AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1043710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1043710 MtrunA17_Chr1g0153451 84.534 472 71 1 1 472 1 470 0.0 820
Msa1043710 MtrunA17_Chr8g0336651 73.404 470 122 2 3 469 778 1247 0.0 705
Msa1043710 MtrunA17_Chr8g0336651 70.513 468 137 1 1 468 1 467 0.0 682
Msa1043710 MtrunA17_Chr8g0336651 66.202 287 66 1 182 468 522 777 1.52e-121 384
Msa1043710 MtrunA17_Chr8g0336741 71.183 465 133 1 5 469 12 475 0.0 702
Msa1043710 MtrunA17_Chr8g0336691 73.291 468 124 1 3 469 916 1383 0.0 702
Msa1043710 MtrunA17_Chr8g0336691 73.987 469 121 1 1 468 8 476 0.0 697
Msa1043710 MtrunA17_Chr8g0336691 70.172 466 112 1 3 468 477 915 0.0 668
Msa1043710 MtrunA17_Chr8g0336731 69.197 461 141 1 8 468 34 493 0.0 661
Msa1043710 MtrunA17_Chr7g0232411 57.143 469 199 2 1 468 1 468 0.0 569
Msa1043710 MtrunA17_Chr7g0232391 58.422 469 193 2 1 468 1 468 0.0 568
Msa1043710 MtrunA17_Chr7g0232341 55.106 470 208 3 1 468 1 469 0.0 535
Msa1043710 MtrunA17_Chr7g0232331 55.388 464 204 3 1 462 1 463 0.0 526
Msa1043710 MtrunA17_Chr7g0275511 53.247 462 215 1 7 467 16 477 0.0 521
Msa1043710 MtrunA17_Chr7g0232401 53.961 467 207 3 1 462 1 464 3.49e-180 513
Msa1043710 MtrunA17_Chr8g0373301 52.361 466 210 6 4 464 7 465 2.32e-167 480
Msa1043710 MtrunA17_Chr8g0334851 50.943 477 220 8 1 468 1 472 4.14e-164 472
Msa1043710 MtrunA17_Chr7g0232311 53.092 469 216 3 1 468 1 466 5.06e-164 471
Msa1043710 MtrunA17_Chr6g0449931 51.059 472 225 5 1 468 1 470 4.09e-162 467
Msa1043710 MtrunA17_Chr7g0232351 59.631 379 152 1 1 379 1 378 5.42e-160 457
Msa1043710 MtrunA17_Chr8g0339631 50.633 474 225 6 1 468 1 471 1.23e-155 450
Msa1043710 MtrunA17_Chr6g0459311 49.787 470 227 7 1 466 8 472 1.99e-155 449
Msa1043710 MtrunA17_Chr8g0334861 48.101 474 232 9 1 468 1 466 4.64e-155 449
Msa1043710 MtrunA17_Chr8g0339461 49.476 477 231 5 1 469 1 475 1.94e-154 447
Msa1043710 MtrunA17_Chr8g0347281 47.660 470 233 6 7 472 19 479 4.41e-153 444
Msa1043710 MtrunA17_Chr6g0486251 49.149 470 230 7 1 466 1 465 1.28e-152 442
Msa1043710 MtrunA17_Chr6g0486201 49.149 470 230 7 1 466 1 465 1.28e-152 442
Msa1043710 MtrunA17_Chr8g0347271 47.021 470 236 6 7 472 20 480 3.92e-150 436
Msa1043710 MtrunA17_Chr8g0339441 49.160 476 190 8 1 468 1 432 1.31e-148 431
Msa1043710 MtrunA17_Chr8g0339451 48.485 462 228 5 15 468 7 466 3.03e-147 429
Msa1043710 MtrunA17_Chr1g0153461 91.781 219 18 0 254 472 1 219 6.38e-145 413
Msa1043710 MtrunA17_Chr8g0361371 45.607 478 244 8 2 469 3 474 4.40e-142 416
Msa1043710 MtrunA17_Chr8g0334831 45.194 489 241 10 1 469 1 482 1.17e-136 402
Msa1043710 MtrunA17_Chr8g0335161 46.316 475 242 9 1 468 1 469 1.17e-135 399
Msa1043710 MtrunA17_Chr8g0335141 44.937 474 249 8 1 468 4 471 1.66e-130 386
Msa1043710 MtrunA17_Chr8g0339601 48.795 332 165 3 142 468 2 333 1.75e-107 322
Msa1043710 MtrunA17_Chr8g0370941 38.604 487 266 13 3 462 5 485 4.40e-94 294
Msa1043710 MtrunA17_Chr6g0462541 34.583 480 274 9 7 466 5 464 1.20e-90 284
Msa1043710 MtrunA17_Chr3g0079731 34.898 490 294 9 1 470 1 485 6.32e-90 282
Msa1043710 MtrunA17_Chr6g0462571 35.537 484 262 10 7 466 5 462 3.49e-89 280
Msa1043710 MtrunA17_Chr6g0462521 35.244 471 270 11 7 466 5 451 3.46e-87 274
Msa1043710 MtrunA17_Chr6g0462531 34.711 484 269 10 7 466 5 465 6.26e-87 274
Msa1043710 MtrunA17_Chr5g0403641 35.639 477 261 10 1 462 54 499 2.66e-85 271
Msa1043710 MtrunA17_Chr6g0462551 32.845 478 286 11 7 466 5 465 5.79e-84 266
Msa1043710 MtrunA17_Chr6g0449991 43.658 339 165 7 1 334 1 318 5.87e-75 238
Msa1043710 MtrunA17_Chr8g0337381 82.836 134 21 1 339 472 1 132 3.31e-74 229
Msa1043710 MtrunA17_Chr5g0442541 32.845 478 284 12 3 461 2 461 2.41e-70 231
Msa1043710 MtrunA17_Chr5g0442491 33.888 481 284 15 3 461 2 470 1.05e-69 229
Msa1043710 MtrunA17_Chr5g0448521 32.489 474 293 13 3 461 2 463 2.39e-69 228
Msa1043710 MtrunA17_Chr5g0442561 31.447 477 299 13 3 461 2 468 1.18e-66 221
Msa1043710 MtrunA17_Chr5g0442581 32.305 486 287 15 3 461 2 472 9.52e-66 220
Msa1043710 MtrunA17_Chr2g0302961 32.845 478 278 16 6 461 5 461 1.92e-65 218
Msa1043710 MtrunA17_Chr5g0442521 31.809 481 295 15 3 461 2 471 3.13e-64 215
Msa1043710 MtrunA17_Chr2g0302991 31.423 471 291 12 6 461 5 458 3.34e-64 214
Msa1043710 MtrunA17_Chr5g0429711 31.866 477 284 15 1 461 6 457 3.12e-62 209
Msa1043710 MtrunA17_Chr5g0429681 31.120 482 286 14 1 461 39 495 1.01e-59 204
Msa1043710 MtrunA17_Chr5g0442601 31.546 485 292 14 3 461 401 871 9.50e-59 207
Msa1043710 MtrunA17_Chr5g0442601 32.704 318 178 7 94 402 43 333 1.39e-42 161
Msa1043710 MtrunA17_Chr5g0442511 30.335 478 280 15 3 461 46 489 7.80e-57 196
Msa1043710 MtrunA17_Chr5g0414331 35.150 367 203 9 107 461 106 449 6.40e-56 192
Msa1043710 MtrunA17_Chr8g0366391 30.444 496 294 14 5 470 8 482 8.50e-56 193
Msa1043710 MtrunA17_Chr7g0265141 34.078 358 194 10 123 454 133 474 2.01e-54 189
Msa1043710 MtrunA17_Chr5g0414321 29.752 484 267 14 5 461 10 447 7.26e-54 187
Msa1043710 MtrunA17_Chr4g0050341 29.659 499 287 16 6 466 19 491 1.63e-52 184
Msa1043710 MtrunA17_Chr1g0159551 31.139 395 240 10 68 455 80 449 2.52e-52 183
Msa1043710 MtrunA17_Chr1g0173121 30.213 470 275 12 7 455 15 452 7.25e-52 182
Msa1043710 MtrunA17_Chr3g0078841 31.707 369 210 9 108 454 118 466 7.67e-52 182
Msa1043710 MtrunA17_Chr3g0112771 34.844 353 205 7 117 461 112 447 8.73e-52 181
Msa1043710 MtrunA17_Chr3g0118701 28.231 503 304 17 1 472 10 486 1.82e-51 181
Msa1043710 MtrunA17_Chr5g0440421 31.034 493 284 17 2 454 6 482 5.70e-51 180
Msa1043710 MtrunA17_Chr3g0118671 28.252 492 299 14 1 461 1 469 1.72e-50 178
Msa1043710 MtrunA17_Chr5g0419761 39.498 319 140 12 168 461 191 481 3.72e-50 178
Msa1043710 MtrunA17_Chr3g0118691 28.252 492 299 16 1 461 10 478 5.96e-50 177
Msa1043710 MtrunA17_Chr3g0118711 28.313 498 300 17 6 472 13 484 9.99e-50 176
Msa1043710 MtrunA17_Chr8g0382021 33.154 371 213 10 97 455 131 478 1.19e-49 176
Msa1043710 MtrunA17_Chr4g0014061 38.267 277 135 7 207 461 206 468 1.73e-49 176
Msa1043710 MtrunA17_Chr4g0053321 30.462 476 287 15 5 461 25 475 2.62e-49 176
Msa1043710 MtrunA17_Chr6g0454151 31.903 373 215 9 108 461 121 473 6.19e-49 174
Msa1043710 MtrunA17_Chr6g0454301 30.040 496 275 20 6 461 263 726 7.94e-49 178
Msa1043710 MtrunA17_Chr6g0454301 32.068 237 126 6 232 454 3 218 8.23e-32 129
Msa1043710 MtrunA17_Chr3g0079711 45.745 188 99 2 283 467 3 190 8.01e-49 166
Msa1043710 MtrunA17_Chr4g0053501 29.630 486 295 16 2 464 6 467 1.81e-48 173
Msa1043710 MtrunA17_Chr5g0426431 31.224 474 267 20 6 447 12 458 2.38e-48 172
Msa1043710 MtrunA17_Chr8g0359821 30.707 368 214 10 108 454 119 466 2.73e-48 172
Msa1043710 MtrunA17_Chr4g0044511 31.527 406 213 15 95 461 121 500 3.13e-48 173
Msa1043710 MtrunA17_Chr6g0464881 28.310 491 283 14 1 462 1 451 1.26e-47 170
Msa1043710 MtrunA17_Chr5g0420801 29.574 470 297 15 6 462 7 455 1.56e-47 170
Msa1043710 MtrunA17_Chr6g0463861 34.737 285 159 9 206 470 201 478 5.16e-47 169
Msa1043710 MtrunA17_Chr3g0092641 29.387 473 277 18 6 447 12 458 1.45e-46 168
Msa1043710 MtrunA17_Chr3g0118721 35.714 266 140 7 208 461 39 285 1.65e-46 163
Msa1043710 MtrunA17_Chr7g0217881 30.108 372 207 11 108 461 121 457 1.70e-46 167
Msa1043710 MtrunA17_Chr6g0454201 34.899 298 162 8 169 454 192 469 2.15e-46 167
Msa1043710 MtrunA17_Chr4g0066131 36.957 276 147 8 206 461 202 470 2.18e-46 167
Msa1043710 MtrunA17_Chr7g0243631 36.760 321 154 12 164 461 188 482 2.31e-46 167
Msa1043710 MtrunA17_Chr7g0243801 37.710 297 149 8 191 468 200 479 2.34e-46 167
Msa1043710 MtrunA17_Chr6g0454321 27.917 480 282 16 6 449 10 461 4.35e-46 169
Msa1043710 MtrunA17_Chr6g0454341 27.049 488 300 15 6 461 10 473 8.94e-46 166
Msa1043710 MtrunA17_Chr4g0066221 36.364 275 148 8 207 461 209 476 9.79e-46 166
Msa1043710 MtrunA17_Chr7g0265151 29.175 497 287 16 5 461 8 479 2.19e-45 165
Msa1043710 MtrunA17_Chr4g0032331 30.061 489 272 18 1 462 1 446 4.04e-45 163
Msa1043710 MtrunA17_Chr7g0243681 35.127 316 161 9 164 461 186 475 4.40e-45 164
Msa1043710 MtrunA17_Chr7g0243771 37.037 297 151 8 191 468 199 478 5.79e-45 164
Msa1043710 MtrunA17_Chr8g0369341 29.350 477 297 13 6 461 7 464 6.81e-45 163
Msa1043710 MtrunA17_Chr8g0336331 29.521 376 223 10 108 461 117 472 7.61e-45 163
Msa1043710 MtrunA17_Chr4g0066151 35.870 276 150 9 206 461 207 475 8.92e-45 163
Msa1043710 MtrunA17_Chr7g0243931 37.410 278 137 7 207 461 223 486 9.76e-45 163
Msa1043710 MtrunA17_Chr7g0265051 28.953 487 298 16 5 459 8 478 1.02e-44 163
Msa1043710 MtrunA17_Chr1g0207981 32.581 310 175 7 167 462 180 469 1.10e-44 163
Msa1043710 MtrunA17_Chr7g0235051 38.889 288 133 10 195 458 178 446 1.21e-44 162
Msa1043710 MtrunA17_Chr2g0329111 29.814 483 288 18 1 452 1 463 1.32e-44 163
Msa1043710 MtrunA17_Chr6g0464841 27.835 485 278 16 6 462 11 451 1.61e-44 162
Msa1043710 MtrunA17_Chr2g0278711 27.255 499 291 16 3 462 8 473 1.96e-44 162
Msa1043710 MtrunA17_Chr8g0380531 29.894 378 217 10 108 466 110 458 2.56e-44 161
Msa1043710 MtrunA17_Chr7g0265101 28.032 503 284 21 5 459 8 480 2.87e-44 162
Msa1043710 MtrunA17_Chr6g0464871 27.883 477 286 12 6 461 23 462 4.96e-44 160
Msa1043710 MtrunA17_Chr3g0112761 30.352 369 233 8 108 469 102 453 7.61e-44 160
Msa1043710 MtrunA17_Chr3g0118771 26.908 498 307 16 6 472 21 492 9.31e-44 160
Msa1043710 MtrunA17_Chr7g0249931 28.719 484 281 18 3 462 37 480 9.78e-44 160
Msa1043710 MtrunA17_Chr6g0454361 29.365 378 226 9 105 461 119 476 1.11e-43 160
Msa1043710 MtrunA17_Chr7g0275681 33.866 313 159 9 168 461 193 476 1.62e-43 159
Msa1043710 MtrunA17_Chr7g0243871 36.567 268 143 6 207 461 215 468 1.77e-43 159
Msa1043710 MtrunA17_Chr4g0066261 30.878 353 204 11 128 461 146 477 1.95e-43 159
Msa1043710 MtrunA17_Chr4g0042931 29.328 491 300 16 2 470 3 468 2.16e-43 159
Msa1043710 MtrunA17_Chr4g0060511 37.500 280 134 8 207 461 220 483 2.96e-43 159
Msa1043710 MtrunA17_Chr5g0426401 35.117 299 162 9 169 454 20 299 3.22e-43 155
Msa1043710 MtrunA17_Chr6g0453951 27.600 500 300 16 3 464 54 529 4.53e-43 159
Msa1043710 MtrunA17_Chr8g0367221 28.893 488 288 17 2 461 1284 1740 4.83e-43 163
Msa1043710 MtrunA17_Chr8g0367221 28.016 489 271 16 2 451 794 1240 4.20e-40 154
Msa1043710 MtrunA17_Chr8g0367221 36.910 233 130 3 234 462 245 464 2.21e-38 149
Msa1043710 MtrunA17_Chr6g0454191 30.245 367 215 10 109 454 123 469 5.72e-43 158
Msa1043710 MtrunA17_Chr4g0044501 28.827 392 246 10 96 470 105 480 6.95e-43 158
Msa1043710 MtrunA17_Chr6g0454261 27.071 495 301 16 2 461 6 475 7.04e-43 158
Msa1043710 MtrunA17_Chr4g0042891 32.312 359 216 9 125 470 126 470 8.26e-43 157
Msa1043710 MtrunA17_Chr6g0453961 29.255 376 224 9 108 461 130 485 8.53e-43 158
Msa1043710 MtrunA17_Chr6g0454181 28.306 484 287 17 6 454 10 468 1.09e-42 157
Msa1043710 MtrunA17_Chr7g0249981 28.912 377 220 8 104 462 117 463 1.70e-42 157
Msa1043710 MtrunA17_Chr6g0454401 27.291 502 290 19 3 461 7 476 1.92e-42 157
Msa1043710 MtrunA17_Chr2g0294921 35.766 274 150 8 207 461 360 626 2.13e-42 159
Msa1043710 MtrunA17_Chr8g0377921 28.986 483 283 17 6 458 4 456 2.37e-42 156
Msa1043710 MtrunA17_Chr5g0428081 36.594 276 145 8 207 461 209 475 2.81e-42 156
Msa1043710 MtrunA17_Chr6g0454291 29.177 401 222 11 66 454 115 465 4.15e-42 155
Msa1043710 MtrunA17_Chr6g0452771 29.333 375 224 9 108 461 121 475 6.10e-42 155
Msa1043710 MtrunA17_Chr7g0243781 38.007 271 138 9 207 461 215 471 6.60e-42 155
Msa1043710 MtrunA17_Chr4g0044521 35.766 274 145 8 207 461 201 462 7.01e-42 155
Msa1043710 MtrunA17_Chr8g0374901 35.273 275 151 9 207 461 207 474 7.20e-42 155
Msa1043710 MtrunA17_Chr8g0374931 34.982 283 158 8 193 456 197 472 7.32e-42 155
Msa1043710 MtrunA17_Chr6g0464921 27.224 371 227 8 108 462 109 452 1.38e-41 154
Msa1043710 MtrunA17_Chr7g0218311 34.307 274 155 6 206 461 213 479 1.48e-41 154
Msa1043710 MtrunA17_Chr7g0265041 37.455 275 141 7 207 461 221 484 1.60e-41 154
Msa1043710 MtrunA17_Chr6g0454331 28.571 378 229 9 105 461 117 474 1.70e-41 154
Msa1043710 MtrunA17_Chr3g0098111 34.014 294 158 8 192 467 196 471 2.70e-41 153
Msa1043710 MtrunA17_Chr3g0121991 30.946 391 229 11 97 461 167 542 3.44e-41 154
Msa1043710 MtrunA17_Chr6g0454271 32.042 284 163 5 181 454 12 275 3.48e-41 149
Msa1043710 MtrunA17_Chr7g0243851 36.331 278 140 9 207 461 175 438 3.56e-41 152
Msa1043710 MtrunA17_Chr8g0361411 36.059 269 145 8 203 461 198 449 4.28e-41 152
Msa1043710 MtrunA17_Chr7g0249961 34.874 238 126 5 232 458 33 252 4.47e-41 148
Msa1043710 MtrunA17_Chr4g0066201 26.316 494 309 15 1 468 13 477 5.55e-41 153
Msa1043710 MtrunA17_Chr8g0355221 36.364 297 154 10 187 461 199 482 5.85e-41 153
Msa1043710 MtrunA17_Chr7g0243861 36.331 278 140 7 207 461 220 483 6.44e-41 153
Msa1043710 MtrunA17_Chr4g0072761 29.859 355 223 8 109 461 118 448 9.46e-41 151
Msa1043710 MtrunA17_Chr4g0011051 27.146 501 298 19 1 458 4 480 1.03e-40 152
Msa1043710 MtrunA17_Chr6g0463851 32.550 298 171 9 194 468 198 488 1.03e-40 152
Msa1043710 MtrunA17_Chr7g0243711 40.359 223 109 5 251 461 102 312 1.17e-40 148
Msa1043710 MtrunA17_Chr6g0464861 29.521 376 213 11 106 461 106 449 1.51e-40 151
Msa1043710 MtrunA17_Chr8g0374971 32.727 275 158 7 207 461 209 476 1.66e-40 151
Msa1043710 MtrunA17_Chr5g0423981 30.065 306 182 7 168 461 155 440 2.01e-40 150
Msa1043710 MtrunA17_Chr6g0454121 27.344 384 238 9 99 461 111 474 2.12e-40 151
Msa1043710 MtrunA17_Chr2g0294931 34.672 274 153 8 207 461 211 477 2.21e-40 151
Msa1043710 MtrunA17_Chr3g0122001 26.585 489 310 12 1 461 481 948 2.50e-40 154
Msa1043710 MtrunA17_Chr3g0122001 26.626 492 307 15 1 461 1 469 1.30e-38 149
Msa1043710 MtrunA17_Chr5g0431441 27.158 475 290 13 6 458 18 458 2.65e-40 150
Msa1043710 MtrunA17_Chr7g0241781 29.630 459 242 19 3 440 6 404 3.07e-40 150
Msa1043710 MtrunA17_Chr6g0482061 27.984 486 309 13 6 466 11 480 4.66e-40 150
Msa1043710 MtrunA17_Chr8g0350881 33.455 275 156 7 207 461 209 476 5.26e-40 150
Msa1043710 MtrunA17_Chr5g0401721 28.074 488 298 19 2 461 4 466 5.27e-40 150
Msa1043710 MtrunA17_Chr7g0243911 40.359 223 109 5 240 450 5 215 5.86e-40 143
Msa1043710 MtrunA17_Chr8g0374941 34.909 275 152 8 207 461 1146 1413 6.00e-40 154
Msa1043710 MtrunA17_Chr8g0374941 34.470 264 146 8 207 450 208 464 5.30e-38 148
Msa1043710 MtrunA17_Chr8g0374941 34.100 261 145 7 207 447 673 926 9.90e-37 144
Msa1043710 MtrunA17_Chr7g0243951 35.252 278 142 7 207 461 217 479 6.71e-40 150
Msa1043710 MtrunA17_Chr4g0066281 34.432 273 152 8 207 461 199 462 1.35e-39 149
Msa1043710 MtrunA17_Chr3g0118661 27.755 490 293 15 6 461 13 475 2.00e-39 148
Msa1043710 MtrunA17_Chr6g0454211 28.032 371 226 9 105 454 405 755 2.05e-39 151
Msa1043710 MtrunA17_Chr5g0431361 26.250 480 284 15 6 459 12 447 2.93e-39 147
Msa1043710 MtrunA17_Chr5g0431421 26.907 472 292 15 6 461 10 444 3.04e-39 147
Msa1043710 MtrunA17_Chr4g0066171 30.714 280 167 7 207 468 209 479 3.09e-39 148
Msa1043710 MtrunA17_Chr7g0218831 26.385 379 247 10 93 467 90 440 3.91e-39 147
Msa1043710 MtrunA17_Chr8g0334841 51.007 149 66 2 169 314 1 145 4.00e-39 139
Msa1043710 MtrunA17_Chr2g0294941 33.582 268 152 9 207 455 109 369 5.95e-39 145
Msa1043710 MtrunA17_Chr1g0179901 33.103 290 159 10 188 454 205 482 7.10e-39 147
Msa1043710 MtrunA17_Chr5g0419771 35.316 269 141 8 207 454 245 501 1.03e-38 147
Msa1043710 MtrunA17_Chr5g0431401 25.000 472 309 12 2 461 6 444 1.33e-38 145
Msa1043710 MtrunA17_Chr1g0207931 34.082 267 144 6 202 454 238 486 1.43e-38 146
Msa1043710 MtrunA17_Chr6g0454141 25.761 493 310 14 2 461 6 475 1.71e-38 146
Msa1043710 MtrunA17_Chr1g0165701 37.500 248 121 6 235 461 245 479 1.96e-38 146
Msa1043710 MtrunA17_Chr7g0218791 28.322 459 258 18 6 436 5 420 2.38e-38 145
Msa1043710 MtrunA17_Chr2g0278721 30.533 488 282 20 3 461 514 973 2.57e-38 149
Msa1043710 MtrunA17_Chr2g0278721 27.766 461 291 12 3 446 12 447 2.37e-34 137
Msa1043710 MtrunA17_Chr2g0307961 34.601 263 145 5 207 461 221 464 3.02e-38 145
Msa1043710 MtrunA17_Chr6g0454351 29.076 368 223 9 105 461 120 460 3.78e-38 144
Msa1043710 MtrunA17_Chr5g0412111 28.460 383 230 12 99 461 99 457 3.79e-38 144
Msa1043710 MtrunA17_Chr5g0410941 25.103 486 321 14 1 461 18 485 4.64e-38 145
Msa1043710 MtrunA17_Chr6g0454221 34.615 234 125 6 232 454 3 219 5.27e-38 140
Msa1043710 MtrunA17_Chr7g0250001 27.749 382 210 11 108 462 102 444 7.35e-38 144
Msa1043710 MtrunA17_Chr7g0243761 38.866 247 119 7 207 437 217 447 7.64e-38 144
Msa1043710 MtrunA17_Chr7g0218811 25.536 466 302 14 6 461 15 445 9.24e-38 143
Msa1043710 MtrunA17_Chr4g0072771 29.167 360 219 10 109 461 131 461 9.37e-38 143
Msa1043710 MtrunA17_Chr1g0207971 33.333 270 142 5 198 454 198 442 1.03e-37 143
Msa1043710 MtrunA17_Chr6g0454131 26.823 384 240 10 99 461 111 474 1.23e-37 143
Msa1043710 MtrunA17_Chr8g0336321 30.128 468 266 19 2 439 3 439 1.78e-37 143
Msa1043710 MtrunA17_Chr8g0377941 32.847 274 148 8 200 461 208 457 2.18e-37 142
Msa1043710 MtrunA17_Chr4g0044481 36.765 204 106 3 207 402 209 397 2.33e-37 142
Msa1043710 MtrunA17_Chr5g0431371 27.484 473 287 16 2 456 6 440 2.72e-37 142
Msa1043710 MtrunA17_Chr7g0265111 32.919 322 170 12 164 461 212 511 3.67e-37 143
Msa1043710 MtrunA17_Chr7g0218841 25.319 470 309 15 6 467 6 441 3.91e-37 141
Msa1043710 MtrunA17_Chr5g0416741 34.657 277 143 9 207 461 219 479 4.34e-37 142
Msa1043710 MtrunA17_Chr7g0243611 40.175 229 107 7 207 419 78 292 6.89e-37 137
Msa1043710 MtrunA17_Chr8g0365811 33.813 278 148 8 195 454 687 946 1.26e-36 144
Msa1043710 MtrunA17_Chr8g0365811 34.783 253 145 7 194 436 204 446 9.15e-35 138
Msa1043710 MtrunA17_Chr5g0401851 29.847 392 214 13 112 468 121 486 1.51e-36 140
Msa1043710 MtrunA17_Chr8g0336251 29.915 468 267 19 2 439 3 439 2.46e-36 139
Msa1043710 MtrunA17_Chr7g0241801 29.476 458 244 19 3 440 6 404 4.19e-36 138
Msa1043710 MtrunA17_Chr1g0207951 31.852 270 145 5 198 454 316 559 8.52e-36 141
Msa1043710 MtrunA17_Chr1g0207951 27.686 484 281 16 2 454 652 1097 2.79e-35 140
Msa1043710 MtrunA17_Chr1g0207861 33.793 290 154 9 195 467 202 470 1.38e-35 138
Msa1043710 MtrunA17_Chr1g0161351 32.982 285 153 8 194 461 230 493 2.67e-35 137
Msa1043710 MtrunA17_Chr6g0454171 31.183 279 148 7 194 461 60 305 2.70e-35 133
Msa1043710 MtrunA17_Chr6g0466831 29.412 493 267 21 3 461 15 460 2.72e-35 137
Msa1043710 MtrunA17_Chr5g0412101 26.893 383 237 8 100 461 106 466 5.67e-35 136
Msa1043710 MtrunA17_Chr6g0466841 28.221 489 278 19 3 461 15 460 5.77e-35 135
Msa1043710 MtrunA17_Chr1g0207831 32.982 285 149 8 193 461 201 459 8.01e-35 135
Msa1043710 MtrunA17_Chr3g0118751 24.851 503 292 16 1 472 1 448 1.07e-34 135
Msa1043710 MtrunA17_Chr3g0106231 24.473 474 290 13 6 458 18 444 1.10e-34 135
Msa1043710 MtrunA17_Chr3g0092031 37.113 194 106 3 254 446 1 179 2.14e-34 127
Msa1043710 MtrunA17_Chr4g0069611 28.355 462 270 16 3 440 12 436 2.71e-34 134
Msa1043710 MtrunA17_Chr5g0427571 38.372 258 129 11 196 439 32 273 2.90e-34 130
Msa1043710 MtrunA17_Chr7g0218821 27.128 376 234 12 93 459 101 445 3.68e-34 133
Msa1043710 MtrunA17_Chr5g0412131 28.497 386 226 11 100 461 106 465 6.68e-34 133
Msa1043710 MtrunA17_Chr5g0393591 30.921 304 144 12 167 458 179 428 1.37e-33 132
Msa1043710 MtrunA17_Chr6g0463891 28.021 389 231 13 111 471 123 490 2.43e-33 131
Msa1043710 MtrunA17_Chr5g0409591 35.238 210 125 3 255 461 273 474 5.38e-33 130
Msa1043710 MtrunA17_Chr7g0243811 42.029 207 100 7 207 407 190 382 6.63e-33 129
Msa1043710 MtrunA17_Chr8g0355011 27.838 370 197 10 90 441 20 337 8.49e-33 128
Msa1043710 MtrunA17_Chr2g0278741 27.607 489 307 15 3 472 94 554 9.43e-33 130
Msa1043710 MtrunA17_Chr5g0432731 29.474 285 164 8 182 454 26 285 1.59e-32 125
Msa1043710 MtrunA17_Chr4g0039881 35.122 205 117 3 258 461 245 434 9.61e-32 126
Msa1043710 MtrunA17_Chr3g0106251 31.765 255 142 7 208 454 52 282 3.82e-31 122
Msa1043710 MtrunA17_Chr5g0448551 28.863 343 195 8 109 433 107 418 3.17e-30 122
Msa1043710 MtrunA17_Chr5g0416821 31.915 282 152 9 207 471 221 479 8.20e-30 121
Msa1043710 MtrunA17_Chr6g0464091 35.714 196 110 3 246 440 266 446 2.69e-29 120
Msa1043710 MtrunA17_Chr7g0231631 32.491 277 145 9 202 461 4 255 2.84e-29 115
Msa1043710 MtrunA17_Chr6g0454251 28.058 417 236 19 2 379 3 394 4.64e-29 118
Msa1043710 MtrunA17_Chr2g0302851 33.846 195 115 1 246 440 257 437 8.95e-29 118
Msa1043710 MtrunA17_Chr4g0029151 36.170 188 108 4 259 442 265 444 2.59e-28 117
Msa1043710 MtrunA17_Chr4g0029131 36.170 188 108 4 259 442 257 436 4.98e-28 117
Msa1043710 MtrunA17_Chr6g0454371 34.659 176 98 4 279 454 1 159 1.70e-27 108
Msa1043710 MtrunA17_Chr5g0442501 29.299 314 201 11 3 305 2 305 1.70e-27 112
Msa1043710 MtrunA17_Chr8g0357361 33.498 203 112 5 207 402 63 249 3.72e-27 110
Msa1043710 MtrunA17_Chr2g0283041 30.976 297 174 11 151 436 151 427 1.38e-26 112
Msa1043710 MtrunA17_Chr4g0040691 32.524 206 126 2 258 461 260 454 6.34e-26 110
Msa1043710 MtrunA17_Chr1g0196851 26.247 461 279 15 2 436 45 470 9.60e-26 109
Msa1043710 MtrunA17_Chr6g0449971 58.750 80 33 0 389 468 1 80 1.24e-25 100
Msa1043710 MtrunA17_Chr5g0431431 28.800 250 146 5 187 433 135 355 6.21e-25 105
Msa1043710 MtrunA17_Chr3g0079721 26.460 291 197 7 1 277 1 288 1.46e-24 103
Msa1043710 MtrunA17_Chr4g0040711 29.167 288 183 8 162 442 162 435 1.75e-24 105
Msa1043710 MtrunA17_Chr4g0066141 37.333 150 82 3 324 461 198 347 3.70e-24 103
Msa1043710 MtrunA17_Chr8g0337371 64.789 71 25 0 199 269 392 462 9.45e-24 105
Msa1043710 MtrunA17_Chr6g0454231 29.762 252 129 6 203 454 3 206 9.64e-24 103
Msa1043710 MtrunA17_Chr8g0336261 35.714 154 82 4 279 432 1 137 1.82e-23 95.9
Msa1043710 MtrunA17_Chr5g0442551 28.125 256 162 5 99 349 56 294 3.48e-22 96.7
Msa1043710 MtrunA17_Chr2g0319791 31.295 278 166 9 172 441 174 434 1.06e-21 97.4
Msa1043710 MtrunA17_Chr2g0319751 27.706 462 275 21 5 441 484 911 2.60e-21 97.4
Msa1043710 MtrunA17_Chr2g0319751 30.688 189 92 5 257 441 257 410 3.57e-16 81.6
Msa1043710 MtrunA17_Chr2g0319731 26.022 465 281 16 4 441 23 451 3.41e-21 96.3
Msa1043710 MtrunA17_Chr1g0207881 35.065 154 85 5 306 454 230 373 4.72e-21 94.7
Msa1043710 MtrunA17_Chr2g0319761 34.921 189 108 4 258 442 258 435 7.21e-21 95.1
Msa1043710 MtrunA17_Chr2g0319801 25.974 462 285 15 4 441 6 434 9.92e-21 94.7
Msa1043710 MtrunA17_Chr8g0339611 43.077 130 69 2 1 127 1 128 5.61e-20 85.9
Msa1043710 MtrunA17_Chr2g0321331 31.844 179 91 4 267 442 94 244 2.34e-19 87.8
Msa1043710 MtrunA17_Chr7g0243731 48.052 77 40 0 333 409 2 78 3.14e-19 82.0
Msa1043710 MtrunA17_Chr6g0469961 31.579 171 99 5 139 299 2 164 7.85e-17 77.8
Msa1043710 MtrunA17_Chr4g0029161 30.851 188 90 6 259 442 257 408 2.30e-15 78.2
Msa1043710 MtrunA17_Chr7g0250021 24.242 330 195 10 3 304 9 311 8.15e-14 72.4
Msa1043710 MtrunA17_Chr6g0453981 28.571 147 90 4 169 303 61 204 1.19e-12 67.4
Msa1043710 MtrunA17_Chr6g0454391 42.424 66 34 2 356 421 13 74 4.49e-11 60.5
Msa1043710 MtrunA17_Chr6g0469951 36.458 96 49 2 378 466 1 91 8.64e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1043710 AT4G01070.1 51.073 466 224 3 3 466 5 468 3.06e-169 485
Msa1043710 AT1G01420.2 47.742 465 238 4 4 466 9 470 1.61e-154 448
Msa1043710 AT1G01420.1 47.742 465 238 4 4 466 6 467 2.33e-154 447
Msa1043710 AT1G01390.2 47.097 465 244 2 4 467 23 486 9.20e-149 434
Msa1043710 AT1G01390.1 47.097 465 244 2 4 467 6 469 1.28e-148 433
Msa1043710 AT4G01070.2 47.110 346 177 4 3 346 5 346 4.17e-102 309
Msa1043710 AT2G18570.1 37.712 472 270 12 6 464 5 465 5.93e-94 292
Msa1043710 AT3G50740.1 37.209 473 272 13 6 462 7 470 1.63e-93 292
Msa1043710 AT3G16520.3 34.979 466 284 8 7 465 6 459 5.48e-92 287
Msa1043710 AT5G66690.1 35.914 465 261 11 6 452 7 452 1.86e-89 281
Msa1043710 AT3G16520.2 35.033 451 274 8 7 450 6 444 2.13e-88 277
Msa1043710 AT3G16520.1 35.033 451 274 8 7 450 6 444 3.39e-88 277
Msa1043710 AT5G26310.1 35.205 463 267 10 6 452 7 452 4.96e-84 267
Msa1043710 AT2G18560.1 39.189 370 208 6 104 464 14 375 2.71e-83 262
Msa1043710 AT4G36770.1 36.463 458 263 13 5 448 3 446 1.89e-79 254
Msa1043710 AT1G07250.1 33.471 484 269 18 1 454 1 461 3.25e-68 226
Msa1043710 AT3G21800.1 31.753 485 276 15 7 458 6 468 3.96e-66 220
Msa1043710 AT2G29750.1 33.060 487 279 18 2 464 4 467 9.33e-66 219
Msa1043710 AT2G29740.1 32.919 483 271 18 2 454 4 463 1.29e-64 216
Msa1043710 AT1G07260.1 30.390 487 293 12 1 461 1 467 2.67e-64 215
Msa1043710 AT3G21790.1 31.020 490 287 14 5 461 3 474 1.50e-63 214
Msa1043710 AT3G21750.1 30.591 474 300 12 5 461 3 464 9.08e-63 211
Msa1043710 AT4G15280.1 30.629 493 280 15 5 461 3 469 9.74e-62 209
Msa1043710 AT4G15280.2 30.832 493 279 17 5 461 35 501 1.70e-61 209
Msa1043710 AT3G21760.1 34.540 359 217 6 109 454 116 469 6.23e-60 204
Msa1043710 AT4G15260.1 33.611 360 203 9 122 461 7 350 6.49e-60 201
Msa1043710 AT5G14860.1 32.383 491 270 17 6 461 8 471 1.08e-59 204
Msa1043710 AT2G16890.2 32.025 484 276 13 6 468 9 460 1.44e-59 203
Msa1043710 AT2G29730.1 28.721 477 302 14 3 461 2 458 8.09e-58 198
Msa1043710 AT3G21780.1 31.590 478 290 13 5 461 3 464 3.15e-57 197
Msa1043710 AT1G07240.1 29.752 484 287 13 3 454 2 464 3.33e-57 197
Msa1043710 AT2G29710.1 28.512 477 303 14 3 461 2 458 1.44e-55 192
Msa1043710 AT2G15480.1 31.218 394 231 10 87 461 104 476 1.19e-52 185
Msa1043710 AT4G34131.1 28.797 507 275 13 3 461 7 475 4.78e-52 183
Msa1043710 AT3G53160.1 31.755 507 261 21 5 461 7 478 3.44e-51 181
Msa1043710 AT2G15480.2 31.111 405 227 11 87 461 104 486 6.49e-51 180
Msa1043710 AT1G10400.1 28.778 483 292 16 3 461 4 458 1.01e-50 179
Msa1043710 AT2G15490.3 31.392 395 229 10 87 461 101 473 1.01e-50 179
Msa1043710 AT2G36770.1 37.884 293 151 6 188 461 204 484 1.21e-50 179
Msa1043710 AT2G15490.1 31.899 395 230 11 87 461 101 476 1.39e-50 179
Msa1043710 AT1G22340.1 31.653 496 274 17 6 464 13 480 1.57e-50 179
Msa1043710 AT2G16890.3 31.336 434 254 12 6 418 9 419 3.91e-50 176
Msa1043710 AT2G36780.1 37.543 293 152 6 188 461 204 484 2.31e-49 176
Msa1043710 AT1G22400.1 27.824 478 281 11 6 447 13 462 4.38e-49 175
Msa1043710 AT4G34138.1 37.269 271 135 8 207 461 223 474 9.28e-49 174
Msa1043710 AT2G36800.1 39.130 276 133 7 207 461 222 483 1.88e-48 174
Msa1043710 AT2G31750.1 29.958 474 267 19 17 464 19 453 2.24e-48 172
Msa1043710 AT2G31750.2 29.958 474 267 19 17 464 19 453 3.80e-48 172
Msa1043710 AT1G73880.1 30.498 482 272 20 6 459 14 460 6.89e-48 172
Msa1043710 AT1G05675.1 27.743 483 294 14 1 462 1 449 1.12e-47 171
Msa1043710 AT2G36760.1 38.971 272 133 8 207 458 223 481 1.28e-47 171
Msa1043710 AT2G36970.1 27.403 489 306 13 6 469 10 474 1.42e-47 171
Msa1043710 AT2G43820.1 29.457 387 200 10 104 461 100 442 8.58e-47 168
Msa1043710 AT3G53150.1 28.927 522 273 17 3 461 19 505 1.12e-46 169
Msa1043710 AT1G22380.1 29.814 483 276 19 2 449 9 463 1.63e-46 168
Msa1043710 AT5G12890.1 32.115 383 223 12 92 448 91 462 5.38e-46 167
Msa1043710 AT1G05680.1 27.066 484 296 15 1 462 1 449 7.67e-46 166
Msa1043710 AT1G22360.1 28.283 495 291 19 6 464 10 476 7.98e-46 166
Msa1043710 AT2G36750.1 36.861 274 142 6 207 461 218 479 1.77e-45 166
Msa1043710 AT1G05560.1 32.782 363 202 10 107 454 105 440 5.42e-45 164
Msa1043710 AT2G43840.2 30.108 372 215 11 108 464 104 445 6.68e-45 163
Msa1043710 AT2G43840.1 29.867 375 212 11 108 464 104 445 8.72e-45 163
Msa1043710 AT2G31790.1 29.570 372 222 8 108 461 103 452 1.03e-44 162
Msa1043710 AT1G05560.2 36.594 276 154 6 184 454 231 490 1.25e-44 164
Msa1043710 AT1G78270.1 30.105 475 273 17 6 447 13 461 1.69e-44 163
Msa1043710 AT3G46680.1 34.503 342 199 11 125 461 124 445 4.70e-44 160
Msa1043710 AT1G24100.1 29.184 490 267 17 6 461 11 454 3.49e-43 159
Msa1043710 AT5G05870.1 31.594 345 210 8 125 462 126 451 3.78e-43 159
Msa1043710 AT5G59580.1 31.250 368 226 9 109 469 106 453 5.33e-43 158
Msa1043710 AT3G46690.1 29.707 478 286 18 1 461 1 445 7.78e-43 157
Msa1043710 AT3G46650.1 29.310 464 285 14 1 461 5 428 1.27e-42 156
Msa1043710 AT2G36790.1 37.631 287 144 7 207 472 222 494 1.90e-42 157
Msa1043710 AT5G05880.1 30.532 357 225 8 109 461 107 444 3.17e-42 156
Msa1043710 AT3G11340.1 32.172 373 219 14 99 461 92 440 4.00e-42 155
Msa1043710 AT5G59590.1 27.447 470 299 13 3 461 7 445 5.79e-42 155
Msa1043710 AT4G34135.1 27.364 497 296 13 3 461 8 477 8.20e-42 155
Msa1043710 AT3G02100.1 25.934 482 292 15 6 461 13 455 2.14e-41 154
Msa1043710 AT3G55700.1 30.532 357 224 10 109 461 110 446 3.34e-41 153
Msa1043710 AT5G03490.1 28.247 485 294 15 3 468 16 465 3.98e-41 153
Msa1043710 AT5G05860.1 36.486 296 169 6 169 462 166 444 5.32e-41 152
Msa1043710 AT3G46670.1 27.706 462 279 13 28 468 24 451 5.69e-41 152
Msa1043710 AT1G22370.2 30.252 476 270 20 6 449 13 458 6.92e-41 152
Msa1043710 AT4G15550.1 36.759 253 141 8 208 456 227 464 1.11e-40 152
Msa1043710 AT1G22360.2 27.071 495 285 19 6 464 10 464 1.43e-40 152
Msa1043710 AT3G46660.1 37.288 236 132 5 234 468 238 458 1.44e-40 151
Msa1043710 AT2G30140.2 29.362 470 284 17 6 462 13 447 1.57e-40 151
Msa1043710 AT2G30140.1 29.299 471 284 17 6 462 13 448 1.74e-40 151
Msa1043710 AT3G46700.1 31.755 359 221 8 109 462 102 441 2.30e-40 150
Msa1043710 AT5G65550.1 28.485 495 254 21 5 455 8 446 3.58e-40 150
Msa1043710 AT4G15490.1 28.989 376 228 11 106 464 112 465 1.29e-39 149
Msa1043710 AT2G30150.2 28.778 483 270 18 6 461 13 448 1.97e-39 148
Msa1043710 AT2G28080.1 30.612 343 199 10 125 454 143 459 7.40e-39 147
Msa1043710 AT1G05530.1 35.135 259 149 6 208 458 200 447 1.68e-38 145
Msa1043710 AT2G22590.1 28.998 469 285 18 5 451 14 456 1.91e-38 146
Msa1043710 AT2G26480.1 32.682 358 198 11 125 470 117 443 3.96e-38 144
Msa1043710 AT5G17050.1 25.910 467 309 10 6 461 12 452 7.79e-38 144
Msa1043710 AT2G30150.1 28.814 472 262 18 17 461 8 432 8.44e-38 143
Msa1043710 AT2G23260.1 30.573 314 184 8 159 458 153 446 9.78e-38 144
Msa1043710 AT3G46720.1 31.593 364 207 10 109 462 106 437 1.25e-37 143
Msa1043710 AT5G49690.1 29.211 469 270 17 2 446 6 436 1.49e-37 143
Msa1043710 AT4G15500.1 29.144 374 229 9 106 464 109 461 1.93e-37 143
Msa1043710 AT4G15480.1 29.839 372 226 12 108 464 126 477 2.94e-37 143
Msa1043710 AT1G30530.1 28.255 361 234 7 97 454 101 439 4.18e-37 142
Msa1043710 AT5G38010.1 29.973 367 215 9 109 461 111 449 5.93e-37 141
Msa1043710 AT1G51210.1 33.755 237 133 4 207 440 217 432 1.36e-36 140
Msa1043710 AT3G55710.1 30.471 361 227 9 109 462 108 451 2.61e-36 140
Msa1043710 AT1G22370.1 33.452 281 155 7 181 449 28 288 4.87e-36 135
Msa1043710 AT3G21560.1 27.540 374 235 11 106 464 119 471 5.67e-36 139
Msa1043710 AT5G05890.1 30.556 324 194 6 146 461 148 448 6.42e-36 139
Msa1043710 AT1G06000.1 32.692 260 163 5 207 461 177 429 7.30e-35 135
Msa1043710 AT5G05900.1 29.006 362 219 10 109 461 111 443 1.21e-34 135
Msa1043710 AT2G23250.1 28.526 312 194 7 159 461 140 431 3.45e-34 133
Msa1043710 AT5G38040.1 32.812 256 152 5 208 461 208 445 6.48e-33 130
Msa1043710 AT4G14090.1 27.397 365 230 11 100 454 105 444 1.02e-32 129
Msa1043710 AT5G17040.1 31.579 247 149 4 208 454 202 428 1.59e-31 126
Msa1043710 AT5G17040.2 31.579 247 149 4 208 454 100 326 2.70e-31 123
Msa1043710 AT5G17030.1 34.171 199 111 3 256 454 266 444 4.49e-31 125
Msa1043710 AT3G22250.1 29.330 358 195 15 109 434 103 434 8.05e-29 119
Msa1043710 AT1G64910.1 25.506 494 296 15 1 472 1 444 3.61e-28 116
Msa1043710 AT5G37950.2 30.325 277 165 8 109 379 83 337 6.66e-27 111
Msa1043710 AT5G37950.1 29.474 285 163 8 109 379 83 343 8.53e-26 108
Msa1043710 AT5G53990.1 33.333 186 111 2 259 442 244 418 8.84e-25 107
Msa1043710 AT5G54010.1 33.690 187 111 2 259 443 250 425 1.27e-24 106
Msa1043710 AT3G29630.1 26.030 461 284 20 1 443 1 422 3.59e-24 105
Msa1043710 AT5G54060.1 29.630 270 172 7 187 452 198 453 6.87e-24 104
Msa1043710 AT4G27570.1 24.672 458 294 13 5 446 6 428 8.72e-24 103
Msa1043710 AT1G64920.1 31.982 222 126 5 259 472 244 448 1.17e-22 100
Msa1043710 AT3G29630.2 32.447 188 113 3 259 443 220 396 1.38e-22 100
Msa1043710 AT4G27560.1 30.088 226 143 3 238 461 231 443 2.05e-22 100
Msa1043710 AT1G50580.1 31.551 187 115 2 259 443 245 420 2.18e-22 99.8
Msa1043710 AT2G22930.1 31.285 179 110 2 267 443 252 419 2.20e-21 96.7
Msa1043710 AT4G09500.1 31.461 178 109 2 267 442 227 393 6.83e-21 95.1
Msa1043710 AT4G09500.2 31.461 178 109 2 267 442 252 418 7.12e-21 95.1

Find 113 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTAAGCTCCTTAACTTTA+AGG 0.097922 7_2:+1890393 Msa1043710:CDS
TGAGCAATCATAAATTCTTA+TGG 0.212533 7_2:+1890975 Msa1043710:CDS
GGTAGGTCCTTAGGGTTTAC+AGG 0.238720 7_2:-1890302 None:intergenic
AGCACTCAAGTGGAGAAATT+TGG 0.283485 7_2:+1891480 Msa1043710:CDS
CATACCATTGCCACTATTAT+CGG 0.285123 7_2:-1890837 None:intergenic
GTATCTTGTGGTAGGTCCTT+AGG 0.289219 7_2:-1890311 None:intergenic
GAGCAATCATAAATTCTTAT+GGG 0.339561 7_2:+1890976 Msa1043710:CDS
CAAATTGATGAGTTGGCTAT+TGG 0.341229 7_2:+1890944 Msa1043710:CDS
ATTCACATTGTTATTGTTCC+AGG 0.343572 7_2:+1890110 Msa1043710:CDS
GTGTTACTGCAAGCTGGATT+TGG 0.346777 7_2:-1890346 None:intergenic
AAAGTGTAGTTGATGTTTGA+TGG 0.357868 7_2:-1890272 None:intergenic
AAAAGATTCCATTATGTTGA+TGG 0.360992 7_2:+1890695 Msa1043710:CDS
AGGCCAAGAGTTAATGAAAA+TGG 0.363895 7_2:+1891304 Msa1043710:CDS
GATTATTGTTAATAGCTTCC+TGG 0.365188 7_2:+1890718 Msa1043710:CDS
ACTTGCTTCATTCCCACACT+TGG 0.367088 7_2:+1890209 Msa1043710:CDS
TTGGCCTCACTCCCACCTTT+AGG 0.369531 7_2:-1891288 None:intergenic
CTTAAGGCCAGATGTAAATA+TGG 0.370471 7_2:-1890377 None:intergenic
GGAAAGGATAGAGGTTTCTA+AGG 0.372305 7_2:+1891333 Msa1043710:CDS
CAATAATCCCATCAACATAA+TGG 0.378658 7_2:-1890703 None:intergenic
AAGGACTCCCATTGTGGCAT+TGG 0.383595 7_2:+1890412 Msa1043710:CDS
TATCTTGTGGTAGGTCCTTA+GGG 0.391023 7_2:-1890310 None:intergenic
GCACTTATATTTGCCAAAGT+TGG 0.393918 7_2:+1890532 Msa1043710:CDS
CCTTAAAGTTAAGGAGCTTA+AGG 0.394182 7_2:-1890393 None:intergenic
CTCTCTGCCATATTTACATC+TGG 0.394346 7_2:+1890370 Msa1043710:CDS
TGATGAGTTGGCTATTGGTT+TGG 0.403139 7_2:+1890949 Msa1043710:CDS
CCAGGTTGTGTACCACTTCA+TGG 0.411488 7_2:+1890605 Msa1043710:CDS
TAAGGTGATCAAGTGTCTAA+TGG 0.413053 7_2:+1891351 Msa1043710:CDS
AAGCAAGTGACATGAAAGTT+TGG 0.414528 7_2:-1890194 None:intergenic
TTTGTTCCCGTTCCGAAAAT+GGG 0.414848 7_2:-1890812 None:intergenic
AGCTTCCTGGAAATTGAAAA+AGG 0.418872 7_2:+1890731 Msa1043710:CDS
CACCAACTGATCTGTGACTA+AGG 0.420925 7_2:-1891147 None:intergenic
GACAATGTGGTAGCTGCAGC+AGG 0.421563 7_2:-1890506 None:intergenic
CATTTGATCTATCTTGAGCT+TGG 0.429438 7_2:-1890643 None:intergenic
ACACAACCTGGTACTTGAAC+AGG 0.432757 7_2:-1890593 None:intergenic
TGGCATTGTGGAAAGGATAG+AGG 0.434615 7_2:+1891324 Msa1043710:CDS
ACAAGAACAAATTGATGAGT+TGG 0.442846 7_2:+1890937 Msa1043710:CDS
GTTCCGAAAATGGGCCCAAC+AGG 0.444634 7_2:-1890803 None:intergenic
GATGTTTCCTCATCCAACTT+TGG 0.445543 7_2:-1890545 None:intergenic
CTTGAGTGCTAATTGAGAAA+TGG 0.451815 7_2:-1891467 None:intergenic
GACTCCCATTGTGGCATTGG+TGG 0.454285 7_2:+1890415 Msa1043710:CDS
TTGTTATTGTTCCAGGTGCT+TGG 0.455364 7_2:+1890117 Msa1043710:CDS
AATGGGAGTCCTTAAAGTTA+AGG 0.463945 7_2:-1890402 None:intergenic
CTAGAGCCTGTTCAAGTACC+AGG 0.468948 7_2:+1890587 Msa1043710:CDS
AAAGATTCCATTATGTTGAT+GGG 0.472404 7_2:+1890696 Msa1043710:CDS
ATAAAAGCATTGACAGAAGA+AGG 0.474051 7_2:+1890758 Msa1043710:CDS
GGCCCAACAGGATACACATC+AGG 0.476432 7_2:-1890791 None:intergenic
CGATAATAGTGGCAATGGTA+TGG 0.482560 7_2:+1890838 Msa1043710:CDS
AATGAGTTTGAGGCACTTGA+GGG 0.485554 7_2:-1890236 None:intergenic
AGTTTGAAGGAATGAGTTTG+AGG 0.487907 7_2:-1890246 None:intergenic
GCACCACTGGCTGAACTACT+TGG 0.489927 7_2:-1891010 None:intergenic
AATAACCATTCCTTGCTCCT+TGG 0.490345 7_2:-1891098 None:intergenic
ACCCTGATGTGTATCCTGTT+GGG 0.491876 7_2:+1890789 Msa1043710:CDS
AACCCTGATGTGTATCCTGT+TGG 0.492144 7_2:+1890788 Msa1043710:CDS
CTTGCTTCATTCCCACACTT+GGG 0.497988 7_2:+1890210 Msa1043710:CDS
CCATGGTAGTATCTTGTGGT+AGG 0.498863 7_2:-1890319 None:intergenic
GGAACAAAATCCGATAATAG+TGG 0.506941 7_2:+1890827 Msa1043710:CDS
GAATGAGTTTGAGGCACTTG+AGG 0.507010 7_2:-1890237 None:intergenic
AAGCTGGATTTGGCTTTCCA+TGG 0.507453 7_2:-1890336 None:intergenic
TCAACCACCAATGCCACAAT+GGG 0.515599 7_2:-1890419 None:intergenic
GAGAGAGTGTTACTGCAAGC+TGG 0.516939 7_2:-1890352 None:intergenic
CCATGAAGTGGTACACAACC+TGG 0.519385 7_2:-1890605 None:intergenic
AAGGAATGGTTATTCCATCA+TGG 0.519522 7_2:+1891107 Msa1043710:CDS
CTTTCCATGGTAGTATCTTG+TGG 0.521657 7_2:-1890323 None:intergenic
TGTCTAATGGAAGGAGAAGA+AGG 0.528581 7_2:+1891364 Msa1043710:CDS
CTGGTACTTGAACAGGCTCT+AGG 0.530294 7_2:-1890586 None:intergenic
ATCCTTAGTCACAGATCAGT+TGG 0.531678 7_2:+1891145 Msa1043710:CDS
ATATTTGCCAAAGTTGGATG+AGG 0.541639 7_2:+1890538 Msa1043710:CDS
ATGAAAATGGCATTGTGGAA+AGG 0.542313 7_2:+1891317 Msa1043710:CDS
TGCTGAAAGATATGCACCAC+TGG 0.543619 7_2:-1891023 None:intergenic
TTTCTCAATTAGCACTCAAG+TGG 0.543687 7_2:+1891470 Msa1043710:CDS
GCATTGACAGAAGAAGGAAC+TGG 0.549406 7_2:+1890764 Msa1043710:CDS
AAATCCGATAATAGTGGCAA+TGG 0.552853 7_2:+1890833 Msa1043710:CDS
TCTTCCACCTGTAAACCCTA+AGG 0.555602 7_2:+1890295 Msa1043710:CDS
TCAATCTGAGGTGCCCATGA+TGG 0.556427 7_2:-1891121 None:intergenic
GATTCTTGAGTCACTGTGGA+TGG 0.557579 7_2:+1891170 Msa1043710:CDS
GAAACTGCGCAATAATATGA+AGG 0.559953 7_2:+1891390 Msa1043710:CDS
AACTTTAAGGACTCCCATTG+TGG 0.560317 7_2:+1890406 Msa1043710:CDS
TGTGTTGAGTGAGGGCCTAA+AGG 0.566432 7_2:+1891273 Msa1043710:CDS
CTAATGCACTCAAAGAAGAC+GGG 0.568081 7_2:+1891431 Msa1043710:CDS
AGGAATGGTTATTCCATCAT+GGG 0.572193 7_2:+1891108 Msa1043710:CDS
CTTAGTCACAGATCAGTTGG+TGG 0.578739 7_2:+1891148 Msa1043710:CDS
TCGGAGAGAACCAAGGAGCA+AGG 0.579106 7_2:+1891088 Msa1043710:CDS
ATCAACCACCAATGCCACAA+TGG 0.580844 7_2:-1890420 None:intergenic
TATAGATCATGTCCATGAAG+TGG 0.584131 7_2:-1890617 None:intergenic
TCTAATGCACTCAAAGAAGA+CGG 0.588952 7_2:+1891430 Msa1043710:CDS
GTGATCAAGTGTCTAATGGA+AGG 0.591188 7_2:+1891355 Msa1043710:CDS
AAGTGACATGAAAGTTTGGA+TGG 0.597231 7_2:-1890190 None:intergenic
ACTTGAGGGTGACCCAAGTG+TGG 0.601113 7_2:-1890222 None:intergenic
GAGAACCAAGGAGCAAGGAA+TGG 0.601538 7_2:+1891093 Msa1043710:CDS
CACCATGCATCACACTCTCA+AGG 0.609037 7_2:-1891201 None:intergenic
ATTCTCTGCTCAGCAAACAA+AGG 0.616989 7_2:-1891241 None:intergenic
AAATGACTATACCAAGCACC+TGG 0.623983 7_2:-1890128 None:intergenic
AACAAAGGCCATGTGATCAG+TGG 0.624030 7_2:-1891226 None:intergenic
TGTTTGATGGAAGAGTTTGA+AGG 0.628221 7_2:-1890259 None:intergenic
GTTCTCTCCGAAAACCCAGA+TGG 0.630337 7_2:-1891076 None:intergenic
AGGGCCTAAAGGTGGGAGTG+AGG 0.638619 7_2:+1891284 Msa1043710:CDS
GTTGAGTGAGGGCCTAAAGG+TGG 0.639784 7_2:+1891276 Msa1043710:CDS
CTTGAGGGTGACCCAAGTGT+GGG 0.640219 7_2:-1890221 None:intergenic
AGTTAATGAAAATGGCATTG+TGG 0.644248 7_2:+1891312 Msa1043710:CDS
ATCCTTGAGAGTGTGATGCA+TGG 0.646636 7_2:+1891199 Msa1043710:CDS
GCACCAAGTAGTTCAGCCAG+TGG 0.649453 7_2:+1891007 Msa1043710:CDS
ATGGTGTGCCACTGATCACA+TGG 0.651799 7_2:+1891218 Msa1043710:CDS
AGGTCCTTAGGGTTTACAGG+TGG 0.661576 7_2:-1890299 None:intergenic
GAATGCAGTTGTGTTGAGTG+AGG 0.662775 7_2:+1891264 Msa1043710:CDS
ACAATGTGGTAGCTGCAGCA+GGG 0.665176 7_2:-1890505 None:intergenic
GCCCAACAGGATACACATCA+GGG 0.666365 7_2:-1890790 None:intergenic
TGACTAAGGATTTCAATCTG+AGG 0.668634 7_2:-1891133 None:intergenic
TTGAGTGAGGGCCTAAAGGT+GGG 0.673423 7_2:+1891277 Msa1043710:CDS
AATGCAGTTGTGTTGAGTGA+GGG 0.685062 7_2:+1891265 Msa1043710:CDS
ATATAAGTGCAAAGACAATG+TGG 0.696089 7_2:-1890519 None:intergenic
CCTACCACAAGATACTACCA+TGG 0.699515 7_2:+1890319 Msa1043710:CDS
GGTGGATTCTTGAGTCACTG+TGG 0.728107 7_2:+1891166 Msa1043710:CDS
ATGGTATGGAGTGTTTGACA+TGG 0.728872 7_2:+1890852 Msa1043710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAAAGATTCCATTATGTTGA+TGG + chr7_2:1890695-1890714 Msa1043710:CDS 25.0%
! AAAGATTCCATTATGTTGAT+GGG + chr7_2:1890696-1890715 Msa1043710:CDS 25.0%
!!! TCAGTTTTGTATGTTTCTTT+TGG + chr7_2:1890896-1890915 Msa1043710:CDS 25.0%
! TGAGCAATCATAAATTCTTA+TGG + chr7_2:1890975-1890994 Msa1043710:CDS 25.0%
! GAGCAATCATAAATTCTTAT+GGG + chr7_2:1890976-1890995 Msa1043710:CDS 25.0%
! AAAAGATTCCATTATGTTGA+TGG + chr7_2:1890695-1890714 Msa1043710:CDS 25.0%
! AAAGATTCCATTATGTTGAT+GGG + chr7_2:1890696-1890715 Msa1043710:CDS 25.0%
!!! TCAGTTTTGTATGTTTCTTT+TGG + chr7_2:1890896-1890915 Msa1043710:CDS 25.0%
! TGAGCAATCATAAATTCTTA+TGG + chr7_2:1890975-1890994 Msa1043710:CDS 25.0%
! GAGCAATCATAAATTCTTAT+GGG + chr7_2:1890976-1890995 Msa1043710:CDS 25.0%
! ATTCACATTGTTATTGTTCC+AGG + chr7_2:1890110-1890129 Msa1043710:CDS 30.0%
! AAAGTGTAGTTGATGTTTGA+TGG - chr7_2:1890275-1890294 None:intergenic 30.0%
ATATAAGTGCAAAGACAATG+TGG - chr7_2:1890522-1890541 None:intergenic 30.0%
CAATAATCCCATCAACATAA+TGG - chr7_2:1890706-1890725 None:intergenic 30.0%
GATTATTGTTAATAGCTTCC+TGG + chr7_2:1890718-1890737 Msa1043710:CDS 30.0%
! TCTTCTGTCAATGCTTTTAT+AGG - chr7_2:1890758-1890777 None:intergenic 30.0%
!! ATAAAAGCATTGACAGAAGA+AGG + chr7_2:1890758-1890777 Msa1043710:CDS 30.0%
!! TTGTATGTTTCTTTTGGAAG+TGG + chr7_2:1890902-1890921 Msa1043710:CDS 30.0%
ACAAGAACAAATTGATGAGT+TGG + chr7_2:1890937-1890956 Msa1043710:CDS 30.0%
!!! ATGCCATTTTCATTAACTCT+TGG - chr7_2:1891310-1891329 None:intergenic 30.0%
AGTTAATGAAAATGGCATTG+TGG + chr7_2:1891312-1891331 Msa1043710:CDS 30.0%
! ATTCACATTGTTATTGTTCC+AGG + chr7_2:1890110-1890129 Msa1043710:CDS 30.0%
! AAAGTGTAGTTGATGTTTGA+TGG - chr7_2:1890275-1890294 None:intergenic 30.0%
ATATAAGTGCAAAGACAATG+TGG - chr7_2:1890522-1890541 None:intergenic 30.0%
CAATAATCCCATCAACATAA+TGG - chr7_2:1890706-1890725 None:intergenic 30.0%
GATTATTGTTAATAGCTTCC+TGG + chr7_2:1890718-1890737 Msa1043710:CDS 30.0%
! TCTTCTGTCAATGCTTTTAT+AGG - chr7_2:1890758-1890777 None:intergenic 30.0%
!! ATAAAAGCATTGACAGAAGA+AGG + chr7_2:1890758-1890777 Msa1043710:CDS 30.0%
!! TTGTATGTTTCTTTTGGAAG+TGG + chr7_2:1890902-1890921 Msa1043710:CDS 30.0%
ACAAGAACAAATTGATGAGT+TGG + chr7_2:1890937-1890956 Msa1043710:CDS 30.0%
!!! ATGCCATTTTCATTAACTCT+TGG - chr7_2:1891310-1891329 None:intergenic 30.0%
AGTTAATGAAAATGGCATTG+TGG + chr7_2:1891312-1891331 Msa1043710:CDS 30.0%
AAGTGACATGAAAGTTTGGA+TGG - chr7_2:1890193-1890212 None:intergenic 35.0%
AAGCAAGTGACATGAAAGTT+TGG - chr7_2:1890197-1890216 None:intergenic 35.0%
AGTTTGAAGGAATGAGTTTG+AGG - chr7_2:1890249-1890268 None:intergenic 35.0%
TGTTTGATGGAAGAGTTTGA+AGG - chr7_2:1890262-1890281 None:intergenic 35.0%
CTTAAGGCCAGATGTAAATA+TGG - chr7_2:1890380-1890399 None:intergenic 35.0%
CCTTAAAGTTAAGGAGCTTA+AGG - chr7_2:1890396-1890415 None:intergenic 35.0%
CCTTAAGCTCCTTAACTTTA+AGG + chr7_2:1890393-1890412 Msa1043710:CDS 35.0%
AATGGGAGTCCTTAAAGTTA+AGG - chr7_2:1890405-1890424 None:intergenic 35.0%
!! TGAAGCACTAGATTTTGCTA+AGG + chr7_2:1890454-1890473 Msa1043710:CDS 35.0%
GCACTTATATTTGCCAAAGT+TGG + chr7_2:1890532-1890551 Msa1043710:CDS 35.0%
ATATTTGCCAAAGTTGGATG+AGG + chr7_2:1890538-1890557 Msa1043710:CDS 35.0%
TATAGATCATGTCCATGAAG+TGG - chr7_2:1890620-1890639 None:intergenic 35.0%
CATTTGATCTATCTTGAGCT+TGG - chr7_2:1890646-1890665 None:intergenic 35.0%
AGCTTCCTGGAAATTGAAAA+AGG + chr7_2:1890731-1890750 Msa1043710:CDS 35.0%
!!! TAGGACCTTTTTCAATTTCC+AGG - chr7_2:1890739-1890758 None:intergenic 35.0%
GGAACAAAATCCGATAATAG+TGG + chr7_2:1890827-1890846 Msa1043710:CDS 35.0%
AAATCCGATAATAGTGGCAA+TGG + chr7_2:1890833-1890852 Msa1043710:CDS 35.0%
CATACCATTGCCACTATTAT+CGG - chr7_2:1890840-1890859 None:intergenic 35.0%
!! TATGTTTCTTTTGGAAGTGG+TGG + chr7_2:1890905-1890924 Msa1043710:CDS 35.0%
! CAAATTGATGAGTTGGCTAT+TGG + chr7_2:1890944-1890963 Msa1043710:CDS 35.0%
! TTTCGCAGTTTTTACCATCT+GGG + chr7_2:1891062-1891081 Msa1043710:CDS 35.0%
! GTTTTTACCATCTGGGTTTT+CGG + chr7_2:1891069-1891088 Msa1043710:CDS 35.0%
AAGGAATGGTTATTCCATCA+TGG + chr7_2:1891107-1891126 Msa1043710:CDS 35.0%
AGGAATGGTTATTCCATCAT+GGG + chr7_2:1891108-1891127 Msa1043710:CDS 35.0%
TGACTAAGGATTTCAATCTG+AGG - chr7_2:1891136-1891155 None:intergenic 35.0%
AGGCCAAGAGTTAATGAAAA+TGG + chr7_2:1891304-1891323 Msa1043710:CDS 35.0%
ATGAAAATGGCATTGTGGAA+AGG + chr7_2:1891317-1891336 Msa1043710:CDS 35.0%
TAAGGTGATCAAGTGTCTAA+TGG + chr7_2:1891351-1891370 Msa1043710:CDS 35.0%
GAAACTGCGCAATAATATGA+AGG + chr7_2:1891390-1891409 Msa1043710:CDS 35.0%
TCTAATGCACTCAAAGAAGA+CGG + chr7_2:1891430-1891449 Msa1043710:CDS 35.0%
CTTGAGTGCTAATTGAGAAA+TGG - chr7_2:1891470-1891489 None:intergenic 35.0%
TTTCTCAATTAGCACTCAAG+TGG + chr7_2:1891470-1891489 Msa1043710:CDS 35.0%
AAGTGACATGAAAGTTTGGA+TGG - chr7_2:1890193-1890212 None:intergenic 35.0%
AAGCAAGTGACATGAAAGTT+TGG - chr7_2:1890197-1890216 None:intergenic 35.0%
AGTTTGAAGGAATGAGTTTG+AGG - chr7_2:1890249-1890268 None:intergenic 35.0%
TGTTTGATGGAAGAGTTTGA+AGG - chr7_2:1890262-1890281 None:intergenic 35.0%
CTTAAGGCCAGATGTAAATA+TGG - chr7_2:1890380-1890399 None:intergenic 35.0%
CCTTAAAGTTAAGGAGCTTA+AGG - chr7_2:1890396-1890415 None:intergenic 35.0%
CCTTAAGCTCCTTAACTTTA+AGG + chr7_2:1890393-1890412 Msa1043710:CDS 35.0%
AATGGGAGTCCTTAAAGTTA+AGG - chr7_2:1890405-1890424 None:intergenic 35.0%
!! TGAAGCACTAGATTTTGCTA+AGG + chr7_2:1890454-1890473 Msa1043710:CDS 35.0%
GCACTTATATTTGCCAAAGT+TGG + chr7_2:1890532-1890551 Msa1043710:CDS 35.0%
ATATTTGCCAAAGTTGGATG+AGG + chr7_2:1890538-1890557 Msa1043710:CDS 35.0%
TATAGATCATGTCCATGAAG+TGG - chr7_2:1890620-1890639 None:intergenic 35.0%
CATTTGATCTATCTTGAGCT+TGG - chr7_2:1890646-1890665 None:intergenic 35.0%
AGCTTCCTGGAAATTGAAAA+AGG + chr7_2:1890731-1890750 Msa1043710:CDS 35.0%
!!! TAGGACCTTTTTCAATTTCC+AGG - chr7_2:1890739-1890758 None:intergenic 35.0%
GGAACAAAATCCGATAATAG+TGG + chr7_2:1890827-1890846 Msa1043710:CDS 35.0%
AAATCCGATAATAGTGGCAA+TGG + chr7_2:1890833-1890852 Msa1043710:CDS 35.0%
CATACCATTGCCACTATTAT+CGG - chr7_2:1890840-1890859 None:intergenic 35.0%
!! TATGTTTCTTTTGGAAGTGG+TGG + chr7_2:1890905-1890924 Msa1043710:CDS 35.0%
! CAAATTGATGAGTTGGCTAT+TGG + chr7_2:1890944-1890963 Msa1043710:CDS 35.0%
! TTTCGCAGTTTTTACCATCT+GGG + chr7_2:1891062-1891081 Msa1043710:CDS 35.0%
! GTTTTTACCATCTGGGTTTT+CGG + chr7_2:1891069-1891088 Msa1043710:CDS 35.0%
AAGGAATGGTTATTCCATCA+TGG + chr7_2:1891107-1891126 Msa1043710:CDS 35.0%
AGGAATGGTTATTCCATCAT+GGG + chr7_2:1891108-1891127 Msa1043710:CDS 35.0%
TGACTAAGGATTTCAATCTG+AGG - chr7_2:1891136-1891155 None:intergenic 35.0%
AGGCCAAGAGTTAATGAAAA+TGG + chr7_2:1891304-1891323 Msa1043710:CDS 35.0%
ATGAAAATGGCATTGTGGAA+AGG + chr7_2:1891317-1891336 Msa1043710:CDS 35.0%
TAAGGTGATCAAGTGTCTAA+TGG + chr7_2:1891351-1891370 Msa1043710:CDS 35.0%
GAAACTGCGCAATAATATGA+AGG + chr7_2:1891390-1891409 Msa1043710:CDS 35.0%
TCTAATGCACTCAAAGAAGA+CGG + chr7_2:1891430-1891449 Msa1043710:CDS 35.0%
CTTGAGTGCTAATTGAGAAA+TGG - chr7_2:1891470-1891489 None:intergenic 35.0%
TTTCTCAATTAGCACTCAAG+TGG + chr7_2:1891470-1891489 Msa1043710:CDS 35.0%
! TTGTTATTGTTCCAGGTGCT+TGG + chr7_2:1890117-1890136 Msa1043710:CDS 40.0%
AAATGACTATACCAAGCACC+TGG - chr7_2:1890131-1890150 None:intergenic 40.0%
! AATGAGTTTGAGGCACTTGA+GGG - chr7_2:1890239-1890258 None:intergenic 40.0%
TATCTTGTGGTAGGTCCTTA+GGG - chr7_2:1890313-1890332 None:intergenic 40.0%
CTTTCCATGGTAGTATCTTG+TGG - chr7_2:1890326-1890345 None:intergenic 40.0%
CTCTCTGCCATATTTACATC+TGG + chr7_2:1890370-1890389 Msa1043710:CDS 40.0%
! AACTTTAAGGACTCCCATTG+TGG + chr7_2:1890406-1890425 Msa1043710:CDS 40.0%
GATGTTTCCTCATCCAACTT+TGG - chr7_2:1890548-1890567 None:intergenic 40.0%
TTTGTTCCCGTTCCGAAAAT+GGG - chr7_2:1890815-1890834 None:intergenic 40.0%
! TTTTGTTCCCGTTCCGAAAA+TGG - chr7_2:1890816-1890835 None:intergenic 40.0%
CGATAATAGTGGCAATGGTA+TGG + chr7_2:1890838-1890857 Msa1043710:CDS 40.0%
! ATGGTATGGAGTGTTTGACA+TGG + chr7_2:1890852-1890871 Msa1043710:CDS 40.0%
! TGATGAGTTGGCTATTGGTT+TGG + chr7_2:1890949-1890968 Msa1043710:CDS 40.0%
! CTTTCGCAGTTTTTACCATC+TGG + chr7_2:1891061-1891080 Msa1043710:CDS 40.0%
AATAACCATTCCTTGCTCCT+TGG - chr7_2:1891101-1891120 None:intergenic 40.0%
ATCCTTAGTCACAGATCAGT+TGG + chr7_2:1891145-1891164 Msa1043710:CDS 40.0%
ATTCTCTGCTCAGCAAACAA+AGG - chr7_2:1891244-1891263 None:intergenic 40.0%
AATGCAGTTGTGTTGAGTGA+GGG + chr7_2:1891265-1891284 Msa1043710:CDS 40.0%
GGAAAGGATAGAGGTTTCTA+AGG + chr7_2:1891333-1891352 Msa1043710:CDS 40.0%
GTGATCAAGTGTCTAATGGA+AGG + chr7_2:1891355-1891374 Msa1043710:CDS 40.0%
TGTCTAATGGAAGGAGAAGA+AGG + chr7_2:1891364-1891383 Msa1043710:CDS 40.0%
CTAATGCACTCAAAGAAGAC+GGG + chr7_2:1891431-1891450 Msa1043710:CDS 40.0%
AGCACTCAAGTGGAGAAATT+TGG + chr7_2:1891480-1891499 Msa1043710:CDS 40.0%
! TTGTTATTGTTCCAGGTGCT+TGG + chr7_2:1890117-1890136 Msa1043710:CDS 40.0%
AAATGACTATACCAAGCACC+TGG - chr7_2:1890131-1890150 None:intergenic 40.0%
! AATGAGTTTGAGGCACTTGA+GGG - chr7_2:1890239-1890258 None:intergenic 40.0%
TATCTTGTGGTAGGTCCTTA+GGG - chr7_2:1890313-1890332 None:intergenic 40.0%
CTTTCCATGGTAGTATCTTG+TGG - chr7_2:1890326-1890345 None:intergenic 40.0%
CTCTCTGCCATATTTACATC+TGG + chr7_2:1890370-1890389 Msa1043710:CDS 40.0%
! AACTTTAAGGACTCCCATTG+TGG + chr7_2:1890406-1890425 Msa1043710:CDS 40.0%
GATGTTTCCTCATCCAACTT+TGG - chr7_2:1890548-1890567 None:intergenic 40.0%
TTTGTTCCCGTTCCGAAAAT+GGG - chr7_2:1890815-1890834 None:intergenic 40.0%
! TTTTGTTCCCGTTCCGAAAA+TGG - chr7_2:1890816-1890835 None:intergenic 40.0%
CGATAATAGTGGCAATGGTA+TGG + chr7_2:1890838-1890857 Msa1043710:CDS 40.0%
! ATGGTATGGAGTGTTTGACA+TGG + chr7_2:1890852-1890871 Msa1043710:CDS 40.0%
! TGATGAGTTGGCTATTGGTT+TGG + chr7_2:1890949-1890968 Msa1043710:CDS 40.0%
! CTTTCGCAGTTTTTACCATC+TGG + chr7_2:1891061-1891080 Msa1043710:CDS 40.0%
AATAACCATTCCTTGCTCCT+TGG - chr7_2:1891101-1891120 None:intergenic 40.0%
ATCCTTAGTCACAGATCAGT+TGG + chr7_2:1891145-1891164 Msa1043710:CDS 40.0%
ATTCTCTGCTCAGCAAACAA+AGG - chr7_2:1891244-1891263 None:intergenic 40.0%
AATGCAGTTGTGTTGAGTGA+GGG + chr7_2:1891265-1891284 Msa1043710:CDS 40.0%
GGAAAGGATAGAGGTTTCTA+AGG + chr7_2:1891333-1891352 Msa1043710:CDS 40.0%
GTGATCAAGTGTCTAATGGA+AGG + chr7_2:1891355-1891374 Msa1043710:CDS 40.0%
TGTCTAATGGAAGGAGAAGA+AGG + chr7_2:1891364-1891383 Msa1043710:CDS 40.0%
CTAATGCACTCAAAGAAGAC+GGG + chr7_2:1891431-1891450 Msa1043710:CDS 40.0%
AGCACTCAAGTGGAGAAATT+TGG + chr7_2:1891480-1891499 Msa1043710:CDS 40.0%
ACTTGCTTCATTCCCACACT+TGG + chr7_2:1890209-1890228 Msa1043710:CDS 45.0%
CTTGCTTCATTCCCACACTT+GGG + chr7_2:1890210-1890229 Msa1043710:CDS 45.0%
! GAATGAGTTTGAGGCACTTG+AGG - chr7_2:1890240-1890259 None:intergenic 45.0%
TCTTCCACCTGTAAACCCTA+AGG + chr7_2:1890295-1890314 Msa1043710:CDS 45.0%
GTATCTTGTGGTAGGTCCTT+AGG - chr7_2:1890314-1890333 None:intergenic 45.0%
CCATGGTAGTATCTTGTGGT+AGG - chr7_2:1890322-1890341 None:intergenic 45.0%
CCTACCACAAGATACTACCA+TGG + chr7_2:1890319-1890338 Msa1043710:CDS 45.0%
!! AAGCTGGATTTGGCTTTCCA+TGG - chr7_2:1890339-1890358 None:intergenic 45.0%
! GTGTTACTGCAAGCTGGATT+TGG - chr7_2:1890349-1890368 None:intergenic 45.0%
TCAACCACCAATGCCACAAT+GGG - chr7_2:1890422-1890441 None:intergenic 45.0%
ATCAACCACCAATGCCACAA+TGG - chr7_2:1890423-1890442 None:intergenic 45.0%
ACACAACCTGGTACTTGAAC+AGG - chr7_2:1890596-1890615 None:intergenic 45.0%
! GCATTGACAGAAGAAGGAAC+TGG + chr7_2:1890764-1890783 Msa1043710:CDS 45.0%
AACCCTGATGTGTATCCTGT+TGG + chr7_2:1890788-1890807 Msa1043710:CDS 45.0%
ACCCTGATGTGTATCCTGTT+GGG + chr7_2:1890789-1890808 Msa1043710:CDS 45.0%
! TATCCTGTTGGGCCCATTTT+CGG + chr7_2:1890800-1890819 Msa1043710:CDS 45.0%
TGCTGAAAGATATGCACCAC+TGG - chr7_2:1891026-1891045 None:intergenic 45.0%
CACCAACTGATCTGTGACTA+AGG - chr7_2:1891150-1891169 None:intergenic 45.0%
CTTAGTCACAGATCAGTTGG+TGG + chr7_2:1891148-1891167 Msa1043710:CDS 45.0%
GATTCTTGAGTCACTGTGGA+TGG + chr7_2:1891170-1891189 Msa1043710:CDS 45.0%
! ATCCTTGAGAGTGTGATGCA+TGG + chr7_2:1891199-1891218 Msa1043710:CDS 45.0%
AACAAAGGCCATGTGATCAG+TGG - chr7_2:1891229-1891248 None:intergenic 45.0%
GAATGCAGTTGTGTTGAGTG+AGG + chr7_2:1891264-1891283 Msa1043710:CDS 45.0%
TGGCATTGTGGAAAGGATAG+AGG + chr7_2:1891324-1891343 Msa1043710:CDS 45.0%
ACTTGCTTCATTCCCACACT+TGG + chr7_2:1890209-1890228 Msa1043710:CDS 45.0%
CTTGCTTCATTCCCACACTT+GGG + chr7_2:1890210-1890229 Msa1043710:CDS 45.0%
! GAATGAGTTTGAGGCACTTG+AGG - chr7_2:1890240-1890259 None:intergenic 45.0%
TCTTCCACCTGTAAACCCTA+AGG + chr7_2:1890295-1890314 Msa1043710:CDS 45.0%
GTATCTTGTGGTAGGTCCTT+AGG - chr7_2:1890314-1890333 None:intergenic 45.0%
CCATGGTAGTATCTTGTGGT+AGG - chr7_2:1890322-1890341 None:intergenic 45.0%
CCTACCACAAGATACTACCA+TGG + chr7_2:1890319-1890338 Msa1043710:CDS 45.0%
!! AAGCTGGATTTGGCTTTCCA+TGG - chr7_2:1890339-1890358 None:intergenic 45.0%
! GTGTTACTGCAAGCTGGATT+TGG - chr7_2:1890349-1890368 None:intergenic 45.0%
TCAACCACCAATGCCACAAT+GGG - chr7_2:1890422-1890441 None:intergenic 45.0%
ATCAACCACCAATGCCACAA+TGG - chr7_2:1890423-1890442 None:intergenic 45.0%
ACACAACCTGGTACTTGAAC+AGG - chr7_2:1890596-1890615 None:intergenic 45.0%
! GCATTGACAGAAGAAGGAAC+TGG + chr7_2:1890764-1890783 Msa1043710:CDS 45.0%
AACCCTGATGTGTATCCTGT+TGG + chr7_2:1890788-1890807 Msa1043710:CDS 45.0%
ACCCTGATGTGTATCCTGTT+GGG + chr7_2:1890789-1890808 Msa1043710:CDS 45.0%
! TATCCTGTTGGGCCCATTTT+CGG + chr7_2:1890800-1890819 Msa1043710:CDS 45.0%
TGCTGAAAGATATGCACCAC+TGG - chr7_2:1891026-1891045 None:intergenic 45.0%
CACCAACTGATCTGTGACTA+AGG - chr7_2:1891150-1891169 None:intergenic 45.0%
CTTAGTCACAGATCAGTTGG+TGG + chr7_2:1891148-1891167 Msa1043710:CDS 45.0%
GATTCTTGAGTCACTGTGGA+TGG + chr7_2:1891170-1891189 Msa1043710:CDS 45.0%
! ATCCTTGAGAGTGTGATGCA+TGG + chr7_2:1891199-1891218 Msa1043710:CDS 45.0%
AACAAAGGCCATGTGATCAG+TGG - chr7_2:1891229-1891248 None:intergenic 45.0%
GAATGCAGTTGTGTTGAGTG+AGG + chr7_2:1891264-1891283 Msa1043710:CDS 45.0%
TGGCATTGTGGAAAGGATAG+AGG + chr7_2:1891324-1891343 Msa1043710:CDS 45.0%
AGGTCCTTAGGGTTTACAGG+TGG - chr7_2:1890302-1890321 None:intergenic 50.0%
GGTAGGTCCTTAGGGTTTAC+AGG - chr7_2:1890305-1890324 None:intergenic 50.0%
!! GAGAGAGTGTTACTGCAAGC+TGG - chr7_2:1890355-1890374 None:intergenic 50.0%
AAGGACTCCCATTGTGGCAT+TGG + chr7_2:1890412-1890431 Msa1043710:CDS 50.0%
ACAATGTGGTAGCTGCAGCA+GGG - chr7_2:1890508-1890527 None:intergenic 50.0%
CTGGTACTTGAACAGGCTCT+AGG - chr7_2:1890589-1890608 None:intergenic 50.0%
CTAGAGCCTGTTCAAGTACC+AGG + chr7_2:1890587-1890606 Msa1043710:CDS 50.0%
CCATGAAGTGGTACACAACC+TGG - chr7_2:1890608-1890627 None:intergenic 50.0%
CCAGGTTGTGTACCACTTCA+TGG + chr7_2:1890605-1890624 Msa1043710:CDS 50.0%
GCCCAACAGGATACACATCA+GGG - chr7_2:1890793-1890812 None:intergenic 50.0%
! TGTTGGGCCCATTTTCGGAA+CGG + chr7_2:1890805-1890824 Msa1043710:CDS 50.0%
GTTCTCTCCGAAAACCCAGA+TGG - chr7_2:1891079-1891098 None:intergenic 50.0%
! TGGGTTTTCGGAGAGAACCA+AGG + chr7_2:1891081-1891100 Msa1043710:CDS 50.0%
GAGAACCAAGGAGCAAGGAA+TGG + chr7_2:1891093-1891112 Msa1043710:CDS 50.0%
! TCAATCTGAGGTGCCCATGA+TGG - chr7_2:1891124-1891143 None:intergenic 50.0%
! GGTGGATTCTTGAGTCACTG+TGG + chr7_2:1891166-1891185 Msa1043710:CDS 50.0%
CACCATGCATCACACTCTCA+AGG - chr7_2:1891204-1891223 None:intergenic 50.0%
! ATGGTGTGCCACTGATCACA+TGG + chr7_2:1891218-1891237 Msa1043710:CDS 50.0%
TGTGTTGAGTGAGGGCCTAA+AGG + chr7_2:1891273-1891292 Msa1043710:CDS 50.0%
TTGAGTGAGGGCCTAAAGGT+GGG + chr7_2:1891277-1891296 Msa1043710:CDS 50.0%
AGGTCCTTAGGGTTTACAGG+TGG - chr7_2:1890302-1890321 None:intergenic 50.0%
GGTAGGTCCTTAGGGTTTAC+AGG - chr7_2:1890305-1890324 None:intergenic 50.0%
!! GAGAGAGTGTTACTGCAAGC+TGG - chr7_2:1890355-1890374 None:intergenic 50.0%
AAGGACTCCCATTGTGGCAT+TGG + chr7_2:1890412-1890431 Msa1043710:CDS 50.0%
ACAATGTGGTAGCTGCAGCA+GGG - chr7_2:1890508-1890527 None:intergenic 50.0%
CTGGTACTTGAACAGGCTCT+AGG - chr7_2:1890589-1890608 None:intergenic 50.0%
CTAGAGCCTGTTCAAGTACC+AGG + chr7_2:1890587-1890606 Msa1043710:CDS 50.0%
CCATGAAGTGGTACACAACC+TGG - chr7_2:1890608-1890627 None:intergenic 50.0%
CCAGGTTGTGTACCACTTCA+TGG + chr7_2:1890605-1890624 Msa1043710:CDS 50.0%
GCCCAACAGGATACACATCA+GGG - chr7_2:1890793-1890812 None:intergenic 50.0%
! TGTTGGGCCCATTTTCGGAA+CGG + chr7_2:1890805-1890824 Msa1043710:CDS 50.0%
GTTCTCTCCGAAAACCCAGA+TGG - chr7_2:1891079-1891098 None:intergenic 50.0%
! TGGGTTTTCGGAGAGAACCA+AGG + chr7_2:1891081-1891100 Msa1043710:CDS 50.0%
GAGAACCAAGGAGCAAGGAA+TGG + chr7_2:1891093-1891112 Msa1043710:CDS 50.0%
! TCAATCTGAGGTGCCCATGA+TGG - chr7_2:1891124-1891143 None:intergenic 50.0%
! GGTGGATTCTTGAGTCACTG+TGG + chr7_2:1891166-1891185 Msa1043710:CDS 50.0%
CACCATGCATCACACTCTCA+AGG - chr7_2:1891204-1891223 None:intergenic 50.0%
! ATGGTGTGCCACTGATCACA+TGG + chr7_2:1891218-1891237 Msa1043710:CDS 50.0%
TGTGTTGAGTGAGGGCCTAA+AGG + chr7_2:1891273-1891292 Msa1043710:CDS 50.0%
TTGAGTGAGGGCCTAAAGGT+GGG + chr7_2:1891277-1891296 Msa1043710:CDS 50.0%
CTTGAGGGTGACCCAAGTGT+GGG - chr7_2:1890224-1890243 None:intergenic 55.0%
ACTTGAGGGTGACCCAAGTG+TGG - chr7_2:1890225-1890244 None:intergenic 55.0%
! GACTCCCATTGTGGCATTGG+TGG + chr7_2:1890415-1890434 Msa1043710:CDS 55.0%
GACAATGTGGTAGCTGCAGC+AGG - chr7_2:1890509-1890528 None:intergenic 55.0%
GGCCCAACAGGATACACATC+AGG - chr7_2:1890794-1890813 None:intergenic 55.0%
GTTCCGAAAATGGGCCCAAC+AGG - chr7_2:1890806-1890825 None:intergenic 55.0%
! GTTGGGCCCATTTTCGGAAC+GGG + chr7_2:1890806-1890825 Msa1043710:CDS 55.0%
GCACCAAGTAGTTCAGCCAG+TGG + chr7_2:1891007-1891026 Msa1043710:CDS 55.0%
! GCACCACTGGCTGAACTACT+TGG - chr7_2:1891013-1891032 None:intergenic 55.0%
TCGGAGAGAACCAAGGAGCA+AGG + chr7_2:1891088-1891107 Msa1043710:CDS 55.0%
GTTGAGTGAGGGCCTAAAGG+TGG + chr7_2:1891276-1891295 Msa1043710:CDS 55.0%
TTGGCCTCACTCCCACCTTT+AGG - chr7_2:1891291-1891310 None:intergenic 55.0%
CTTGAGGGTGACCCAAGTGT+GGG - chr7_2:1890224-1890243 None:intergenic 55.0%
ACTTGAGGGTGACCCAAGTG+TGG - chr7_2:1890225-1890244 None:intergenic 55.0%
! GACTCCCATTGTGGCATTGG+TGG + chr7_2:1890415-1890434 Msa1043710:CDS 55.0%
GACAATGTGGTAGCTGCAGC+AGG - chr7_2:1890509-1890528 None:intergenic 55.0%
GGCCCAACAGGATACACATC+AGG - chr7_2:1890794-1890813 None:intergenic 55.0%
GTTCCGAAAATGGGCCCAAC+AGG - chr7_2:1890806-1890825 None:intergenic 55.0%
! GTTGGGCCCATTTTCGGAAC+GGG + chr7_2:1890806-1890825 Msa1043710:CDS 55.0%
GCACCAAGTAGTTCAGCCAG+TGG + chr7_2:1891007-1891026 Msa1043710:CDS 55.0%
! GCACCACTGGCTGAACTACT+TGG - chr7_2:1891013-1891032 None:intergenic 55.0%
TCGGAGAGAACCAAGGAGCA+AGG + chr7_2:1891088-1891107 Msa1043710:CDS 55.0%
GTTGAGTGAGGGCCTAAAGG+TGG + chr7_2:1891276-1891295 Msa1043710:CDS 55.0%
TTGGCCTCACTCCCACCTTT+AGG - chr7_2:1891291-1891310 None:intergenic 55.0%
AGGGCCTAAAGGTGGGAGTG+AGG + chr7_2:1891284-1891303 Msa1043710:CDS 60.0%
AGGGCCTAAAGGTGGGAGTG+AGG + chr7_2:1891284-1891303 Msa1043710:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 1890098 1891516 1890098 ID=Msa1043710;Name=Msa1043710
chr7_2 mRNA 1890098 1891516 1890098 ID=Msa1043710-mRNA-1;Parent=Msa1043710;Name=Msa1043710-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|472
chr7_2 exon 1890098 1891516 1890098 ID=Msa1043710-mRNA-1:exon:395;Parent=Msa1043710-mRNA-1
chr7_2 CDS 1890098 1891516 1890098 ID=Msa1043710-mRNA-1:cds;Parent=Msa1043710-mRNA-1
Gene Sequence

>Msa1043710

ATGGAGAAAACGATTCACATTGTTATTGTTCCAGGTGCTTGGTATAGTCATTTAGTCTCTATTCTTGAATTCTCTAAGCTACTTGTTCAGCTCCATCCAAACTTTCATGTCACTTGCTTCATTCCCACACTTGGGTCACCCTCAAGTGCCTCAAACTCATTCCTTCAAACTCTTCCATCAAACATCAACTACACTTTTCTTCCACCTGTAAACCCTAAGGACCTACCACAAGATACTACCATGGAAAGCCAAATCCAGCTTGCAGTAACACTCTCTCTGCCATATTTACATCTGGCCTTAAGCTCCTTAACTTTAAGGACTCCCATTGTGGCATTGGTGGTTGATTCTTTATCTGCTGAAGCACTAGATTTTGCTAAGGAGTTCAACATGCTGTCTTATATATACTTCCCTGCTGCAGCTACCACATTGTCTTTGCACTTATATTTGCCAAAGTTGGATGAGGAAACATCATGTGAGTACAGAGATCTCCTAGAGCCTGTTCAAGTACCAGGTTGTGTACCACTTCATGGACATGATCTATATAACCAAGCTCAAGATAGATCAAATGAAGCTTACAAATTCTTGATCGAACGTGTTAAAAGATTCCATTATGTTGATGGGATTATTGTTAATAGCTTCCTGGAAATTGAAAAAGGTCCTATAAAAGCATTGACAGAAGAAGGAACTGGAAACCCTGATGTGTATCCTGTTGGGCCCATTTTCGGAACGGGAACAAAATCCGATAATAGTGGCAATGGTATGGAGTGTTTGACATGGTTAGATAAACAACAACATTGTTCAGTTTTGTATGTTTCTTTTGGAAGTGGTGGTGCGCTTTCACAAGAACAAATTGATGAGTTGGCTATTGGTTTGGAATTGAGCAATCATAAATTCTTATGGGTTGTAAGAGCACCAAGTAGTTCAGCCAGTGGTGCATATCTTTCAGCACAAAACAATGTTGATCTTTCGCAGTTTTTACCATCTGGGTTTTCGGAGAGAACCAAGGAGCAAGGAATGGTTATTCCATCATGGGCACCTCAGATTGAAATCCTTAGTCACAGATCAGTTGGTGGATTCTTGAGTCACTGTGGATGGAATTCAATCCTTGAGAGTGTGATGCATGGTGTGCCACTGATCACATGGCCTTTGTTTGCTGAGCAGAGAATGAATGCAGTTGTGTTGAGTGAGGGCCTAAAGGTGGGAGTGAGGCCAAGAGTTAATGAAAATGGCATTGTGGAAAGGATAGAGGTTTCTAAGGTGATCAAGTGTCTAATGGAAGGAGAAGAAGGTGAGAAACTGCGCAATAATATGAAGGAATTGAAAGAAGCTTCTTCTAATGCACTCAAAGAAGACGGGTCTTCTAGAAATACCATTTCTCAATTAGCACTCAAGTGGAGAAATTTGGTGCATGAAAACTAG

Protein sequence

>Msa1043710

MEKTIHIVIVPGAWYSHLVSILEFSKLLVQLHPNFHVTCFIPTLGSPSSASNSFLQTLPSNINYTFLPPVNPKDLPQDTTMESQIQLAVTLSLPYLHLALSSLTLRTPIVALVVDSLSAEALDFAKEFNMLSYIYFPAAATTLSLHLYLPKLDEETSCEYRDLLEPVQVPGCVPLHGHDLYNQAQDRSNEAYKFLIERVKRFHYVDGIIVNSFLEIEKGPIKALTEEGTGNPDVYPVGPIFGTGTKSDNSGNGMECLTWLDKQQHCSVLYVSFGSGGALSQEQIDELAIGLELSNHKFLWVVRAPSSSASGAYLSAQNNVDLSQFLPSGFSERTKEQGMVIPSWAPQIEILSHRSVGGFLSHCGWNSILESVMHGVPLITWPLFAEQRMNAVVLSEGLKVGVRPRVNENGIVERIEVSKVIKCLMEGEEGEKLRNNMKELKEASSNALKEDGSSRNTISQLALKWRNLVHEN*