AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1404300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1404300 MtrunA17_Chr4g0070881 98.234 453 8 0 1 453 842 1294 0.0 912
Msa1404300 MtrunA17_Chr2g0299971 66.588 422 119 8 35 453 870 1272 6.66e-173 518
Msa1404300 MtrunA17_Chr4g0026411 35.831 427 251 9 37 453 823 1236 8.60e-59 208
Msa1404300 MtrunA17_Chr1g0210751 33.174 419 229 11 42 447 774 1154 1.77e-42 160
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1404300 AT2G19390.1 46.495 428 166 15 34 451 835 1209 1.02e-91 302
Msa1404300 AT2G19390.2 46.495 428 166 15 34 451 835 1209 1.02e-91 302
Msa1404300 AT4G29790.1 44.978 458 193 15 4 453 805 1211 1.95e-83 279
Msa1404300 AT5G22450.3 28.054 442 220 12 10 447 803 1150 6.99e-29 120
Msa1404300 AT5G22450.1 28.054 442 220 12 10 447 803 1150 6.99e-29 120
Msa1404300 AT5G22450.2 28.054 442 220 12 10 447 803 1150 6.99e-29 120

Find 147 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATTGATATTCCTAATTT+TGG 0.048782 tig0023052:-95058 Msa1404300:CDS
ATCACCAATTTCTCAGAATT+TGG 0.102188 tig0023052:-92972 Msa1404300:CDS
TCCTCTTCTTGCACCATTTC+AGG 0.145762 tig0023052:+94708 None:intergenic
ACAAGATCATGACGACTTTA+TGG 0.158734 tig0023052:-92351 Msa1404300:CDS
AATAATGGTTATGGAATTAT+TGG 0.182048 tig0023052:-95106 Msa1404300:five_prime_UTR
CAGCATTCTGTTTCTGTAAA+TGG 0.184712 tig0023052:-92614 Msa1404300:CDS
CTGCACTGGCATTTGTTAAA+TGG 0.200481 tig0023052:-93378 Msa1404300:CDS
CTTGGATTCAACCCAAAATT+AGG 0.210889 tig0023052:+95046 None:intergenic
TACTTTGTTTCCTTTGTTAT+TGG 0.242515 tig0023052:+92245 None:intergenic
AGCTTTGGCAACTCAATAAA+TGG 0.245736 tig0023052:-95025 Msa1404300:CDS
TTATCCAAATTCTGAGAAAT+TGG 0.253548 tig0023052:+92968 None:intergenic
CCAGTGGAAATGAAGATTTC+TGG 0.257550 tig0023052:-92889 Msa1404300:CDS
GGCTAATTCTGTCTACAATT+AGG 0.264046 tig0023052:-92185 Msa1404300:three_prime_UTR
ATTAGGTTATATAGATTCTT+TGG 0.269160 tig0023052:-92168 Msa1404300:three_prime_UTR
ACAGAAGGCAATGCCGGTTT+TGG 0.292405 tig0023052:+92566 None:intergenic
TCTTCTCATTCTGCTAATAA+TGG 0.307707 tig0023052:-95121 Msa1404300:five_prime_UTR
TCTTGCCTGTATCTTCAAAT+TGG 0.314315 tig0023052:+93338 None:intergenic
CATTCTGCTAATAATGGTTA+TGG 0.321303 tig0023052:-95115 Msa1404300:five_prime_UTR
CTTCCCAGCATAGCATTGTT+AGG 0.322216 tig0023052:-93270 Msa1404300:CDS
TGAGTTTGGCTTGGGTGGAT+TGG 0.336747 tig0023052:-92495 Msa1404300:CDS
ATGAAGATTTCTGGTCAAAC+AGG 0.340365 tig0023052:-92880 Msa1404300:CDS
CAAGATCATGACGACTTTAT+GGG 0.350066 tig0023052:-92350 Msa1404300:CDS
GCTGACAATGGTCAAGATCT+TGG 0.352016 tig0023052:-92404 Msa1404300:CDS
ACCAAGGAAAAGGATGAGTT+TGG 0.375412 tig0023052:-92509 Msa1404300:CDS
ATAAAACCATCCTATGTAAC+TGG 0.376313 tig0023052:+92208 None:intergenic
AGGAACAAATCCTTGAATAA+AGG 0.379871 tig0023052:+93301 None:intergenic
TGCTGAGTTGCTTTCTGCTT+AGG 0.385023 tig0023052:+92632 None:intergenic
CTATTGGAGCTTCAAAGTAT+TGG 0.387033 tig0023052:-94920 Msa1404300:CDS
TTTCTGCTTAGGCTTTGTTT+TGG 0.400504 tig0023052:+92643 None:intergenic
TATAAATGATAAGCTTCTAT+TGG 0.401761 tig0023052:-94936 Msa1404300:CDS
TCGCCGAGCACGTCCATTCC+AGG 0.402237 tig0023052:+92440 None:intergenic
TTTCAGCGAGCCTTTATTCA+AGG 0.402477 tig0023052:-93311 Msa1404300:CDS
AATTGTTCCTTGATGATGTC+GGG 0.405983 tig0023052:-92844 Msa1404300:CDS
CCTAGTAATATCCTCCGATA+TGG 0.406751 tig0023052:+94680 None:intergenic
TTTCTTCTTATAGCCTGAAA+TGG 0.408158 tig0023052:-94721 Msa1404300:intron
GATAATGAATCTGAGCTTGA+TGG 0.412037 tig0023052:-95196 Msa1404300:five_prime_UTR
TTTGGGTTGAATCCAAGCTT+TGG 0.416009 tig0023052:-95040 Msa1404300:CDS
ATATGCTTCTCCTCTGTCTC+TGG 0.416454 tig0023052:-93212 Msa1404300:CDS
GTTTCTGTAAATGGCCTCCT+TGG 0.419865 tig0023052:-92605 Msa1404300:CDS
ATTTCCTAACAATGCTATGC+TGG 0.420888 tig0023052:+93266 None:intergenic
ATAATGGTTATGGAATTATT+GGG 0.423024 tig0023052:-95105 Msa1404300:five_prime_UTR
ATGGTCAAGATCTTGGTTCA+TGG 0.428019 tig0023052:-92397 Msa1404300:CDS
AAATTCAAGCAATAACAAAA+TGG 0.433171 tig0023052:-93410 Msa1404300:CDS
TGCCTGTATCTTCAAATTGG+TGG 0.435626 tig0023052:+93341 None:intergenic
TTTATTGAGTTGCCAAAGCT+TGG 0.436808 tig0023052:+95028 None:intergenic
ATTGTATTGCAACTCTGAAC+AGG 0.438724 tig0023052:+94967 None:intergenic
TTTCTTTCTGCAGCTTCCAT+GGG 0.442842 tig0023052:-93010 Msa1404300:intron
TTGTCCAACCTCCAGCTGCC+TGG 0.442909 tig0023052:-92458 Msa1404300:CDS
AAGGATGAGTTTGGCTTGGG+TGG 0.443057 tig0023052:-92500 Msa1404300:CDS
CCTTTCAGACTTGAATATGA+TGG 0.446037 tig0023052:-92306 Msa1404300:CDS
CCAGAAATCTTCATTTCCAC+TGG 0.447790 tig0023052:+92889 None:intergenic
TTATGGAATTATTGGGAAAC+CGG 0.455569 tig0023052:-95098 Msa1404300:five_prime_UTR
AGGAGCGAGAGGGAGAGAGA+TGG 0.457279 tig0023052:-92755 Msa1404300:CDS
GTTGCCAGAGCAACCAAAAC+CGG 0.459106 tig0023052:-92579 Msa1404300:CDS
TGTTAGGAAATCAGATGGAT+TGG 0.459381 tig0023052:-93254 Msa1404300:CDS
TCGGAGGATATTACTAGGTT+AGG 0.460701 tig0023052:-94675 Msa1404300:CDS
AATTCAAGTACTCCGGGGAT+TGG 0.461777 tig0023052:-92809 Msa1404300:CDS
CAAAAGGAAAGAGGAGCGAG+AGG 0.466844 tig0023052:-92766 Msa1404300:CDS
ATGGACGTGCTCGGCGATCC+CGG 0.467302 tig0023052:-92434 Msa1404300:CDS
GAAAAGGATGAGTTTGGCTT+GGG 0.468195 tig0023052:-92503 Msa1404300:CDS
TCTCTAACAAGCAGCACAAA+AGG 0.470247 tig0023052:-92782 Msa1404300:CDS
GCACGTCCATTCCAGGCAGC+TGG 0.471918 tig0023052:+92447 None:intergenic
CTGTCTCTGGAAGCAACACC+AGG 0.473593 tig0023052:-93199 Msa1404300:intron
GGAAAAGGATGAGTTTGGCT+TGG 0.474081 tig0023052:-92504 Msa1404300:CDS
CCATATCGGAGGATATTACT+AGG 0.476716 tig0023052:-94680 Msa1404300:CDS
AATGGTCAAGCAAGCTGCAC+TGG 0.477784 tig0023052:-93392 Msa1404300:CDS
CAACCTCCAGCTGCCTGGAA+TGG 0.478670 tig0023052:-92453 Msa1404300:CDS
GTAAGCTTACCACTGATTCA+AGG 0.479044 tig0023052:+94891 None:intergenic
GCATCAATTGTACCTGTCCT+TGG 0.479173 tig0023052:+94643 None:intergenic
TGGAGGTTGGACAAATCAAT+TGG 0.482080 tig0023052:+92467 None:intergenic
TACCACCAATTTGAAGATAC+AGG 0.482843 tig0023052:-93343 Msa1404300:CDS
CAAGCATCATCAAGTGCTAA+AGG 0.485119 tig0023052:-92677 Msa1404300:CDS
AGAGTTGCAATACAATAGCT+TGG 0.485205 tig0023052:-94960 Msa1404300:CDS
GAGTTGCAATACAATAGCTT+GGG 0.485947 tig0023052:-94959 Msa1404300:CDS
AGAGACAGAGGAGAAGCATA+TGG 0.488395 tig0023052:+93214 None:intergenic
TGAGAAATTGGTGATGGGCT+CGG 0.489386 tig0023052:+92980 None:intergenic
AGAAGAGGATGAAGCCATAT+CGG 0.489438 tig0023052:-94694 Msa1404300:CDS
CAAGGTAATTCAAGTACTCC+GGG 0.491280 tig0023052:-92815 Msa1404300:CDS
GTTGCTCTGGCAACTTGCCA+AGG 0.495656 tig0023052:+92588 None:intergenic
GGCATTTGTTAAATGGACAT+TGG 0.499248 tig0023052:-93371 Msa1404300:CDS
TATGCTGGGAAGAAGCAGTT+AGG 0.500503 tig0023052:+93281 None:intergenic
TCAGATGAATTATTTAAAGC+AGG 0.502277 tig0023052:+92917 None:intergenic
TTATAGAAATACCAAGGAAA+AGG 0.504891 tig0023052:-92519 Msa1404300:CDS
TCGGTAGACTTTGAAACAGA+AGG 0.506526 tig0023052:+92551 None:intergenic
CGAGAGGGAGAGAGATGGAA+AGG 0.506934 tig0023052:-92750 Msa1404300:CDS
ACTGAAAATTAGATAGTGAA+TGG 0.507055 tig0023052:+95146 None:intergenic
AGAAATGGAACTACAAAAGC+TGG 0.507275 tig0023052:-92704 Msa1404300:CDS
ACCATTGTCAGCAAGGTCAC+CGG 0.507791 tig0023052:+92415 None:intergenic
TTTGAAACAGAAGGCAATGC+CGG 0.509002 tig0023052:+92560 None:intergenic
CAAGTCTGAAAGGTCATCCA+TGG 0.510398 tig0023052:+92316 None:intergenic
TCCTTGGTATTTCTATAACT+AGG 0.512532 tig0023052:+92524 None:intergenic
TATGTTAGAAAACATTACTC+TGG 0.512782 tig0023052:-92014 Msa1404300:three_prime_UTR
CGTCACTCGAAAACAACACT+TGG 0.514317 tig0023052:+92132 None:intergenic
GAATTGTTCCTTGATGATGT+CGG 0.517234 tig0023052:-92845 Msa1404300:CDS
CATTCCAGGCAGCTGGAGGT+TGG 0.519582 tig0023052:+92454 None:intergenic
AAATAACCAGTTACATAGGA+TGG 0.529556 tig0023052:-92214 Msa1404300:three_prime_UTR
TCAAGGTAATTCAAGTACTC+CGG 0.529755 tig0023052:-92816 Msa1404300:CDS
AAATTCTGAGAAATTGGTGA+TGG 0.530581 tig0023052:+92974 None:intergenic
GGTCATCCATGGGAATTTCA+AGG 0.531070 tig0023052:+92327 None:intergenic
TTTGTAGTTCCATTTCTGGA+TGG 0.532261 tig0023052:+92710 None:intergenic
TAGGAAATCAGATGGATTGG+AGG 0.537127 tig0023052:-93251 Msa1404300:CDS
AGAGAGGTACCATCCAGAAA+TGG 0.539063 tig0023052:-92719 Msa1404300:CDS
GAAGAAATAACCAGTTACAT+AGG 0.540275 tig0023052:-92218 Msa1404300:three_prime_UTR
TAAAGCATTAATGTCTAGCT+TGG 0.543499 tig0023052:-94990 Msa1404300:CDS
GATGGAGAATTAGAATTGAG+TGG 0.544477 tig0023052:-95178 Msa1404300:five_prime_UTR
CAAGCAGCACAAAAGGAAAG+AGG 0.548714 tig0023052:-92775 Msa1404300:CDS
GTTAGAGAACTTCCAATCCC+CGG 0.552035 tig0023052:+92797 None:intergenic
GAGAGGGAGAGAGATGGAAA+GGG 0.553581 tig0023052:-92749 Msa1404300:CDS
CCATTGTCAGCAAGGTCACC+GGG 0.558829 tig0023052:+92416 None:intergenic
ATATCACTTTCATCATGTGC+CGG 0.560029 tig0023052:+95079 None:intergenic
TTTCCTAACAATGCTATGCT+GGG 0.562049 tig0023052:+93267 None:intergenic
AGCATTGTTAGGAAATCAGA+TGG 0.566367 tig0023052:-93259 Msa1404300:CDS
CCATCATATTCAAGTCTGAA+AGG 0.568785 tig0023052:+92306 None:intergenic
CTGCCTGGAATGGACGTGCT+CGG 0.571271 tig0023052:-92443 Msa1404300:CDS
AGGCGAGCTTTACCAAGGAC+AGG 0.572551 tig0023052:-94655 Msa1404300:intron
CCCGGTGACCTTGCTGACAA+TGG 0.573635 tig0023052:-92416 Msa1404300:CDS
TATGGGCCTTGAAATTCCCA+TGG 0.577062 tig0023052:-92333 Msa1404300:CDS
CATAAGCTGTCACAACAAGT+TGG 0.581811 tig0023052:+94235 None:intergenic
CTCTTACAAATCAGAGAACA+AGG 0.582091 tig0023052:-91985 Msa1404300:three_prime_UTR
GAGAGAGATGGAAAGGGACA+CGG 0.582678 tig0023052:-92743 Msa1404300:CDS
TGGACTTGACCTTGAATCAG+TGG 0.585412 tig0023052:-94900 Msa1404300:intron
GATCTTGACCATTGTCAGCA+AGG 0.589061 tig0023052:+92408 None:intergenic
CGTCCATTCCAGGCAGCTGG+AGG 0.592370 tig0023052:+92450 None:intergenic
GCCTGAAATGGTGCAAGAAG+AGG 0.597062 tig0023052:-94709 Msa1404300:CDS
TGGGCTCGGCTGTGAACCCA+TGG 0.602595 tig0023052:+92994 None:intergenic
CATTATTATACCAATAACAA+AGG 0.603194 tig0023052:-92255 Msa1404300:three_prime_UTR
AAAAGGAAAGAGGAGCGAGA+GGG 0.603232 tig0023052:-92765 Msa1404300:CDS
AATTCTGAGAAATTGGTGAT+GGG 0.605189 tig0023052:+92975 None:intergenic
GCTCTGGCAACTTGCCAAGG+AGG 0.609512 tig0023052:+92591 None:intergenic
GCTATAAGTCGTTGACAGAG+AGG 0.616818 tig0023052:+95280 None:intergenic
TCAGAAGAAGATCGTAGCGG+TGG 0.617335 tig0023052:-95247 Msa1404300:five_prime_UTR
ATTGTTCCTTGATGATGTCG+GGG 0.617816 tig0023052:-92843 Msa1404300:CDS
GCTTGTCGAGGTGCATCGAG+TGG 0.617837 tig0023052:-93436 Msa1404300:CDS
ATTAATTGACAGGCTTGTCG+AGG 0.619306 tig0023052:-93448 Msa1404300:intron
AAGTCTGAAAGGTCATCCAT+GGG 0.626836 tig0023052:+92317 None:intergenic
AATTCATCTGAGCAAACCAG+TGG 0.638610 tig0023052:-92905 Msa1404300:CDS
TGAAGATTTCTGGTCAAACA+GGG 0.639834 tig0023052:-92879 Msa1404300:CDS
AGAGGATGAAGCCATATCGG+AGG 0.640561 tig0023052:-94691 Msa1404300:CDS
GCCTAGTTATAGAAATACCA+AGG 0.648008 tig0023052:-92525 Msa1404300:CDS
TGGTTGAATATTGATGACGA+TGG 0.648043 tig0023052:-92377 Msa1404300:CDS
TTGTTCCTTGATGATGTCGG+GGG 0.666945 tig0023052:-92842 Msa1404300:CDS
AGGTTAGGCGAGCTTTACCA+AGG 0.670077 tig0023052:-94660 Msa1404300:CDS
GGTGTTGCTTCCAGAGACAG+AGG 0.671711 tig0023052:+93202 None:intergenic
TGGAAAGGGACACGGCAGAG+AGG 0.726991 tig0023052:-92735 Msa1404300:CDS
GACAGCTTATGAGAAATACA+CGG 0.751119 tig0023052:-94223 Msa1404300:intron
AAGGTAATTCAAGTACTCCG+GGG 0.755279 tig0023052:-92814 Msa1404300:CDS
ATATCAGAAGAAGATCGTAG+CGG 0.769117 tig0023052:-95250 Msa1404300:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATATTTTTTTATTAAA+AGG - tig0023052:93171-93190 Msa1404300:intron 0.0%
!!! TTTATATTTTTTTATTAAAA+GGG - tig0023052:93172-93191 Msa1404300:intron 0.0%
!! AAATTAAAATTAGCATTTAA+CGG + tig0023052:92893-92912 None:intergenic 10.0%
!!! AATCTCTTTAATTTTACTAA+TGG - tig0023052:92405-92424 Msa1404300:CDS 15.0%
!! TCATATAACAAAAATAGTTA+CGG + tig0023052:92642-92661 None:intergenic 15.0%
!! AATTAAAATTAGCATTTAAC+GGG + tig0023052:92892-92911 None:intergenic 15.0%
!! AATAATGGTTATGGAATTAT+TGG - tig0023052:92109-92128 Msa1404300:three_prime_UTR 20.0%
!! ATAATGGTTATGGAATTATT+GGG - tig0023052:92110-92129 Msa1404300:three_prime_UTR 20.0%
!!! ATGATTGATATTCCTAATTT+TGG - tig0023052:92157-92176 Msa1404300:three_prime_UTR 20.0%
!!! TGATTGATATTCCTAATTTT+GGG - tig0023052:92158-92177 Msa1404300:three_prime_UTR 20.0%
!! TATAAATGATAAGCTTCTAT+TGG - tig0023052:92279-92298 Msa1404300:three_prime_UTR 20.0%
!! ATATAACAAAAATAGTTACG+GGG + tig0023052:92640-92659 None:intergenic 20.0%
!! CATATAACAAAAATAGTTAC+GGG + tig0023052:92641-92660 None:intergenic 20.0%
!!! TTTTATTAATTAAATCTCCC+CGG + tig0023052:92703-92722 None:intergenic 20.0%
!!! GCTAATTTTAATTTTTTGTG+TGG - tig0023052:92899-92918 Msa1404300:CDS 20.0%
!!! TAAATATAAACTTGTTTGAC+AGG - tig0023052:92934-92953 Msa1404300:CDS 20.0%
!!! AAATATAAACTTGTTTGACA+GGG - tig0023052:92935-92954 Msa1404300:CDS 20.0%
!! TACTGTTTGTTTATATAATC+TGG - tig0023052:93037-93056 Msa1404300:intron 20.0%
!! GATATTTATATTACACTACT+GGG - tig0023052:93195-93214 Msa1404300:intron 20.0%
!!! AATCATTTTAGGCAAATAAT+AGG + tig0023052:93520-93539 None:intergenic 20.0%
!! TTGCCTAAAATGATTAAAAT+TGG - tig0023052:93525-93544 Msa1404300:intron 20.0%
!! TCTAATAGAAAATAGAATGT+TGG + tig0023052:93566-93585 None:intergenic 20.0%
!! TTTCTATTAGAGTCAATAAA+AGG - tig0023052:93575-93594 Msa1404300:intron 20.0%
!! TTCTATTAGAGTCAATAAAA+GGG - tig0023052:93576-93595 Msa1404300:intron 20.0%
!! AAATTCAAGCAATAACAAAA+TGG - tig0023052:93805-93824 Msa1404300:intron 20.0%
!! AAAACAACATAAAATTATGC+AGG + tig0023052:94060-94079 None:intergenic 20.0%
!! CATTATTATACCAATAACAA+AGG - tig0023052:94960-94979 Msa1404300:CDS 20.0%
!! ATTAGGTTATATAGATTCTT+TGG - tig0023052:95047-95066 Msa1404300:CDS 20.0%
!!! TTTTCTAACATATAATCACT+AGG + tig0023052:95193-95212 None:intergenic 20.0%
! ACTGAAAATTAGATAGTGAA+TGG + tig0023052:92072-92091 None:intergenic 25.0%
! TATAACAAAAATAGTTACGG+GGG + tig0023052:92639-92658 None:intergenic 25.0%
! ACAATAGTTGCATAAAATGT+TGG - tig0023052:93144-93163 Msa1404300:intron 25.0%
! CAATAGTTGCATAAAATGTT+GGG - tig0023052:93145-93164 Msa1404300:intron 25.0%
! AATAGTTGCATAAAATGTTG+GGG - tig0023052:93146-93165 Msa1404300:intron 25.0%
! GGATATTTATATTACACTAC+TGG - tig0023052:93194-93213 Msa1404300:intron 25.0%
! TTCATATTTCATAATGAGGT+AGG + tig0023052:93373-93392 None:intergenic 25.0%
! GGATTTCATATTTCATAATG+AGG + tig0023052:93377-93396 None:intergenic 25.0%
! TCAACATTTCCAAATGTAAA+TGG + tig0023052:93402-93421 None:intergenic 25.0%
!!! AGGCCAATTTTAATCATTTT+AGG + tig0023052:93531-93550 None:intergenic 25.0%
!!! AAATGATTAAAATTGGCCTT+AGG - tig0023052:93532-93551 Msa1404300:intron 25.0%
! TTGACAAATGATTAATTGAC+AGG - tig0023052:93757-93776 Msa1404300:intron 25.0%
!! TTATCCAAATTCTGAGAAAT+TGG + tig0023052:94250-94269 None:intergenic 25.0%
!! TCAGATGAATTATTTAAAGC+AGG + tig0023052:94301-94320 None:intergenic 25.0%
!! ATTTCTATAACTAGGCTTTT+CGG + tig0023052:94686-94705 None:intergenic 25.0%
! TTATAGAAATACCAAGGAAA+AGG - tig0023052:94696-94715 Msa1404300:CDS 25.0%
!! TACTTTGTTTCCTTTGTTAT+TGG + tig0023052:94973-94992 None:intergenic 25.0%
!! TGTAAAGATCTTTTTGTTCA+AGG - tig0023052:95153-95172 Msa1404300:five_prime_UTR 25.0%
! TATGTTAGAAAACATTACTC+TGG - tig0023052:95201-95220 Msa1404300:five_prime_UTR 25.0%
TCTTCTCATTCTGCTAATAA+TGG - tig0023052:92094-92113 Msa1404300:three_prime_UTR 30.0%
CATTCTGCTAATAATGGTTA+TGG - tig0023052:92100-92119 Msa1404300:three_prime_UTR 30.0%
TTATGGAATTATTGGGAAAC+CGG - tig0023052:92117-92136 Msa1404300:three_prime_UTR 30.0%
! TAAAGCATTAATGTCTAGCT+TGG - tig0023052:92225-92244 Msa1404300:three_prime_UTR 30.0%
ACAATATAGTCAAAAGTCAC+TGG + tig0023052:92359-92378 None:intergenic 30.0%
TTTCTTCTTATAGCCTGAAA+TGG - tig0023052:92494-92513 Msa1404300:CDS 30.0%
TTTACTTTCTTCTGTATCGT+AGG - tig0023052:92775-92794 Msa1404300:CDS 30.0%
! ATCGAGCAAATTTTTCTTCT+TGG + tig0023052:92804-92823 None:intergenic 30.0%
! AAGAAGAAAAATTTGCTCGA+TGG - tig0023052:92803-92822 Msa1404300:CDS 30.0%
! TAGCATTTAACGGGTAAAAA+TGG + tig0023052:92883-92902 None:intergenic 30.0%
ATATTTCATAATGAGGTAGG+AGG + tig0023052:93370-93389 None:intergenic 30.0%
GAAATCCTACCATTTACATT+TGG - tig0023052:93390-93409 Msa1404300:CDS 30.0%
CATTTCCAAATGTAAATGGT+AGG + tig0023052:93398-93417 None:intergenic 30.0%
TTGGAAATGTTGAATCTCAA+AGG - tig0023052:93409-93428 Msa1404300:CDS 30.0%
TGCTTACAAATACCAAGAAT+GGG + tig0023052:93476-93495 None:intergenic 30.0%
TTGCTTACAAATACCAAGAA+TGG + tig0023052:93477-93496 None:intergenic 30.0%
! ATAGGTCAAAGCATGAATTT+TGG + tig0023052:93502-93521 None:intergenic 30.0%
TATTAGAGTCAATAAAAGGG+TGG - tig0023052:93579-93598 Msa1404300:intron 30.0%
TGACGTAATTATGCAATACA+GGG + tig0023052:93723-93742 None:intergenic 30.0%
ATGACGTAATTATGCAATAC+AGG + tig0023052:93724-93743 None:intergenic 30.0%
AGGAACAAATCCTTGAATAA+AGG + tig0023052:93917-93936 None:intergenic 30.0%
! AATTCTGAGAAATTGGTGAT+GGG + tig0023052:94243-94262 None:intergenic 30.0%
! AAATTCTGAGAAATTGGTGA+TGG + tig0023052:94244-94263 None:intergenic 30.0%
ATCACCAATTTCTCAGAATT+TGG - tig0023052:94243-94262 Msa1404300:CDS 30.0%
! TCCTTGGTATTTCTATAACT+AGG + tig0023052:94694-94713 None:intergenic 30.0%
GAAGAAATAACCAGTTACAT+AGG - tig0023052:94997-95016 Msa1404300:CDS 30.0%
AAATAACCAGTTACATAGGA+TGG - tig0023052:95001-95020 Msa1404300:CDS 30.0%
ATAAAACCATCCTATGTAAC+TGG + tig0023052:95010-95029 None:intergenic 30.0%
!! AGTTACATAGGATGGTTTTA+TGG - tig0023052:95009-95028 Msa1404300:CDS 30.0%
GAACAAAAAGATCTTTACAG+TGG + tig0023052:95152-95171 None:intergenic 30.0%
ATATCAGAAGAAGATCGTAG+CGG - tig0023052:91965-91984 Msa1404300:three_prime_UTR 35.0%
GATAATGAATCTGAGCTTGA+TGG - tig0023052:92019-92038 Msa1404300:three_prime_UTR 35.0%
GATGGAGAATTAGAATTGAG+TGG - tig0023052:92037-92056 Msa1404300:three_prime_UTR 35.0%
ATATCACTTTCATCATGTGC+CGG + tig0023052:92139-92158 None:intergenic 35.0%
CTTGGATTCAACCCAAAATT+AGG + tig0023052:92172-92191 None:intergenic 35.0%
! TTTATTGAGTTGCCAAAGCT+TGG + tig0023052:92190-92209 None:intergenic 35.0%
! AGCTTTGGCAACTCAATAAA+TGG - tig0023052:92190-92209 Msa1404300:three_prime_UTR 35.0%
ATTGTATTGCAACTCTGAAC+AGG + tig0023052:92251-92270 None:intergenic 35.0%
AGAGTTGCAATACAATAGCT+TGG - tig0023052:92255-92274 Msa1404300:three_prime_UTR 35.0%
GAGTTGCAATACAATAGCTT+GGG - tig0023052:92256-92275 Msa1404300:three_prime_UTR 35.0%
CTATTGGAGCTTCAAAGTAT+TGG - tig0023052:92295-92314 Msa1404300:exon 35.0%
TAGTCAAAAGTCACTGGAAT+AGG + tig0023052:92353-92372 None:intergenic 35.0%
CACAGTATGACCATTTAGAT+CGG - tig0023052:92669-92688 Msa1404300:CDS 35.0%
GACAGCTTATGAGAAATACA+CGG - tig0023052:92992-93011 Msa1404300:CDS 35.0%
GGGGTAAAACTAAATTAGCA+TGG + tig0023052:93088-93107 None:intergenic 35.0%
GAGACATATCAAAGTGTGAA+AGG - tig0023052:93292-93311 Msa1404300:CDS 35.0%
! AATGTTGGACGATTTTCCTA+AGG + tig0023052:93551-93570 None:intergenic 35.0%
TTGTTACAACTGCAACACTA+AGG + tig0023052:93682-93701 None:intergenic 35.0%
TTAGTGTTGCAGTTGTAACA+AGG - tig0023052:93681-93700 Msa1404300:intron 35.0%
!! GCAATACAGGGCATTTTATA+GGG + tig0023052:93711-93730 None:intergenic 35.0%
!! TGCAATACAGGGCATTTTAT+AGG + tig0023052:93712-93731 None:intergenic 35.0%
AATTACGTCATATGTCAGAG+TGG - tig0023052:93733-93752 Msa1404300:intron 35.0%
! GGCATTTGTTAAATGGACAT+TGG - tig0023052:93844-93863 Msa1404300:intron 35.0%
TACCACCAATTTGAAGATAC+AGG - tig0023052:93872-93891 Msa1404300:intron 35.0%
TCTTGCCTGTATCTTCAAAT+TGG + tig0023052:93880-93899 None:intergenic 35.0%
TTTCCTAACAATGCTATGCT+GGG + tig0023052:93951-93970 None:intergenic 35.0%
ATTTCCTAACAATGCTATGC+TGG + tig0023052:93952-93971 None:intergenic 35.0%
AGCATTGTTAGGAAATCAGA+TGG - tig0023052:93956-93975 Msa1404300:intron 35.0%
TGTTAGGAAATCAGATGGAT+TGG - tig0023052:93961-93980 Msa1404300:intron 35.0%
CCAGAAATTAATGAAGAACC+TGG + tig0023052:94037-94056 None:intergenic 35.0%
CCAGGTTCTTCATTAATTTC+TGG - tig0023052:94034-94053 Msa1404300:intron 35.0%
ATGCTGACACAACAGATATA+TGG + tig0023052:94087-94106 None:intergenic 35.0%
AAAATCTAGTGTGTGCTGAA+AGG + tig0023052:94163-94182 None:intergenic 35.0%
!! ATGAAGATTTCTGGTCAAAC+AGG - tig0023052:94335-94354 Msa1404300:intron 35.0%
!! TGAAGATTTCTGGTCAAACA+GGG - tig0023052:94336-94355 Msa1404300:intron 35.0%
!! GAATTGTTCCTTGATGATGT+CGG - tig0023052:94370-94389 Msa1404300:CDS 35.0%
!! AATTGTTCCTTGATGATGTC+GGG - tig0023052:94371-94390 Msa1404300:CDS 35.0%
TCAAGGTAATTCAAGTACTC+CGG - tig0023052:94399-94418 Msa1404300:CDS 35.0%
! TTTGTAGTTCCATTTCTGGA+TGG + tig0023052:94508-94527 None:intergenic 35.0%
! AGCTTTTGTAGTTCCATTTC+TGG + tig0023052:94512-94531 None:intergenic 35.0%
AGAAATGGAACTACAAAAGC+TGG - tig0023052:94511-94530 Msa1404300:intron 35.0%
!!! TTTCTGCTTAGGCTTTGTTT+TGG + tig0023052:94575-94594 None:intergenic 35.0%
!! CAGCATTCTGTTTCTGTAAA+TGG - tig0023052:94601-94620 Msa1404300:intron 35.0%
GCCTAGTTATAGAAATACCA+AGG - tig0023052:94690-94709 Msa1404300:CDS 35.0%
!! TGGTTGAATATTGATGACGA+TGG - tig0023052:94838-94857 Msa1404300:intron 35.0%
ACAAGATCATGACGACTTTA+TGG - tig0023052:94864-94883 Msa1404300:intron 35.0%
CAAGATCATGACGACTTTAT+GGG - tig0023052:94865-94884 Msa1404300:intron 35.0%
CCATCATATTCAAGTCTGAA+AGG + tig0023052:94912-94931 None:intergenic 35.0%
CCTTTCAGACTTGAATATGA+TGG - tig0023052:94909-94928 Msa1404300:CDS 35.0%
GGCTAATTCTGTCTACAATT+AGG - tig0023052:95030-95049 Msa1404300:CDS 35.0%
CTCTTACAAATCAGAGAACA+AGG - tig0023052:95230-95249 Msa1404300:five_prime_UTR 35.0%
!! TTTGGGTTGAATCCAAGCTT+TGG - tig0023052:92175-92194 Msa1404300:three_prime_UTR 40.0%
!! GTAAGCTTACCACTGATTCA+AGG + tig0023052:92327-92346 None:intergenic 40.0%
AGAAGAGGATGAAGCCATAT+CGG - tig0023052:92521-92540 Msa1404300:CDS 40.0%
CCTAGTAATATCCTCCGATA+TGG + tig0023052:92538-92557 None:intergenic 40.0%
CCATATCGGAGGATATTACT+AGG - tig0023052:92535-92554 Msa1404300:CDS 40.0%
TCGGAGGATATTACTAGGTT+AGG - tig0023052:92540-92559 Msa1404300:CDS 40.0%
AAAAATAGTTACGGGGGTAG+GGG + tig0023052:92633-92652 None:intergenic 40.0%
CAAAAATAGTTACGGGGGTA+GGG + tig0023052:92634-92653 None:intergenic 40.0%
ACAAAAATAGTTACGGGGGT+AGG + tig0023052:92635-92654 None:intergenic 40.0%
ATTTAGATCGGTTGTAGAGC+CGG - tig0023052:92681-92700 Msa1404300:CDS 40.0%
CATAAGCTGTCACAACAAGT+TGG + tig0023052:92983-93002 None:intergenic 40.0%
!!! TCAGGTCTTTTTTCTGAGTG+CGG - tig0023052:93262-93281 Msa1404300:CDS 40.0%
GACTTTGCTAACAGAAACGT+GGG + tig0023052:93625-93644 None:intergenic 40.0%
AGACTTTGCTAACAGAAACG+TGG + tig0023052:93626-93645 None:intergenic 40.0%
AGAGAACTAGATCACAAGCT+AGG - tig0023052:93654-93673 Msa1404300:intron 40.0%
ATTAATTGACAGGCTTGTCG+AGG - tig0023052:93767-93786 Msa1404300:intron 40.0%
! CTGCACTGGCATTTGTTAAA+TGG - tig0023052:93837-93856 Msa1404300:intron 40.0%
TGCCTGTATCTTCAAATTGG+TGG + tig0023052:93877-93896 None:intergenic 40.0%
TTTCAGCGAGCCTTTATTCA+AGG - tig0023052:93904-93923 Msa1404300:intron 40.0%
!! TAGGAAATCAGATGGATTGG+AGG - tig0023052:93964-93983 Msa1404300:intron 40.0%
! TTTTCTTTCTGCAGCTTCCA+TGG - tig0023052:94204-94223 Msa1404300:intron 40.0%
TTTCTTTCTGCAGCTTCCAT+GGG - tig0023052:94205-94224 Msa1404300:intron 40.0%
AATTCATCTGAGCAAACCAG+TGG - tig0023052:94310-94329 Msa1404300:intron 40.0%
CCAGAAATCTTCATTTCCAC+TGG + tig0023052:94329-94348 None:intergenic 40.0%
CCAGTGGAAATGAAGATTTC+TGG - tig0023052:94326-94345 Msa1404300:intron 40.0%
!! ATTGTTCCTTGATGATGTCG+GGG - tig0023052:94372-94391 Msa1404300:CDS 40.0%
CAAGGTAATTCAAGTACTCC+GGG - tig0023052:94400-94419 Msa1404300:CDS 40.0%
AAGGTAATTCAAGTACTCCG+GGG - tig0023052:94401-94420 Msa1404300:CDS 40.0%
TCTCTAACAAGCAGCACAAA+AGG - tig0023052:94433-94452 Msa1404300:intron 40.0%
CAAGCATCATCAAGTGCTAA+AGG - tig0023052:94538-94557 Msa1404300:intron 40.0%
! TTTGAAACAGAAGGCAATGC+CGG + tig0023052:94658-94677 None:intergenic 40.0%
!! TCGGTAGACTTTGAAACAGA+AGG + tig0023052:94667-94686 None:intergenic 40.0%
ACCAAGGAAAAGGATGAGTT+TGG - tig0023052:94706-94725 Msa1404300:CDS 40.0%
! GAAAAGGATGAGTTTGGCTT+GGG - tig0023052:94712-94731 Msa1404300:intron 40.0%
TGGAGGTTGGACAAATCAAT+TGG + tig0023052:94751-94770 None:intergenic 40.0%
ATGGTCAAGATCTTGGTTCA+TGG - tig0023052:94818-94837 Msa1404300:intron 40.0%
AAGTCTGAAAGGTCATCCAT+GGG + tig0023052:94901-94920 None:intergenic 40.0%
GCTATAAGTCGTTGACAGAG+AGG + tig0023052:91938-91957 None:intergenic 45.0%
TGGACTTGACCTTGAATCAG+TGG - tig0023052:92315-92334 Msa1404300:CDS 45.0%
TCCTCTTCTTGCACCATTTC+AGG + tig0023052:92510-92529 None:intergenic 45.0%
GCATCAATTGTACCTGTCCT+TGG + tig0023052:92575-92594 None:intergenic 45.0%
AAAATAGTTACGGGGGTAGG+GGG + tig0023052:92632-92651 None:intergenic 45.0%
GGCTCTACAACCGATCTAAA+TGG + tig0023052:92682-92701 None:intergenic 45.0%
TTTAGATCGGTTGTAGAGCC+GGG - tig0023052:92682-92701 Msa1404300:CDS 45.0%
!!! TTAGTTTTACCCCGAACCTC+TGG - tig0023052:93095-93114 Msa1404300:intron 45.0%
!! TAGTTTTACCCCGAACCTCT+GGG - tig0023052:93096-93115 Msa1404300:intron 45.0%
TGGGTAGTGATTTCAGAGTG+AGG - tig0023052:93214-93233 Msa1404300:CDS 45.0%
GGGTAGTGATTTCAGAGTGA+GGG - tig0023052:93215-93234 Msa1404300:CDS 45.0%
CAATGACAGAGAGACCAAAC+AGG + tig0023052:93241-93260 None:intergenic 45.0%
TGGTCTCTCTGTCATTGTTC+AGG - tig0023052:93244-93263 Msa1404300:CDS 45.0%
!! CGACAGTTTTAGCCCATTCT+TGG - tig0023052:93461-93480 Msa1404300:intron 45.0%
GGGACTTCATCATCACACAA+TGG + tig0023052:93605-93624 None:intergenic 45.0%
TATGCTGGGAAGAAGCAGTT+AGG + tig0023052:93937-93956 None:intergenic 45.0%
CTTCCCAGCATAGCATTGTT+AGG - tig0023052:93945-93964 Msa1404300:intron 45.0%
! AGAGACAGAGGAGAAGCATA+TGG + tig0023052:94004-94023 None:intergenic 45.0%
ATATGCTTCTCCTCTGTCTC+TGG - tig0023052:94003-94022 Msa1404300:intron 45.0%
TGTGTGCTGAAAGGAGCAAA+AGG + tig0023052:94154-94173 None:intergenic 45.0%
!! TGAGAAATTGGTGATGGGCT+CGG + tig0023052:94238-94257 None:intergenic 45.0%
!! TTGTTCCTTGATGATGTCGG+GGG - tig0023052:94373-94392 Msa1404300:CDS 45.0%
AATTCAAGTACTCCGGGGAT+TGG - tig0023052:94406-94425 Msa1404300:CDS 45.0%
GTTAGAGAACTTCCAATCCC+CGG + tig0023052:94421-94440 None:intergenic 45.0%
CAAGCAGCACAAAAGGAAAG+AGG - tig0023052:94440-94459 Msa1404300:intron 45.0%
AAAAGGAAAGAGGAGCGAGA+GGG - tig0023052:94450-94469 Msa1404300:intron 45.0%
!! AGAGAGGTACCATCCAGAAA+TGG - tig0023052:94496-94515 Msa1404300:intron 45.0%
! TGCTGAGTTGCTTTCTGCTT+AGG + tig0023052:94586-94605 None:intergenic 45.0%
GTTTCTGTAAATGGCCTCCT+TGG - tig0023052:94610-94629 Msa1404300:intron 45.0%
! GCCAAACTCATCCTTTTCCT+TGG + tig0023052:94710-94729 None:intergenic 45.0%
GGAAAAGGATGAGTTTGGCT+TGG - tig0023052:94711-94730 Msa1404300:CDS 45.0%
GATCTTGACCATTGTCAGCA+AGG + tig0023052:94810-94829 None:intergenic 45.0%
GCTGACAATGGTCAAGATCT+TGG - tig0023052:94811-94830 Msa1404300:intron 45.0%
TATGGGCCTTGAAATTCCCA+TGG - tig0023052:94882-94901 Msa1404300:intron 45.0%
GGTCATCCATGGGAATTTCA+AGG + tig0023052:94891-94910 None:intergenic 45.0%
CAAGTCTGAAAGGTCATCCA+TGG + tig0023052:94902-94921 None:intergenic 45.0%
CGTCACTCGAAAACAACACT+TGG + tig0023052:95086-95105 None:intergenic 45.0%
!!! TTATATTTTTTTATTAAAAG+GGG - tig0023052:93173-93192 Msa1404300:intron 5.0%
TCAGAAGAAGATCGTAGCGG+TGG - tig0023052:91968-91987 Msa1404300:three_prime_UTR 50.0%
GCCTGAAATGGTGCAAGAAG+AGG - tig0023052:92506-92525 Msa1404300:CDS 50.0%
AGAGGATGAAGCCATATCGG+AGG - tig0023052:92524-92543 Msa1404300:CDS 50.0%
AGGTTAGGCGAGCTTTACCA+AGG - tig0023052:92555-92574 Msa1404300:CDS 50.0%
TTAGATCGGTTGTAGAGCCG+GGG - tig0023052:92683-92702 Msa1404300:CDS 50.0%
AGATCTTCAGCCCAGAGGTT+CGG + tig0023052:93109-93128 None:intergenic 50.0%
TAGCTAGATCTTCAGCCCAG+AGG + tig0023052:93114-93133 None:intergenic 50.0%
TTTCAGAGTGAGGGCCTGTT+TGG - tig0023052:93224-93243 Msa1404300:CDS 50.0%
AATGGTCAAGCAAGCTGCAC+TGG - tig0023052:93823-93842 Msa1404300:intron 50.0%
CAAAAGGAAAGAGGAGCGAG+AGG - tig0023052:94449-94468 Msa1404300:intron 50.0%
GAGAGGGAGAGAGATGGAAA+GGG - tig0023052:94466-94485 Msa1404300:intron 50.0%
GAGAGAGATGGAAAGGGACA+CGG - tig0023052:94472-94491 Msa1404300:intron 50.0%
GTTGCCAGAGCAACCAAAAC+CGG - tig0023052:94636-94655 Msa1404300:intron 50.0%
!!! AATGCCGGTTTTGGTTGCTC+TGG + tig0023052:94643-94662 None:intergenic 50.0%
!!! ACAGAAGGCAATGCCGGTTT+TGG + tig0023052:94652-94671 None:intergenic 50.0%
!! AAGGATGAGTTTGGCTTGGG+TGG - tig0023052:94715-94734 Msa1404300:intron 50.0%
!! TGAGTTTGGCTTGGGTGGAT+TGG - tig0023052:94720-94739 Msa1404300:intron 50.0%
ACCATTGTCAGCAAGGTCAC+CGG + tig0023052:94803-94822 None:intergenic 50.0%
AGGCGAGCTTTACCAAGGAC+AGG - tig0023052:92560-92579 Msa1404300:CDS 55.0%
ATCTTCAGCCCAGAGGTTCG+GGG + tig0023052:93107-93126 None:intergenic 55.0%
GATCTTCAGCCCAGAGGTTC+GGG + tig0023052:93108-93127 None:intergenic 55.0%
!! GGTGTTGCTTCCAGAGACAG+AGG + tig0023052:94016-94035 None:intergenic 55.0%
! CTGTCTCTGGAAGCAACACC+AGG - tig0023052:94016-94035 Msa1404300:intron 55.0%
GAGTACCCCCGACATCATCA+AGG + tig0023052:94381-94400 None:intergenic 55.0%
!! GATGATGTCGGGGGTACTCA+AGG - tig0023052:94382-94401 Msa1404300:CDS 55.0%
CGAGAGGGAGAGAGATGGAA+AGG - tig0023052:94465-94484 Msa1404300:intron 55.0%
GTTGCTCTGGCAACTTGCCA+AGG + tig0023052:94630-94649 None:intergenic 55.0%
CCATTGTCAGCAAGGTCACC+GGG + tig0023052:94802-94821 None:intergenic 55.0%
GCTTGTCGAGGTGCATCGAG+TGG - tig0023052:93779-93798 Msa1404300:intron 60.0%
AGGAGCGAGAGGGAGAGAGA+TGG - tig0023052:94460-94479 Msa1404300:intron 60.0%
TGGAAAGGGACACGGCAGAG+AGG - tig0023052:94480-94499 Msa1404300:intron 60.0%
GCTCTGGCAACTTGCCAAGG+AGG + tig0023052:94627-94646 None:intergenic 60.0%
TTGTCCAACCTCCAGCTGCC+TGG - tig0023052:94757-94776 Msa1404300:intron 60.0%
CATTCCAGGCAGCTGGAGGT+TGG + tig0023052:94764-94783 None:intergenic 60.0%
CAACCTCCAGCTGCCTGGAA+TGG - tig0023052:94762-94781 Msa1404300:intron 60.0%
CTGCCTGGAATGGACGTGCT+CGG - tig0023052:94772-94791 Msa1404300:intron 60.0%
CCCGGTGACCTTGCTGACAA+TGG - tig0023052:94799-94818 Msa1404300:intron 60.0%
TGGGCTCGGCTGTGAACCCA+TGG + tig0023052:94224-94243 None:intergenic 65.0%
CGTCCATTCCAGGCAGCTGG+AGG + tig0023052:94768-94787 None:intergenic 65.0%
GCACGTCCATTCCAGGCAGC+TGG + tig0023052:94771-94790 None:intergenic 65.0%
TCGCCGAGCACGTCCATTCC+AGG + tig0023052:94778-94797 None:intergenic 65.0%
ATGGACGTGCTCGGCGATCC+CGG - tig0023052:94781-94800 Msa1404300:intron 65.0%
Chromosome Type Strat End Strand Name
tig0023052 gene 91931 95306 91931 ID=Msa1404300;Name=Msa1404300
tig0023052 mRNA 91931 95306 91931 ID=Msa1404300-mRNA-1;Parent=Msa1404300;Name=Msa1404300-mRNA-1;_AED=0.04;_eAED=0.04;_QI=226|1|1|1|1|1|6|370|453
tig0023052 exon 91931 93019 91931 ID=Msa1404300-mRNA-1:exon:19708;Parent=Msa1404300-mRNA-1
tig0023052 exon 93200 93458 93200 ID=Msa1404300-mRNA-1:exon:19707;Parent=Msa1404300-mRNA-1
tig0023052 exon 94224 94281 94224 ID=Msa1404300-mRNA-1:exon:19706;Parent=Msa1404300-mRNA-1
tig0023052 exon 94370 94440 94370 ID=Msa1404300-mRNA-1:exon:19705;Parent=Msa1404300-mRNA-1
tig0023052 exon 94656 94730 94656 ID=Msa1404300-mRNA-1:exon:19704;Parent=Msa1404300-mRNA-1
tig0023052 exon 94901 95306 94901 ID=Msa1404300-mRNA-1:exon:19703;Parent=Msa1404300-mRNA-1
tig0023052 five_prime_UTR 95081 95306 95081 ID=Msa1404300-mRNA-1:five_prime_utr;Parent=Msa1404300-mRNA-1
tig0023052 CDS 94901 95080 94901 ID=Msa1404300-mRNA-1:cds;Parent=Msa1404300-mRNA-1
tig0023052 CDS 94656 94730 94656 ID=Msa1404300-mRNA-1:cds;Parent=Msa1404300-mRNA-1
tig0023052 CDS 94370 94440 94370 ID=Msa1404300-mRNA-1:cds;Parent=Msa1404300-mRNA-1
tig0023052 CDS 94224 94281 94224 ID=Msa1404300-mRNA-1:cds;Parent=Msa1404300-mRNA-1
tig0023052 CDS 93200 93458 93200 ID=Msa1404300-mRNA-1:cds;Parent=Msa1404300-mRNA-1
tig0023052 CDS 92301 93019 92301 ID=Msa1404300-mRNA-1:cds;Parent=Msa1404300-mRNA-1
tig0023052 three_prime_UTR 91931 92300 91931 ID=Msa1404300-mRNA-1:three_prime_utr;Parent=Msa1404300-mRNA-1
Gene Sequence

>Msa1404300

ATGATTGATATTCCTAATTTTGGGTTGAATCCAAGCTTTGGCAACTCAATAAATGGTTTTCTTCATGATAAAGCATTAATGTCTAGCTTGGCCTGTTCAGAGTTGCAATACAATAGCTTGGGTATAAATGATAAGCTTCTATTGGAGCTTCAAAGTATTGGACTTGACCTTGAATCAGTGCCTGAAATGGTGCAAGAAGAGGATGAAGCCATATCGGAGGATATTACTAGGTTAGGCGAGCTTTACCAAGGACAGGTTTCCAAGAAGAAAAATTTGCTCGATGGATTGTTGAAATCTGCATCAGCAGCAAAAGAACTTCATGAAAAGGATTTTGATCAACGTGCTCTAGACCAACTTGTTGTGACAGCTTATGAGAAATACACGGCTTGTCGAGGTGCATCGAGTGGAAAAAATTCAAGCAATAACAAAATGGTCAAGCAAGCTGCACTGGCATTTGTTAAATGGACATTGGAGCGATACCACCAATTTGAAGATACAGGCAAGAGCTGTTTCAGCGAGCCTTTATTCAAGGATTTGTTCCTAACTGCTTCTTCCCAGCATAGCATTGTTAGGAAATCAGATGGATTGGAGGCTGATTCTTCAAAACCATATGCTTCTCCTCTGTCTCTGGAAGCAACACCAGCTTCCATGGGTTCACAGCCGAGCCCATCACCAATTTCTCAGAATTTGGATAATCTTGATCTCACTTCATCAGATATGCTTCCTGCTTTAAATAATTCATCTGAGCAAACCAGTGGAAATGAAGATTTCTGGTCAAACAGGGTGAAGAAGAGAGAATTGTTCCTTGATGATGTCGGGGGTACTCAAGGTAATTCAAGTACTCCGGGGATTGGAAGTTCTCTAACAAGCAGCACAAAAGGAAAGAGGAGCGAGAGGGAGAGAGATGGAAAGGGACACGGCAGAGAGGTACCATCCAGAAATGGAACTACAAAAGCTGGTAGACAAGCATCATCAAGTGCTAAAGGAGAAAGAAAAACCAAAACAAAGCCTAAGCAGAAAGCAACTCAGCATTCTGTTTCTGTAAATGGCCTCCTTGGCAAGTTGCCAGAGCAACCAAAACCGGCATTGCCTTCTGTTTCAAAGTCTACCGAAAAGCCTAGTTATAGAAATACCAAGGAAAAGGATGAGTTTGGCTTGGGTGGATTGGATGAGCCAATTGATTTGTCCAACCTCCAGCTGCCTGGAATGGACGTGCTCGGCGATCCCGGTGACCTTGCTGACAATGGTCAAGATCTTGGTTCATGGTTGAATATTGATGACGATGGATTACAAGATCATGACGACTTTATGGGCCTTGAAATTCCCATGGATGACCTTTCAGACTTGAATATGATGGTTTGA

Protein sequence

>Msa1404300

MIDIPNFGLNPSFGNSINGFLHDKALMSSLACSELQYNSLGINDKLLLELQSIGLDLESVPEMVQEEDEAISEDITRLGELYQGQVSKKKNLLDGLLKSASAAKELHEKDFDQRALDQLVVTAYEKYTACRGASSGKNSSNNKMVKQAALAFVKWTLERYHQFEDTGKSCFSEPLFKDLFLTASSQHSIVRKSDGLEADSSKPYASPLSLEATPASMGSQPSPSPISQNLDNLDLTSSDMLPALNNSSEQTSGNEDFWSNRVKKRELFLDDVGGTQGNSSTPGIGSSLTSSTKGKRSERERDGKGHGREVPSRNGTTKAGRQASSSAKGERKTKTKPKQKATQHSVSVNGLLGKLPEQPKPALPSVSKSTEKPSYRNTKEKDEFGLGGLDEPIDLSNLQLPGMDVLGDPGDLADNGQDLGSWLNIDDDGLQDHDDFMGLEIPMDDLSDLNMMV*