Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0984220 | XP_003602545.2 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 783 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0984220 | sp|P53492|ACT7_ARATH | 98.408 | 377 | 6 | 0 | 1 | 377 | 1 | 377 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0984220 | H6W451 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 783 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0984220 | -0.803348 | 3.638232e-49 | -8.615850e-47 |
| Msa0030150 | Msa0984220 | 0.814690 | 1.355095e-51 | -8.615850e-47 |
| Msa0076320 | Msa0984220 | -0.803826 | 2.895631e-49 | -8.615850e-47 |
| Msa0079070 | Msa0984220 | -0.804138 | 2.494302e-49 | -8.615850e-47 |
| Msa0083280 | Msa0984220 | -0.803202 | 3.900670e-49 | -8.615850e-47 |
| Msa0608710 | Msa0984220 | -0.819089 | 1.394603e-52 | -8.615850e-47 |
| Msa0797970 | Msa0984220 | -0.815613 | 8.451504e-52 | -8.615850e-47 |
| Msa0799370 | Msa0984220 | -0.802847 | 4.619225e-49 | -8.615850e-47 |
| Msa0802010 | Msa0984220 | -0.847657 | 1.006477e-59 | -8.615850e-47 |
| Msa0807030 | Msa0984220 | -0.804910 | 1.721537e-49 | -8.615850e-47 |
| Msa0827350 | Msa0984220 | 0.824665 | 7.138098e-54 | -8.615850e-47 |
| Msa0840380 | Msa0984220 | -0.810900 | 9.157873e-51 | -8.615850e-47 |
| Msa0125640 | Msa0984220 | 0.828103 | 1.082758e-54 | -8.615850e-47 |
| Msa0137710 | Msa0984220 | 0.802591 | 5.215975e-49 | -8.615850e-47 |
| Msa0137730 | Msa0984220 | -0.833050 | 6.661615e-56 | -8.615850e-47 |
| Msa0170110 | Msa0984220 | 0.825361 | 4.887914e-54 | -8.615850e-47 |
| Msa0383800 | Msa0984220 | -0.814920 | 1.204697e-51 | -8.615850e-47 |
| Msa0389610 | Msa0984220 | 0.813464 | 2.525659e-51 | -8.615850e-47 |
| Msa0412840 | Msa0984220 | -0.818230 | 2.184538e-52 | -8.615850e-47 |
| Msa0457510 | Msa0984220 | -0.808070 | 3.709905e-50 | -8.615850e-47 |
| Msa0473730 | Msa0984220 | 0.994321 | 2.623743e-206 | -8.615850e-47 |
| Msa0477080 | Msa0984220 | -0.807173 | 5.751435e-50 | -8.615850e-47 |
| Msa0984220 | Msa1016910 | -0.806450 | 8.176313e-50 | -8.615850e-47 |
| Msa0984220 | Msa1058170 | -0.840562 | 8.071434e-58 | -8.615850e-47 |
| Msa0984220 | Msa1077130 | -0.815199 | 1.044971e-51 | -8.615850e-47 |
| Msa0984220 | Msa1077200 | -0.809492 | 1.842310e-50 | -8.615850e-47 |
| Msa0984220 | Msa1102790 | -0.823807 | 1.135301e-53 | -8.615850e-47 |
| Msa0984220 | Msa1191050 | 0.836967 | 6.859396e-57 | -8.615850e-47 |
| Msa0984220 | Msa1244720 | 0.862344 | 5.416868e-64 | -8.615850e-47 |
| Msa0984220 | Msa1255330 | -0.807382 | 5.193636e-50 | -8.615850e-47 |
| Msa0984220 | Msa1295950 | -0.814987 | 1.164343e-51 | -8.615850e-47 |
| Msa0984220 | Msa1325860 | 0.802998 | 4.298735e-49 | -8.615850e-47 |
| Msa0984220 | Msa1331320 | -0.812027 | 5.211201e-51 | -8.615850e-47 |
| Msa0984220 | Msa1403340 | -0.820643 | 6.153768e-53 | -8.615850e-47 |
| Msa0984220 | Msa1404300 | -0.809565 | 1.776954e-50 | -8.615850e-47 |
| Msa0984220 | Msa1406110 | 0.821786 | 3.355719e-53 | -8.615850e-47 |
| Msa0984220 | Msa1444740 | -0.827793 | 1.285522e-54 | -8.615850e-47 |
| Msa0493630 | Msa0984220 | -0.824634 | 7.256104e-54 | -8.615850e-47 |
| Msa0517760 | Msa0984220 | 0.933253 | 2.488559e-95 | -8.615850e-47 |
| Msa0517830 | Msa0984220 | 0.918916 | 8.622680e-87 | -8.615850e-47 |
| Msa0521430 | Msa0984220 | -0.809711 | 1.653039e-50 | -8.615850e-47 |
| Msa0528610 | Msa0984220 | 0.840410 | 8.840741e-58 | -8.615850e-47 |
| Msa0862110 | Msa0984220 | -0.806515 | 7.925177e-50 | -8.615850e-47 |
| Msa0946280 | Msa0984220 | 0.848484 | 5.953754e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0984220 | MtrunA17_Chr3g0129641 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 783 |
| Msa0984220 | MtrunA17_Chr1g0175391 | 95.756 | 377 | 16 | 0 | 1 | 377 | 1 | 377 | 0.0 | 763 |
| Msa0984220 | MtrunA17_Chr7g0223901 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| Msa0984220 | MtrunA17_Chr7g0258721 | 95.756 | 377 | 16 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
| Msa0984220 | MtrunA17_Chr2g0328091 | 94.960 | 377 | 19 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
| Msa0984220 | MtrunA17_Chr6g0448881 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
| Msa0984220 | MtrunA17_Chr2g0278591 | 94.695 | 377 | 20 | 0 | 1 | 377 | 1 | 377 | 0.0 | 754 |
| Msa0984220 | MtrunA17_Chr7g0224401 | 43.799 | 379 | 199 | 3 | 10 | 374 | 7 | 385 | 3.02e-121 | 355 |
| Msa0984220 | MtrunA17_Chr8g0361001 | 37.220 | 446 | 207 | 11 | 1 | 376 | 1 | 443 | 1.69e-91 | 281 |
| Msa0984220 | MtrunA17_Chr5g0427591 | 37.220 | 446 | 207 | 11 | 1 | 376 | 1 | 443 | 1.87e-91 | 281 |
| Msa0984220 | MtrunA17_Chr8g0381261 | 34.474 | 409 | 222 | 8 | 10 | 372 | 10 | 418 | 3.32e-72 | 231 |
| Msa0984220 | MtrunA17_Chr3g0089031 | 37.105 | 380 | 213 | 9 | 7 | 377 | 1 | 363 | 1.60e-68 | 220 |
| Msa0984220 | MtrunA17_Chr2g0305361 | 27.880 | 434 | 247 | 7 | 8 | 377 | 6 | 437 | 4.80e-57 | 192 |
| Msa0984220 | MtrunA17_Chr3g0080021 | 30.976 | 297 | 181 | 9 | 91 | 371 | 179 | 467 | 9.82e-40 | 147 |
| Msa0984220 | MtrunA17_Chr8g0369101 | 32.082 | 293 | 172 | 10 | 91 | 366 | 187 | 469 | 3.03e-37 | 140 |
| Msa0984220 | MtrunA17_Chr3g0111971 | 30.556 | 252 | 156 | 7 | 9 | 245 | 21 | 268 | 6.19e-24 | 103 |
| Msa0984220 | MtrunA17_Chr3g0111971 | 34.426 | 122 | 77 | 2 | 250 | 368 | 586 | 707 | 4.81e-16 | 79.7 |
| Msa0984220 | MtrunA17_Chr8g0336071 | 40.000 | 95 | 57 | 0 | 105 | 199 | 1 | 95 | 3.35e-19 | 82.0 |
| Msa0984220 | MtrunA17_Chr8g0336061 | 39.130 | 92 | 43 | 1 | 241 | 319 | 12 | 103 | 3.60e-18 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0984220 | AT5G09810.1 | 98.408 | 377 | 6 | 0 | 1 | 377 | 1 | 377 | 0.0 | 774 |
| Msa0984220 | AT3G53750.1 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 760 |
| Msa0984220 | AT3G53750.2 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 760 |
| Msa0984220 | AT2G37620.1 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 760 |
| Msa0984220 | AT2G37620.3 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 760 |
| Msa0984220 | AT2G37620.2 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 760 |
| Msa0984220 | AT2G37620.4 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 760 |
| Msa0984220 | AT3G12110.1 | 95.491 | 377 | 17 | 0 | 1 | 377 | 1 | 377 | 0.0 | 760 |
| Msa0984220 | AT3G46520.2 | 94.430 | 377 | 21 | 0 | 1 | 377 | 1 | 377 | 0.0 | 749 |
| Msa0984220 | AT3G46520.1 | 94.430 | 377 | 21 | 0 | 1 | 377 | 1 | 377 | 0.0 | 749 |
| Msa0984220 | AT1G49240.1 | 93.369 | 377 | 25 | 0 | 1 | 377 | 1 | 377 | 0.0 | 749 |
| Msa0984220 | AT5G59370.2 | 94.164 | 377 | 22 | 0 | 1 | 377 | 1 | 377 | 0.0 | 748 |
| Msa0984220 | AT5G59370.1 | 94.164 | 377 | 22 | 0 | 1 | 377 | 1 | 377 | 0.0 | 748 |
| Msa0984220 | AT3G18780.2 | 93.103 | 377 | 26 | 0 | 1 | 377 | 1 | 377 | 0.0 | 747 |
| Msa0984220 | AT3G18780.3 | 93.103 | 377 | 26 | 0 | 1 | 377 | 1 | 377 | 0.0 | 747 |
| Msa0984220 | AT3G18780.1 | 92.521 | 361 | 27 | 0 | 1 | 361 | 1 | 361 | 0.0 | 707 |
| Msa0984220 | AT2G42100.1 | 84.511 | 368 | 57 | 0 | 10 | 377 | 11 | 378 | 0.0 | 674 |
| Msa0984220 | AT2G42090.1 | 71.622 | 370 | 100 | 1 | 7 | 376 | 1 | 365 | 0.0 | 569 |
| Msa0984220 | AT2G42170.1 | 78.313 | 332 | 69 | 1 | 46 | 377 | 1 | 329 | 0.0 | 560 |
| Msa0984220 | AT2G42170.3 | 78.313 | 332 | 69 | 1 | 46 | 377 | 1 | 329 | 0.0 | 560 |
| Msa0984220 | AT2G42170.4 | 78.526 | 312 | 64 | 1 | 46 | 357 | 1 | 309 | 0.0 | 523 |
| Msa0984220 | AT2G42170.2 | 78.526 | 312 | 64 | 1 | 46 | 357 | 1 | 309 | 0.0 | 523 |
| Msa0984220 | AT2G42170.5 | 78.319 | 226 | 46 | 1 | 152 | 377 | 9 | 231 | 2.52e-131 | 375 |
| Msa0984220 | AT3G27000.1 | 44.591 | 379 | 196 | 4 | 10 | 374 | 7 | 385 | 1.16e-122 | 360 |
| Msa0984220 | AT1G18450.1 | 38.202 | 445 | 201 | 11 | 1 | 376 | 1 | 440 | 8.92e-95 | 290 |
| Msa0984220 | AT1G13180.1 | 34.867 | 413 | 215 | 10 | 10 | 372 | 9 | 417 | 1.60e-72 | 233 |
| Msa0984220 | AT3G60830.1 | 37.467 | 379 | 213 | 9 | 7 | 377 | 1 | 363 | 1.72e-66 | 215 |
| Msa0984220 | AT3G33520.1 | 30.404 | 421 | 235 | 7 | 10 | 377 | 5 | 420 | 3.72e-59 | 197 |
| Msa0984220 | AT5G56180.3 | 30.928 | 291 | 175 | 9 | 91 | 364 | 50 | 331 | 2.05e-35 | 132 |
| Msa0984220 | AT5G56180.1 | 30.928 | 291 | 175 | 9 | 91 | 364 | 182 | 463 | 1.20e-34 | 133 |
| Msa0984220 | AT3G12380.2 | 29.572 | 257 | 158 | 6 | 9 | 245 | 21 | 274 | 3.56e-26 | 110 |
| Msa0984220 | AT3G12380.2 | 34.426 | 122 | 77 | 1 | 250 | 368 | 595 | 716 | 6.11e-16 | 80.1 |
| Msa0984220 | AT3G12380.1 | 29.412 | 255 | 155 | 6 | 9 | 245 | 21 | 268 | 1.80e-25 | 108 |
| Msa0984220 | AT3G12380.1 | 34.426 | 122 | 77 | 1 | 250 | 368 | 589 | 710 | 5.87e-16 | 80.1 |
| Msa0984220 | AT1G73910.1 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.72e-23 | 95.1 |
| Msa0984220 | AT1G73910.2 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.72e-23 | 95.1 |
| Msa0984220 | AT5G56180.2 | 31.683 | 202 | 115 | 7 | 91 | 281 | 182 | 371 | 4.67e-19 | 88.2 |
| Msa0984220 | AT1G73910.3 | 29.268 | 123 | 71 | 2 | 1 | 107 | 1 | 123 | 2.87e-12 | 65.1 |
Find 183 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATTGAATTTGGAAATT+TGG | 0.077352 | 6_4:+28053474 | None:intergenic |
| GGCAACCAGGCAACCCTTTC+CGG | 0.138198 | 6_4:+28050427 | None:intergenic |
| GTTAATTTGAAAATTGAATT+TGG | 0.146908 | 6_4:+28053466 | None:intergenic |
| TATCTTCCATTTCAAAATTT+TGG | 0.151507 | 6_4:-28053504 | Msa0984220:five_prime_UTR |
| TCAAATGTAAAATCTGAAAA+AGG | 0.170768 | 6_4:+28050700 | None:intergenic |
| TAGAGAGAGGAGAGAGAAAT+AGG | 0.191896 | 6_4:+28053528 | None:intergenic |
| GGGAGAGGGGTATTTATATT+AGG | 0.194944 | 6_4:+28053376 | None:intergenic |
| TGAAAGTCTCAAACATGATT+TGG | 0.224034 | 6_4:+28051875 | None:intergenic |
| AAAATTGAATTTGGAAATTT+GGG | 0.231590 | 6_4:+28053475 | None:intergenic |
| TTACCATTATCGCATCATTT+TGG | 0.235445 | 6_4:+28050923 | None:intergenic |
| AGAGAGAAGAGGATTGAAAA+TGG | 0.253575 | 6_4:+28053355 | None:intergenic |
| AGAAGCACTGGGTGCTCTTC+AGG | 0.266274 | 6_4:+28051943 | None:intergenic |
| GGAGAGAGTGGCGTGGGTTT+AGG | 0.273229 | 6_4:+28053399 | None:intergenic |
| CCGTGAGAGTAGAGAGAAAA+TGG | 0.276319 | 6_4:+28053258 | None:intergenic |
| GAGAGTAAGAATACCTCTTT+TGG | 0.276320 | 6_4:+28052056 | None:intergenic |
| GGAGAGGGGTATTTATATTA+GGG | 0.299095 | 6_4:+28053377 | None:intergenic |
| GATGGTTGGAAAAGGACTTC+TGG | 0.306272 | 6_4:+28051381 | None:intergenic |
| AGCACGGTATTGTCAGTAAC+TGG | 0.314467 | 6_4:-28052020 | Msa0984220:CDS |
| ACAGGTATTGTGTTGGATTC+CGG | 0.317257 | 6_4:-28051708 | Msa0984220:intron |
| TGTTTGAAGTCTCTCTTTCT+CGG | 0.325778 | 6_4:+28053311 | None:intergenic |
| CTGACAATACCGTGCTCAAT+GGG | 0.336851 | 6_4:+28052027 | None:intergenic |
| ATCCTTCGTTTGGATCTTGC+TGG | 0.344358 | 6_4:-28051630 | Msa0984220:CDS |
| TCCTAGCAGCATGAAGATTA+AGG | 0.346598 | 6_4:-28051190 | Msa0984220:CDS |
| GGTGGTTCAACTATGTTTCC+TGG | 0.355516 | 6_4:-28051252 | Msa0984220:CDS |
| TGTGTGCAGGCTGGATTTGC+TGG | 0.360977 | 6_4:-28052189 | Msa0984220:intron |
| GAAAGTCTCAAACATGATTT+GGG | 0.367813 | 6_4:+28051876 | None:intergenic |
| AGTCCAAAATGATGCGATAA+TGG | 0.369879 | 6_4:-28050926 | Msa0984220:three_prime_UTR |
| GCTTCCATTCCGATCATTGA+TGG | 0.371444 | 6_4:+28051363 | None:intergenic |
| CTATTGGCCTTTGGGTTAAG+TGG | 0.372320 | 6_4:+28051910 | None:intergenic |
| TTGGTGTCTCTGTCATGTTA+TGG | 0.375712 | 6_4:-28050876 | Msa0984220:three_prime_UTR |
| GCAACCAGGCAACCCTTTCC+GGG | 0.377683 | 6_4:+28050428 | None:intergenic |
| TACTGGTGTCATGGTTGGTA+TGG | 0.381549 | 6_4:-28052115 | Msa0984220:CDS |
| CCCACATGCTATCCTTCGTT+TGG | 0.383523 | 6_4:-28051640 | Msa0984220:CDS |
| CAAAATTAAAATTTGAGATC+GGG | 0.390966 | 6_4:+28050406 | None:intergenic |
| GATGAGTGACCGTAATAAAA+TGG | 0.398429 | 6_4:+28053444 | None:intergenic |
| TGAATTTGGAAATTTGGGTT+AGG | 0.404652 | 6_4:+28053480 | None:intergenic |
| CGAGGTCGGCCAACAATACT+TGG | 0.411313 | 6_4:+28052141 | None:intergenic |
| TCTGTAGATCCACGTAAATC+AGG | 0.413472 | 6_4:+28050457 | None:intergenic |
| TACGGCAACATTGTTCTTAG+TGG | 0.417976 | 6_4:-28051273 | Msa0984220:CDS |
| ATGGTTGGAAAAGGACTTCT+GGG | 0.420047 | 6_4:+28051382 | None:intergenic |
| AGAGAGAGGAGAGAGAAATA+GGG | 0.420412 | 6_4:+28053529 | None:intergenic |
| CGTGGGTTTAGGTGTGGTTG+TGG | 0.430142 | 6_4:+28053410 | None:intergenic |
| GGAAATTGTCCGTGACATAA+AGG | 0.432407 | 6_4:-28051535 | Msa0984220:CDS |
| GAGAGAAGAGGATTGAAAAT+GGG | 0.432634 | 6_4:+28053356 | None:intergenic |
| TATGCAAGTGGTCGTACAAC+TGG | 0.432992 | 6_4:-28051808 | Msa0984220:intron |
| GTTGGCCGACCTCGTCATAC+TGG | 0.436618 | 6_4:-28052132 | Msa0984220:CDS |
| CTTGTTTGTGACAATGGAAC+TGG | 0.436831 | 6_4:-28052305 | Msa0984220:CDS |
| TCTTCATGCTGCTAGGAGCC+AGG | 0.437433 | 6_4:+28051196 | None:intergenic |
| CAACCCCTTGTTTGTGACAA+TGG | 0.439095 | 6_4:-28052311 | Msa0984220:CDS |
| TTCTCTCAGTACTTTCCAGC+AGG | 0.448158 | 6_4:-28051112 | Msa0984220:intron |
| GGAGCCTCAGTTAGAAGCAC+TGG | 0.448567 | 6_4:+28051931 | None:intergenic |
| TTGCTGGTGATGATGCTCCT+AGG | 0.448710 | 6_4:-28052173 | Msa0984220:CDS |
| GCTGTGTTTCCAAGTATTGT+TGG | 0.449099 | 6_4:-28052150 | Msa0984220:CDS |
| CGCCATGTATGTGGCCATCC+AGG | 0.449438 | 6_4:-28051845 | Msa0984220:CDS |
| GTGGGTTTAGGTGTGGTTGT+GGG | 0.450335 | 6_4:+28053411 | None:intergenic |
| ACACTTCATGATAGAGTTGT+AGG | 0.451087 | 6_4:+28051320 | None:intergenic |
| GATGGACAAGTTATCACAAT+TGG | 0.452391 | 6_4:-28051423 | Msa0984220:CDS |
| AGAAAGTACAGTGTGTGGAT+TGG | 0.454365 | 6_4:-28051150 | Msa0984220:CDS |
| GAGAGAAAATGGATCGAAGA+GGG | 0.455295 | 6_4:+28053269 | None:intergenic |
| ATTGTGATAACTTGTCCATC+AGG | 0.464957 | 6_4:+28051426 | None:intergenic |
| CACACACTGTACTTTCTCTC+TGG | 0.465571 | 6_4:+28051156 | None:intergenic |
| AACTGTTGTTTAGCAAAAGA+TGG | 0.467108 | 6_4:-28052351 | Msa0984220:intron |
| CATTTCCTGTGGACAATGGA+TGG | 0.469196 | 6_4:+28050955 | None:intergenic |
| CGATCATTGATGGTTGGAAA+AGG | 0.470418 | 6_4:+28051373 | None:intergenic |
| CCAAAATTAAAATTTGAGAT+CGG | 0.476263 | 6_4:+28050405 | None:intergenic |
| TACAGAATTATTCCCGGAAA+GGG | 0.476794 | 6_4:-28050440 | Msa0984220:three_prime_UTR |
| GGGATGACATGGAGAAGATC+TGG | 0.479434 | 6_4:-28051999 | Msa0984220:CDS |
| TAGGTTGGTTGCCTGTAGTA+AGG | 0.480909 | 6_4:-28050763 | Msa0984220:three_prime_UTR |
| GAAGCTTGCATATGTTGCCT+TGG | 0.482032 | 6_4:-28051511 | Msa0984220:CDS |
| TATTCCCGGAAAGGGTTGCC+TGG | 0.483405 | 6_4:-28050432 | Msa0984220:three_prime_UTR |
| AGCCTGGATGGCCACATACA+TGG | 0.486225 | 6_4:+28051843 | None:intergenic |
| TGGATCTACAGAATTATTCC+CGG | 0.491747 | 6_4:-28050446 | Msa0984220:three_prime_UTR |
| TCACACTGTGCCAATCTATG+AGG | 0.492803 | 6_4:-28051673 | Msa0984220:CDS |
| ACTGACAATACCGTGCTCAA+TGG | 0.496612 | 6_4:+28052026 | None:intergenic |
| ATGAAGATCCTCACTGAGAG+AGG | 0.498979 | 6_4:-28051585 | Msa0984220:CDS |
| AAGGGTGAATATGACGAGTC+TGG | 0.499493 | 6_4:-28050979 | Msa0984220:CDS |
| AAGTACAGTGTGTGGATTGG+AGG | 0.499666 | 6_4:-28051147 | Msa0984220:CDS |
| CAGCATGAAGATTAAGGTTG+TGG | 0.500086 | 6_4:-28051184 | Msa0984220:CDS |
| CATAAACATGACGTTCCAAA+AGG | 0.501322 | 6_4:+28050657 | None:intergenic |
| GTTCACCACCTCAGCTGAGC+GGG | 0.502382 | 6_4:-28051556 | Msa0984220:CDS |
| AGTGCATAACCCTCATAGAT+TGG | 0.503175 | 6_4:+28051663 | None:intergenic |
| CCATTCCGATCATTGATGGT+TGG | 0.507915 | 6_4:+28051367 | None:intergenic |
| CTCATACGGTCAGCAATACC+AGG | 0.512812 | 6_4:+28051234 | None:intergenic |
| AAGAGGATTGAAAATGGGAG+AGG | 0.513489 | 6_4:+28053361 | None:intergenic |
| TGCTGGTGATGATGCTCCTA+GGG | 0.516201 | 6_4:-28052172 | Msa0984220:CDS |
| CATAGAGGGAGAGGACAGCC+TGG | 0.522013 | 6_4:+28051827 | None:intergenic |
| TTGGGCTTCGTCACCAACAT+AGG | 0.522846 | 6_4:+28052080 | None:intergenic |
| AGAGGATTGAAAATGGGAGA+GGG | 0.523813 | 6_4:+28053362 | None:intergenic |
| CAGTTCCATTGTCACAAACA+AGG | 0.524372 | 6_4:+28052306 | None:intergenic |
| GGCAACATTGTTCTTAGTGG+TGG | 0.526272 | 6_4:-28051270 | Msa0984220:CDS |
| GAGCAAGGAGATCACTGCCC+TGG | 0.526620 | 6_4:-28051214 | Msa0984220:CDS |
| ACCAACCTACAGACATCCAG+TGG | 0.530029 | 6_4:+28050777 | None:intergenic |
| CAGTGATCTCCTTGCTCATA+CGG | 0.530919 | 6_4:+28051220 | None:intergenic |
| CCAACCATCAATGATCGGAA+TGG | 0.531135 | 6_4:-28051367 | Msa0984220:CDS |
| CATGGTTGGTATGGGTCAAA+AGG | 0.532081 | 6_4:-28052106 | Msa0984220:CDS |
| GAGGATTGAAAATGGGAGAG+GGG | 0.534813 | 6_4:+28053363 | None:intergenic |
| ATTGTGTTGGATTCCGGCGA+TGG | 0.537139 | 6_4:-28051702 | Msa0984220:CDS |
| TTAATTGATATATTTGACTC+GGG | 0.539777 | 6_4:-28050339 | Msa0984220:three_prime_UTR |
| ACTGGTGTCATGGTTGGTAT+GGG | 0.539815 | 6_4:-28052114 | Msa0984220:CDS |
| ACCTCGTCATACTGGTGTCA+TGG | 0.540702 | 6_4:-28052124 | Msa0984220:CDS |
| GACAATTTCCCGCTCAGCTG+AGG | 0.541645 | 6_4:+28051548 | None:intergenic |
| CCCACTGGATGTCTGTAGGT+TGG | 0.541714 | 6_4:-28050778 | Msa0984220:three_prime_UTR |
| AATGTTCTGTGGCAGCCCAC+TGG | 0.541871 | 6_4:-28050793 | Msa0984220:three_prime_UTR |
| ACACTGTACTTTCTCTCTGG+TGG | 0.542019 | 6_4:+28051159 | None:intergenic |
| ATGATCGGAATGGAAGCTGC+TGG | 0.546973 | 6_4:-28051357 | Msa0984220:CDS |
| TGCTTCTATGCATCGCATCA+TGG | 0.551689 | 6_4:-28050532 | Msa0984220:three_prime_UTR |
| ATTTATATTAGGGGAGAGAG+TGG | 0.553278 | 6_4:+28053387 | None:intergenic |
| GGTGAGAAATGAGAGAGAAG+AGG | 0.555613 | 6_4:+28053344 | None:intergenic |
| ACTATGTTGACATGGATAAG+AGG | 0.557588 | 6_4:-28050852 | Msa0984220:three_prime_UTR |
| TTTAATTGATATATTTGACT+CGG | 0.559293 | 6_4:-28050340 | Msa0984220:three_prime_UTR |
| TCACAATCACTCCTTACTAC+AGG | 0.560040 | 6_4:+28050752 | None:intergenic |
| CTACAGAATTATTCCCGGAA+AGG | 0.561185 | 6_4:-28050441 | Msa0984220:three_prime_UTR |
| TGTACGACCACTTGCATAGA+GGG | 0.561313 | 6_4:+28051813 | None:intergenic |
| AGTTCCATTGTCACAAACAA+GGG | 0.561709 | 6_4:+28052307 | None:intergenic |
| TGTCAGTAACTGGGATGACA+TGG | 0.562581 | 6_4:-28052010 | Msa0984220:CDS |
| GAGGGAGAGGACAGCCTGGA+TGG | 0.565012 | 6_4:+28051831 | None:intergenic |
| CTCTTTCTCGGCGAGAAGTG+TGG | 0.566173 | 6_4:+28053323 | None:intergenic |
| TTTACTACGCCTGATTTACG+TGG | 0.568583 | 6_4:-28050466 | Msa0984220:three_prime_UTR |
| TTGTACGACCACTTGCATAG+AGG | 0.570654 | 6_4:+28051812 | None:intergenic |
| AGACTCGTCATATTCACCCT+TGG | 0.570952 | 6_4:+28050981 | None:intergenic |
| AATTTCCCGCTCAGCTGAGG+TGG | 0.571031 | 6_4:+28051551 | None:intergenic |
| AAGTTCTTGTTCATAATCCA+AGG | 0.571032 | 6_4:+28051494 | None:intergenic |
| AGAGAAAATGGATCGAAGAG+GGG | 0.571490 | 6_4:+28053270 | None:intergenic |
| ATACTTGGAAACACAGCCCT+AGG | 0.573620 | 6_4:+28052156 | None:intergenic |
| CGTCATACTGGTGTCATGGT+TGG | 0.573856 | 6_4:-28052120 | Msa0984220:CDS |
| ACATGGATAAGAGGTGAGAT+CGG | 0.577014 | 6_4:-28050843 | Msa0984220:three_prime_UTR |
| CTTCATGCTGCTAGGAGCCA+GGG | 0.577950 | 6_4:+28051197 | None:intergenic |
| GAAGCATTTCCTGTGGACAA+TGG | 0.580709 | 6_4:+28050951 | None:intergenic |
| ATTAGGGGAGAGAGTGGCGT+GGG | 0.583614 | 6_4:+28053393 | None:intergenic |
| CAAGCTTCTCCTTTATGTCA+CGG | 0.584330 | 6_4:+28051526 | None:intergenic |
| GACCACTTGCATAGAGGGAG+AGG | 0.585397 | 6_4:+28051818 | None:intergenic |
| CTGGCCCATCCATTGTCCAC+AGG | 0.585546 | 6_4:-28050960 | Msa0984220:CDS |
| GCAAAAGATGGCAGATGCTG+AGG | 0.585999 | 6_4:-28052339 | Msa0984220:exon |
| CAATGTGCCCGCCATGTATG+TGG | 0.588880 | 6_4:-28051854 | Msa0984220:CDS |
| GGATAAGAGGTGAGATCGGA+GGG | 0.589179 | 6_4:-28050839 | Msa0984220:three_prime_UTR |
| TGGATGGCCACATACATGGC+GGG | 0.589918 | 6_4:+28051847 | None:intergenic |
| GACGAAGCCCAATCCAAAAG+AGG | 0.590961 | 6_4:-28052069 | Msa0984220:CDS |
| GATATCAGAAAAGATCTGTA+CGG | 0.594697 | 6_4:-28051291 | Msa0984220:CDS |
| GTCCTCTCCCTCTATGCAAG+TGG | 0.594901 | 6_4:-28051820 | Msa0984220:CDS |
| GAGTGGCGTGGGTTTAGGTG+TGG | 0.596842 | 6_4:+28053404 | None:intergenic |
| AAATGGAAGATACTAGAGAG+AGG | 0.598442 | 6_4:+28053515 | None:intergenic |
| ATTTCCTGTGGACAATGGAT+GGG | 0.598758 | 6_4:+28050956 | None:intergenic |
| ACCTTAATCTTCATGCTGCT+AGG | 0.600175 | 6_4:+28051189 | None:intergenic |
| GCAGCCCACTGGATGTCTGT+AGG | 0.600795 | 6_4:-28050782 | Msa0984220:three_prime_UTR |
| TTGATTTATCAAATGTTCTG+TGG | 0.602809 | 6_4:-28050804 | Msa0984220:three_prime_UTR |
| AGAGAGAAAATGGATCGAAG+AGG | 0.604246 | 6_4:+28053268 | None:intergenic |
| TTTGCAGATGTGGATATCCA+AGG | 0.604467 | 6_4:-28050998 | Msa0984220:intron |
| AAATTTGAGATCGGGCAACC+AGG | 0.607557 | 6_4:+28050414 | None:intergenic |
| CTCAAGTACCCCATTGAGCA+CGG | 0.608960 | 6_4:-28052036 | Msa0984220:CDS |
| CACACTGTGCCAATCTATGA+GGG | 0.612158 | 6_4:-28051672 | Msa0984220:CDS |
| TATTGCTGACCGTATGAGCA+AGG | 0.626661 | 6_4:-28051229 | Msa0984220:CDS |
| CAGAGAGAAAGTACAGTGTG+TGG | 0.628344 | 6_4:-28051155 | Msa0984220:CDS |
| GAGAGGGGTATTTATATTAG+GGG | 0.630191 | 6_4:+28053378 | None:intergenic |
| GAGCCTCAGTTAGAAGCACT+GGG | 0.630481 | 6_4:+28051932 | None:intergenic |
| AGTGTGACTCACACCATCGC+CGG | 0.631174 | 6_4:+28051689 | None:intergenic |
| TGGATAAGAGGTGAGATCGG+AGG | 0.631713 | 6_4:-28050840 | Msa0984220:three_prime_UTR |
| GCACGGTATTGTCAGTAACT+GGG | 0.632162 | 6_4:-28052019 | Msa0984220:CDS |
| GGTCAAAAGGATGCCTATGT+TGG | 0.633441 | 6_4:-28052093 | Msa0984220:CDS |
| TCCAAACGAAGGATAGCATG+TGG | 0.637382 | 6_4:+28051639 | None:intergenic |
| TTGTGACAATGGAACTGGAA+TGG | 0.639550 | 6_4:-28052300 | Msa0984220:CDS |
| CTCTATCATGAAGTGTGATG+TGG | 0.640270 | 6_4:-28051313 | Msa0984220:CDS |
| GGACTTAGAAGCATTTCCTG+TGG | 0.642629 | 6_4:+28050944 | None:intergenic |
| GGAAAAGGACTTCTGGGCAA+CGG | 0.648496 | 6_4:+28051388 | None:intergenic |
| GGAAAGTACTGAGAGAAGCA+AGG | 0.656348 | 6_4:+28051118 | None:intergenic |
| GTTCCATTGTCACAAACAAG+GGG | 0.658903 | 6_4:+28052308 | None:intergenic |
| CAATGGAACTGGAATGGTGA+AGG | 0.661223 | 6_4:-28052294 | Msa0984220:intron |
| TGAAGATCCTCACTGAGAGA+GGG | 0.661425 | 6_4:-28051584 | Msa0984220:CDS |
| TTATCACAATTGGAGCTGAG+AGG | 0.664936 | 6_4:-28051413 | Msa0984220:CDS |
| TGAGGCTCCACTTAACCCAA+AGG | 0.668440 | 6_4:-28051917 | Msa0984220:CDS |
| TGACACCAGTATGACGAGGT+CGG | 0.672228 | 6_4:+28052127 | None:intergenic |
| GCACCCAGTGCTTCTAACTG+AGG | 0.673440 | 6_4:-28051935 | Msa0984220:CDS |
| CCAAACGAAGGATAGCATGT+GGG | 0.675471 | 6_4:+28051640 | None:intergenic |
| TTGCAGATGTGGATATCCAA+GGG | 0.681771 | 6_4:-28050997 | Msa0984220:intron |
| CTGGATGGCCACATACATGG+CGG | 0.687535 | 6_4:+28051846 | None:intergenic |
| CTTCATGATAGAGTTGTAGG+TGG | 0.694993 | 6_4:+28051323 | None:intergenic |
| GTTATGGAACTATGTTGACA+TGG | 0.703939 | 6_4:-28050860 | Msa0984220:three_prime_UTR |
| GACCAGCAAGATCCAAACGA+AGG | 0.704830 | 6_4:+28051628 | None:intergenic |
| ACATGTACCCTCTCTCAGTG+AGG | 0.709732 | 6_4:+28051577 | None:intergenic |
| TATTAGGGGAGAGAGTGGCG+TGG | 0.717542 | 6_4:+28053392 | None:intergenic |
| TGACAATACCGTGCTCAATG+GGG | 0.720666 | 6_4:+28052028 | None:intergenic |
| TGTTCACCACCTCAGCTGAG+CGG | 0.722178 | 6_4:-28051557 | Msa0984220:CDS |
| CCAACCTACAGACATCCAGT+GGG | 0.728027 | 6_4:+28050778 | None:intergenic |
| ACCATGACACCAGTATGACG+AGG | 0.732971 | 6_4:+28052123 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATTATCAATAAATAAAA+CGG | + | chr6_4:28051342-28051361 | None:intergenic | 10.0% |
| !!! | TAATCTTTTAAATTTGTAAT+TGG | - | chr6_4:28051435-28051454 | Msa0984220:CDS | 10.0% |
| !!! | TTTTTTTTTTTTTTTCCTTT+TGG | - | chr6_4:28053193-28053212 | Msa0984220:intron | 10.0% |
| !! | AAAATTGAATTTGGAAATTT+GGG | + | chr6_4:28050393-28050412 | None:intergenic | 15.0% |
| !!! | GTTAATTTGAAAATTGAATT+TGG | + | chr6_4:28050402-28050421 | None:intergenic | 15.0% |
| !!! | TCAAATTAACCATTTTATTA+CGG | - | chr6_4:28050412-28050431 | Msa0984220:three_prime_UTR | 15.0% |
| !! | AACTAAATAAAGTTCTATAA+AGG | + | chr6_4:28051090-28051109 | None:intergenic | 15.0% |
| !!! | TAGAACTTTATTTAGTTATT+AGG | - | chr6_4:28051093-28051112 | Msa0984220:intron | 15.0% |
| !!! | ATTTAGTTATTAGGAAATTT+TGG | - | chr6_4:28051102-28051121 | Msa0984220:intron | 15.0% |
| !! | TTTAATTGATATATTTGACT+CGG | - | chr6_4:28053525-28053544 | Msa0984220:five_prime_UTR | 15.0% |
| !!! | TATCTTCCATTTCAAAATTT+TGG | - | chr6_4:28050361-28050380 | Msa0984220:three_prime_UTR | 20.0% |
| !! | GAAAATTGAATTTGGAAATT+TGG | + | chr6_4:28050394-28050413 | None:intergenic | 20.0% |
| !! | ATCTAAACCTAAATAATGAT+CGG | + | chr6_4:28050673-28050692 | None:intergenic | 20.0% |
| !!! | TATACAATGTGAACTTTTTA+TGG | - | chr6_4:28051370-28051389 | Msa0984220:CDS | 20.0% |
| !! | ATCGTTAATAACAATTCAAA+TGG | + | chr6_4:28051479-28051498 | None:intergenic | 20.0% |
| !! | TTCAAAAATGAAAAGATTGA+GGG | + | chr6_4:28052137-28052156 | None:intergenic | 20.0% |
| !! | TTTCAAAAATGAAAAGATTG+AGG | + | chr6_4:28052138-28052157 | None:intergenic | 20.0% |
| !!! | AATCTTTTCATTTTTGAAAC+AGG | - | chr6_4:28052139-28052158 | Msa0984220:CDS | 20.0% |
| !! | CAAATGTAAAATCTGAAAAA+GGG | + | chr6_4:28053167-28053186 | None:intergenic | 20.0% |
| !! | TCAAATGTAAAATCTGAAAA+AGG | + | chr6_4:28053168-28053187 | None:intergenic | 20.0% |
| !!! | TTTTCAGATTTTACATTTGA+AGG | - | chr6_4:28053168-28053187 | Msa0984220:intron | 20.0% |
| !!! | CAAAATTAAAATTTGAGATC+GGG | + | chr6_4:28053462-28053481 | None:intergenic | 20.0% |
| !!! | CCAAAATTAAAATTTGAGAT+CGG | + | chr6_4:28053463-28053482 | None:intergenic | 20.0% |
| !!! | TTTAATTTTGGATGAAAGAA+AGG | - | chr6_4:28053472-28053491 | Msa0984220:five_prime_UTR | 20.0% |
| !! | TTAATTGATATATTTGACTC+GGG | - | chr6_4:28053526-28053545 | Msa0984220:five_prime_UTR | 20.0% |
| !!! | TTAGGACCAAAATTTTGAAA+TGG | + | chr6_4:28050370-28050389 | None:intergenic | 25.0% |
| !! | TTTTGTTCCGATCATTATTT+AGG | - | chr6_4:28050663-28050682 | Msa0984220:three_prime_UTR | 25.0% |
| ! | ACTAAAACTGAATGAACAAT+CGG | + | chr6_4:28050742-28050761 | None:intergenic | 25.0% |
| ! | GAATCTATTCGAAAATGTTT+GGG | - | chr6_4:28050983-28051002 | Msa0984220:CDS | 25.0% |
| ! | CATTTGCAATAAGAAACTTT+AGG | - | chr6_4:28051162-28051181 | Msa0984220:CDS | 25.0% |
| ! | TTGATTTATCAAATGTTCTG+TGG | - | chr6_4:28053061-28053080 | Msa0984220:intron | 25.0% |
| !!! | CCGATCTCAAATTTTAATTT+TGG | - | chr6_4:28053460-28053479 | Msa0984220:five_prime_UTR | 25.0% |
| ! | TGAATTTGGAAATTTGGGTT+AGG | + | chr6_4:28050388-28050407 | None:intergenic | 30.0% |
| ! | GATTCTGATCTTTTACATAC+TGG | - | chr6_4:28050934-28050953 | Msa0984220:exon | 30.0% |
| GGAATCTATTCGAAAATGTT+TGG | - | chr6_4:28050982-28051001 | Msa0984220:CDS | 30.0% | |
| !! | TGATTTGTTCACTGGATTTA+TGG | - | chr6_4:28051012-28051031 | Msa0984220:intron | 30.0% |
| !! | TCTGTTTTTCTTTGAAAAGC+CGG | - | chr6_4:28051274-28051293 | Msa0984220:CDS | 30.0% |
| ! | AACTGTTGTTTAGCAAAAGA+TGG | - | chr6_4:28051514-28051533 | Msa0984220:CDS | 30.0% |
| ! | AAGAATACCTCTTTTGGATT+GGG | + | chr6_4:28051806-28051825 | None:intergenic | 30.0% |
| ! | TAAGAATACCTCTTTTGGAT+TGG | + | chr6_4:28051807-28051826 | None:intergenic | 30.0% |
| GAAAGTCTCAAACATGATTT+GGG | + | chr6_4:28051992-28052011 | None:intergenic | 30.0% | |
| TGAAAGTCTCAAACATGATT+TGG | + | chr6_4:28051993-28052012 | None:intergenic | 30.0% | |
| !!! | TTTTGAAACAGGTATTGTGT+TGG | - | chr6_4:28052150-28052169 | Msa0984220:CDS | 30.0% |
| AAGTTCTTGTTCATAATCCA+AGG | + | chr6_4:28052374-28052393 | None:intergenic | 30.0% | |
| AAAAACTATGAACTTCCTGA+TGG | - | chr6_4:28052424-28052443 | Msa0984220:intron | 30.0% | |
| GATATCAGAAAAGATCTGTA+CGG | - | chr6_4:28052574-28052593 | Msa0984220:intron | 30.0% | |
| GACATCACATACATTATACA+TGG | + | chr6_4:28052810-28052829 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTGTTTTGCAGATG+TGG | - | chr6_4:28052857-28052876 | Msa0984220:intron | 30.0% |
| ! | TTACCATTATCGCATCATTT+TGG | + | chr6_4:28052945-28052964 | None:intergenic | 30.0% |
| !!! | ATGGTAAGTTATTTTTGCTG+TGG | - | chr6_4:28052958-28052977 | Msa0984220:intron | 30.0% |
| ! | GCTTGTATCGAGATATTTTA+CGG | - | chr6_4:28053237-28053256 | Msa0984220:intron | 30.0% |
| GATGAAAGAAAGGAAAAACA+TGG | - | chr6_4:28053482-28053501 | Msa0984220:five_prime_UTR | 30.0% | |
| AAATGGAAGATACTAGAGAG+AGG | + | chr6_4:28050353-28050372 | None:intergenic | 35.0% | |
| GATGAGTGACCGTAATAAAA+TGG | + | chr6_4:28050424-28050443 | None:intergenic | 35.0% | |
| ATTTATATTAGGGGAGAGAG+TGG | + | chr6_4:28050481-28050500 | None:intergenic | 35.0% | |
| !! | GAGAGGGGTATTTATATTAG+GGG | + | chr6_4:28050490-28050509 | None:intergenic | 35.0% |
| !! | GGAGAGGGGTATTTATATTA+GGG | + | chr6_4:28050491-28050510 | None:intergenic | 35.0% |
| GAGAGAAGAGGATTGAAAAT+GGG | + | chr6_4:28050512-28050531 | None:intergenic | 35.0% | |
| AGAGAGAAGAGGATTGAAAA+TGG | + | chr6_4:28050513-28050532 | None:intergenic | 35.0% | |
| ! | TGTTTGAAGTCTCTCTTTCT+CGG | + | chr6_4:28050557-28050576 | None:intergenic | 35.0% |
| ! | GTAACTGATTTAGTAGATCG+TGG | - | chr6_4:28050849-28050868 | Msa0984220:three_prime_UTR | 35.0% |
| ATTTAGTAGATCGTGGATAC+TGG | - | chr6_4:28050856-28050875 | Msa0984220:three_prime_UTR | 35.0% | |
| ! | GATCTTTTACATACTGGATC+TGG | - | chr6_4:28050940-28050959 | Msa0984220:exon | 35.0% |
| GGAATCTATTTGAACTGATC+TGG | - | chr6_4:28050961-28050980 | Msa0984220:CDS | 35.0% | |
| !!! | GGTTTTGTTGATTTGTTCAC+TGG | - | chr6_4:28051004-28051023 | Msa0984220:intron | 35.0% |
| !! | TCTTCAATTTGCTATGACTC+AGG | + | chr6_4:28051132-28051151 | None:intergenic | 35.0% |
| GAACTTAGAGTAGATAACTC+CGG | + | chr6_4:28051296-28051315 | None:intergenic | 35.0% | |
| AATTGGTTGAACTTCGTTTG+TGG | - | chr6_4:28051452-28051471 | Msa0984220:CDS | 35.0% | |
| AGTTCCATTGTCACAAACAA+GGG | + | chr6_4:28051561-28051580 | None:intergenic | 35.0% | |
| TTCATCTACAATTTGTGTGC+AGG | - | chr6_4:28051663-28051682 | Msa0984220:CDS | 35.0% | |
| ! | GAGAGTAAGAATACCTCTTT+TGG | + | chr6_4:28051812-28051831 | None:intergenic | 35.0% |
| !!! | TCTTTTCTCTATTGGCCTTT+GGG | + | chr6_4:28051966-28051985 | None:intergenic | 35.0% |
| !!! | ATCTTTTCTCTATTGGCCTT+TGG | + | chr6_4:28051967-28051986 | None:intergenic | 35.0% |
| ! | TTGGGTCATCTTTTCTCTAT+TGG | + | chr6_4:28051974-28051993 | None:intergenic | 35.0% |
| AAGATTGAGGGACAGAATAA+TGG | + | chr6_4:28052125-28052144 | None:intergenic | 35.0% | |
| ! | ATTGTGATAACTTGTCCATC+AGG | + | chr6_4:28052442-28052461 | None:intergenic | 35.0% |
| GATGGACAAGTTATCACAAT+TGG | - | chr6_4:28052442-28052461 | Msa0984220:intron | 35.0% | |
| ! | CTTTTCCAACCATCAATGAT+CGG | - | chr6_4:28052493-28052512 | Msa0984220:intron | 35.0% |
| ACACTTCATGATAGAGTTGT+AGG | + | chr6_4:28052548-28052567 | None:intergenic | 35.0% | |
| GTGATAAAATAATCACCTGC+TGG | + | chr6_4:28052771-28052790 | None:intergenic | 35.0% | |
| AGTCCAAAATGATGCGATAA+TGG | - | chr6_4:28052939-28052958 | Msa0984220:intron | 35.0% | |
| !!! | TTTTGCTGTGGTTGCTTTTT+TGG | - | chr6_4:28052970-28052989 | Msa0984220:intron | 35.0% |
| GTTATGGAACTATGTTGACA+TGG | - | chr6_4:28053005-28053024 | Msa0984220:intron | 35.0% | |
| ACTATGTTGACATGGATAAG+AGG | - | chr6_4:28053013-28053032 | Msa0984220:intron | 35.0% | |
| AAAATCTGAAAAAGGGCGAA+AGG | + | chr6_4:28053160-28053179 | None:intergenic | 35.0% | |
| CATAAACATGACGTTCCAAA+AGG | + | chr6_4:28053211-28053230 | None:intergenic | 35.0% | |
| TGGATCTACAGAATTATTCC+CGG | - | chr6_4:28053419-28053438 | Msa0984220:five_prime_UTR | 35.0% | |
| TACAGAATTATTCCCGGAAA+GGG | - | chr6_4:28053425-28053444 | Msa0984220:five_prime_UTR | 35.0% | |
| AGAGAGAGGAGAGAGAAATA+GGG | + | chr6_4:28050339-28050358 | None:intergenic | 40.0% | |
| TAGAGAGAGGAGAGAGAAAT+AGG | + | chr6_4:28050340-28050359 | None:intergenic | 40.0% | |
| !! | GGGAGAGGGGTATTTATATT+AGG | + | chr6_4:28050492-28050511 | None:intergenic | 40.0% |
| AGAGGATTGAAAATGGGAGA+GGG | + | chr6_4:28050506-28050525 | None:intergenic | 40.0% | |
| AAGAGGATTGAAAATGGGAG+AGG | + | chr6_4:28050507-28050526 | None:intergenic | 40.0% | |
| AGAGAAAATGGATCGAAGAG+GGG | + | chr6_4:28050598-28050617 | None:intergenic | 40.0% | |
| GAGAGAAAATGGATCGAAGA+GGG | + | chr6_4:28050599-28050618 | None:intergenic | 40.0% | |
| AGAGAGAAAATGGATCGAAG+AGG | + | chr6_4:28050600-28050619 | None:intergenic | 40.0% | |
| ! | CCATTTTCTCTCTACTCTCA+CGG | - | chr6_4:28050607-28050626 | Msa0984220:three_prime_UTR | 40.0% |
| GTTCCATTGTCACAAACAAG+GGG | + | chr6_4:28051560-28051579 | None:intergenic | 40.0% | |
| CAGTTCCATTGTCACAAACA+AGG | + | chr6_4:28051562-28051581 | None:intergenic | 40.0% | |
| CTTGTTTGTGACAATGGAAC+TGG | - | chr6_4:28051560-28051579 | Msa0984220:CDS | 40.0% | |
| TTGTGACAATGGAACTGGAA+TGG | - | chr6_4:28051565-28051584 | Msa0984220:CDS | 40.0% | |
| ! | GCTGTGTTTCCAAGTATTGT+TGG | - | chr6_4:28051715-28051734 | Msa0984220:intron | 40.0% |
| ! | ACAGGTATTGTGTTGGATTC+CGG | - | chr6_4:28052157-28052176 | Msa0984220:CDS | 40.0% |
| AGTGCATAACCCTCATAGAT+TGG | + | chr6_4:28052205-28052224 | None:intergenic | 40.0% | |
| GGAAATTGTCCGTGACATAA+AGG | - | chr6_4:28052330-28052349 | Msa0984220:CDS | 40.0% | |
| CAAGCTTCTCCTTTATGTCA+CGG | + | chr6_4:28052342-28052361 | None:intergenic | 40.0% | |
| TTATCACAATTGGAGCTGAG+AGG | - | chr6_4:28052452-28052471 | Msa0984220:intron | 40.0% | |
| ATGGTTGGAAAAGGACTTCT+GGG | + | chr6_4:28052486-28052505 | None:intergenic | 40.0% | |
| ! | CGATCATTGATGGTTGGAAA+AGG | + | chr6_4:28052495-28052514 | None:intergenic | 40.0% |
| CTTCATGATAGAGTTGTAGG+TGG | + | chr6_4:28052545-28052564 | None:intergenic | 40.0% | |
| CTCTATCATGAAGTGTGATG+TGG | - | chr6_4:28052552-28052571 | Msa0984220:intron | 40.0% | |
| TACGGCAACATTGTTCTTAG+TGG | - | chr6_4:28052592-28052611 | Msa0984220:intron | 40.0% | |
| TCCTAGCAGCATGAAGATTA+AGG | - | chr6_4:28052675-28052694 | Msa0984220:intron | 40.0% | |
| ACCTTAATCTTCATGCTGCT+AGG | + | chr6_4:28052679-28052698 | None:intergenic | 40.0% | |
| CAGCATGAAGATTAAGGTTG+TGG | - | chr6_4:28052681-28052700 | Msa0984220:intron | 40.0% | |
| ! | AGAAAGTACAGTGTGTGGAT+TGG | - | chr6_4:28052715-28052734 | Msa0984220:intron | 40.0% |
| TTTGCAGATGTGGATATCCA+AGG | - | chr6_4:28052867-28052886 | Msa0984220:intron | 40.0% | |
| TTGCAGATGTGGATATCCAA+GGG | - | chr6_4:28052868-28052887 | Msa0984220:intron | 40.0% | |
| ATTTCCTGTGGACAATGGAT+GGG | + | chr6_4:28052912-28052931 | None:intergenic | 40.0% | |
| ! | TTGGTGTCTCTGTCATGTTA+TGG | - | chr6_4:28052989-28053008 | Msa0984220:intron | 40.0% |
| ACATGGATAAGAGGTGAGAT+CGG | - | chr6_4:28053022-28053041 | Msa0984220:intron | 40.0% | |
| TCACAATCACTCCTTACTAC+AGG | + | chr6_4:28053116-28053135 | None:intergenic | 40.0% | |
| TTTACTACGCCTGATTTACG+TGG | - | chr6_4:28053399-28053418 | Msa0984220:five_prime_UTR | 40.0% | |
| TCTGTAGATCCACGTAAATC+AGG | + | chr6_4:28053411-28053430 | None:intergenic | 40.0% | |
| CTACAGAATTATTCCCGGAA+AGG | - | chr6_4:28053424-28053443 | Msa0984220:five_prime_UTR | 40.0% | |
| GAGGATTGAAAATGGGAGAG+GGG | + | chr6_4:28050505-28050524 | None:intergenic | 45.0% | |
| GGTGAGAAATGAGAGAGAAG+AGG | + | chr6_4:28050524-28050543 | None:intergenic | 45.0% | |
| CCGTGAGAGTAGAGAGAAAA+TGG | + | chr6_4:28050610-28050629 | None:intergenic | 45.0% | |
| CAGATCACAGATCAGTGACT+AGG | + | chr6_4:28050885-28050904 | None:intergenic | 45.0% | |
| CTAGTCACTGATCTGTGATC+TGG | - | chr6_4:28050883-28050902 | Msa0984220:three_prime_UTR | 45.0% | |
| ! | CAACCCCTTGTTTGTGACAA+TGG | - | chr6_4:28051554-28051573 | Msa0984220:CDS | 45.0% |
| CAATGGAACTGGAATGGTGA+AGG | - | chr6_4:28051571-28051590 | Msa0984220:CDS | 45.0% | |
| TCTACAATTTGTGTGCAGGC+TGG | - | chr6_4:28051667-28051686 | Msa0984220:CDS | 45.0% | |
| ATACTTGGAAACACAGCCCT+AGG | + | chr6_4:28051712-28051731 | None:intergenic | 45.0% | |
| !! | TACTGGTGTCATGGTTGGTA+TGG | - | chr6_4:28051750-28051769 | Msa0984220:intron | 45.0% |
| !! | ACTGGTGTCATGGTTGGTAT+GGG | - | chr6_4:28051751-28051770 | Msa0984220:intron | 45.0% |
| ! | CATGGTTGGTATGGGTCAAA+AGG | - | chr6_4:28051759-28051778 | Msa0984220:intron | 45.0% |
| GGTCAAAAGGATGCCTATGT+TGG | - | chr6_4:28051772-28051791 | Msa0984220:intron | 45.0% | |
| TGACAATACCGTGCTCAATG+GGG | + | chr6_4:28051840-28051859 | None:intergenic | 45.0% | |
| CTGACAATACCGTGCTCAAT+GGG | + | chr6_4:28051841-28051860 | None:intergenic | 45.0% | |
| ACTGACAATACCGTGCTCAA+TGG | + | chr6_4:28051842-28051861 | None:intergenic | 45.0% | |
| AGCACGGTATTGTCAGTAAC+TGG | - | chr6_4:28051845-28051864 | Msa0984220:CDS | 45.0% | |
| GCACGGTATTGTCAGTAACT+GGG | - | chr6_4:28051846-28051865 | Msa0984220:CDS | 45.0% | |
| TGTCAGTAACTGGGATGACA+TGG | - | chr6_4:28051855-28051874 | Msa0984220:CDS | 45.0% | |
| !! | CTATTGGCCTTTGGGTTAAG+TGG | + | chr6_4:28051958-28051977 | None:intergenic | 45.0% |
| TGTACGACCACTTGCATAGA+GGG | + | chr6_4:28052055-28052074 | None:intergenic | 45.0% | |
| TTGTACGACCACTTGCATAG+AGG | + | chr6_4:28052056-28052075 | None:intergenic | 45.0% | |
| TATGCAAGTGGTCGTACAAC+TGG | - | chr6_4:28052057-28052076 | Msa0984220:CDS | 45.0% | |
| TCACACTGTGCCAATCTATG+AGG | - | chr6_4:28052192-28052211 | Msa0984220:intron | 45.0% | |
| CACACTGTGCCAATCTATGA+GGG | - | chr6_4:28052193-28052212 | Msa0984220:intron | 45.0% | |
| CCAAACGAAGGATAGCATGT+GGG | + | chr6_4:28052228-28052247 | None:intergenic | 45.0% | |
| TCCAAACGAAGGATAGCATG+TGG | + | chr6_4:28052229-28052248 | None:intergenic | 45.0% | |
| ATCCTTCGTTTGGATCTTGC+TGG | - | chr6_4:28052235-28052254 | Msa0984220:intron | 45.0% | |
| ATGAAGATCCTCACTGAGAG+AGG | - | chr6_4:28052280-28052299 | Msa0984220:intron | 45.0% | |
| TGAAGATCCTCACTGAGAGA+GGG | - | chr6_4:28052281-28052300 | Msa0984220:intron | 45.0% | |
| GAAGCTTGCATATGTTGCCT+TGG | - | chr6_4:28052354-28052373 | Msa0984220:intron | 45.0% | |
| GATGGTTGGAAAAGGACTTC+TGG | + | chr6_4:28052487-28052506 | None:intergenic | 45.0% | |
| ! | CCATTCCGATCATTGATGGT+TGG | + | chr6_4:28052501-28052520 | None:intergenic | 45.0% |
| CCAACCATCAATGATCGGAA+TGG | - | chr6_4:28052498-28052517 | Msa0984220:intron | 45.0% | |
| GCTTCCATTCCGATCATTGA+TGG | + | chr6_4:28052505-28052524 | None:intergenic | 45.0% | |
| GGCAACATTGTTCTTAGTGG+TGG | - | chr6_4:28052595-28052614 | Msa0984220:intron | 45.0% | |
| GGTGGTTCAACTATGTTTCC+TGG | - | chr6_4:28052613-28052632 | Msa0984220:intron | 45.0% | |
| TATTGCTGACCGTATGAGCA+AGG | - | chr6_4:28052636-28052655 | Msa0984220:intron | 45.0% | |
| CAGTGATCTCCTTGCTCATA+CGG | + | chr6_4:28052648-28052667 | None:intergenic | 45.0% | |
| ACACTGTACTTTCTCTCTGG+TGG | + | chr6_4:28052709-28052728 | None:intergenic | 45.0% | |
| CACACACTGTACTTTCTCTC+TGG | + | chr6_4:28052712-28052731 | None:intergenic | 45.0% | |
| ! | CAGAGAGAAAGTACAGTGTG+TGG | - | chr6_4:28052710-28052729 | Msa0984220:intron | 45.0% |
| !! | AAGTACAGTGTGTGGATTGG+AGG | - | chr6_4:28052718-28052737 | Msa0984220:intron | 45.0% |
| !! | GGAAAGTACTGAGAGAAGCA+AGG | + | chr6_4:28052750-28052769 | None:intergenic | 45.0% |
| TTCTCTCAGTACTTTCCAGC+AGG | - | chr6_4:28052753-28052772 | Msa0984220:intron | 45.0% | |
| AGACTCGTCATATTCACCCT+TGG | + | chr6_4:28052887-28052906 | None:intergenic | 45.0% | |
| AAGGGTGAATATGACGAGTC+TGG | - | chr6_4:28052886-28052905 | Msa0984220:intron | 45.0% | |
| CATTTCCTGTGGACAATGGA+TGG | + | chr6_4:28052913-28052932 | None:intergenic | 45.0% | |
| ! | GAAGCATTTCCTGTGGACAA+TGG | + | chr6_4:28052917-28052936 | None:intergenic | 45.0% |
| !! | GGACTTAGAAGCATTTCCTG+TGG | + | chr6_4:28052924-28052943 | None:intergenic | 45.0% |
| !! | TAGGTTGGTTGCCTGTAGTA+AGG | - | chr6_4:28053102-28053121 | Msa0984220:intron | 45.0% |
| TGCTTCTATGCATCGCATCA+TGG | - | chr6_4:28053333-28053352 | Msa0984220:five_prime_UTR | 45.0% | |
| ! | AAATTTGAGATCGGGCAACC+AGG | + | chr6_4:28053454-28053473 | None:intergenic | 45.0% |
| !!! | ATTTTAATTCTTTTAAAAAT+TGG | + | chr6_4:28053359-28053378 | None:intergenic | 5.0% |
| GTGGGTTTAGGTGTGGTTGT+GGG | + | chr6_4:28050457-28050476 | None:intergenic | 50.0% | |
| GCAAAAGATGGCAGATGCTG+AGG | - | chr6_4:28051526-28051545 | Msa0984220:CDS | 50.0% | |
| ! | TTGCTGGTGATGATGCTCCT+AGG | - | chr6_4:28051692-28051711 | Msa0984220:CDS | 50.0% |
| ! | TGCTGGTGATGATGCTCCTA+GGG | - | chr6_4:28051693-28051712 | Msa0984220:CDS | 50.0% |
| TGACACCAGTATGACGAGGT+CGG | + | chr6_4:28051741-28051760 | None:intergenic | 50.0% | |
| ! | ACCTCGTCATACTGGTGTCA+TGG | - | chr6_4:28051741-28051760 | Msa0984220:intron | 50.0% |
| ACCATGACACCAGTATGACG+AGG | + | chr6_4:28051745-28051764 | None:intergenic | 50.0% | |
| !! | CGTCATACTGGTGTCATGGT+TGG | - | chr6_4:28051745-28051764 | Msa0984220:intron | 50.0% |
| TTGGGCTTCGTCACCAACAT+AGG | + | chr6_4:28051788-28051807 | None:intergenic | 50.0% | |
| GACGAAGCCCAATCCAAAAG+AGG | - | chr6_4:28051796-28051815 | Msa0984220:intron | 50.0% | |
| CTCAAGTACCCCATTGAGCA+CGG | - | chr6_4:28051829-28051848 | Msa0984220:CDS | 50.0% | |
| GGGATGACATGGAGAAGATC+TGG | - | chr6_4:28051866-28051885 | Msa0984220:CDS | 50.0% | |
| !! | GAGCCTCAGTTAGAAGCACT+GGG | + | chr6_4:28051936-28051955 | None:intergenic | 50.0% |
| TGAGGCTCCACTTAACCCAA+AGG | - | chr6_4:28051948-28051967 | Msa0984220:CDS | 50.0% | |
| ATTGTGTTGGATTCCGGCGA+TGG | - | chr6_4:28052163-28052182 | Msa0984220:CDS | 50.0% | |
| CCCACATGCTATCCTTCGTT+TGG | - | chr6_4:28052225-28052244 | Msa0984220:intron | 50.0% | |
| GACCAGCAAGATCCAAACGA+AGG | + | chr6_4:28052240-28052259 | None:intergenic | 50.0% | |
| ACATGTACCCTCTCTCAGTG+AGG | + | chr6_4:28052291-28052310 | None:intergenic | 50.0% | |
| GGAAAAGGACTTCTGGGCAA+CGG | + | chr6_4:28052480-28052499 | None:intergenic | 50.0% | |
| ATGATCGGAATGGAAGCTGC+TGG | - | chr6_4:28052508-28052527 | Msa0984220:intron | 50.0% | |
| CTCATACGGTCAGCAATACC+AGG | + | chr6_4:28052634-28052653 | None:intergenic | 50.0% | |
| TGGATAAGAGGTGAGATCGG+AGG | - | chr6_4:28053025-28053044 | Msa0984220:intron | 50.0% | |
| GGATAAGAGGTGAGATCGGA+GGG | - | chr6_4:28053026-28053045 | Msa0984220:intron | 50.0% | |
| CCAACCTACAGACATCCAGT+GGG | + | chr6_4:28053090-28053109 | None:intergenic | 50.0% | |
| ACCAACCTACAGACATCCAG+TGG | + | chr6_4:28053091-28053110 | None:intergenic | 50.0% | |
| CGTGGGTTTAGGTGTGGTTG+TGG | + | chr6_4:28050458-28050477 | None:intergenic | 55.0% | |
| ATTAGGGGAGAGAGTGGCGT+GGG | + | chr6_4:28050475-28050494 | None:intergenic | 55.0% | |
| TATTAGGGGAGAGAGTGGCG+TGG | + | chr6_4:28050476-28050495 | None:intergenic | 55.0% | |
| CTCTTTCTCGGCGAGAAGTG+TGG | + | chr6_4:28050545-28050564 | None:intergenic | 55.0% | |
| TGTGTGCAGGCTGGATTTGC+TGG | - | chr6_4:28051676-28051695 | Msa0984220:CDS | 55.0% | |
| CGAGGTCGGCCAACAATACT+TGG | + | chr6_4:28051727-28051746 | None:intergenic | 55.0% | |
| !! | AGAAGCACTGGGTGCTCTTC+AGG | + | chr6_4:28051925-28051944 | None:intergenic | 55.0% |
| GCACCCAGTGCTTCTAACTG+AGG | - | chr6_4:28051930-28051949 | Msa0984220:CDS | 55.0% | |
| ! | GGAGCCTCAGTTAGAAGCAC+TGG | + | chr6_4:28051937-28051956 | None:intergenic | 55.0% |
| CAATGTGCCCGCCATGTATG+TGG | - | chr6_4:28052011-28052030 | Msa0984220:CDS | 55.0% | |
| TGGATGGCCACATACATGGC+GGG | + | chr6_4:28052021-28052040 | None:intergenic | 55.0% | |
| CTGGATGGCCACATACATGG+CGG | + | chr6_4:28052022-28052041 | None:intergenic | 55.0% | |
| AGCCTGGATGGCCACATACA+TGG | + | chr6_4:28052025-28052044 | None:intergenic | 55.0% | |
| GTCCTCTCCCTCTATGCAAG+TGG | - | chr6_4:28052045-28052064 | Msa0984220:CDS | 55.0% | |
| GACCACTTGCATAGAGGGAG+AGG | + | chr6_4:28052050-28052069 | None:intergenic | 55.0% | |
| AGTGTGACTCACACCATCGC+CGG | + | chr6_4:28052179-28052198 | None:intergenic | 55.0% | |
| TGTTCACCACCTCAGCTGAG+CGG | - | chr6_4:28052308-28052327 | Msa0984220:CDS | 55.0% | |
| AATTTCCCGCTCAGCTGAGG+TGG | + | chr6_4:28052317-28052336 | None:intergenic | 55.0% | |
| GACAATTTCCCGCTCAGCTG+AGG | + | chr6_4:28052320-28052339 | None:intergenic | 55.0% | |
| CTTCATGCTGCTAGGAGCCA+GGG | + | chr6_4:28052671-28052690 | None:intergenic | 55.0% | |
| TCTTCATGCTGCTAGGAGCC+AGG | + | chr6_4:28052672-28052691 | None:intergenic | 55.0% | |
| AATGTTCTGTGGCAGCCCAC+TGG | - | chr6_4:28053072-28053091 | Msa0984220:intron | 55.0% | |
| CCCACTGGATGTCTGTAGGT+TGG | - | chr6_4:28053087-28053106 | Msa0984220:intron | 55.0% | |
| TATTCCCGGAAAGGGTTGCC+TGG | - | chr6_4:28053433-28053452 | Msa0984220:five_prime_UTR | 55.0% | |
| GAGTGGCGTGGGTTTAGGTG+TGG | + | chr6_4:28050464-28050483 | None:intergenic | 60.0% | |
| GGAGAGAGTGGCGTGGGTTT+AGG | + | chr6_4:28050469-28050488 | None:intergenic | 60.0% | |
| GTTGGCCGACCTCGTCATAC+TGG | - | chr6_4:28051733-28051752 | Msa0984220:intron | 60.0% | |
| CGCCATGTATGTGGCCATCC+AGG | - | chr6_4:28052020-28052039 | Msa0984220:CDS | 60.0% | |
| CATAGAGGGAGAGGACAGCC+TGG | + | chr6_4:28052041-28052060 | None:intergenic | 60.0% | |
| GTTCACCACCTCAGCTGAGC+GGG | - | chr6_4:28052309-28052328 | Msa0984220:CDS | 60.0% | |
| GAGCAAGGAGATCACTGCCC+TGG | - | chr6_4:28052651-28052670 | Msa0984220:intron | 60.0% | |
| CTGGCCCATCCATTGTCCAC+AGG | - | chr6_4:28052905-28052924 | Msa0984220:intron | 60.0% | |
| GCAGCCCACTGGATGTCTGT+AGG | - | chr6_4:28053083-28053102 | Msa0984220:intron | 60.0% | |
| GCAACCAGGCAACCCTTTCC+GGG | + | chr6_4:28053440-28053459 | None:intergenic | 60.0% | |
| GGCAACCAGGCAACCCTTTC+CGG | + | chr6_4:28053441-28053460 | None:intergenic | 60.0% | |
| GAGGGAGAGGACAGCCTGGA+TGG | + | chr6_4:28052037-28052056 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 28050319 | 28053568 | 28050319 | ID=Msa0984220;Name=Msa0984220 |
| chr6_4 | mRNA | 28050319 | 28053568 | 28050319 | ID=Msa0984220-mRNA-1;Parent=Msa0984220;Name=Msa0984220-mRNA-1;_AED=0.04;_eAED=0.04;_QI=316|1|1|1|0.75|0.8|5|629|377 |
| chr6_4 | exon | 28050319 | 28051013 | 28050319 | ID=Msa0984220-mRNA-1:exon:7933;Parent=Msa0984220-mRNA-1 |
| chr6_4 | exon | 28051113 | 28051726 | 28051113 | ID=Msa0984220-mRNA-1:exon:7932;Parent=Msa0984220-mRNA-1 |
| chr6_4 | exon | 28051809 | 28052202 | 28051809 | ID=Msa0984220-mRNA-1:exon:7931;Parent=Msa0984220-mRNA-1 |
| chr6_4 | exon | 28052295 | 28052360 | 28052295 | ID=Msa0984220-mRNA-1:exon:7930;Parent=Msa0984220-mRNA-1 |
| chr6_4 | exon | 28053259 | 28053568 | 28053259 | ID=Msa0984220-mRNA-1:exon:7929;Parent=Msa0984220-mRNA-1 |
| chr6_4 | five_prime_UTR | 28053259 | 28053568 | 28053259 | ID=Msa0984220-mRNA-1:five_prime_utr;Parent=Msa0984220-mRNA-1 |
| chr6_4 | five_prime_UTR | 28052355 | 28052360 | 28052355 | ID=Msa0984220-mRNA-1:five_prime_utr;Parent=Msa0984220-mRNA-1 |
| chr6_4 | CDS | 28052295 | 28052354 | 28052295 | ID=Msa0984220-mRNA-1:cds;Parent=Msa0984220-mRNA-1 |
| chr6_4 | CDS | 28051809 | 28052202 | 28051809 | ID=Msa0984220-mRNA-1:cds;Parent=Msa0984220-mRNA-1 |
| chr6_4 | CDS | 28051113 | 28051726 | 28051113 | ID=Msa0984220-mRNA-1:cds;Parent=Msa0984220-mRNA-1 |
| chr6_4 | CDS | 28050948 | 28051013 | 28050948 | ID=Msa0984220-mRNA-1:cds;Parent=Msa0984220-mRNA-1 |
| chr6_4 | three_prime_UTR | 28050319 | 28050947 | 28050319 | ID=Msa0984220-mRNA-1:three_prime_utr;Parent=Msa0984220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
