGG | 0.530151 | 6_3:+18007859 | None:intergenic |
| AATGATGCTGAGTTTGTCAC+TGG | 0.531303 | 6_3:-18007882 | Msa0942710:CDS |
| AACGGTTAATACTTATGGAC+AGG | 0.532873 | 6_3:-18008487 | Msa0942710:intron |
| AAAGGGAGTATTGTGTGCAC+GGG | 0.534406 | 6_3:-18008182 | Msa0942710:CDS |
| CCTAATAATTTACAAGTCAA+AGG | 0.536133 | 6_3:+18008011 | None:intergenic |
| GCGCCCCTCCACCATTGCAC+GGG | 0.540592 | 6_3:+18008208 | None:intergenic |
| GAGTTCCAACACAGTTTGAT+CGG | 0.542405 | 6_3:+18008301 | None:intergenic |
| GTGAACTGTGTTTCGCCGAA+TGG | 0.545436 | 6_3:-18008044 | Msa0942710:CDS |
| GGGAGTGTTCACGGTAGTCA+TGG | 0.546162 | 6_3:-18008161 | Msa0942710:CDS |
| GCTGACATCCAAGATGAACT+TGG | 0.551641 | 6_3:-18008603 | Msa0942710:CDS |
| ATCATCACGGGTGGTGCTAG+TGG | 0.552992 | 6_3:-18008684 | Msa0942710:CDS |
| GGCCTTGATCTTAGTGTCGA+CGG | 0.553227 | 6_3:-18007861 | Msa0942710:CDS |
| AAGGCACAAGAGACTTATAA+GGG | 0.554682 | 6_3:-18007975 | Msa0942710:CDS |
| TAAATTATTAGGGGTGAGTG+AGG | 0.559442 | 6_3:-18008000 | Msa0942710:CDS |
| TAAAGGGAGTATTGTGTGCA+CGG | 0.563172 | 6_3:-18008183 | Msa0942710:CDS |
| ACATGCGGCCCGTGCAATGG+TGG | 0.566834 | 6_3:-18008216 | Msa0942710:CDS |
| TAGTGGCATCGGTGAAGCCA+CGG | 0.583141 | 6_3:-18008667 | Msa0942710:CDS |
| ATTAGGGGTGAGTGAGGAGA+AGG | 0.584409 | 6_3:-18007994 | Msa0942710:CDS |
| CGGCCCGTGCAATGGTGGAG+GGG | 0.588308 | 6_3:-18008211 | Msa0942710:CDS |
| TCCAACCGATCAAACTGTGT+TGG | 0.590298 | 6_3:-18008306 | Msa0942710:CDS |
| GAAACATGCGGCCCGTGCAA+TGG | 0.591668 | 6_3:-18008219 | Msa0942710:CDS |
| ATTCAAGTAGCTGCGTCCAT+CGG | 0.592404 | 6_3:-18008579 | Msa0942710:CDS |
| GGTGCACCTTTGGTTGCCGA+TGG | 0.593029 | 6_3:+18008563 | None:intergenic |
| AGCGTGCAACTGGCCACACA+CGG | 0.593248 | 6_3:-18008074 | Msa0942710:CDS |
| TGTCAAAGCACGCAGTATTG+GGG | 0.601212 | 6_3:-18008112 | Msa0942710:CDS |
| CTGCGTCCATCGGCAACCAA+AGG | 0.606542 | 6_3:-18008569 | Msa0942710:CDS |
| GTCTTTGCTAACGAAGGCGT+CGG | 0.609819 | 6_3:-18008639 | Msa0942710:CDS |
| GTTCACTCTTATTCCGTGTG+TGG | 0.610827 | 6_3:+18008061 | None:intergenic |
| TTTGACTTGTAAATTATTAG+GGG | 0.611360 | 6_3:-18008009 | Msa0942710:CDS |
| TCATGGATTCCTGAGGTCAA+CGG | 0.620188 | 6_3:-18008144 | Msa0942710:CDS |
| ACTATATTTGGATCCAAACA+TGG | 0.632226 | 6_3:-18008757 | Msa0942710:CDS |
| AGGCAAAATAGCCATCATCA+CGG | 0.640770 | 6_3:-18008697 | Msa0942710:CDS |
| GGATGTCAGCAATCACAACA+TGG | 0.642460 | 6_3:+18008616 | None:intergenic |
| TGCCACATCACAGTGGATGT+AGG | 0.644985 | 6_3:+18008542 | None:intergenic |
| CACCTACATCCACTGTGATG+TGG | 0.646592 | 6_3:-18008544 | Msa0942710:CDS |
| GCGTGTGTCTTTGCTAACGA+AGG | 0.650691 | 6_3:-18008645 | Msa0942710:CDS |
| ATATGCAAGACTTGAAGGAG+TGG | 0.664008 | 6_3:-18007952 | Msa0942710:CDS |
| CTTGATCTTAGTGTCGACGG+TGG | 0.664645 | 6_3:-18007858 | Msa0942710:CDS |
| GGTGCTCACACCTAAGCATG+TGG | 0.673012 | 6_3:-18007931 | Msa0942710:CDS |
| AAAATAGCCATCATCACGGG+TGG | 0.677019 | 6_3:-18008693 | Msa0942710:CDS |
| ACGGTAGTCATGGATTCCTG+AGG | 0.689351 | 6_3:-18008151 | Msa0942710:CDS |
| GGCATTGTGTGTGAAACATG+CGG | 0.701610 | 6_3:-18008231 | Msa0942710:CDS |
| CTTCGTCTGCCACATCACAG+TGG | 0.713218 | 6_3:+18008535 | None:intergenic |
| AAGGGAGTATTGTGTGCACG+GGG | 0.724305 | 6_3:-18008181 | Msa0942710:CDS |
| GTTAGCAAAGACACACGCCG+TGG | 0.746670 | 6_3:+18008650 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTGACTTGTAAATTATTA+GGG | - | chr6_3:18008563-18008582 | Msa0942710:CDS | 20.0% |
| !!! | TTTGACTTGTAAATTATTAG+GGG | - | chr6_3:18008564-18008583 | Msa0942710:CDS | 20.0% |
| !!! | CTTTGACTTGTAAATTATTA+GGG | - | chr6_3:18008563-18008582 | Msa0942710:CDS | 20.0% |
| !!! | TTTGACTTGTAAATTATTAG+GGG | - | chr6_3:18008564-18008583 | Msa0942710:CDS | 20.0% |
| ! | CAAAAATTTCGTTCAATCAA+CGG | - | chr6_3:18008068-18008087 | Msa0942710:CDS | 25.0% |
| !! | GAACATTGATTGTGAATAAA+CGG | + | chr6_3:18008315-18008334 | None:intergenic | 25.0% |
| ! | CCTAATAATTTACAAGTCAA+AGG | + | chr6_3:18008565-18008584 | None:intergenic | 25.0% |
| !!! | CCTTTGACTTGTAAATTATT+AGG | - | chr6_3:18008562-18008581 | Msa0942710:CDS | 25.0% |
| ! | CAAAAATTTCGTTCAATCAA+CGG | - | chr6_3:18008068-18008087 | Msa0942710:CDS | 25.0% |
| !! | GAACATTGATTGTGAATAAA+CGG | + | chr6_3:18008315-18008334 | None:intergenic | 25.0% |
| ! | CCTAATAATTTACAAGTCAA+AGG | + | chr6_3:18008565-18008584 | None:intergenic | 25.0% |
| !!! | CCTTTGACTTGTAAATTATT+AGG | - | chr6_3:18008562-18008581 | Msa0942710:CDS | 25.0% |
| ACTATATTTGGATCCAAACA+TGG | - | chr6_3:18007816-18007835 | Msa0942710:three_prime_UTR | 30.0% | |
| TAATCTTAGACTAGAGTTTC+TGG | + | chr6_3:18007854-18007873 | None:intergenic | 30.0% | |
| ! | AACTCTAGTCTAAGATTATC+AGG | - | chr6_3:18007856-18007875 | Msa0942710:CDS | 30.0% |
| CAATCAACGGTTAATACTTA+TGG | - | chr6_3:18008081-18008100 | Msa0942710:CDS | 30.0% | |
| ! | ATTTCCTATCTTAGCTTTCA+AGG | - | chr6_3:18008116-18008135 | Msa0942710:CDS | 30.0% |
| ! | TTTCCTATCTTAGCTTTCAA+GGG | - | chr6_3:18008117-18008136 | Msa0942710:CDS | 30.0% |
| TTATTCACAATCAATGTTCG+AGG | - | chr6_3:18008316-18008335 | Msa0942710:CDS | 30.0% | |
| TGCAACAAAAAAAAACACGA+AGG | - | chr6_3:18008764-18008783 | Msa0942710:CDS | 30.0% | |
| ACTATATTTGGATCCAAACA+TGG | - | chr6_3:18007816-18007835 | Msa0942710:three_prime_UTR | 30.0% | |
| TAATCTTAGACTAGAGTTTC+TGG | + | chr6_3:18007854-18007873 | None:intergenic | 30.0% | |
| ! | AACTCTAGTCTAAGATTATC+AGG | - | chr6_3:18007856-18007875 | Msa0942710:CDS | 30.0% |
| CAATCAACGGTTAATACTTA+TGG | - | chr6_3:18008081-18008100 | Msa0942710:CDS | 30.0% | |
| ! | ATTTCCTATCTTAGCTTTCA+AGG | - | chr6_3:18008116-18008135 | Msa0942710:CDS | 30.0% |
| ! | TTTCCTATCTTAGCTTTCAA+GGG | - | chr6_3:18008117-18008136 | Msa0942710:CDS | 30.0% |
| TTATTCACAATCAATGTTCG+AGG | - | chr6_3:18008316-18008335 | Msa0942710:CDS | 30.0% | |
| TGCAACAAAAAAAAACACGA+AGG | - | chr6_3:18008764-18008783 | Msa0942710:CDS | 30.0% | |
| GTTGTGCACTGAACTATATT+TGG | - | chr6_3:18007804-18007823 | Msa0942710:three_prime_UTR | 35.0% | |
| AACGGTTAATACTTATGGAC+AGG | - | chr6_3:18008086-18008105 | Msa0942710:CDS | 35.0% | |
| GATTATGTTATTCTCACACC+AGG | - | chr6_3:18008210-18008229 | Msa0942710:CDS | 35.0% | |
| TGGTGAACATTATATCTACC+TGG | + | chr6_3:18008231-18008250 | None:intergenic | 35.0% | |
| GATATAATGTTCACCAATGC+CGG | - | chr6_3:18008235-18008254 | Msa0942710:CDS | 35.0% | |
| TGTGAATAAACGGTCTAGTT+GGG | + | chr6_3:18008305-18008324 | None:intergenic | 35.0% | |
| TTGTGAATAAACGGTCTAGT+TGG | + | chr6_3:18008306-18008325 | None:intergenic | 35.0% | |
| TAAATTATTAGGGGTGAGTG+AGG | - | chr6_3:18008573-18008592 | Msa0942710:CDS | 35.0% | |
| AAGGCACAAGAGACTTATAA+GGG | - | chr6_3:18008598-18008617 | Msa0942710:CDS | 35.0% | |
| GTTGTGCACTGAACTATATT+TGG | - | chr6_3:18007804-18007823 | Msa0942710:three_prime_UTR | 35.0% | |
| AACGGTTAATACTTATGGAC+AGG | - | chr6_3:18008086-18008105 | Msa0942710:CDS | 35.0% | |
| GATTATGTTATTCTCACACC+AGG | - | chr6_3:18008210-18008229 | Msa0942710:CDS | 35.0% | |
| TGGTGAACATTATATCTACC+TGG | + | chr6_3:18008231-18008250 | None:intergenic | 35.0% | |
| GATATAATGTTCACCAATGC+CGG | - | chr6_3:18008235-18008254 | Msa0942710:CDS | 35.0% | |
| TGTGAATAAACGGTCTAGTT+GGG | + | chr6_3:18008305-18008324 | None:intergenic | 35.0% | |
| TTGTGAATAAACGGTCTAGT+TGG | + | chr6_3:18008306-18008325 | None:intergenic | 35.0% | |
| TAAATTATTAGGGGTGAGTG+AGG | - | chr6_3:18008573-18008592 | Msa0942710:CDS | 35.0% | |
| AAGGCACAAGAGACTTATAA+GGG | - | chr6_3:18008598-18008617 | Msa0942710:CDS | 35.0% | |
| AGGCAAAATAGCCATCATCA+CGG | - | chr6_3:18007876-18007895 | Msa0942710:CDS | 40.0% | |
| CTTGAATGCCAAGTTCATCT+TGG | + | chr6_3:18007981-18008000 | None:intergenic | 40.0% | |
| ACACCCTTGAAAGCTAAGAT+AGG | + | chr6_3:18008123-18008142 | None:intergenic | 40.0% | |
| ATCGGTTGGACTAAAGATTC+CGG | + | chr6_3:18008257-18008276 | None:intergenic | 40.0% | |
| GAGTTCCAACACAGTTTGAT+CGG | + | chr6_3:18008275-18008294 | None:intergenic | 40.0% | |
| CACAATCAATGTTCGAGGAA+TGG | - | chr6_3:18008321-18008340 | Msa0942710:CDS | 40.0% | |
| !! | TAAAGGGAGTATTGTGTGCA+CGG | - | chr6_3:18008390-18008409 | Msa0942710:intron | 40.0% |
| ATGTCAAAGCACGCAGTATT+GGG | - | chr6_3:18008460-18008479 | Msa0942710:intron | 40.0% | |
| ! | GAAGGCACAAGAGACTTATA+AGG | - | chr6_3:18008597-18008616 | Msa0942710:CDS | 40.0% |
| AAGGGATATGCAAGACTTGA+AGG | - | chr6_3:18008616-18008635 | Msa0942710:CDS | 40.0% | |
| ATATGCAAGACTTGAAGGAG+TGG | - | chr6_3:18008621-18008640 | Msa0942710:CDS | 40.0% | |
| AATGATGCTGAGTTTGTCAC+TGG | - | chr6_3:18008691-18008710 | Msa0942710:CDS | 40.0% | |
| AGGCAAAATAGCCATCATCA+CGG | - | chr6_3:18007876-18007895 | Msa0942710:CDS | 40.0% | |
| CTTGAATGCCAAGTTCATCT+TGG | + | chr6_3:18007981-18008000 | None:intergenic | 40.0% | |
| ACACCCTTGAAAGCTAAGAT+AGG | + | chr6_3:18008123-18008142 | None:intergenic | 40.0% | |
| ATCGGTTGGACTAAAGATTC+CGG | + | chr6_3:18008257-18008276 | None:intergenic | 40.0% | |
| GAGTTCCAACACAGTTTGAT+CGG | + | chr6_3:18008275-18008294 | None:intergenic | 40.0% | |
| CACAATCAATGTTCGAGGAA+TGG | - | chr6_3:18008321-18008340 | Msa0942710:CDS | 40.0% | |
| !! | TAAAGGGAGTATTGTGTGCA+CGG | - | chr6_3:18008390-18008409 | Msa0942710:intron | 40.0% |
| ATGTCAAAGCACGCAGTATT+GGG | - | chr6_3:18008460-18008479 | Msa0942710:intron | 40.0% | |
| ! | GAAGGCACAAGAGACTTATA+AGG | - | chr6_3:18008597-18008616 | Msa0942710:CDS | 40.0% |
| AAGGGATATGCAAGACTTGA+AGG | - | chr6_3:18008616-18008635 | Msa0942710:CDS | 40.0% | |
| ATATGCAAGACTTGAAGGAG+TGG | - | chr6_3:18008621-18008640 | Msa0942710:CDS | 40.0% | |
| AATGATGCTGAGTTTGTCAC+TGG | - | chr6_3:18008691-18008710 | Msa0942710:CDS | 40.0% | |
| GACATAGCTTCTGCCATGTT+TGG | + | chr6_3:18007832-18007851 | None:intergenic | 45.0% | |
| GGCAAAATAGCCATCATCAC+GGG | - | chr6_3:18007877-18007896 | Msa0942710:CDS | 45.0% | |
| AAAATAGCCATCATCACGGG+TGG | - | chr6_3:18007880-18007899 | Msa0942710:CDS | 45.0% | |
| GGATGTCAGCAATCACAACA+TGG | + | chr6_3:18007960-18007979 | None:intergenic | 45.0% | |
| GCTGACATCCAAGATGAACT+TGG | - | chr6_3:18007970-18007989 | Msa0942710:CDS | 45.0% | |
| ATTCAAGTAGCTGCGTCCAT+CGG | - | chr6_3:18007994-18008013 | Msa0942710:CDS | 45.0% | |
| TGGACTAAAGATTCCGGCAT+TGG | + | chr6_3:18008251-18008270 | None:intergenic | 45.0% | |
| TCCAACCGATCAAACTGTGT+TGG | - | chr6_3:18008267-18008286 | Msa0942710:CDS | 45.0% | |
| TCCAACACAGTTTGATCGGT+TGG | + | chr6_3:18008271-18008290 | None:intergenic | 45.0% | |
| GGCATTGTGTGTGAAACATG+CGG | - | chr6_3:18008342-18008361 | Msa0942710:CDS | 45.0% | |
| !! | AAAGGGAGTATTGTGTGCAC+GGG | - | chr6_3:18008391-18008410 | Msa0942710:intron | 45.0% |
| TCATGGATTCCTGAGGTCAA+CGG | - | chr6_3:18008429-18008448 | Msa0942710:intron | 45.0% | |
| GATGTCAAAGCACGCAGTAT+TGG | - | chr6_3:18008459-18008478 | Msa0942710:intron | 45.0% | |
| TGTCAAAGCACGCAGTATTG+GGG | - | chr6_3:18008461-18008480 | Msa0942710:intron | 45.0% | |
| GTTCACTCTTATTCCGTGTG+TGG | + | chr6_3:18008515-18008534 | None:intergenic | 45.0% | |
| !! | AAAGGTGTCGCAAGTCCATT+CGG | + | chr6_3:18008547-18008566 | None:intergenic | 45.0% |
| ! | GTCGACGGTGGATTTGTTTA+TGG | - | chr6_3:18008727-18008746 | Msa0942710:CDS | 45.0% |
| GACATAGCTTCTGCCATGTT+TGG | + | chr6_3:18007832-18007851 | None:intergenic | 45.0% | |
| GGCAAAATAGCCATCATCAC+GGG | - | chr6_3:18007877-18007896 | Msa0942710:CDS | 45.0% | |
| AAAATAGCCATCATCACGGG+TGG | - | chr6_3:18007880-18007899 | Msa0942710:CDS | 45.0% | |
| GGATGTCAGCAATCACAACA+TGG | + | chr6_3:18007960-18007979 | None:intergenic | 45.0% | |
| GCTGACATCCAAGATGAACT+TGG | - | chr6_3:18007970-18007989 | Msa0942710:CDS | 45.0% | |
| ATTCAAGTAGCTGCGTCCAT+CGG | - | chr6_3:18007994-18008013 | Msa0942710:CDS | 45.0% | |
| TGGACTAAAGATTCCGGCAT+TGG | + | chr6_3:18008251-18008270 | None:intergenic | 45.0% | |
| TCCAACCGATCAAACTGTGT+TGG | - | chr6_3:18008267-18008286 | Msa0942710:CDS | 45.0% | |
| TCCAACACAGTTTGATCGGT+TGG | + | chr6_3:18008271-18008290 | None:intergenic | 45.0% | |
| GGCATTGTGTGTGAAACATG+CGG | - | chr6_3:18008342-18008361 | Msa0942710:CDS | 45.0% | |
| !! | AAAGGGAGTATTGTGTGCAC+GGG | - | chr6_3:18008391-18008410 | Msa0942710:intron | 45.0% |
| TCATGGATTCCTGAGGTCAA+CGG | - | chr6_3:18008429-18008448 | Msa0942710:intron | 45.0% | |
| GATGTCAAAGCACGCAGTAT+TGG | - | chr6_3:18008459-18008478 | Msa0942710:intron | 45.0% | |
| TGTCAAAGCACGCAGTATTG+GGG | - | chr6_3:18008461-18008480 | Msa0942710:intron | 45.0% | |
| GTTCACTCTTATTCCGTGTG+TGG | + | chr6_3:18008515-18008534 | None:intergenic | 45.0% | |
| !! | AAAGGTGTCGCAAGTCCATT+CGG | + | chr6_3:18008547-18008566 | None:intergenic | 45.0% |
| ! | GTCGACGGTGGATTTGTTTA+TGG | - | chr6_3:18008727-18008746 | Msa0942710:CDS | 45.0% |
| GCGTGTGTCTTTGCTAACGA+AGG | - | chr6_3:18007928-18007947 | Msa0942710:CDS | 50.0% | |
| ! | GTCTTTGCTAACGAAGGCGT+CGG | - | chr6_3:18007934-18007953 | Msa0942710:CDS | 50.0% |
| AGTGGATGTAGGTGCACCTT+TGG | + | chr6_3:18008023-18008042 | None:intergenic | 50.0% | |
| CACCTACATCCACTGTGATG+TGG | - | chr6_3:18008029-18008048 | Msa0942710:CDS | 50.0% | |
| TGCCACATCACAGTGGATGT+AGG | + | chr6_3:18008034-18008053 | None:intergenic | 50.0% | |
| !! | AAGGGAGTATTGTGTGCACG+GGG | - | chr6_3:18008392-18008411 | Msa0942710:intron | 50.0% |
| ACGGTAGTCATGGATTCCTG+AGG | - | chr6_3:18008422-18008441 | Msa0942710:intron | 50.0% | |
| TCGTGTAATCCGTTGACCTC+AGG | + | chr6_3:18008441-18008460 | None:intergenic | 50.0% | |
| GTGAACTGTGTTTCGCCGAA+TGG | - | chr6_3:18008529-18008548 | Msa0942710:CDS | 50.0% | |
| ATTAGGGGTGAGTGAGGAGA+AGG | - | chr6_3:18008579-18008598 | Msa0942710:CDS | 50.0% | |
| ACAGCATCTGCCACATGCTT+AGG | + | chr6_3:18008655-18008674 | None:intergenic | 50.0% | |
| ! | GGCCTTGATCTTAGTGTCGA+CGG | - | chr6_3:18008712-18008731 | Msa0942710:CDS | 50.0% |
| CACCGTCGACACTAAGATCA+AGG | + | chr6_3:18008717-18008736 | None:intergenic | 50.0% | |
| !! | CTTGATCTTAGTGTCGACGG+TGG | - | chr6_3:18008715-18008734 | Msa0942710:CDS | 50.0% |
| GCGTGTGTCTTTGCTAACGA+AGG | - | chr6_3:18007928-18007947 | Msa0942710:CDS | 50.0% | |
| ! | GTCTTTGCTAACGAAGGCGT+CGG | - | chr6_3:18007934-18007953 | Msa0942710:CDS | 50.0% |
| AGTGGATGTAGGTGCACCTT+TGG | + | chr6_3:18008023-18008042 | None:intergenic | 50.0% | |
| CACCTACATCCACTGTGATG+TGG | - | chr6_3:18008029-18008048 | Msa0942710:CDS | 50.0% | |
| TGCCACATCACAGTGGATGT+AGG | + | chr6_3:18008034-18008053 | None:intergenic | 50.0% | |
| !! | AAGGGAGTATTGTGTGCACG+GGG | - | chr6_3:18008392-18008411 | Msa0942710:intron | 50.0% |
| ACGGTAGTCATGGATTCCTG+AGG | - | chr6_3:18008422-18008441 | Msa0942710:intron | 50.0% | |
| TCGTGTAATCCGTTGACCTC+AGG | + | chr6_3:18008441-18008460 | None:intergenic | 50.0% | |
| GTGAACTGTGTTTCGCCGAA+TGG | - | chr6_3:18008529-18008548 | Msa0942710:CDS | 50.0% | |
| ATTAGGGGTGAGTGAGGAGA+AGG | - | chr6_3:18008579-18008598 | Msa0942710:CDS | 50.0% | |
| ACAGCATCTGCCACATGCTT+AGG | + | chr6_3:18008655-18008674 | None:intergenic | 50.0% | |
| ! | GGCCTTGATCTTAGTGTCGA+CGG | - | chr6_3:18008712-18008731 | Msa0942710:CDS | 50.0% |
| CACCGTCGACACTAAGATCA+AGG | + | chr6_3:18008717-18008736 | None:intergenic | 50.0% | |
| !! | CTTGATCTTAGTGTCGACGG+TGG | - | chr6_3:18008715-18008734 | Msa0942710:CDS | 50.0% |
| ACTAGCACCACCCGTGATGA+TGG | + | chr6_3:18007890-18007909 | None:intergenic | 55.0% | |
| ! | ATCATCACGGGTGGTGCTAG+TGG | - | chr6_3:18007889-18007908 | Msa0942710:CDS | 55.0% |
| !! | TAGTGGCATCGGTGAAGCCA+CGG | - | chr6_3:18007906-18007925 | Msa0942710:CDS | 55.0% |
| GTTAGCAAAGACACACGCCG+TGG | + | chr6_3:18007926-18007945 | None:intergenic | 55.0% | |
| CTTCGTCTGCCACATCACAG+TGG | + | chr6_3:18008041-18008060 | None:intergenic | 55.0% | |
| !! | GGGAGTGTTCACGGTAGTCA+TGG | - | chr6_3:18008412-18008431 | Msa0942710:intron | 55.0% |
| GGTGCTCACACCTAAGCATG+TGG | - | chr6_3:18008642-18008661 | Msa0942710:CDS | 55.0% | |
| ACTAGCACCACCCGTGATGA+TGG | + | chr6_3:18007890-18007909 | None:intergenic | 55.0% | |
| ! | ATCATCACGGGTGGTGCTAG+TGG | - | chr6_3:18007889-18007908 | Msa0942710:CDS | 55.0% |
| !! | TAGTGGCATCGGTGAAGCCA+CGG | - | chr6_3:18007906-18007925 | Msa0942710:CDS | 55.0% |
| GTTAGCAAAGACACACGCCG+TGG | + | chr6_3:18007926-18007945 | None:intergenic | 55.0% | |
| CTTCGTCTGCCACATCACAG+TGG | + | chr6_3:18008041-18008060 | None:intergenic | 55.0% | |
| !! | GGGAGTGTTCACGGTAGTCA+TGG | - | chr6_3:18008412-18008431 | Msa0942710:intron | 55.0% |
| GGTGCTCACACCTAAGCATG+TGG | - | chr6_3:18008642-18008661 | Msa0942710:CDS | 55.0% | |
| ! | ACGGGTGGTGCTAGTGGCAT+CGG | - | chr6_3:18007895-18007914 | Msa0942710:CDS | 60.0% |
| CTGCGTCCATCGGCAACCAA+AGG | - | chr6_3:18008004-18008023 | Msa0942710:CDS | 60.0% | |
| GGTGCACCTTTGGTTGCCGA+TGG | + | chr6_3:18008013-18008032 | None:intergenic | 60.0% | |
| GAAACATGCGGCCCGTGCAA+TGG | - | chr6_3:18008354-18008373 | Msa0942710:intron | 60.0% | |
| ! | ATGGTGGAGGGGCGCGTTAA+AGG | - | chr6_3:18008373-18008392 | Msa0942710:intron | 60.0% |
| ! | TGGTGGAGGGGCGCGTTAAA+GGG | - | chr6_3:18008374-18008393 | Msa0942710:intron | 60.0% |
| !! | GTGTGCACGGGGAGTGTTCA+CGG | - | chr6_3:18008403-18008422 | Msa0942710:intron | 60.0% |
| AGCGTGCAACTGGCCACACA+CGG | - | chr6_3:18008499-18008518 | Msa0942710:CDS | 60.0% | |
| ! | ACGGGTGGTGCTAGTGGCAT+CGG | - | chr6_3:18007895-18007914 | Msa0942710:CDS | 60.0% |
| CTGCGTCCATCGGCAACCAA+AGG | - | chr6_3:18008004-18008023 | Msa0942710:CDS | 60.0% | |
| GGTGCACCTTTGGTTGCCGA+TGG | + | chr6_3:18008013-18008032 | None:intergenic | 60.0% | |
| GAAACATGCGGCCCGTGCAA+TGG | - | chr6_3:18008354-18008373 | Msa0942710:intron | 60.0% | |
| ! | ATGGTGGAGGGGCGCGTTAA+AGG | - | chr6_3:18008373-18008392 | Msa0942710:intron | 60.0% |
| ! | TGGTGGAGGGGCGCGTTAAA+GGG | - | chr6_3:18008374-18008393 | Msa0942710:intron | 60.0% |
| !! | GTGTGCACGGGGAGTGTTCA+CGG | - | chr6_3:18008403-18008422 | Msa0942710:intron | 60.0% |
| AGCGTGCAACTGGCCACACA+CGG | - | chr6_3:18008499-18008518 | Msa0942710:CDS | 60.0% | |
| ACATGCGGCCCGTGCAATGG+TGG | - | chr6_3:18008357-18008376 | Msa0942710:intron | 65.0% | |
| GCGTGCAGCTAGCGTGCAAC+TGG | - | chr6_3:18008489-18008508 | Msa0942710:CDS | 65.0% | |
| ACATGCGGCCCGTGCAATGG+TGG | - | chr6_3:18008357-18008376 | Msa0942710:intron | 65.0% | |
| GCGTGCAGCTAGCGTGCAAC+TGG | - | chr6_3:18008489-18008508 | Msa0942710:CDS | 65.0% | |
| TGCGGCCCGTGCAATGGTGG+AGG | - | chr6_3:18008360-18008379 | Msa0942710:intron | 70.0% | |
| ! | GCGGCCCGTGCAATGGTGGA+GGG | - | chr6_3:18008361-18008380 | Msa0942710:intron | 70.0% |
| ! | CGGCCCGTGCAATGGTGGAG+GGG | - | chr6_3:18008362-18008381 | Msa0942710:intron | 70.0% |
| GCGCCCCTCCACCATTGCAC+GGG | + | chr6_3:18008368-18008387 | None:intergenic | 70.0% | |
| CGCGCCCCTCCACCATTGCA+CGG | + | chr6_3:18008369-18008388 | None:intergenic | 70.0% | |
| TGCGGCCCGTGCAATGGTGG+AGG | - | chr6_3:18008360-18008379 | Msa0942710:intron | 70.0% | |
| ! | GCGGCCCGTGCAATGGTGGA+GGG | - | chr6_3:18008361-18008380 | Msa0942710:intron | 70.0% |
| ! | CGGCCCGTGCAATGGTGGAG+GGG | - | chr6_3:18008362-18008381 | Msa0942710:intron | 70.0% |
| GCGCCCCTCCACCATTGCAC+GGG | + | chr6_3:18008368-18008387 | None:intergenic | 70.0% | |
| CGCGCCCCTCCACCATTGCA+CGG | + | chr6_3:18008369-18008388 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 18007799 | 18008796 | 18007799 | ID=Msa0942710;Name=Msa0942710 |
| chr6_3 | mRNA | 18007799 | 18008796 | 18007799 | ID=Msa0942710-mRNA-1;Parent=Msa0942710;Name=Msa0942710-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|1|1|1|1|2|40|277 |
| chr6_3 | exon | 18007799 | 18008363 | 18007799 | ID=Msa0942710-mRNA-1:exon:5386;Parent=Msa0942710-mRNA-1 |
| chr6_3 | exon | 18008488 | 18008796 | 18008488 | ID=Msa0942710-mRNA-1:exon:5385;Parent=Msa0942710-mRNA-1 |
| chr6_3 | CDS | 18008488 | 18008796 | 18008488 | ID=Msa0942710-mRNA-1:cds;Parent=Msa0942710-mRNA-1 |
| chr6_3 | CDS | 18007839 | 18008363 | 18007839 | ID=Msa0942710-mRNA-1:cds;Parent=Msa0942710-mRNA-1 |
| chr6_3 | three_prime_UTR | 18007799 | 18007838 | 18007799 | ID=Msa0942710-mRNA-1:three_prime_utr;Parent=Msa0942710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
