AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1027790

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027790 MtrunA17_Chr7g0247431 96.821 346 11 0 1 346 1 346 0.0 672
Msa1027790 MtrunA17_Chr8g0349091 63.143 350 118 10 1 346 1 343 1.21e-119 348
Msa1027790 MtrunA17_Chr5g0397551 45.455 352 155 14 1 346 1 321 4.14e-74 232
Msa1027790 MtrunA17_Chr8g0386741 40.336 357 196 8 1 346 1 351 3.24e-56 186
Msa1027790 MtrunA17_Chr4g0054661 48.205 195 87 3 89 276 73 260 8.23e-51 172
Msa1027790 MtrunA17_Chr7g0245841 45.690 232 116 3 85 315 56 278 7.13e-49 167
Msa1027790 MtrunA17_Chr1g0179461 43.814 194 100 3 89 273 69 262 1.06e-48 167
Msa1027790 MtrunA17_Chr1g0188211 45.413 218 101 3 88 288 48 264 7.68e-46 159
Msa1027790 MtrunA17_Chr8g0351761 46.445 211 103 3 87 290 69 276 4.32e-42 150
Msa1027790 MtrunA17_Chr4g0056761 47.222 216 104 5 80 285 61 276 5.04e-42 149
Msa1027790 MtrunA17_Chr5g0398621 39.048 210 103 3 89 290 46 238 4.72e-38 136
Msa1027790 MtrunA17_Chr6g0476061 41.096 219 114 4 82 287 44 260 6.59e-36 132
Msa1027790 MtrunA17_Chr7g0274821 39.904 208 115 3 86 292 71 269 3.68e-31 120
Msa1027790 MtrunA17_Chr1g0190011 37.634 186 108 4 89 272 43 222 1.31e-28 113
Msa1027790 MtrunA17_Chr4g0027351 50.000 114 50 5 159 269 21 130 1.51e-24 97.4
Msa1027790 MtrunA17_Chr4g0027371 40.690 145 82 3 146 287 8 151 2.25e-24 99.8
Msa1027790 MtrunA17_Chr4g0027331 44.538 119 61 4 159 273 21 138 2.97e-23 94.0
Msa1027790 MtrunA17_Chr1g0165101 34.804 204 107 6 87 272 83 278 1.64e-22 97.1
Msa1027790 MtrunA17_Chr3g0133051 33.880 183 105 4 127 296 74 253 3.19e-22 95.1
Msa1027790 MtrunA17_Chr6g0476241 36.232 207 114 6 83 288 114 303 7.20e-22 94.4
Msa1027790 MtrunA17_Chr1g0168121 38.514 148 85 2 125 272 40 181 2.73e-19 86.7
Msa1027790 MtrunA17_Chr5g0417581 35.537 121 74 3 148 266 10 128 3.10e-19 84.7
Msa1027790 MtrunA17_Chr4g0027301 38.095 126 75 3 147 269 16 141 4.30e-19 82.8
Msa1027790 MtrunA17_Chr5g0427311 37.795 127 75 3 148 272 71 195 8.88e-18 81.6
Msa1027790 MtrunA17_Chr1g0190051 36.207 174 98 3 127 300 74 234 3.10e-17 81.3
Msa1027790 MtrunA17_Chr3g0112131 39.370 127 71 2 160 283 109 232 7.83e-17 80.1
Msa1027790 MtrunA17_Chr8g0351651 34.375 160 96 3 127 283 86 239 1.04e-15 76.6
Msa1027790 MtrunA17_Chr5g0443311 32.203 177 109 3 127 303 51 216 2.82e-14 72.0
Msa1027790 MtrunA17_Chr5g0398531 32.450 151 96 2 122 272 95 239 1.10e-13 70.9
Msa1027790 MtrunA17_Chr7g0250031 38.938 113 66 1 160 272 87 196 4.32e-13 68.6
Msa1027790 MtrunA17_Chr4g0054651 40.000 115 62 2 160 272 106 215 5.49e-13 68.6
Msa1027790 MtrunA17_Chr3g0086021 34.146 123 72 3 169 288 118 234 1.56e-12 67.4
Msa1027790 MtrunA17_Chr5g0400531 36.641 131 67 5 90 212 121 243 6.56e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1027790 AT2G45850.1 50.139 359 155 9 1 346 1 348 8.22e-89 271
Msa1027790 AT2G45850.2 50.139 359 155 9 1 346 1 348 8.22e-89 271
Msa1027790 AT3G61310.1 46.594 367 162 12 1 346 1 354 9.45e-77 240
Msa1027790 AT2G45850.3 50.530 283 123 5 1 272 1 277 3.07e-66 210
Msa1027790 AT1G63470.1 44.765 277 133 6 88 346 104 378 6.39e-61 200
Msa1027790 AT1G63480.2 39.459 370 191 11 1 346 1 361 6.57e-58 191
Msa1027790 AT1G63480.1 39.459 370 191 11 1 346 1 361 6.57e-58 191
Msa1027790 AT1G63480.5 39.560 364 187 11 7 346 1 355 8.54e-57 188
Msa1027790 AT1G63480.7 39.560 364 187 11 7 346 1 355 8.54e-57 188
Msa1027790 AT1G63480.4 39.560 364 187 11 7 346 1 355 8.54e-57 188
Msa1027790 AT1G63480.3 39.560 364 187 11 7 346 1 355 8.54e-57 188
Msa1027790 AT1G63480.6 39.560 364 187 11 7 346 1 355 8.54e-57 188
Msa1027790 AT4G12080.1 40.636 283 132 8 84 343 84 353 1.41e-53 180
Msa1027790 AT4G25320.1 44.019 209 105 2 84 280 81 289 1.31e-50 174
Msa1027790 AT2G33620.1 49.741 193 85 6 86 273 94 279 1.08e-48 167
Msa1027790 AT2G33620.4 49.741 193 85 6 86 273 94 279 1.08e-48 167
Msa1027790 AT2G33620.2 49.741 193 85 6 86 273 94 279 1.08e-48 167
Msa1027790 AT2G33620.3 49.741 193 85 6 86 273 94 279 1.08e-48 167
Msa1027790 AT4G17950.1 42.083 240 99 8 86 295 128 357 7.71e-46 162
Msa1027790 AT5G51590.1 41.818 220 96 3 88 275 77 296 4.71e-45 159
Msa1027790 AT4G22770.2 44.231 208 104 4 88 284 71 277 4.49e-43 152
Msa1027790 AT4G22770.1 44.231 208 104 4 88 284 71 277 4.49e-43 152
Msa1027790 AT5G62260.1 40.930 215 109 4 88 285 75 288 8.01e-43 153
Msa1027790 AT5G62260.3 40.930 215 109 4 88 285 75 288 8.01e-43 153
Msa1027790 AT5G46640.1 45.909 220 96 5 88 292 101 312 1.58e-41 149
Msa1027790 AT5G62260.2 41.624 197 97 4 88 267 75 270 8.43e-39 139
Msa1027790 AT3G04590.1 40.488 205 93 4 86 278 102 289 3.66e-38 138
Msa1027790 AT3G04590.2 41.038 212 82 4 86 278 102 289 3.86e-37 138
Msa1027790 AT4G00200.2 42.661 218 101 4 89 294 56 261 8.54e-36 132
Msa1027790 AT4G00200.1 42.661 218 101 4 89 294 56 261 8.54e-36 132
Msa1027790 AT5G49700.1 33.140 172 105 4 127 291 56 224 8.77e-21 90.9
Msa1027790 AT3G60870.1 36.301 146 85 3 127 272 59 196 2.58e-20 89.4
Msa1027790 AT2G36560.1 31.731 208 116 6 80 285 51 234 1.05e-17 84.7
Msa1027790 AT4G14465.1 34.759 187 113 4 127 313 67 244 1.49e-17 82.0
Msa1027790 AT1G76500.1 35.119 168 93 4 114 272 60 220 3.03e-17 81.6
Msa1027790 AT1G14490.2 33.673 196 104 7 106 291 11 190 6.30e-17 79.3
Msa1027790 AT1G14490.1 33.333 174 98 5 128 291 6 171 8.24e-17 78.6
Msa1027790 AT3G55560.1 43.860 114 62 1 160 273 118 229 1.29e-16 79.7
Msa1027790 AT2G45430.1 34.807 181 103 6 127 300 89 261 2.28e-15 76.3
Msa1027790 AT2G35270.1 36.486 148 84 3 127 272 78 217 1.31e-14 73.6
Msa1027790 AT5G28590.1 37.143 140 63 3 154 293 27 141 1.79e-14 72.0
Msa1027790 AT3G04570.1 35.714 154 85 3 127 272 80 227 1.94e-14 73.6
Msa1027790 AT4G12050.1 38.095 147 84 3 127 272 118 258 2.08e-14 73.6
Msa1027790 AT4G22810.1 36.242 149 86 3 127 272 105 247 1.65e-13 70.9
Msa1027790 AT2G42940.1 31.548 168 106 3 127 291 53 214 4.76e-13 68.6
Msa1027790 AT4G17800.1 39.130 115 63 2 160 272 112 221 1.31e-11 65.1
Msa1027790 AT4G35390.1 33.333 156 93 4 127 277 63 212 1.32e-11 65.1
Msa1027790 AT1G20900.1 35.119 168 94 3 114 272 73 234 1.83e-11 64.7

Find 137 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCGTGAGCCTTCAATTTC+AGG 0.181190 7_1:+60372640 Msa1027790:CDS
TGATGATTGGGAGCTTTCTT+TGG 0.202344 7_1:+60373819 Msa1027790:CDS
CCTCGGTTGGGTTGCGATAT+CGG 0.207340 7_1:-60367461 None:intergenic
ATAAAATTATTTGTCATAAA+TGG 0.211539 7_1:-60374348 None:intergenic
GGACTAAGTATTTCCCTTCT+TGG 0.226477 7_1:+60373417 Msa1027790:CDS
ATCTGGTTGCATAAAATTCT+AGG 0.229823 7_1:-60367547 None:intergenic
CCTCCACCCATGATTTCATT+AGG 0.234838 7_1:+60374193 Msa1027790:three_prime_UTR
CAATGAAAGCAAATTGAAAA+AGG 0.258224 7_1:-60367652 None:intergenic
AAACAACAATTGGCTTCTTT+TGG 0.260196 7_1:+60369463 Msa1027790:CDS
GGTTCTGATGGCCGCGTCTT+TGG 0.261926 7_1:+60373438 Msa1027790:CDS
GATGATTGGGAGCTTTCTTT+GGG 0.283569 7_1:+60373820 Msa1027790:CDS
TGTTACGTGCCTACTGAAAA+TGG 0.318751 7_1:+60373372 Msa1027790:CDS
AGAGGAAGGCCGAGGAAATA+TGG 0.336868 7_1:+60369322 Msa1027790:CDS
CTCCACCCATGATTTCATTA+GGG 0.341000 7_1:+60374194 Msa1027790:three_prime_UTR
ATTGGTAAGGATACATTTCA+TGG 0.346145 7_1:+60374271 Msa1027790:three_prime_UTR
GGTCATACTGTTGTTCCGTC+TGG 0.360946 7_1:+60369280 Msa1027790:CDS
AGCATCGCGTCAGATGGATA+TGG 0.362505 7_1:+60374000 Msa1027790:CDS
GGTTACTTTCTCTCTCTAGA+AGG 0.371488 7_1:-60367519 None:intergenic
CAGCCTGACATGCTCATTAT+CGG 0.372820 7_1:-60373351 None:intergenic
TACTTTCTCTCTCCTCGGTT+GGG 0.377297 7_1:-60367473 None:intergenic
CAGAGAGTACTACCTGGTTC+TGG 0.381741 7_1:+60369103 Msa1027790:CDS
AATTTGTTCACAGGTGGAAT+TGG 0.384759 7_1:+60367736 Msa1027790:five_prime_UTR
TGCACACAAAAGTCCTTATC+TGG 0.391496 7_1:-60367564 None:intergenic
GAGTTGATGTCTGGTTCAGC+TGG 0.406727 7_1:+60371658 Msa1027790:CDS
GTCATACTGTTGTTCCGTCT+GGG 0.408582 7_1:+60369281 Msa1027790:CDS
CATATAGTAAGATGCAGAAT+TGG 0.410161 7_1:-60369077 None:intergenic
TGTTGTTTCTTCCCACTCCC+AGG 0.412423 7_1:-60369448 None:intergenic
TGCTGCTGACCAAGGACTTA+AGG 0.412506 7_1:-60373981 None:intergenic
GAAGGTTTCATGTTCCTGAT+TGG 0.423100 7_1:+60374253 Msa1027790:three_prime_UTR
GGACGCCCTCTCCCTCGTTT+CGG 0.424030 7_1:-60369424 None:intergenic
CTTTCTTTGGGGTAGATTGA+AGG 0.434019 7_1:+60373832 Msa1027790:CDS
TCACGATTGTAGGTGATGAT+TGG 0.434323 7_1:+60373806 Msa1027790:intron
TTGTAAGCAATAATATCAAA+AGG 0.434547 7_1:-60367775 None:intergenic
ATTTAGTAGTGATGAAAGAA+TGG 0.435779 7_1:+60374108 Msa1027790:three_prime_UTR
ATACTTTCTCTCTCCTCGGT+TGG 0.440668 7_1:-60367474 None:intergenic
TGAGAACCCTAATGAAATCA+TGG 0.444366 7_1:-60374200 None:intergenic
GTTACTTTCTCTCTCTAGAA+GGG 0.445102 7_1:-60367518 None:intergenic
GAAATGTATCCTTACCAATC+AGG 0.447763 7_1:-60374267 None:intergenic
CATGGATCACGGGGACCATA+TGG 0.448828 7_1:+60369048 Msa1027790:exon
ATTTCCCTTCTTGGTTCTGA+TGG 0.452001 7_1:+60373426 Msa1027790:CDS
CACGATTGTAGGTGATGATT+GGG 0.453280 7_1:+60373807 Msa1027790:intron
CAACCTCATCCTTAAGTCCT+TGG 0.455300 7_1:+60373972 Msa1027790:CDS
TTACTAGATGGTGTTGGACT+TGG 0.455387 7_1:-60369376 None:intergenic
CCTAGCTTCAATTTGTTCAC+AGG 0.457595 7_1:+60367727 Msa1027790:five_prime_UTR
TGTTGCTGCCAGTCCCGTCC+AGG 0.459424 7_1:+60373482 Msa1027790:CDS
CTGGATTGAAATGGTAGATT+GGG 0.463800 7_1:-60369175 None:intergenic
TAAAATAACCTGGACGGGAC+TGG 0.464159 7_1:-60373490 None:intergenic
CCACCAATGCTGGATTGAAA+TGG 0.467476 7_1:-60369184 None:intergenic
GGCGGTCCGAAACGAGGGAG+AGG 0.467856 7_1:+60369418 Msa1027790:CDS
TGCATAAAATTCTAGGGCTA+TGG 0.470647 7_1:-60367540 None:intergenic
TCATAGTTTCTTGTTAAAGA+AGG 0.472475 7_1:+60369009 Msa1027790:five_prime_UTR
AAAGTAAATGCATGGATCAC+GGG 0.473691 7_1:+60369038 Msa1027790:exon
CAGAATTGGATAACGCCATA+TGG 0.473958 7_1:-60369063 None:intergenic
GCTGGATTGAAATGGTAGAT+TGG 0.474439 7_1:-60369176 None:intergenic
TTAGTATATTTGAATATTGG+AGG 0.475558 7_1:+60368986 Msa1027790:five_prime_UTR
ATGTCTGGTTCAGCTGGGAC+GGG 0.475635 7_1:+60371664 Msa1027790:CDS
CGCTGACAGAGTTGTGTCAT+TGG 0.476854 7_1:+60369345 Msa1027790:CDS
CAATCCAGCATTGGTGGTGG+TGG 0.477009 7_1:+60369190 Msa1027790:CDS
TTTCCGATAATGAGCATGTC+AGG 0.479255 7_1:+60373348 Msa1027790:CDS
AGCTTGCTCTATTCTGATGT+TGG 0.480650 7_1:-60374137 None:intergenic
CCAACACCATCTAGTAATCC+TGG 0.482215 7_1:+60369382 Msa1027790:CDS
GTTGTTTCTTCCCACTCCCA+GGG 0.482907 7_1:-60369447 None:intergenic
CGCGTCTTTGGTGGAGCAGT+TGG 0.485980 7_1:+60373450 Msa1027790:CDS
ACTACCACCACCACCAATGC+TGG 0.491763 7_1:-60369194 None:intergenic
GTCTTTGGTGGAGCAGTTGG+TGG 0.493504 7_1:+60373453 Msa1027790:CDS
GATGTCTGGTTCAGCTGGGA+CGG 0.495190 7_1:+60371663 Msa1027790:CDS
CCATTTCAATCCAGCATTGG+TGG 0.497348 7_1:+60369184 Msa1027790:CDS
TCTGATGGCCGCGTCTTTGG+TGG 0.502729 7_1:+60373441 Msa1027790:CDS
TTTCATGTTCCTGATTGGTA+AGG 0.506847 7_1:+60374258 Msa1027790:three_prime_UTR
CGCGGCCATCAGAACCAAGA+AGG 0.508032 7_1:-60373431 None:intergenic
AGGTGGCACTCTCAAATATG+AGG 0.514903 7_1:+60372660 Msa1027790:CDS
GGCATTTGAAAGTAAATGCA+TGG 0.517767 7_1:+60369030 Msa1027790:exon
AGCTTCAATTTGTTCACAGG+TGG 0.518347 7_1:+60367730 Msa1027790:five_prime_UTR
AGAGTGCCACCTGAAATTGA+AGG 0.519251 7_1:-60372649 None:intergenic
GTCAGCAGCATCGCGTCAGA+TGG 0.520208 7_1:+60373994 Msa1027790:CDS
ATATATACTTTCTCTCTCCT+CGG 0.522920 7_1:-60367478 None:intergenic
CTTAGAGTGTTCAAATGAGA+TGG 0.523221 7_1:+60374426 Msa1027790:three_prime_UTR
GAATATAAAATAACCTGGAC+GGG 0.525441 7_1:-60373495 None:intergenic
TCTGGTTGCATAAAATTCTA+GGG 0.528169 7_1:-60367546 None:intergenic
TTTCGGACCGCCTTGCGTCA+CGG 0.531390 7_1:-60369407 None:intergenic
TCATATTTACAATATTGTGT+TGG 0.533823 7_1:+60374400 Msa1027790:three_prime_UTR
AAAGGAAGAGAGGAAGGCCG+AGG 0.541174 7_1:+60369314 Msa1027790:CDS
AACACTACCGCTAGAATCAT+CGG 0.542072 7_1:+60369228 Msa1027790:CDS
GAGACTGTGAAAAGGAAGAG+AGG 0.545044 7_1:+60369304 Msa1027790:CDS
CTACCATTTCAATCCAGCAT+TGG 0.548911 7_1:+60369181 Msa1027790:CDS
TCAGGTTGTGCTCCAGAACC+AGG 0.551315 7_1:-60369115 None:intergenic
TGTAAGCAATAATATCAAAA+GGG 0.552189 7_1:-60367774 None:intergenic
CAAGGACTTAAGGATGAGGT+TGG 0.552528 7_1:-60373971 None:intergenic
TTTCAATCCAGCATTGGTGG+TGG 0.552966 7_1:+60369187 Msa1027790:CDS
GAAAGTAAATGCATGGATCA+CGG 0.553146 7_1:+60369037 Msa1027790:exon
GAGTGGGAAGAAACAACAAT+TGG 0.556408 7_1:+60369453 Msa1027790:CDS
GAAATGCTATTCAGTGCAGC+TGG 0.557516 7_1:-60373929 None:intergenic
CCTAATGAAATCATGGGTGG+AGG 0.564457 7_1:-60374193 None:intergenic
CCTGTGAACAAATTGAAGCT+AGG 0.565629 7_1:-60367727 None:intergenic
CTGTGAAAAGGAAGAGAGGA+AGG 0.568746 7_1:+60369308 Msa1027790:CDS
CATGTCATCTACATTGCAAG+TGG 0.576379 7_1:+60371697 Msa1027790:CDS
TCATCGGCAATTTCATCTCA+AGG 0.576639 7_1:+60369244 Msa1027790:CDS
GGCTCCTCACGGAACCGAGA+TGG 0.579641 7_1:+60373393 Msa1027790:CDS
TCTCATTTGAACACTCTAAG+TGG 0.582614 7_1:-60374423 None:intergenic
AGAATATAAAATAACCTGGA+CGG 0.583629 7_1:-60373496 None:intergenic
ACGGTTCCAGGATTACTAGA+TGG 0.584014 7_1:-60369388 None:intergenic
GCGGCCATCAGAACCAAGAA+GGG 0.584159 7_1:-60373430 None:intergenic
CTGTCAGCGCCATATTTCCT+CGG 0.584925 7_1:-60369331 None:intergenic
GCGGTCCGAAACGAGGGAGA+GGG 0.589994 7_1:+60369419 Msa1027790:CDS
CGTCTGGGGAGACTGTGAAA+AGG 0.590596 7_1:+60369296 Msa1027790:CDS
GCATTAAATCAATGTCAGCA+TGG 0.592021 7_1:-60374030 None:intergenic
TGACGCGATGCTGCTGACCA+AGG 0.593942 7_1:-60373989 None:intergenic
CGTGAGCCTTCAATTTCAGG+TGG 0.598119 7_1:+60372643 Msa1027790:CDS
CCAGGATTACTAGATGGTGT+TGG 0.598387 7_1:-60369382 None:intergenic
CATTAAATCAATGTCAGCAT+GGG 0.598597 7_1:-60374029 None:intergenic
TCCTCACGGAACCGAGATGG+TGG 0.600178 7_1:+60373396 Msa1027790:CDS
CTCGGCGAAACATGTAACTC+AGG 0.601454 7_1:-60369133 None:intergenic
GGTGGTGGTGGTAGTAACAT+TGG 0.610075 7_1:+60369202 Msa1027790:CDS
AATCCTGGAACCGTGACGCA+AGG 0.612484 7_1:+60369397 Msa1027790:CDS
GAGAACCCTAATGAAATCAT+GGG 0.613235 7_1:-60374199 None:intergenic
TCATACTGTTGTTCCGTCTG+GGG 0.616551 7_1:+60369282 Msa1027790:CDS
ACGGGACTGGCAGCAACAAG+CGG 0.620950 7_1:-60373477 None:intergenic
TTGTTTCTTCCCACTCCCAG+GGG 0.621601 7_1:-60369446 None:intergenic
GAAAGCTCAGAGGATGCAGA+AGG 0.626942 7_1:+60373872 Msa1027790:CDS
CTACTGAAAATGGCTCCTCA+CGG 0.628279 7_1:+60373382 Msa1027790:CDS
AAATACTTAGTCCACCATCT+CGG 0.629124 7_1:-60373407 None:intergenic
AGTTGATGTCTGGTTCAGCT+GGG 0.632427 7_1:+60371659 Msa1027790:CDS
TGACCAAGGACTTAAGGATG+AGG 0.635165 7_1:-60373975 None:intergenic
AAGTAAATGCATGGATCACG+GGG 0.639754 7_1:+60369039 Msa1027790:exon
ATGATTGGGAGCTTTCTTTG+GGG 0.643354 7_1:+60373821 Msa1027790:CDS
GCTGTTGAATCAGATCATCA+AGG 0.649232 7_1:+60373896 Msa1027790:CDS
AACCCTAATGAAATCATGGG+TGG 0.650732 7_1:-60374196 None:intergenic
TCTCAAGGTGTCAATGTGAG+TGG 0.652035 7_1:+60369259 Msa1027790:CDS
CTTGCAATGTAGATGACATG+AGG 0.652776 7_1:-60371694 None:intergenic
CAACTGCTCCACCAAAGACG+CGG 0.658039 7_1:-60373449 None:intergenic
GCTGACATTGATTTAATGCG+TGG 0.670344 7_1:+60374034 Msa1027790:CDS
TTAGACAGTTGATTAAAACT+CGG 0.670482 7_1:-60369151 None:intergenic
ATGCAGCAGAGAGTACTACC+TGG 0.672500 7_1:+60369097 Msa1027790:CDS
TCCACCATCTCGGTTCCGTG+AGG 0.687156 7_1:-60373397 None:intergenic
TGTTTCTTCCCACTCCCAGG+GGG 0.696825 7_1:-60369445 None:intergenic
CCTGGAACCGTGACGCAAGG+CGG 0.700364 7_1:+60369400 Msa1027790:CDS
GAAATTGCCGATGATTCTAG+CGG 0.710270 7_1:-60369235 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGATAAACAAAAAAAAAAT+GGG - chr7_1:60368639-60368658 None:intergenic 10.0%
!!! TTTTTAGTATATTTGAATAT+TGG + chr7_1:60368983-60369002 Msa1027790:five_prime_UTR 10.0%
!! ATTTAAATAGGTAAAATATA+AGG - chr7_1:60372080-60372099 None:intergenic 10.0%
!!! AAGTTGATATTTATTTAAAT+AGG - chr7_1:60372092-60372111 None:intergenic 10.0%
!! ATATATACATTTATCTTAAA+AGG + chr7_1:60372294-60372313 Msa1027790:intron 10.0%
!! ATAAAATTATTTGTCATAAA+TGG - chr7_1:60374351-60374370 None:intergenic 10.0%
!! GAAGATAAACAAAAAAAAAA+TGG - chr7_1:60368640-60368659 None:intergenic 15.0%
!!! TTTGAATCAATTTTTCAAAT+TGG + chr7_1:60369563-60369582 Msa1027790:intron 15.0%
!! TGTATATCTTCTTATTATTA+TGG + chr7_1:60370204-60370223 Msa1027790:intron 15.0%
!! ACTAATCAGTATAAATATTT+AGG - chr7_1:60370319-60370338 None:intergenic 15.0%
!!! AACTTACATTGAATTTTTAT+TGG + chr7_1:60370368-60370387 Msa1027790:intron 15.0%
!!! ACTTACATTGAATTTTTATT+GGG + chr7_1:60370369-60370388 Msa1027790:intron 15.0%
!! TATAAAAAAACAAAAACAAC+TGG + chr7_1:60370440-60370459 Msa1027790:intron 15.0%
!!! ATAAGTATGATTGTTTTTAA+GGG + chr7_1:60370649-60370668 Msa1027790:intron 15.0%
!!! TCATTTTAAATTATGAATGA+AGG + chr7_1:60371159-60371178 Msa1027790:intron 15.0%
!!! CATTTTAAATTATGAATGAA+GGG + chr7_1:60371160-60371179 Msa1027790:intron 15.0%
!! AAATCTGATTACAATTAAAT+TGG + chr7_1:60371183-60371202 Msa1027790:intron 15.0%
!!! TTTTTTTCTTTCTATTAACT+TGG + chr7_1:60371734-60371753 Msa1027790:intron 15.0%
!!! TTTTATATGTTGTTAACTTT+GGG + chr7_1:60371774-60371793 Msa1027790:intron 15.0%
!! TAATTAATCAATAACTATGA+GGG - chr7_1:60372771-60372790 None:intergenic 15.0%
!! TTAATTAATCAATAACTATG+AGG - chr7_1:60372772-60372791 None:intergenic 15.0%
!!! TACAATTTAAGAATATTTTG+TGG + chr7_1:60372825-60372844 Msa1027790:intron 15.0%
!! ATATGTTGTTAATTGTTATA+AGG + chr7_1:60373261-60373280 Msa1027790:intron 15.0%
!! TATTGAAAAATGGAAAAGAA+TGG - chr7_1:60367630-60367649 None:intergenic 20.0%
!! AATGAAAGCAAATTGAAAAA+GGG - chr7_1:60367654-60367673 None:intergenic 20.0%
!! TGTAAGCAATAATATCAAAA+GGG - chr7_1:60367777-60367796 None:intergenic 20.0%
!! TTGTAAGCAATAATATCAAA+AGG - chr7_1:60367778-60367797 None:intergenic 20.0%
!!! TTGTGTTTAAGGTTTATTAT+TGG + chr7_1:60368332-60368351 Msa1027790:intron 20.0%
!! TTGAATATAATCACATGTAT+TGG - chr7_1:60368431-60368450 None:intergenic 20.0%
!! TTTGTTTATCTTCTACTTTA+TGG + chr7_1:60368647-60368666 Msa1027790:intron 20.0%
!! AGAGTATAATGACAAATTTA+AGG - chr7_1:60368941-60368960 None:intergenic 20.0%
!! TTAGTATATTTGAATATTGG+AGG + chr7_1:60368986-60369005 Msa1027790:five_prime_UTR 20.0%
!!! AAGGTTGTGTTTAAAATATA+TGG + chr7_1:60369710-60369729 Msa1027790:intron 20.0%
!!! GTATGTTTAAGCTTTATAAA+GGG - chr7_1:60369951-60369970 None:intergenic 20.0%
!!! TGTATGTTTAAGCTTTATAA+AGG - chr7_1:60369952-60369971 None:intergenic 20.0%
!! TATGAAAAAGCTGAAATATA+TGG + chr7_1:60370012-60370031 Msa1027790:intron 20.0%
!!! CATAAGTATGATTGTTTTTA+AGG + chr7_1:60370648-60370667 Msa1027790:intron 20.0%
!!! CTGTTCTCTAAATTTAATTT+TGG + chr7_1:60370971-60370990 Msa1027790:intron 20.0%
!! TAATGACATGAATATCAATT+TGG + chr7_1:60371040-60371059 Msa1027790:intron 20.0%
!!! ACATTTAAGTTCAAATGATT+TGG + chr7_1:60371078-60371097 Msa1027790:intron 20.0%
!!! TACAATTAAATTGGTGATTA+TGG + chr7_1:60371192-60371211 Msa1027790:intron 20.0%
!! TCTATATAATTCTACAATTG+CGG - chr7_1:60371253-60371272 None:intergenic 20.0%
!!! GTTTTATATGTTGTTAACTT+TGG + chr7_1:60371773-60371792 Msa1027790:intron 20.0%
!! AAGATGCAAATACATTTATT+AGG - chr7_1:60372013-60372032 None:intergenic 20.0%
!! AAAAATTTGGTTGCAAATAA+CGG - chr7_1:60372186-60372205 None:intergenic 20.0%
!!! AAAAATTTTGACATTTTCTC+AGG + chr7_1:60372561-60372580 Msa1027790:CDS 20.0%
!! TTGTTACATAAAGACATATA+TGG + chr7_1:60372707-60372726 Msa1027790:intron 20.0%
!! TCTACTAAAACAAAGTAAAT+TGG + chr7_1:60373040-60373059 Msa1027790:intron 20.0%
!!! TTTTTGCACATATTTTGAAT+AGG + chr7_1:60373131-60373150 Msa1027790:intron 20.0%
!! TAACAATTAACAACATATAG+TGG - chr7_1:60373259-60373278 None:intergenic 20.0%
!! AAGTAGAATATAAAATAACC+TGG - chr7_1:60373503-60373522 None:intergenic 20.0%
!! TTGTTAACAGTGTAAATTTA+GGG - chr7_1:60373565-60373584 None:intergenic 20.0%
!! TTTGTTAACAGTGTAAATTT+AGG - chr7_1:60373566-60373585 None:intergenic 20.0%
!!! GACAATCTAAAATATTTACA+TGG + chr7_1:60373699-60373718 Msa1027790:intron 20.0%
!!! TGTGAAGAATTTTAATTTGA+AGG + chr7_1:60374235-60374254 Msa1027790:three_prime_UTR 20.0%
!! CTTGAAAGAAAAAAAAACTT+GGG + chr7_1:60374298-60374317 Msa1027790:three_prime_UTR 20.0%
!!! ATGTGATTTTTCTAATTGAA+TGG + chr7_1:60374369-60374388 Msa1027790:three_prime_UTR 20.0%
!! TCATATTTACAATATTGTGT+TGG + chr7_1:60374400-60374419 Msa1027790:three_prime_UTR 20.0%
! GAAAAAGGGTTATTGAAAAA+TGG - chr7_1:60367640-60367659 None:intergenic 25.0%
! CAATGAAAGCAAATTGAAAA+AGG - chr7_1:60367655-60367674 None:intergenic 25.0%
!! AAAAGCATAAACAATGAGAA+GGG - chr7_1:60367821-60367840 None:intergenic 25.0%
!! TAAAAGCATAAACAATGAGA+AGG - chr7_1:60367822-60367841 None:intergenic 25.0%
!! ATTTTGTGTTTCATGTATCT+GGG + chr7_1:60367854-60367873 Msa1027790:intron 25.0%
!!! TTGTGGTCTATTTTTGTAAT+TGG + chr7_1:60368006-60368025 Msa1027790:intron 25.0%
!!! TGTGGTCTATTTTTGTAATT+GGG + chr7_1:60368007-60368026 Msa1027790:intron 25.0%
! TAAACACAAAGCAATTTCAA+AGG - chr7_1:60368321-60368340 None:intergenic 25.0%
! TTGAAATTGCTTTGTGTTTA+AGG + chr7_1:60368321-60368340 Msa1027790:intron 25.0%
! TTAAGGTTTATTATTGGTGT+TGG + chr7_1:60368338-60368357 Msa1027790:intron 25.0%
! ATGGAACTACAAAAAAGTAA+AGG - chr7_1:60368396-60368415 None:intergenic 25.0%
! TTCATAAGTAAGATGTGATA+TGG + chr7_1:60368536-60368555 Msa1027790:intron 25.0%
! GTTAAACATGTACATGTTAT+TGG + chr7_1:60368577-60368596 Msa1027790:intron 25.0%
! AAAAAAAAAATGGGAATCCA+AGG - chr7_1:60368630-60368649 None:intergenic 25.0%
! CAATCCTTCAAATCAAAATA+GGG - chr7_1:60368788-60368807 None:intergenic 25.0%
! ACAATCCTTCAAATCAAAAT+AGG - chr7_1:60368789-60368808 None:intergenic 25.0%
! AACTAGTTACAAATAATGTC+AGG + chr7_1:60368824-60368843 Msa1027790:intron 25.0%
! TCATAGTTTCTTGTTAAAGA+AGG + chr7_1:60369009-60369028 Msa1027790:five_prime_UTR 25.0%
! TTAGACAGTTGATTAAAACT+CGG - chr7_1:60369154-60369173 None:intergenic 25.0%
! TGCATGAAAGATATATGTAT+AGG + chr7_1:60369539-60369558 Msa1027790:intron 25.0%
! GCATGAAAGATATATGTATA+GGG + chr7_1:60369540-60369559 Msa1027790:intron 25.0%
! TTTCAAATTGGTCATGAAAT+TGG + chr7_1:60369575-60369594 Msa1027790:intron 25.0%
! AAGAAAATACTGTAACAAAC+AGG - chr7_1:60369625-60369644 None:intergenic 25.0%
! TTTCATAAGCTTAAACAAAC+AGG + chr7_1:60370180-60370199 Msa1027790:intron 25.0%
! GATTACTGAATGTAATATGT+CGG + chr7_1:60370339-60370358 Msa1027790:intron 25.0%
! ATTACTGAATGTAATATGTC+GGG + chr7_1:60370340-60370359 Msa1027790:intron 25.0%
! AAACAATCATACTTATGTAG+TGG - chr7_1:60370645-60370664 None:intergenic 25.0%
! ATCCTAATATACCCTTAAAA+TGG + chr7_1:60370679-60370698 Msa1027790:intron 25.0%
! GTAGTGGTATTTAAAAAGTT+TGG + chr7_1:60370914-60370933 Msa1027790:intron 25.0%
! TTTCAGTGATTTCTATATTC+TGG - chr7_1:60371312-60371331 None:intergenic 25.0%
! TGTAATAATCAAAGTTGCAA+TGG + chr7_1:60371488-60371507 Msa1027790:intron 25.0%
!!! TTAAGTGGTTACTTATTTTC+AGG + chr7_1:60371634-60371653 Msa1027790:intron 25.0%
! GATGTCATAATGATATATGA+CGG + chr7_1:60371869-60371888 Msa1027790:intron 25.0%
! CATATCAACACACATTTATT+AGG - chr7_1:60371927-60371946 None:intergenic 25.0%
! CATATCAACACACATTTATT+AGG - chr7_1:60371927-60371946 None:intergenic 25.0%
! ATAAGGATTCTTATGTTTCA+GGG - chr7_1:60372063-60372082 None:intergenic 25.0%
! TATAAGGATTCTTATGTTTC+AGG - chr7_1:60372064-60372083 None:intergenic 25.0%
!! GTTATTTGCAACCAAATTTT+TGG + chr7_1:60372185-60372204 Msa1027790:intron 25.0%
! ATCAATATCATCATAACTCT+TGG - chr7_1:60372345-60372364 None:intergenic 25.0%
! AGTGAAGAAGAAAATAATGT+AGG + chr7_1:60372374-60372393 Msa1027790:intron 25.0%
! AGAAGAAAATAATGTAGGAA+AGG + chr7_1:60372379-60372398 Msa1027790:intron 25.0%
! GAAGAAAATAATGTAGGAAA+GGG + chr7_1:60372380-60372399 Msa1027790:intron 25.0%
! AAGAAAATAATGTAGGAAAG+GGG + chr7_1:60372381-60372400 Msa1027790:intron 25.0%
! TACGACAGTTATGTAAATAT+TGG + chr7_1:60372491-60372510 Msa1027790:intron 25.0%
! CAAAAGCTTACATGAAAAAT+TGG - chr7_1:60372859-60372878 None:intergenic 25.0%
! GAAACTTAGTTGTATAGTTA+TGG + chr7_1:60372916-60372935 Msa1027790:intron 25.0%
! TGTATGCAAACATATATGAT+TGG + chr7_1:60372995-60373014 Msa1027790:intron 25.0%
! GTATGCAAACATATATGATT+GGG + chr7_1:60372996-60373015 Msa1027790:intron 25.0%
! TATGCAAACATATATGATTG+GGG + chr7_1:60372997-60373016 Msa1027790:intron 25.0%
! AAAAAGTCAAAATGATTCCA+TGG - chr7_1:60373068-60373087 None:intergenic 25.0%
! TATGTGCAAAAAGCTAATAT+AGG - chr7_1:60373123-60373142 None:intergenic 25.0%
!!! TTTAAGCACATATTTTGAGT+AGG + chr7_1:60373183-60373202 Msa1027790:intron 25.0%
!!! ATATATTTTAATTGCCACCT+TGG + chr7_1:60373304-60373323 Msa1027790:intron 25.0%
! AGAATATAAAATAACCTGGA+CGG - chr7_1:60373499-60373518 None:intergenic 25.0%
! ACTTAAATCACACATATGAT+TGG - chr7_1:60373595-60373614 None:intergenic 25.0%
! ATTTAGTAGTGATGAAAGAA+TGG + chr7_1:60374108-60374127 Msa1027790:three_prime_UTR 25.0%
!!! AGTTTTTTTTTCTTTCAAGC+AGG - chr7_1:60374297-60374316 None:intergenic 25.0%
! GCTTGAAAGAAAAAAAAACT+TGG + chr7_1:60374297-60374316 Msa1027790:three_prime_UTR 25.0%
ATATATACTTTCTCTCTCCT+CGG - chr7_1:60367481-60367500 None:intergenic 30.0%
TCTGGTTGCATAAAATTCTA+GGG - chr7_1:60367549-60367568 None:intergenic 30.0%
ATCTGGTTGCATAAAATTCT+AGG - chr7_1:60367550-60367569 None:intergenic 30.0%
! GAATTTTATGCAACCAGATA+AGG + chr7_1:60367551-60367570 Msa1027790:five_prime_UTR 30.0%
! CATTTTGTGTTTCATGTATC+TGG + chr7_1:60367853-60367872 Msa1027790:intron 30.0%
! TTTTGTGTTTCATGTATCTG+GGG + chr7_1:60367855-60367874 Msa1027790:intron 30.0%
TGACATAAAGTTACAACCTT+TGG - chr7_1:60367915-60367934 None:intergenic 30.0%
!!! GTGGTCTATTTTTGTAATTG+GGG + chr7_1:60368008-60368027 Msa1027790:intron 30.0%
! ATTTTTGTAATTGGGGTATG+TGG + chr7_1:60368015-60368034 Msa1027790:intron 30.0%
! TCGACATTGGTAATAATTAG+AGG + chr7_1:60368100-60368119 Msa1027790:intron 30.0%
! ACATTGGTAATAATTAGAGG+AGG + chr7_1:60368103-60368122 Msa1027790:intron 30.0%
AACATAATTACTTGTCGTGT+CGG + chr7_1:60368140-60368159 Msa1027790:intron 30.0%
!!! ATGGAAGGTTGAGTTTTATT+TGG + chr7_1:60368292-60368311 Msa1027790:intron 30.0%
TAAAGGTTGCATATTGAACA+TGG - chr7_1:60368379-60368398 None:intergenic 30.0%
ATGTACATGTTATTGGATAG+TGG + chr7_1:60368584-60368603 Msa1027790:intron 30.0%
TATCTTGTCTTCTACATTGT+TGG + chr7_1:60368671-60368690 Msa1027790:intron 30.0%
TACATGTGAAAGAAAGTGAA+AGG - chr7_1:60368719-60368738 None:intergenic 30.0%
CAGTTAAAGTTTCTCTTTGA+TGG - chr7_1:60368755-60368774 None:intergenic 30.0%
CATATAGTAAGATGCAGAAT+TGG - chr7_1:60369080-60369099 None:intergenic 30.0%
!! AAACAACAATTGGCTTCTTT+TGG + chr7_1:60369463-60369482 Msa1027790:CDS 30.0%
! TTTTCCTATGAGTTCACAAT+AGG - chr7_1:60369683-60369702 None:intergenic 30.0%
GATTCTTACATTGTCAATAG+CGG + chr7_1:60370490-60370509 Msa1027790:intron 30.0%
!! CTCCATTTTAAGGGTATATT+AGG - chr7_1:60370684-60370703 None:intergenic 30.0%
ATAATTCTACAATTGCGGAA+AGG - chr7_1:60371248-60371267 None:intergenic 30.0%
TCTTTATCTGCACTTTCTTA+TGG + chr7_1:60371610-60371629 Msa1027790:intron 30.0%
! ACTTGGATTTATCTCTGTTT+TGG + chr7_1:60371751-60371770 Msa1027790:intron 30.0%
! AACTTTGGGAAGAAACTATA+TGG + chr7_1:60371788-60371807 Msa1027790:intron 30.0%
ACTATATGGAAAAGAGAGAA+AGG + chr7_1:60371802-60371821 Msa1027790:intron 30.0%
AGATGTCGTTATGAAATTCT+GGG - chr7_1:60372423-60372442 None:intergenic 30.0%
! GATTGATTTAAGTGTGTCAA+AGG + chr7_1:60372467-60372486 Msa1027790:intron 30.0%
TTAGTTGTATAGTTATGGCA+TGG + chr7_1:60372921-60372940 Msa1027790:intron 30.0%
! GGGGTACAAATAAATTTTGA+TGG + chr7_1:60373016-60373035 Msa1027790:intron 30.0%
CAAAATATGTGCTTAAAGCT+AGG - chr7_1:60373180-60373199 None:intergenic 30.0%
GAATATAAAATAACCTGGAC+GGG - chr7_1:60373498-60373517 None:intergenic 30.0%
AACATAAAAGTCACGATTGT+AGG + chr7_1:60373796-60373815 Msa1027790:intron 30.0%
GAAGGCAAAGAACAAAAAAA+AGG + chr7_1:60373850-60373869 Msa1027790:CDS 30.0%
CATTAAATCAATGTCAGCAT+GGG - chr7_1:60374032-60374051 None:intergenic 30.0%
ATTGGTAAGGATACATTTCA+TGG + chr7_1:60374271-60374290 Msa1027790:three_prime_UTR 30.0%
! GTTACTTTCTCTCTCTAGAA+GGG - chr7_1:60367521-60367540 None:intergenic 35.0%
!! TGCATAAAATTCTAGGGCTA+TGG - chr7_1:60367543-60367562 None:intergenic 35.0%
! AATTTGTTCACAGGTGGAAT+TGG + chr7_1:60367736-60367755 Msa1027790:five_prime_UTR 35.0%
GTTACAACCTTTGGCAAAAT+GGG - chr7_1:60367906-60367925 None:intergenic 35.0%
AGTTACAACCTTTGGCAAAA+TGG - chr7_1:60367907-60367926 None:intergenic 35.0%
! GATTGTGCTATGGTATTTTG+TGG + chr7_1:60367989-60368008 Msa1027790:intron 35.0%
TTCAAACCAATGCCATAGAA+AGG - chr7_1:60368041-60368060 None:intergenic 35.0%
!!! GTTGTTGATTTTCTGAGTGT+TGG + chr7_1:60368268-60368287 Msa1027790:intron 35.0%
!! ATTATTGGTGTTGGTAAGAG+TGG + chr7_1:60368347-60368366 Msa1027790:intron 35.0%
GTTGCATATTGAACATGGAA+AGG - chr7_1:60368374-60368393 None:intergenic 35.0%
! GTATTGGTGTAGATGCTATA+TGG - chr7_1:60368415-60368434 None:intergenic 35.0%
!!! GCTACCCTATTTTGATTTGA+AGG + chr7_1:60368781-60368800 Msa1027790:intron 35.0%
TCATTATACTCTATCTGCAG+AGG + chr7_1:60368949-60368968 Msa1027790:intron 35.0%
GGCATTTGAAAGTAAATGCA+TGG + chr7_1:60369030-60369049 Msa1027790:exon 35.0%
GAAAGTAAATGCATGGATCA+CGG + chr7_1:60369037-60369056 Msa1027790:exon 35.0%
AAAGTAAATGCATGGATCAC+GGG + chr7_1:60369038-60369057 Msa1027790:exon 35.0%
CTGGATTGAAATGGTAGATT+GGG - chr7_1:60369178-60369197 None:intergenic 35.0%
AAACAGGCTCATAGTTAAAC+TGG - chr7_1:60369609-60369628 None:intergenic 35.0%
TTGTGAACTCATAGGAAAAG+TGG + chr7_1:60369684-60369703 Msa1027790:intron 35.0%
CTCATAGGAAAAGTGGTATA+AGG + chr7_1:60369691-60369710 Msa1027790:intron 35.0%
TAACAGAAAACAACAGCTTC+TGG - chr7_1:60369760-60369779 None:intergenic 35.0%
! CAAAAACAACTGGTTCATAC+CGG + chr7_1:60370450-60370469 Msa1027790:intron 35.0%
TCAATTAAACCAGTCCAAAC+CGG - chr7_1:60370472-60370491 None:intergenic 35.0%
! AGAAACACGTGTTTTGCTAA+GGG + chr7_1:60370615-60370634 Msa1027790:intron 35.0%
! TTGCAACTGCTCCATTTTAA+GGG - chr7_1:60370693-60370712 None:intergenic 35.0%
TTAAAATGGAGCAGTTGCAA+GGG + chr7_1:60370693-60370712 Msa1027790:intron 35.0%
AGAGTGAATGAGAAAGCAAA+GGG - chr7_1:60370814-60370833 None:intergenic 35.0%
!! CAAAACTGGTTTGAAGAAGA+GGG - chr7_1:60370868-60370887 None:intergenic 35.0%
!! ACAAAACTGGTTTGAAGAAG+AGG - chr7_1:60370869-60370888 None:intergenic 35.0%
AAAATGCATCTCTCTCTCTT+TGG - chr7_1:60371139-60371158 None:intergenic 35.0%
TTATTCATGCACACACATGT+GGG - chr7_1:60371399-60371418 None:intergenic 35.0%
TTTATTCATGCACACACATG+TGG - chr7_1:60371400-60371419 None:intergenic 35.0%
GCACTTTCTTATGGTTTAAG+TGG + chr7_1:60371619-60371638 Msa1027790:intron 35.0%
CAGAAATATCGACAGAAACT+AGG - chr7_1:60372115-60372134 None:intergenic 35.0%
!! GCTCTAAGAAGCCAAAAATT+TGG - chr7_1:60372199-60372218 None:intergenic 35.0%
!!! ATTTTTGGCTTCTTAGAGCA+AGG + chr7_1:60372200-60372219 Msa1027790:intron 35.0%
!! CTCTTGGTTTTTGCTTCATT+AGG - chr7_1:60372329-60372348 None:intergenic 35.0%
CAGATGTCGTTATGAAATTC+TGG - chr7_1:60372424-60372443 None:intergenic 35.0%
! TTTTTGATGCAATATCCTGC+AGG - chr7_1:60372546-60372565 None:intergenic 35.0%
! CTTTGTGTTTTGTCATCTTC+TGG + chr7_1:60372598-60372617 Msa1027790:CDS 35.0%
TTTCAGTTAGCATGACATTG+TGG - chr7_1:60372900-60372919 None:intergenic 35.0%
AGTTATGGCATGGAAGTTAT+TGG + chr7_1:60372931-60372950 Msa1027790:intron 35.0%
!! AACAAAGTAAATTGGTGCCA+TGG + chr7_1:60373048-60373067 Msa1027790:intron 35.0%
ATACACCAATCAGATGATCA+TGG - chr7_1:60373097-60373116 None:intergenic 35.0%
ATGATCATCTGATTGGTGTA+TGG + chr7_1:60373096-60373115 Msa1027790:intron 35.0%
! TTTAATTGCCACCTTGGTTT+TGG + chr7_1:60373310-60373329 Msa1027790:intron 35.0%
AAATACTTAGTCCACCATCT+CGG - chr7_1:60373410-60373429 None:intergenic 35.0%
CAAAAAAAAGGAAAGCTCAG+AGG + chr7_1:60373862-60373881 Msa1027790:CDS 35.0%
!!! GTTGGAGTCAGATTTTGATT+TGG - chr7_1:60373956-60373975 None:intergenic 35.0%
GCATTAAATCAATGTCAGCA+TGG - chr7_1:60374033-60374052 None:intergenic 35.0%
GAGAACCCTAATGAAATCAT+GGG - chr7_1:60374202-60374221 None:intergenic 35.0%
TGAGAACCCTAATGAAATCA+TGG - chr7_1:60374203-60374222 None:intergenic 35.0%
TTTCATGTTCCTGATTGGTA+AGG + chr7_1:60374258-60374277 Msa1027790:three_prime_UTR 35.0%
GAAATGTATCCTTACCAATC+AGG - chr7_1:60374270-60374289 None:intergenic 35.0%
TCTCATTTGAACACTCTAAG+TGG - chr7_1:60374426-60374445 None:intergenic 35.0%
! CTTAGAGTGTTCAAATGAGA+TGG + chr7_1:60374426-60374445 Msa1027790:three_prime_UTR 35.0%
! GGTTACTTTCTCTCTCTAGA+AGG - chr7_1:60367522-60367541 None:intergenic 40.0%
TGCACACAAAAGTCCTTATC+TGG - chr7_1:60367567-60367586 None:intergenic 40.0%
CCTGTGAACAAATTGAAGCT+AGG - chr7_1:60367730-60367749 None:intergenic 40.0%
! CCTAGCTTCAATTTGTTCAC+AGG + chr7_1:60367727-60367746 Msa1027790:five_prime_UTR 40.0%
! AGCTTCAATTTGTTCACAGG+TGG + chr7_1:60367730-60367749 Msa1027790:five_prime_UTR 40.0%
! CTCAAAACCCATTTTGCCAA+AGG + chr7_1:60367896-60367915 Msa1027790:intron 40.0%
!! GAAGTTCTGAGATTGTGCTA+TGG + chr7_1:60367979-60367998 Msa1027790:intron 40.0%
! ACGCATTTGATCAGAAGTGT+CGG + chr7_1:60368192-60368211 Msa1027790:intron 40.0%
!!! TGATTTTCTGAGTGTTGGCA+TGG + chr7_1:60368273-60368292 Msa1027790:intron 40.0%
TATTATTGTTGTCCACGTGC+CGG + chr7_1:60368488-60368507 Msa1027790:intron 40.0%
! TAGTGGTTCCCTTATTTGTG+TGG + chr7_1:60368601-60368620 Msa1027790:intron 40.0%
! CAAGGCATCCACACAAATAA+GGG - chr7_1:60368612-60368631 None:intergenic 40.0%
! AAGCACTGTTTGACACTTGT+TGG + chr7_1:60368850-60368869 Msa1027790:intron 40.0%
TATACTCTATCTGCAGAGGT+TGG + chr7_1:60368953-60368972 Msa1027790:intron 40.0%
AAGTAAATGCATGGATCACG+GGG + chr7_1:60369039-60369058 Msa1027790:exon 40.0%
CAGAATTGGATAACGCCATA+TGG - chr7_1:60369066-60369085 None:intergenic 40.0%
GCTGGATTGAAATGGTAGAT+TGG - chr7_1:60369179-60369198 None:intergenic 40.0%
CTACCATTTCAATCCAGCAT+TGG + chr7_1:60369181-60369200 Msa1027790:CDS 40.0%
AACACTACCGCTAGAATCAT+CGG + chr7_1:60369228-60369247 Msa1027790:CDS 40.0%
GAAATTGCCGATGATTCTAG+CGG - chr7_1:60369238-60369257 None:intergenic 40.0%
TCATCGGCAATTTCATCTCA+AGG + chr7_1:60369244-60369263 Msa1027790:CDS 40.0%
! TTACTAGATGGTGTTGGACT+TGG - chr7_1:60369379-60369398 None:intergenic 40.0%
GAGTGGGAAGAAACAACAAT+TGG + chr7_1:60369453-60369472 Msa1027790:CDS 40.0%
TTACATTGTCAATAGCGGTC+TGG + chr7_1:60370495-60370514 Msa1027790:intron 40.0%
TACATTGTCAATAGCGGTCT+GGG + chr7_1:60370496-60370515 Msa1027790:intron 40.0%
! GAGAAACACGTGTTTTGCTA+AGG + chr7_1:60370614-60370633 Msa1027790:intron 40.0%
! GAAACACGTGTTTTGCTAAG+GGG + chr7_1:60370616-60370635 Msa1027790:intron 40.0%
! AAACACGTGTTTTGCTAAGG+GGG + chr7_1:60370617-60370636 Msa1027790:intron 40.0%
! CTTGCAACTGCTCCATTTTA+AGG - chr7_1:60370694-60370713 None:intergenic 40.0%
CTTAAAATGGAGCAGTTGCA+AGG + chr7_1:60370692-60370711 Msa1027790:intron 40.0%
!!! AGCAGTTGCAAGGGTATTTT+TGG + chr7_1:60370702-60370721 Msa1027790:intron 40.0%
!!! GCAGTTGCAAGGGTATTTTT+GGG + chr7_1:60370703-60370722 Msa1027790:intron 40.0%
!!! CAGTTGCAAGGGTATTTTTG+GGG + chr7_1:60370704-60370723 Msa1027790:intron 40.0%
CAGACGAGAAAGGGATATTA+GGG - chr7_1:60370748-60370767 None:intergenic 40.0%
CTAATATCCCTTTCTCGTCT+GGG + chr7_1:60370747-60370766 Msa1027790:intron 40.0%
TAATATCCCTTTCTCGTCTG+GGG + chr7_1:60370748-60370767 Msa1027790:intron 40.0%
GAGAGTGAATGAGAAAGCAA+AGG - chr7_1:60370815-60370834 None:intergenic 40.0%
ATACCACTACCGAATAAACG+AGG - chr7_1:60370904-60370923 None:intergenic 40.0%
GGTGCAGTAACTAATGATTC+AGG - chr7_1:60371291-60371310 None:intergenic 40.0%
!!! TTTTCAGGTGAGTTGATGTC+TGG + chr7_1:60371649-60371668 Msa1027790:intron 40.0%
CTTGCAATGTAGATGACATG+AGG - chr7_1:60371697-60371716 None:intergenic 40.0%
CATGTCATCTACATTGCAAG+TGG + chr7_1:60371697-60371716 Msa1027790:CDS 40.0%
TGTCGTTATGAAATTCTGGG+CGG - chr7_1:60372420-60372439 None:intergenic 40.0%
!!! GAACATTTTTTTCCTCCTGC+AGG + chr7_1:60372528-60372547 Msa1027790:intron 40.0%
ATTCGTGAGCCTTCAATTTC+AGG + chr7_1:60372640-60372659 Msa1027790:CDS 40.0%
TGTGCATAAACGTGGCATAT+AGG - chr7_1:60372733-60372752 None:intergenic 40.0%
AGTCACCATGATCATCTGAT+TGG + chr7_1:60373089-60373108 Msa1027790:intron 40.0%
TAACAAAGCCAAAACCAAGG+TGG - chr7_1:60373321-60373340 None:intergenic 40.0%
!!! ACCTTGGTTTTGGCTTTGTT+AGG + chr7_1:60373320-60373339 Msa1027790:intron 40.0%
!!! CCTTGGTTTTGGCTTTGTTA+GGG + chr7_1:60373321-60373340 Msa1027790:intron 40.0%
TTTCCGATAATGAGCATGTC+AGG + chr7_1:60373348-60373367 Msa1027790:CDS 40.0%
TGTTACGTGCCTACTGAAAA+TGG + chr7_1:60373372-60373391 Msa1027790:CDS 40.0%
GGACTAAGTATTTCCCTTCT+TGG + chr7_1:60373417-60373436 Msa1027790:CDS 40.0%
!! ATTTCCCTTCTTGGTTCTGA+TGG + chr7_1:60373426-60373445 Msa1027790:CDS 40.0%
TCACGATTGTAGGTGATGAT+TGG + chr7_1:60373806-60373825 Msa1027790:intron 40.0%
CACGATTGTAGGTGATGATT+GGG + chr7_1:60373807-60373826 Msa1027790:intron 40.0%
TGATGATTGGGAGCTTTCTT+TGG + chr7_1:60373819-60373838 Msa1027790:CDS 40.0%
GATGATTGGGAGCTTTCTTT+GGG + chr7_1:60373820-60373839 Msa1027790:CDS 40.0%
ATGATTGGGAGCTTTCTTTG+GGG + chr7_1:60373821-60373840 Msa1027790:CDS 40.0%
!! CTTTCTTTGGGGTAGATTGA+AGG + chr7_1:60373832-60373851 Msa1027790:CDS 40.0%
GCTGTTGAATCAGATCATCA+AGG + chr7_1:60373896-60373915 Msa1027790:CDS 40.0%
!! GCTGACATTGATTTAATGCG+TGG + chr7_1:60374034-60374053 Msa1027790:CDS 40.0%
! AGCTTGCTCTATTCTGATGT+TGG - chr7_1:60374140-60374159 None:intergenic 40.0%
CTCCACCCATGATTTCATTA+GGG + chr7_1:60374194-60374213 Msa1027790:three_prime_UTR 40.0%
AACCCTAATGAAATCATGGG+TGG - chr7_1:60374199-60374218 None:intergenic 40.0%
GAAGGTTTCATGTTCCTGAT+TGG + chr7_1:60374253-60374272 Msa1027790:three_prime_UTR 40.0%
!! CTTGGGCTAGATGTTTTATG+TGG + chr7_1:60374315-60374334 Msa1027790:three_prime_UTR 40.0%
TACTTTCTCTCTCCTCGGTT+GGG - chr7_1:60367476-60367495 None:intergenic 45.0%
ATACTTTCTCTCTCCTCGGT+TGG - chr7_1:60367477-60367496 None:intergenic 45.0%
ATGTGGCCTTTCTATGGCAT+TGG + chr7_1:60368032-60368051 Msa1027790:intron 45.0%
!! TTTCTGAGTGTTGGCATGGA+AGG + chr7_1:60368277-60368296 Msa1027790:intron 45.0%
! CCAAGGCATCCACACAAATA+AGG - chr7_1:60368613-60368632 None:intergenic 45.0%
! CCTTATTTGTGTGGATGCCT+TGG + chr7_1:60368610-60368629 Msa1027790:intron 45.0%
CCACCAATGCTGGATTGAAA+TGG - chr7_1:60369187-60369206 None:intergenic 45.0%
! CCATTTCAATCCAGCATTGG+TGG + chr7_1:60369184-60369203 Msa1027790:CDS 45.0%
!! TTTCAATCCAGCATTGGTGG+TGG + chr7_1:60369187-60369206 Msa1027790:CDS 45.0%
! TCTCAAGGTGTCAATGTGAG+TGG + chr7_1:60369259-60369278 Msa1027790:CDS 45.0%
GTCATACTGTTGTTCCGTCT+GGG + chr7_1:60369281-60369300 Msa1027790:CDS 45.0%
TCATACTGTTGTTCCGTCTG+GGG + chr7_1:60369282-60369301 Msa1027790:CDS 45.0%
GAGACTGTGAAAAGGAAGAG+AGG + chr7_1:60369304-60369323 Msa1027790:CDS 45.0%
CTGTGAAAAGGAAGAGAGGA+AGG + chr7_1:60369308-60369327 Msa1027790:CDS 45.0%
CCAGGATTACTAGATGGTGT+TGG - chr7_1:60369385-60369404 None:intergenic 45.0%
CCAACACCATCTAGTAATCC+TGG + chr7_1:60369382-60369401 Msa1027790:CDS 45.0%
ACGGTTCCAGGATTACTAGA+TGG - chr7_1:60369391-60369410 None:intergenic 45.0%
GGGTCCTATTGTGAACTCAT+AGG + chr7_1:60369676-60369695 Msa1027790:intron 45.0%
! ACAACTGGTTCATACCGGTT+TGG + chr7_1:60370455-60370474 Msa1027790:intron 45.0%
CCAGACGAGAAAGGGATATT+AGG - chr7_1:60370749-60370768 None:intergenic 45.0%
CCTAATATCCCTTTCTCGTC+TGG + chr7_1:60370746-60370765 Msa1027790:intron 45.0%
! CCGAATAAACGAGGCATCTT+CGG - chr7_1:60370895-60370914 None:intergenic 45.0%
CCGAAGATGCCTCGTTTATT+CGG + chr7_1:60370892-60370911 Msa1027790:intron 45.0%
ATGCCTCGTTTATTCGGTAG+TGG + chr7_1:60370898-60370917 Msa1027790:intron 45.0%
!! ACAATTGCGGAAAGGCATCA+AGG - chr7_1:60371240-60371259 None:intergenic 45.0%
CCACACACATACAGTCTGTT+TGG - chr7_1:60371372-60371391 None:intergenic 45.0%
CCAAACAGACTGTATGTGTG+TGG + chr7_1:60371369-60371388 Msa1027790:intron 45.0%
! AGTTGATGTCTGGTTCAGCT+GGG + chr7_1:60371659-60371678 Msa1027790:CDS 45.0%
TTGATGCAATATCCTGCAGG+AGG - chr7_1:60372543-60372562 None:intergenic 45.0%
! TTGACATTTTCTCAGGTGCG+AGG + chr7_1:60372568-60372587 Msa1027790:CDS 45.0%
! AGAGTGCCACCTGAAATTGA+AGG - chr7_1:60372652-60372671 None:intergenic 45.0%
AGGTGGCACTCTCAAATATG+AGG + chr7_1:60372660-60372679 Msa1027790:CDS 45.0%
ATGCCACGTTTATGCACACA+CGG + chr7_1:60372735-60372754 Msa1027790:intron 45.0%
TTTCCGTGTGTGCATAAACG+TGG - chr7_1:60372741-60372760 None:intergenic 45.0%
CCCTAACAAAGCCAAAACCA+AGG - chr7_1:60373324-60373343 None:intergenic 45.0%
CAGCCTGACATGCTCATTAT+CGG - chr7_1:60373354-60373373 None:intergenic 45.0%
CTACTGAAAATGGCTCCTCA+CGG + chr7_1:60373382-60373401 Msa1027790:CDS 45.0%
TAAAATAACCTGGACGGGAC+TGG - chr7_1:60373493-60373512 None:intergenic 45.0%
GAAATGCTATTCAGTGCAGC+TGG - chr7_1:60373932-60373951 None:intergenic 45.0%
CAAGGACTTAAGGATGAGGT+TGG - chr7_1:60373974-60373993 None:intergenic 45.0%
CAACCTCATCCTTAAGTCCT+TGG + chr7_1:60373972-60373991 Msa1027790:CDS 45.0%
TGACCAAGGACTTAAGGATG+AGG - chr7_1:60373978-60373997 None:intergenic 45.0%
CCTAATGAAATCATGGGTGG+AGG - chr7_1:60374196-60374215 None:intergenic 45.0%
CCTCCACCCATGATTTCATT+AGG + chr7_1:60374193-60374212 Msa1027790:three_prime_UTR 45.0%
!!! TTTTTATTTTGAAAATAATT+AGG + chr7_1:60369655-60369674 Msa1027790:intron 5.0%
!!! TTTTATTTTGAAAATAATTA+GGG + chr7_1:60369656-60369675 Msa1027790:intron 5.0%
TGGGGTATGTGGCCTTTCTA+TGG + chr7_1:60368026-60368045 Msa1027790:intron 50.0%
GTAACACGTGTGAAGCACAC+CGG + chr7_1:60368061-60368080 Msa1027790:intron 50.0%
CGAATGTGACACGTCGACAT+TGG + chr7_1:60368087-60368106 Msa1027790:intron 50.0%
ACACGACACTACACTGACAC+CGG - chr7_1:60368510-60368529 None:intergenic 50.0%
!! ATGCAGCAGAGAGTACTACC+TGG + chr7_1:60369097-60369116 Msa1027790:CDS 50.0%
!! CAGAGAGTACTACCTGGTTC+TGG + chr7_1:60369103-60369122 Msa1027790:CDS 50.0%
CTCGGCGAAACATGTAACTC+AGG - chr7_1:60369136-60369155 None:intergenic 50.0%
!! GGTGGTGGTGGTAGTAACAT+TGG + chr7_1:60369202-60369221 Msa1027790:CDS 50.0%
GGTCATACTGTTGTTCCGTC+TGG + chr7_1:60369280-60369299 Msa1027790:CDS 50.0%
! CTTTTCACAGTCTCCCCAGA+CGG - chr7_1:60369298-60369317 None:intergenic 50.0%
AGAGGAAGGCCGAGGAAATA+TGG + chr7_1:60369322-60369341 Msa1027790:CDS 50.0%
CTGTCAGCGCCATATTTCCT+CGG - chr7_1:60369334-60369353 None:intergenic 50.0%
CGCTGACAGAGTTGTGTCAT+TGG + chr7_1:60369345-60369364 Msa1027790:CDS 50.0%
! TTGTTTCTTCCCACTCCCAG+GGG - chr7_1:60369449-60369468 None:intergenic 50.0%
!! GTTGTTTCTTCCCACTCCCA+GGG - chr7_1:60369450-60369469 None:intergenic 50.0%
!! TGTTGTTTCTTCCCACTCCC+AGG - chr7_1:60369451-60369470 None:intergenic 50.0%
!! TGGTTCATACCGGTTTGGAC+TGG + chr7_1:60370460-60370479 Msa1027790:intron 50.0%
ATTGTCAATAGCGGTCTGGG+CGG + chr7_1:60370499-60370518 Msa1027790:intron 50.0%
GGTGGTGTAGAATAGAGGTG+TGG + chr7_1:60370577-60370596 Msa1027790:intron 50.0%
AGAGTGACGAGAAGAGAGAG+CGG - chr7_1:60370791-60370810 None:intergenic 50.0%
!! ACTGGTTTGAAGAAGAGGGC+CGG - chr7_1:60370864-60370883 None:intergenic 50.0%
! GCATCTTCGGTGCACAAAAC+TGG - chr7_1:60370882-60370901 None:intergenic 50.0%
ACAGACTGTATGTGTGTGGC+AGG + chr7_1:60371373-60371392 Msa1027790:intron 50.0%
!! GAGTTGATGTCTGGTTCAGC+TGG + chr7_1:60371658-60371677 Msa1027790:CDS 50.0%
CGTGAGCCTTCAATTTCAGG+TGG + chr7_1:60372643-60372662 Msa1027790:CDS 50.0%
!! CGTGAGGAGCCATTTTCAGT+AGG - chr7_1:60373384-60373403 None:intergenic 50.0%
GAAAGCTCAGAGGATGCAGA+AGG + chr7_1:60373872-60373891 Msa1027790:CDS 50.0%
TGCTGCTGACCAAGGACTTA+AGG - chr7_1:60373984-60374003 None:intergenic 50.0%
AGCATCGCGTCAGATGGATA+TGG + chr7_1:60374000-60374019 Msa1027790:CDS 50.0%
GCATCGCGTCAGATGGATAT+GGG + chr7_1:60374001-60374020 Msa1027790:CDS 50.0%
! CCTCGGTTGGGTTGCGATAT+CGG - chr7_1:60367464-60367483 None:intergenic 55.0%
CGACGTGTCACATTCGTGTC+CGG - chr7_1:60368083-60368102 None:intergenic 55.0%
CATGGATCACGGGGACCATA+TGG + chr7_1:60369048-60369067 Msa1027790:exon 55.0%
! TCAGGTTGTGCTCCAGAACC+AGG - chr7_1:60369118-60369137 None:intergenic 55.0%
!! CAATCCAGCATTGGTGGTGG+TGG + chr7_1:60369190-60369209 Msa1027790:CDS 55.0%
ACTACCACCACCACCAATGC+TGG - chr7_1:60369197-60369216 None:intergenic 55.0%
CGTCTGGGGAGACTGTGAAA+AGG + chr7_1:60369296-60369315 Msa1027790:CDS 55.0%
AAAGGAAGAGAGGAAGGCCG+AGG + chr7_1:60369314-60369333 Msa1027790:CDS 55.0%
AATCCTGGAACCGTGACGCA+AGG + chr7_1:60369397-60369416 Msa1027790:CDS 55.0%
TGTTTCTTCCCACTCCCAGG+GGG - chr7_1:60369448-60369467 None:intergenic 55.0%
TCTGGGCGGTGTGATAGAGT+TGG + chr7_1:60370513-60370532 Msa1027790:intron 55.0%
CTGGGCGGTGTGATAGAGTT+GGG + chr7_1:60370514-60370533 Msa1027790:intron 55.0%
TGGGCGGTGTGATAGAGTTG+GGG + chr7_1:60370515-60370534 Msa1027790:intron 55.0%
TGTGATAGAGTTGGGGCGGT+TGG + chr7_1:60370522-60370541 Msa1027790:intron 55.0%
GTGATAGAGTTGGGGCGGTT+GGG + chr7_1:60370523-60370542 Msa1027790:intron 55.0%
GGCGAGGTGGTGTAGAATAG+AGG + chr7_1:60370572-60370591 Msa1027790:intron 55.0%
GTGTTTCTCGTGCACGAACG+TGG - chr7_1:60370603-60370622 None:intergenic 55.0%
GAGCGGGCGTATATGTTCTG+TGG - chr7_1:60370774-60370793 None:intergenic 55.0%
GAGTGACGAGAAGAGAGAGC+GGG - chr7_1:60370790-60370809 None:intergenic 55.0%
TGGTTTGAAGAAGAGGGCCG+GGG - chr7_1:60370862-60370881 None:intergenic 55.0%
! CTGGTTTGAAGAAGAGGGCC+GGG - chr7_1:60370863-60370882 None:intergenic 55.0%
! GATGTCTGGTTCAGCTGGGA+CGG + chr7_1:60371663-60371682 Msa1027790:CDS 55.0%
! ATGTCTGGTTCAGCTGGGAC+GGG + chr7_1:60371664-60371683 Msa1027790:CDS 55.0%
GCGGCCATCAGAACCAAGAA+GGG - chr7_1:60373433-60373452 None:intergenic 55.0%
CAACTGCTCCACCAAAGACG+CGG - chr7_1:60373452-60373471 None:intergenic 55.0%
GTCTTTGGTGGAGCAGTTGG+TGG + chr7_1:60373453-60373472 Msa1027790:CDS 55.0%
CCGATATCGCAACCCAACCG+AGG + chr7_1:60367461-60367480 Msa1027790:five_prime_UTR 60.0%
ACTACACTGACACCGGCACG+TGG - chr7_1:60368503-60368522 None:intergenic 60.0%
TTTCGGACCGCCTTGCGTCA+CGG - chr7_1:60369410-60369429 None:intergenic 60.0%
GCGGTGTGATAGAGTTGGGG+CGG + chr7_1:60370518-60370537 Msa1027790:intron 60.0%
GTTGGGGCGGTTGGGATCAA+TGG + chr7_1:60370531-60370550 Msa1027790:intron 60.0%
TACACCACCTCGCCACGTGT+GGG - chr7_1:60370566-60370585 None:intergenic 60.0%
CTGTGGCCCCAGACGAGAAA+GGG - chr7_1:60370757-60370776 None:intergenic 60.0%
TCTGTGGCCCCAGACGAGAA+AGG - chr7_1:60370758-60370777 None:intergenic 60.0%
TCCTCACGGAACCGAGATGG+TGG + chr7_1:60373396-60373415 Msa1027790:CDS 60.0%
TCCACCATCTCGGTTCCGTG+AGG - chr7_1:60373400-60373419 None:intergenic 60.0%
CGCGGCCATCAGAACCAAGA+AGG - chr7_1:60373434-60373453 None:intergenic 60.0%
! GGTTCTGATGGCCGCGTCTT+TGG + chr7_1:60373438-60373457 Msa1027790:CDS 60.0%
TCTGATGGCCGCGTCTTTGG+TGG + chr7_1:60373441-60373460 Msa1027790:CDS 60.0%
CGCGTCTTTGGTGGAGCAGT+TGG + chr7_1:60373450-60373469 Msa1027790:CDS 60.0%
! ACGGGACTGGCAGCAACAAG+CGG - chr7_1:60373480-60373499 None:intergenic 60.0%
TGACGCGATGCTGCTGACCA+AGG - chr7_1:60373992-60374011 None:intergenic 60.0%
GTCAGCAGCATCGCGTCAGA+TGG + chr7_1:60373994-60374013 Msa1027790:CDS 60.0%
CCTGGAACCGTGACGCAAGG+CGG + chr7_1:60369400-60369419 Msa1027790:CDS 65.0%
ACGCAAGGCGGTCCGAAACG+AGG + chr7_1:60369412-60369431 Msa1027790:CDS 65.0%
CGCAAGGCGGTCCGAAACGA+GGG + chr7_1:60369413-60369432 Msa1027790:CDS 65.0%
GCGGTCCGAAACGAGGGAGA+GGG + chr7_1:60369419-60369438 Msa1027790:CDS 65.0%
GGACGCCCTCTCCCTCGTTT+CGG - chr7_1:60369427-60369446 None:intergenic 65.0%
!! TGGCTAGCCTCACCCACACG+TGG + chr7_1:60370551-60370570 Msa1027790:intron 65.0%
CTACACCACCTCGCCACGTG+TGG - chr7_1:60370567-60370586 None:intergenic 65.0%
!! ACGGCTGGTTCGCAGCAGAG+GGG - chr7_1:60370837-60370856 None:intergenic 65.0%
!! CACGGCTGGTTCGCAGCAGA+GGG - chr7_1:60370838-60370857 None:intergenic 65.0%
GGCTCCTCACGGAACCGAGA+TGG + chr7_1:60373393-60373412 Msa1027790:CDS 65.0%
TGTTGCTGCCAGTCCCGTCC+AGG + chr7_1:60373482-60373501 Msa1027790:CDS 65.0%
CCGCCTTGCGTCACGGTTCC+AGG - chr7_1:60369403-60369422 None:intergenic 70.0%
GGCGGTCCGAAACGAGGGAG+AGG + chr7_1:60369418-60369437 Msa1027790:CDS 70.0%
AGCCTCACCCACACGTGGCG+AGG + chr7_1:60370556-60370575 Msa1027790:intron 70.0%
CACCTCGCCACGTGTGGGTG+AGG - chr7_1:60370561-60370580 None:intergenic 70.0%
CTCACCCACACGTGGCGAGG+TGG + chr7_1:60370559-60370578 Msa1027790:intron 70.0%
!! CCACGGCTGGTTCGCAGCAG+AGG - chr7_1:60370839-60370858 None:intergenic 70.0%
CCTCTGCTGCGAACCAGCCG+TGG + chr7_1:60370836-60370855 Msa1027790:intron 70.0%
GAAGAAGAGGGCCGGGGCCA+CGG - chr7_1:60370856-60370875 None:intergenic 70.0%
!! GAGGGAGAGGGCGTCCCCCT+GGG + chr7_1:60369431-60369450 Msa1027790:CDS 75.0%
!! AGAGGGCGTCCCCCTGGGAG+TGG + chr7_1:60369436-60369455 Msa1027790:CDS 75.0%
!! GAGGGCGTCCCCCTGGGAGT+GGG + chr7_1:60369437-60369456 Msa1027790:CDS 75.0%
CTGCGAACCAGCCGTGGCCC+CGG + chr7_1:60370842-60370861 Msa1027790:intron 75.0%
!!! CGAGGGAGAGGGCGTCCCCC+TGG + chr7_1:60369430-60369449 Msa1027790:CDS 80.0%
! AAGAGGGCCGGGGCCACGGC+TGG - chr7_1:60370852-60370871 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 60367429 60374489 60367429 ID=Msa1027790;Name=Msa1027790
chr7_1 mRNA 60367429 60374489 60367429 ID=Msa1027790-mRNA-1;Parent=Msa1027790;Name=Msa1027790-mRNA-1;_AED=0.04;_eAED=0.04;_QI=451|1|1|1|1|1|6|429|346
chr7_1 exon 60367429 60367799 60367429 ID=Msa1027790-mRNA-1:exon:12439;Parent=Msa1027790-mRNA-1
chr7_1 exon 60368969 60369484 60368969 ID=Msa1027790-mRNA-1:exon:12440;Parent=Msa1027790-mRNA-1
chr7_1 exon 60371656 60371723 60371656 ID=Msa1027790-mRNA-1:exon:12441;Parent=Msa1027790-mRNA-1
chr7_1 exon 60372550 60372681 60372550 ID=Msa1027790-mRNA-1:exon:12442;Parent=Msa1027790-mRNA-1
chr7_1 exon 60373342 60373503 60373342 ID=Msa1027790-mRNA-1:exon:12443;Parent=Msa1027790-mRNA-1
chr7_1 exon 60373818 60374489 60373818 ID=Msa1027790-mRNA-1:exon:12444;Parent=Msa1027790-mRNA-1
chr7_1 five_prime_UTR 60367429 60367799 60367429 ID=Msa1027790-mRNA-1:five_prime_utr;Parent=Msa1027790-mRNA-1
chr7_1 five_prime_UTR 60368969 60369048 60368969 ID=Msa1027790-mRNA-1:five_prime_utr;Parent=Msa1027790-mRNA-1
chr7_1 CDS 60369049 60369484 60369049 ID=Msa1027790-mRNA-1:cds;Parent=Msa1027790-mRNA-1
chr7_1 CDS 60371656 60371723 60371656 ID=Msa1027790-mRNA-1:cds;Parent=Msa1027790-mRNA-1
chr7_1 CDS 60372550 60372681 60372550 ID=Msa1027790-mRNA-1:cds;Parent=Msa1027790-mRNA-1
chr7_1 CDS 60373342 60373503 60373342 ID=Msa1027790-mRNA-1:cds;Parent=Msa1027790-mRNA-1
chr7_1 CDS 60373818 60374060 60373818 ID=Msa1027790-mRNA-1:cds;Parent=Msa1027790-mRNA-1
chr7_1 three_prime_UTR 60374061 60374489 60374061 ID=Msa1027790-mRNA-1:three_prime_utr;Parent=Msa1027790-mRNA-1
Gene Sequence

>Msa1027790

ATGGATCACGGGGACCATATGGCGTTATCCAATTCTGCATCTTACTATATGCAGCAGAGAGTACTACCTGGTTCTGGAGCACAACCTGAGTTACATGTTTCGCCGAGTTTTAATCAACTGTCTAATCCCAATCTACCATTTCAATCCAGCATTGGTGGTGGTGGTAGTAACATTGGAACAACACTACCGCTAGAATCATCGGCAATTTCATCTCAAGGTGTCAATGTGAGTGGTCATACTGTTGTTCCGTCTGGGGAGACTGTGAAAAGGAAGAGAGGAAGGCCGAGGAAATATGGCGCTGACAGAGTTGTGTCATTGGCACTGAGTCCAAGTCCAACACCATCTAGTAATCCTGGAACCGTGACGCAAGGCGGTCCGAAACGAGGGAGAGGGCGTCCCCCTGGGAGTGGGAAGAAACAACAATTGGCTTCTTTTGGTGAGTTGATGTCTGGTTCAGCTGGGACGGGATTCATTCCTCATGTCATCTACATTGCAAGTGGAGAAGATATTGCATCAAAAATTTTGACATTTTCTCAGGTGCGAGGTAGAGCTCTTTGTGTTTTGTCATCTTCTGGCAGTGTCTCAAGCGTCATTATTCGTGAGCCTTCAATTTCAGGTGGCACTCTCAAATATGAGGGACATTTTCCGATAATGAGCATGTCAGGCTGTTACGTGCCTACTGAAAATGGCTCCTCACGGAACCGAGATGGTGGACTAAGTATTTCCCTTCTTGGTTCTGATGGCCGCGTCTTTGGTGGAGCAGTTGGTGGACCGCTTGTTGCTGCCAGTCCCGTCCAGGTGATGATTGGGAGCTTTCTTTGGGGTAGATTGAAGGCAAAGAACAAAAAAAAGGAAAGCTCAGAGGATGCAGAAGGTGCTGTTGAATCAGATCATCAAGGAGCTCATAATCCAGCTGCACTGAATAGCATTTCACCAAATCAAAATCTGACTCCAACCTCATCCTTAAGTCCTTGGTCAGCAGCATCGCGTCAGATGGATATGGGTAACTCCCATGCTGACATTGATTTAATGCGTGGTTGA
Protein sequence

>Msa1027790

MDHGDHMALSNSASYYMQQRVLPGSGAQPELHVSPSFNQLSNPNLPFQSSIGGGGSNIGTTLPLESSAISSQGVNVSGHTVVPSGETVKRKRGRPRKYGADRVVSLALSPSPTPSSNPGTVTQGGPKRGRGRPPGSGKKQQLASFGELMSGSAGTGFIPHVIYIASGEDIASKILTFSQVRGRALCVLSSSGSVSSVIIREPSISGGTLKYEGHFPIMSMSGCYVPTENGSSRNRDGGLSISLLGSDGRVFGGAVGGPLVAASPVQVMIGSFLWGRLKAKNKKKESSEDAEGAVESDHQGAHNPAALNSISPNQNLTPTSSLSPWSAASRQMDMGNSHADIDLMRG*