AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1271600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271600 MtrunA17_Chr8g0335841 97.582 579 13 1 1 579 1 578 0.0 1164
Msa1271600 MtrunA17_Chr2g0298001 35.387 568 302 10 47 578 55 593 1.05e-109 341
Msa1271600 MtrunA17_Chr4g0072181 38.736 364 191 5 207 562 36 375 8.31e-84 266
Msa1271600 MtrunA17_Chr4g0072141 39.823 339 166 7 251 578 1 312 6.77e-74 238
Msa1271600 MtrunA17_Chr4g0072161 34.908 381 205 5 155 501 34 405 4.27e-71 234
Msa1271600 MtrunA17_Chr4g0067881 23.295 352 224 10 23 354 14 339 3.67e-18 88.2
Msa1271600 MtrunA17_Chr8g0391331 25.448 279 183 7 96 354 68 341 1.10e-17 86.7
Msa1271600 MtrunA17_Chr4g0025921 28.470 281 175 10 96 354 53 329 1.03e-16 83.6
Msa1271600 MtrunA17_Chr1g0150111 22.200 500 295 18 112 573 90 533 6.45e-16 80.9
Msa1271600 MtrunA17_Chr1g0211491 23.962 313 197 9 61 354 6 296 1.71e-15 79.7
Msa1271600 MtrunA17_Chr4g0025931 25.623 281 184 7 96 354 38 315 1.08e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271600 AT3G13490.1 79.350 523 105 2 60 579 80 602 0.0 875
Msa1271600 AT3G11710.1 37.565 575 276 11 52 579 73 611 3.39e-111 345
Msa1271600 AT4G26870.1 23.265 490 291 17 116 573 88 524 1.67e-20 95.5
Msa1271600 AT4G33760.1 26.415 265 171 6 109 354 84 343 6.11e-17 84.7
Msa1271600 AT4G33760.2 27.957 186 126 3 176 354 23 207 1.21e-11 67.8

Find 152 sgRNAs with CRISPR-Local

Find 559 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGATATATATAGATATTT+AGG 0.193147 8_3:-5040489 Msa1271600:CDS
CGGGATCGATTTCAATGAAT+TGG 0.236564 8_3:-5034698 Msa1271600:CDS
GTTGTCTAATTTGATCTTCT+AGG 0.240241 8_3:+5033466 None:intergenic
TTCCTAACGGCTTTGGAGTA+TGG 0.242936 8_3:-5033348 Msa1271600:CDS
ACAATTAAACGCACAGAAAA+AGG 0.251919 8_3:-5040087 Msa1271600:intron
TATGGAATGCCTCCAGCTTC+TGG 0.268256 8_3:-5033330 Msa1271600:CDS
AAAGCTTACTGTTGATTATC+AGG 0.299156 8_3:-5034889 Msa1271600:intron
AATCCACAAACCTGCAAAAC+TGG 0.301957 8_3:+5037050 None:intergenic
TCATCAAAGGGTTCCATGTT+AGG 0.314745 8_3:+5041958 None:intergenic
CGGAGGACAATGGATTCTTT+AGG 0.322824 8_3:-5037092 Msa1271600:CDS
CGATGATTTCCTAACGGCTT+TGG 0.326372 8_3:-5033355 Msa1271600:CDS
AACAAAACTGTCCTTATTGT+TGG 0.332509 8_3:+5033133 None:intergenic
ATCTCACCAGCATTCTCTTT+AGG 0.332997 8_3:+5036136 None:intergenic
GCCAATGGAGATATCTCAAT+TGG 0.333726 8_3:+5034300 None:intergenic
TTGACACTAAGAGACGATTC+AGG 0.336175 8_3:-5040378 Msa1271600:CDS
ATTGTTGCTAGGAGAGCATT+TGG 0.336932 8_3:-5040414 Msa1271600:CDS
AATCTTGTTAAAGAAATTTC+CGG 0.340550 8_3:-5034718 Msa1271600:CDS
GTGCATGGTCTCCCTCCTCC+AGG 0.349566 8_3:+5034741 None:intergenic
TACATTCTTTCCAGGGGCTT+GGG 0.354075 8_3:-5033230 Msa1271600:intron
ACCTCTATAGTTGTAAATTC+CGG 0.362930 8_3:+5035578 None:intergenic
AGACGATTCAGGGACAATTC+AGG 0.369249 8_3:-5040367 Msa1271600:intron
TCCAGGGGCTTGGGATTGAC+AGG 0.376818 8_3:-5033221 Msa1271600:intron
TTACATTCTTTCCAGGGGCT+TGG 0.380952 8_3:-5033231 Msa1271600:intron
ATCTTGTTAAAGAAATTTCC+GGG 0.390588 8_3:-5034717 Msa1271600:CDS
TGGAAGCTTACCTGATCTAT+AGG 0.390653 8_3:+5033857 None:intergenic
TTCATTGATTAGGGAGAAGC+TGG 0.396179 8_3:-5036240 Msa1271600:intron
TTGAAGGCATATGTTGATAT+TGG 0.396591 8_3:-5040132 Msa1271600:CDS
CTGCTAAATTCATCATGCTT+TGG 0.405344 8_3:+5034949 None:intergenic
GTACTCAAGGTCCAACAATA+AGG 0.410867 8_3:-5033144 Msa1271600:exon
AATGATCATGTATCTATTGC+GGG 0.414985 8_3:-5040441 Msa1271600:CDS
TCATGATGCTCTTTCAACTA+AGG 0.415332 8_3:+5032958 None:intergenic
AATGTAGGTTGGATGAGCTT+TGG 0.416343 8_3:+5034336 None:intergenic
GGCTATTACATCTCTAATGC+TGG 0.425350 8_3:+5033173 None:intergenic
GGGATCGATTTCAATGAATT+GGG 0.428050 8_3:-5034697 Msa1271600:CDS
ATATATAGATATTTAGGAAA+TGG 0.430912 8_3:-5040483 Msa1271600:CDS
ACAGGGAGTTGAGATATGTT+TGG 0.433439 8_3:-5034770 Msa1271600:intron
TATTGTTGGACCTTGAGTAC+TGG 0.435483 8_3:+5033147 None:intergenic
ATTCAAAGGTTATCTTGTCT+TGG 0.440813 8_3:-5032935 Msa1271600:three_prime_UTR
TTTCTTTATGGCAGGTGGGT+GGG 0.442944 8_3:-5035664 Msa1271600:intron
GGGGCTTGGGATTGACAGGT+TGG 0.444034 8_3:-5033217 Msa1271600:CDS
ATCGTCTCTTAGTGTCAAAA+AGG 0.444746 8_3:+5040383 None:intergenic
AAAGCAGCTCTTTCAACAAA+TGG 0.446908 8_3:-5033432 Msa1271600:CDS
GGCAGATTGGCATGCTTCAA+TGG 0.449344 8_3:+5034600 None:intergenic
CAGTGTGCTCTTGCAGTTCA+CGG 0.450059 8_3:-5034912 Msa1271600:CDS
TTCATTTGTGGTCGGGAACT+AGG 0.452404 8_3:-5033905 Msa1271600:CDS
GGTCGAATATTTAGAAATGA+AGG 0.453886 8_3:-5035620 Msa1271600:CDS
CTCCCTATCGGAGGTGGAAG+TGG 0.454419 8_3:+5041821 None:intergenic
GTGACATACCACAATTCTCT+TGG 0.455727 8_3:-5036195 Msa1271600:CDS
AATATCAACTCGTCATAATC+CGG 0.456214 8_3:-5035597 Msa1271600:CDS
ACGGCGGTTGCGACCGGAGG+AGG 0.461545 8_3:+5041863 None:intergenic
TGATCAGTTTGAGCAGTTGA+AGG 0.461596 8_3:-5040148 Msa1271600:CDS
CGGAACACATCAGCTACCTC+TGG 0.463336 8_3:+5038020 None:intergenic
TCTTATTCAACCACCTCCTC+CGG 0.464171 8_3:-5041876 Msa1271600:CDS
GAAATAGTAAATAATGATGA+TGG 0.470287 8_3:+5033072 None:intergenic
GAATGAAATTGTTCATCAAA+GGG 0.470592 8_3:+5041946 None:intergenic
AGACTAAATAAAAGTATTGG+TGG 0.471614 8_3:-5042078 None:intergenic
GTTAGACCGTGATATTTGTC+AGG 0.473334 8_3:+5038508 None:intergenic
CCGTGATATTTGTCAGGAAG+TGG 0.479675 8_3:+5038514 None:intergenic
CTGATACTCGATAGATAGAA+AGG 0.480701 8_3:-5042013 Msa1271600:five_prime_UTR
TAAGTAGGTGGCCGGCAGAT+TGG 0.482101 8_3:+5034587 None:intergenic
AGATATGTTTGGAAAGGCCC+TGG 0.482975 8_3:-5034759 Msa1271600:CDS
AGTCTAAAACAAATGTAGGT+TGG 0.484037 8_3:+5034325 None:intergenic
ATTGTTGGACCTTGAGTACT+GGG 0.484670 8_3:+5033148 None:intergenic
CAATTCATTGAAATCGATCC+CGG 0.486294 8_3:+5034699 None:intergenic
CAAGCTACTCTGAGTACCCT+TGG 0.488990 8_3:-5034652 Msa1271600:CDS
TGATCCTCCATTAGATCCAC+AGG 0.489528 8_3:-5033950 Msa1271600:intron
TGAATGAAATTGTTCATCAA+AGG 0.490381 8_3:+5041945 None:intergenic
TGCATGGTCTCCCTCCTCCA+GGG 0.495010 8_3:+5034742 None:intergenic
AGAATTACGGCGGTTGCGAC+CGG 0.496601 8_3:+5041857 None:intergenic
TCGAGCCATGCGCTTGAAGA+AGG 0.504415 8_3:-5041793 Msa1271600:intron
GTTTGGAAAGGCCCTGGAGG+AGG 0.505574 8_3:-5034753 Msa1271600:CDS
ATCGGAGGTGGAAGTGGTGG+AGG 0.505995 8_3:+5041827 None:intergenic
TTCTTTAACAAGATTGTGCA+TGG 0.506016 8_3:+5034726 None:intergenic
TTGTTCCACTCATAAGCATA+GGG 0.506743 8_3:+5040534 None:intergenic
TGTTATCAAGATTCTTTCCA+AGG 0.509846 8_3:+5034635 None:intergenic
TTATGTACCATTCCAGAAGC+TGG 0.510329 8_3:+5033318 None:intergenic
ATTGACTGATCCTATAGATC+AGG 0.512443 8_3:-5033867 Msa1271600:intron
TGGAGGACGACGGAGAATTA+CGG 0.514870 8_3:+5041844 None:intergenic
TGACACTAAGAGACGATTCA+GGG 0.517242 8_3:-5040377 Msa1271600:CDS
TCCGGAATTTACAACTATAG+AGG 0.517384 8_3:-5035579 Msa1271600:intron
GTTTCAGCTCTATTGCGAAA+AGG 0.520137 8_3:-5040181 Msa1271600:intron
GGGTAGTCTAAAACAAATGT+AGG 0.521669 8_3:+5034321 None:intergenic
AATAGACTCCCTATCGGAGG+TGG 0.524551 8_3:+5041815 None:intergenic
TTTGTTCCACTCATAAGCAT+AGG 0.524967 8_3:+5040533 None:intergenic
TGTCACGAATGGTCTAGCTT+CGG 0.528109 8_3:+5036212 None:intergenic
CACCACTTCCACCTCCGATA+GGG 0.536439 8_3:-5041823 Msa1271600:CDS
CTGCGGTGTGGTTTAGCCAA+TGG 0.537930 8_3:+5034285 None:intergenic
AAAGAGCATCATGAATTCAA+AGG 0.537938 8_3:-5032949 Msa1271600:three_prime_UTR
CCACCACTTCCACCTCCGAT+AGG 0.542347 8_3:-5041824 Msa1271600:CDS
AAAAGAAGGAATAGAAAATG+AGG 0.543923 8_3:-5033403 Msa1271600:CDS
GCGGTTGCGACCGGAGGAGG+TGG 0.544216 8_3:+5041866 None:intergenic
TTCCATACTCCAAAGCCGTT+AGG 0.545247 8_3:+5033346 None:intergenic
CCCAATTGAGATATCTCCAT+TGG 0.547983 8_3:-5034301 Msa1271600:CDS
TTTGGAAAGGCCCTGGAGGA+GGG 0.552293 8_3:-5034752 Msa1271600:CDS
CCAATGGAGATATCTCAATT+GGG 0.556267 8_3:+5034301 None:intergenic
GTTATCAAGATTCTTTCCAA+GGG 0.558076 8_3:+5034636 None:intergenic
TATAGGTTGTATCAGAGATA+CGG 0.559036 8_3:-5037112 Msa1271600:intron
AACCTCGTTAAGTAGGTGGC+CGG 0.559200 8_3:+5034579 None:intergenic
AATGAAAAGTTCAAACCTCT+CGG 0.565499 8_3:+5033922 None:intergenic
ATTGAAGCATGCCAATCTGC+CGG 0.566605 8_3:-5034598 Msa1271600:CDS
TTGCGGGAAGAATTGTTGCT+AGG 0.568965 8_3:-5040425 Msa1271600:CDS
GCCAATCAACCTCGTTAAGT+AGG 0.570615 8_3:+5034572 None:intergenic
GAATGATCATGTATCTATTG+CGG 0.573107 8_3:-5040442 Msa1271600:CDS
GCTATTACATCTCTAATGCT+GGG 0.573314 8_3:+5033174 None:intergenic
TGAAACTGTTGAACCTAACA+TGG 0.574370 8_3:-5041971 Msa1271600:CDS
CCTATCGGAGGTGGAAGTGG+TGG 0.578335 8_3:+5041824 None:intergenic
GATCCACAGGTTTGACCGAG+AGG 0.578678 8_3:-5033937 Msa1271600:CDS
GTTGAAGAACTTAGAAGCAA+GGG 0.578950 8_3:-5040564 Msa1271600:CDS
GTGGAAGTGGTGGAGGACGA+CGG 0.581495 8_3:+5041834 None:intergenic
AAGTACCTTCTTCAAGCGCA+TGG 0.583817 8_3:+5041788 None:intergenic
GGTGGTTGAATAAGAAGAAG+AGG 0.585694 8_3:+5041884 None:intergenic
GGTTGAAGAACTTAGAAGCA+AGG 0.589657 8_3:-5040565 Msa1271600:CDS
AATAGCCTTCCCAGTACTCA+AGG 0.592780 8_3:-5033157 Msa1271600:CDS
TTGGACCTTGAGTACTGGGA+AGG 0.593720 8_3:+5033152 None:intergenic
TGGAAAGAATCTTGATAACA+AGG 0.594763 8_3:-5034632 Msa1271600:CDS
TCTTGACGATGATTTCCTAA+CGG 0.595091 8_3:-5033361 Msa1271600:CDS
ATTACGGCGGTTGCGACCGG+AGG 0.596381 8_3:+5041860 None:intergenic
AAACCTCTCGGTCAAACCTG+TGG 0.598156 8_3:+5033934 None:intergenic
GTTGATATTGGTGATATACT+AGG 0.599745 8_3:-5040120 Msa1271600:CDS
GAGTTGAGATATGTTTGGAA+AGG 0.602646 8_3:-5034765 Msa1271600:CDS
AATGCCTCCAGCTTCTGGAA+TGG 0.606421 8_3:-5033325 Msa1271600:intron
GGATTCTTTAGGTTTCGTTG+AGG 0.620350 8_3:-5037081 Msa1271600:CDS
GGTGATATACTAGGTGCAAG+AGG 0.623168 8_3:-5040111 Msa1271600:CDS
ATTGCACCTAAAGAGAATGC+TGG 0.624253 8_3:-5036142 Msa1271600:intron
GGCTCGAATAGACTCCCTAT+CGG 0.627417 8_3:+5041809 None:intergenic
GCAGCTCTTTCAACAAATGG+TGG 0.630345 8_3:-5033429 Msa1271600:CDS
GAATTGTGGTATGTCACGAA+TGG 0.630545 8_3:+5036201 None:intergenic
AATCAACCTCGTTAAGTAGG+TGG 0.632135 8_3:+5034575 None:intergenic
ATTGATTAGGGAGAAGCTGG+AGG 0.632319 8_3:-5036237 Msa1271600:intron
AGTCTCTTCCAAGAGAATTG+TGG 0.632957 8_3:+5036187 None:intergenic
CCACTTCCTGACAAATATCA+CGG 0.639790 8_3:-5038514 Msa1271600:CDS
TGAATTATTTGTATACCACA+TGG 0.641904 8_3:-5033007 Msa1271600:three_prime_UTR
ATCAGAGATACGGAGGACAA+TGG 0.644056 8_3:-5037102 Msa1271600:CDS
CATTGGCTAAACCACACCGC+AGG 0.647461 8_3:-5034284 Msa1271600:intron
TGAATTGGGAAATGATCTCG+AGG 0.648978 8_3:-5034683 Msa1271600:CDS
AAGCATGATGAATTTAGCAG+AGG 0.654036 8_3:-5034946 Msa1271600:CDS
TAGATATACGCTATCGCCAG+AGG 0.655561 8_3:-5038480 Msa1271600:intron
GCGCGGATAAGAAGCGTGCG+AGG 0.659601 8_3:+5041906 None:intergenic
TTGAAGAACTTAGAAGCAAG+GGG 0.664475 8_3:-5040563 Msa1271600:CDS
TGTGTTCCGCAAAAGAGCCA+AGG 0.669538 8_3:-5038006 Msa1271600:intron
TCGAATAGACTCCCTATCGG+AGG 0.677501 8_3:+5041812 None:intergenic
TCGATCCCTATGCTTATGAG+TGG 0.681810 8_3:-5040539 Msa1271600:CDS
TTGAATAAGAAGAAGAGGCG+CGG 0.683601 8_3:+5041889 None:intergenic
TGTACCATTCCAGAAGCTGG+AGG 0.684157 8_3:+5033321 None:intergenic
TGCCGGCCACCTACTTAACG+AGG 0.691412 8_3:-5034581 Msa1271600:intron
TATGTTTGGAAAGGCCCTGG+AGG 0.696991 8_3:-5034756 Msa1271600:CDS
AGATATGATTGCAAATCCAG+AGG 0.699255 8_3:-5038036 Msa1271600:CDS
AGGTTGTATCAGAGATACGG+AGG 0.705032 8_3:-5037109 Msa1271600:CDS
ATGCTTAATCAAATTCCATG+TGG 0.716954 8_3:+5032992 None:intergenic
AATATTATAACATAACCTAG+AGG 0.718813 8_3:+5032893 None:intergenic
AAATGTGTATACCTGCGGTG+TGG 0.776533 8_3:+5034273 None:intergenic
AGGACGACGGAGAATTACGG+CGG 0.797261 8_3:+5041847 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTATATTTGTTCTTT+AGG - chr8_3:5034662-5034681 Msa1271600:CDS 10.0%
!! ATATATATATATCAAAAACA+AGG + chr8_3:5035078-5035097 None:intergenic 10.0%
!! ATAGTATAAATTATATTACA+AGG + chr8_3:5037400-5037419 None:intergenic 10.0%
!!! AAATCTTATTGTATTTTACT+TGG - chr8_3:5033370-5033389 Msa1271600:CDS 15.0%
!!! TAAATTAATGGTCTTTATTT+TGG - chr8_3:5034299-5034318 Msa1271600:CDS 15.0%
!!! AAATTAATGGTCTTTATTTT+GGG - chr8_3:5034300-5034319 Msa1271600:CDS 15.0%
!! CAAGATATATATAGATATTT+AGG - chr8_3:5034466-5034485 Msa1271600:intron 15.0%
!! ATATATAGATATTTAGGAAA+TGG - chr8_3:5034472-5034491 Msa1271600:intron 15.0%
!! AACTTTAAATTATTCTCTAA+AGG + chr8_3:5035304-5035323 None:intergenic 15.0%
!!! ACAAGACTTTTAATTTAAAT+TGG - chr8_3:5035411-5035430 Msa1271600:intron 15.0%
!! TTATGTTAAAGTGAATAAAA+TGG - chr8_3:5035869-5035888 Msa1271600:intron 15.0%
!! GTACAGTTAATAAAAAAAAA+GGG + chr8_3:5036156-5036175 None:intergenic 15.0%
!! AGTACAGTTAATAAAAAAAA+AGG + chr8_3:5036157-5036176 None:intergenic 15.0%
!! GATTTAAAGAAAATTTCAAA+AGG + chr8_3:5036330-5036349 None:intergenic 15.0%
!!! TATACTATTCTTCAAATTTT+TGG - chr8_3:5037417-5037436 Msa1271600:intron 15.0%
!! TAATTAACAAAAATAGTAAC+AGG + chr8_3:5038200-5038219 None:intergenic 15.0%
!!! CATAAAGAAAAACTTTAAAA+TGG + chr8_3:5039281-5039300 None:intergenic 15.0%
!!! CATTTTAAAGTTTTTCTTTA+TGG - chr8_3:5039279-5039298 Msa1271600:intron 15.0%
!! TAACATCAAATTATAAGTAA+TGG + chr8_3:5039443-5039462 None:intergenic 15.0%
!!! CTTATAATTTGATGTTATTT+TGG - chr8_3:5039446-5039465 Msa1271600:intron 15.0%
!!! AAAACTAACTTAAATTTTCA+GGG + chr8_3:5039785-5039804 None:intergenic 15.0%
!!! TAAAACTAACTTAAATTTTC+AGG + chr8_3:5039786-5039805 None:intergenic 15.0%
!!! TCAAATTTTATCTTTGATAT+AGG - chr8_3:5040407-5040426 Msa1271600:CDS 15.0%
!!! TTTGTTTCTATTATGTATTT+AGG - chr8_3:5040576-5040595 Msa1271600:intron 15.0%
!! ATAGATAGAAAGGAAAAAAA+TGG - chr8_3:5032952-5032971 Msa1271600:three_prime_UTR 20.0%
!!! AATTTTCTTTTTGGATGAAA+TGG - chr8_3:5033314-5033333 Msa1271600:intron 20.0%
!!! AGATTTTTTTTTTGCAAAGT+AGG + chr8_3:5033356-5033375 None:intergenic 20.0%
!!! ATTGTATTTTACTTGGATTT+CGG - chr8_3:5033377-5033396 Msa1271600:CDS 20.0%
!! TGATATGAAAATTAATGAGT+TGG - chr8_3:5033408-5033427 Msa1271600:CDS 20.0%
!!! AATAAGTTGAAAATATCCTA+TGG - chr8_3:5034102-5034121 Msa1271600:intron 20.0%
!!! ATAAGTTGAAAATATCCTAT+GGG - chr8_3:5034103-5034122 Msa1271600:intron 20.0%
!! AGTATAAACTATAGACTTTA+GGG + chr8_3:5034961-5034980 None:intergenic 20.0%
!! TAGATAATATCCTTATTGTT+AGG + chr8_3:5035259-5035278 None:intergenic 20.0%
!! TCCTCATATATAATATATGT+TGG + chr8_3:5035658-5035677 None:intergenic 20.0%
!! AACATATATTATATATGAGG+AGG - chr8_3:5035657-5035676 Msa1271600:intron 20.0%
!! AAGTGATATTGTAGTAAATA+TGG + chr8_3:5035785-5035804 None:intergenic 20.0%
!!! AGATACCTTATTTTAAGTAA+AGG - chr8_3:5035835-5035854 Msa1271600:intron 20.0%
!!! GATACCTTATTTTAAGTAAA+GGG - chr8_3:5035836-5035855 Msa1271600:intron 20.0%
!! TTATCCCTTTACTTAAAATA+AGG + chr8_3:5035843-5035862 None:intergenic 20.0%
!!! TCTTTCAAGAATTTTAAATG+TGG - chr8_3:5036202-5036221 Msa1271600:CDS 20.0%
!!! AATTCAAAAAGTGCAAAAAT+AGG - chr8_3:5036297-5036316 Msa1271600:intron 20.0%
!!! ATTCAAAAAGTGCAAAAATA+GGG - chr8_3:5036298-5036317 Msa1271600:intron 20.0%
!! TATACTATTACTAATGCATT+TGG - chr8_3:5036555-5036574 Msa1271600:intron 20.0%
!! ATGAAGAGATATTTGTAAAA+CGG + chr8_3:5036870-5036889 None:intergenic 20.0%
!! TATTGCAATTCTACATATAT+AGG - chr8_3:5037117-5037136 Msa1271600:intron 20.0%
!! TCAAAATAAACTAAACTAGA+TGG - chr8_3:5037203-5037222 Msa1271600:intron 20.0%
!!! TATCCTTCAAGTTTTTAATT+AGG - chr8_3:5037346-5037365 Msa1271600:intron 20.0%
!!! ATCCTTCAAGTTTTTAATTA+GGG - chr8_3:5037347-5037366 Msa1271600:intron 20.0%
!! TGTTTGTATTAGAATGTATT+TGG - chr8_3:5037451-5037470 Msa1271600:intron 20.0%
!!! CATAATTGCTATAAATGTTT+TGG - chr8_3:5037542-5037561 Msa1271600:intron 20.0%
!!! TAGAATTTTGGTAAAACAAT+TGG - chr8_3:5037567-5037586 Msa1271600:intron 20.0%
!!! AGAATTTTGGTAAAACAATT+GGG - chr8_3:5037568-5037587 Msa1271600:intron 20.0%
!!! TTAATTAACGGATATATGAT+TGG - chr8_3:5037694-5037713 Msa1271600:intron 20.0%
!! CTGATCAATTCAATTAATAT+AGG - chr8_3:5037826-5037845 Msa1271600:intron 20.0%
!! TCAAAAGTTTAGTAGTAAAT+TGG + chr8_3:5038332-5038351 None:intergenic 20.0%
!!! TTTGATAGTAACTAAAATGA+TGG - chr8_3:5038347-5038366 Msa1271600:intron 20.0%
!!! GAATAGATTTCTAAAATGAA+TGG + chr8_3:5038397-5038416 None:intergenic 20.0%
!! GTTCATTATACAAAATGTTA+GGG - chr8_3:5038590-5038609 Msa1271600:intron 20.0%
!!! TCTGATTAATTTCATTGATT+AGG - chr8_3:5038705-5038724 Msa1271600:intron 20.0%
!!! CTGATTAATTTCATTGATTA+GGG - chr8_3:5038706-5038725 Msa1271600:intron 20.0%
!!! GTTGTTTTTTTTTAAATGCA+AGG - chr8_3:5038906-5038925 Msa1271600:intron 20.0%
!!! TCTTTTTATCTTATTTAGCA+AGG - chr8_3:5038948-5038967 Msa1271600:intron 20.0%
!!! AATTCTTTTGCATTACATTT+GGG + chr8_3:5039022-5039041 None:intergenic 20.0%
!!! TAATTCTTTTGCATTACATT+TGG + chr8_3:5039023-5039042 None:intergenic 20.0%
!! AATAATTAGAATCAATCTCT+AGG + chr8_3:5039056-5039075 None:intergenic 20.0%
!!! AATATGCAATTGATTTGTAA+TGG - chr8_3:5039574-5039593 Msa1271600:intron 20.0%
!!! ATATGCAATTGATTTGTAAT+GGG - chr8_3:5039575-5039594 Msa1271600:intron 20.0%
!!! ATCGTTTTTTATTTGATCTT+GGG + chr8_3:5039679-5039698 None:intergenic 20.0%
!!! AATCGTTTTTTATTTGATCT+TGG + chr8_3:5039680-5039699 None:intergenic 20.0%
!!! TAATAACAAATTTGTTGAAG+CGG - chr8_3:5040147-5040166 Msa1271600:CDS 20.0%
!! AATCTTGTTAAAGAAATTTC+CGG - chr8_3:5040237-5040256 Msa1271600:intron 20.0%
!!! TGCAATTAATCAAAATTTTG+AGG - chr8_3:5040470-5040489 Msa1271600:CDS 20.0%
!!! AATTAATCAAAATTTTGAGG+TGG - chr8_3:5040473-5040492 Msa1271600:CDS 20.0%
!!! TGAAATTTTCTGTTATCAAT+TGG - chr8_3:5040847-5040866 Msa1271600:intron 20.0%
!! TAAAGATAATATCTAGAAAC+AGG + chr8_3:5040975-5040994 None:intergenic 20.0%
!! AATGTAATCTTAGTAAATGA+AGG + chr8_3:5041711-5041730 None:intergenic 20.0%
!! GAAATAGTAAATAATGATGA+TGG + chr8_3:5041886-5041905 None:intergenic 20.0%
!! AATATTATAACATAACCTAG+AGG + chr8_3:5042065-5042084 None:intergenic 20.0%
! GAATGAAATTGTTCATCAAA+GGG + chr8_3:5033012-5033031 None:intergenic 25.0%
! TGAATGAAATTGTTCATCAA+AGG + chr8_3:5033013-5033032 None:intergenic 25.0%
!! AAGCTTCGAAATTTTCTTTT+TGG - chr8_3:5033305-5033324 Msa1271600:intron 25.0%
!! TTAAGTTGTTTGTCCTAAAA+GGG + chr8_3:5033684-5033703 None:intergenic 25.0%
!! ATTAAGTTGTTTGTCCTAAA+AGG + chr8_3:5033685-5033704 None:intergenic 25.0%
! ATCGACACATGTTATTATAT+TGG + chr8_3:5033796-5033815 None:intergenic 25.0%
!! GTCAATCCAAATTTTCAAAT+AGG - chr8_3:5034180-5034199 Msa1271600:intron 25.0%
!!! TTCTTTAGGATAAATGTTGT+TGG - chr8_3:5034676-5034695 Msa1271600:CDS 25.0%
! GGAAGTTATATATGTTCTTT+AGG - chr8_3:5034710-5034729 Msa1271600:CDS 25.0%
!!! TTCTTTAGGATAAATGTTGT+TGG - chr8_3:5034676-5034695 Msa1271600:CDS 25.0%
! CAGTATAAACTATAGACTTT+AGG + chr8_3:5034962-5034981 None:intergenic 25.0%
! CTAAAGTCTATAGTTTATAC+TGG - chr8_3:5034960-5034979 Msa1271600:CDS 25.0%
! AGAGTTAGTATTTATCAAGT+TGG + chr8_3:5035170-5035189 None:intergenic 25.0%
! AACAAAAAGTCCTAACAATA+AGG - chr8_3:5035246-5035265 Msa1271600:intron 25.0%
!! AAATCTTATTAAGTTGCCAA+AGG + chr8_3:5035575-5035594 None:intergenic 25.0%
! GCCAACATATATTATATATG+AGG - chr8_3:5035654-5035673 Msa1271600:intron 25.0%
! TACAATACACCAAAAATAGT+GGG - chr8_3:5036082-5036101 Msa1271600:intron 25.0%
!! TTCAAAAAGTGCAAAAATAG+GGG - chr8_3:5036299-5036318 Msa1271600:intron 25.0%
! AGACAATAAATAACATGAGA+AGG + chr8_3:5036364-5036383 None:intergenic 25.0%
!! TCATGTTATTTATTGTCTTC+AGG - chr8_3:5036366-5036385 Msa1271600:intron 25.0%
!! CATGTTATTTATTGTCTTCA+GGG - chr8_3:5036367-5036386 Msa1271600:intron 25.0%
!! ATGTTATTTATTGTCTTCAG+GGG - chr8_3:5036368-5036387 Msa1271600:intron 25.0%
! AGCAATGATAACAAACAAAA+GGG + chr8_3:5036531-5036550 None:intergenic 25.0%
!!! CTACCTTATTCTATTTTTGT+TGG - chr8_3:5036637-5036656 Msa1271600:intron 25.0%
! GAAAAAGTAAGAAAGAACAA+GGG + chr8_3:5036675-5036694 None:intergenic 25.0%
! TGAAAAAGTAAGAAAGAACA+AGG + chr8_3:5036676-5036695 None:intergenic 25.0%
! ATGTTAAAAAGAATGACAGA+TGG + chr8_3:5036716-5036735 None:intergenic 25.0%
! TGAAGAGATATTTGTAAAAC+GGG + chr8_3:5036869-5036888 None:intergenic 25.0%
! GTTTAGAAAATAAACTACCT+TGG + chr8_3:5036969-5036988 None:intergenic 25.0%
! TTCTAAACTTTATCTGCTTA+AGG - chr8_3:5036981-5037000 Msa1271600:intron 25.0%
!! ACAATCTAAAACAATAGTCT+AGG - chr8_3:5037063-5037082 Msa1271600:CDS 25.0%
! AAACTCAATGAATAACAAGT+AGG - chr8_3:5037090-5037109 Msa1271600:CDS 25.0%
!!! AATGTTTTGGAGTAGAATTT+TGG - chr8_3:5037555-5037574 Msa1271600:intron 25.0%
! ATCTTTATCTTGTTACTGTA+AGG - chr8_3:5037647-5037666 Msa1271600:intron 25.0%
!!! GATATTTTAACAGACTAGTT+TGG - chr8_3:5038061-5038080 Msa1271600:intron 25.0%
! TTAACAAAAATAGTAACAGG+TGG + chr8_3:5038197-5038216 None:intergenic 25.0%
! AACATTAAAAAATGGCAACA+AGG + chr8_3:5038424-5038443 None:intergenic 25.0%
! GGTTCATTATACAAAATGTT+AGG - chr8_3:5038589-5038608 Msa1271600:intron 25.0%
!! TATCTTATTTAGCAAGGATT+AGG - chr8_3:5038954-5038973 Msa1271600:intron 25.0%
!! ATCTTATTTAGCAAGGATTA+GGG - chr8_3:5038955-5038974 Msa1271600:intron 25.0%
!! ATAGAAAATGAAGTTTTCCT+TGG + chr8_3:5039122-5039141 None:intergenic 25.0%
!! TTAAAGTTTTTCTTTATGGC+AGG - chr8_3:5039283-5039302 Msa1271600:intron 25.0%
!! TTTGAAAAAGTATACGAGAT+TGG - chr8_3:5039314-5039333 Msa1271600:intron 25.0%
! CAAATCAATTGCATATTTGT+AGG + chr8_3:5039571-5039590 None:intergenic 25.0%
!!! AATTGATTTGTAATGGGAAA+GGG - chr8_3:5039581-5039600 Msa1271600:intron 25.0%
! CAAATAAAAAACGATTGTTC+AGG - chr8_3:5039684-5039703 Msa1271600:intron 25.0%
!!! AATAACAAATTTGTTGAAGC+GGG - chr8_3:5040148-5040167 Msa1271600:CDS 25.0%
! ATCTTGTTAAAGAAATTTCC+GGG - chr8_3:5040238-5040257 Msa1271600:intron 25.0%
! GTAAAAAATGTTGCCAAAAA+GGG + chr8_3:5040517-5040536 None:intergenic 25.0%
! TGTAAAAAATGTTGCCAAAA+AGG + chr8_3:5040518-5040537 None:intergenic 25.0%
! AAATTTCAACTTCAATGGAA+TGG + chr8_3:5040835-5040854 None:intergenic 25.0%
! ACAGAAAATTTCAACTTCAA+TGG + chr8_3:5040840-5040859 None:intergenic 25.0%
! TAATCAATTCATATTGTTCC+TGG - chr8_3:5040907-5040926 Msa1271600:intron 25.0%
! AACAAAAAAGTAGTGAACAA+TGG + chr8_3:5040943-5040962 None:intergenic 25.0%
! AAAAGAAGGAATAGAAAATG+AGG - chr8_3:5041552-5041571 Msa1271600:intron 25.0%
! TAAATGAAGGTTAAAAGGAA+GGG + chr8_3:5041698-5041717 None:intergenic 25.0%
! CTTAGTAAATGAAGGTTAAA+AGG + chr8_3:5041703-5041722 None:intergenic 25.0%
! TGAATTATTTGTATACCACA+TGG - chr8_3:5041948-5041967 Msa1271600:CDS 25.0%
!!! TCTTGGCTTAATTATTTTGA+TGG - chr8_3:5042037-5042056 Msa1271600:five_prime_UTR 25.0%
CGTAAAAAGAGATATGTAAG+CGG - chr8_3:5032908-5032927 Msa1271600:three_prime_UTR 30.0%
GATAGAAAGGAAAAAAATGG+TGG - chr8_3:5032955-5032974 Msa1271600:three_prime_UTR 30.0%
! TTCTACACAAATGTGGTTTT+TGG + chr8_3:5033508-5033527 None:intergenic 30.0%
GAAGATAGACAAAATTGCAT+CGG - chr8_3:5033538-5033557 Msa1271600:intron 30.0%
AAGATAGACAAAATTGCATC+GGG - chr8_3:5033539-5033558 Msa1271600:intron 30.0%
! CTTGATTGTTGTTGTTATGA+TGG - chr8_3:5033627-5033646 Msa1271600:intron 30.0%
! TAAAATATGTCAGCCCTTTT+AGG - chr8_3:5033668-5033687 Msa1271600:intron 30.0%
CTATTAGTGTCAACATGTTT+GGG + chr8_3:5033751-5033770 None:intergenic 30.0%
ACTATTAGTGTCAACATGTT+TGG + chr8_3:5033752-5033771 None:intergenic 30.0%
! ATAATAACATGTGTCGATGT+CGG - chr8_3:5033798-5033817 Msa1271600:intron 30.0%
AGTCCCAAAGAATGATAATT+GGG + chr8_3:5034207-5034226 None:intergenic 30.0%
TAGTCCCAAAGAATGATAAT+TGG + chr8_3:5034208-5034227 None:intergenic 30.0%
!! TTTTGTTGTGTTTCTGTCAA+AGG - chr8_3:5034274-5034293 Msa1271600:intron 30.0%
! TTTGTTGTGTTTCTGTCAAA+GGG - chr8_3:5034275-5034294 Msa1271600:intron 30.0%
CTGTCAAAGGGATAAATTAA+TGG - chr8_3:5034287-5034306 Msa1271600:CDS 30.0%
ACAAATATACAGAACAGAGT+TGG + chr8_3:5034369-5034388 None:intergenic 30.0%
ACTCTGTTCTGTATATTTGT+AGG - chr8_3:5034369-5034388 Msa1271600:intron 30.0%
GAATGATCATGTATCTATTG+CGG - chr8_3:5034513-5034532 Msa1271600:intron 30.0%
AATGATCATGTATCTATTGC+GGG - chr8_3:5034514-5034533 Msa1271600:intron 30.0%
! ATGTTGTTGGTAGATTCTAA+TGG - chr8_3:5034689-5034708 Msa1271600:CDS 30.0%
! ATGTTGTTGGTAGATTCTAA+CGG - chr8_3:5034689-5034708 Msa1271600:CDS 30.0%
! TTGAAGGCATATGTTGATAT+TGG - chr8_3:5034823-5034842 Msa1271600:intron 30.0%
! GTTGATATTGGTGATATACT+AGG - chr8_3:5034835-5034854 Msa1271600:intron 30.0%
ACAATTAAACGCACAGAAAA+AGG - chr8_3:5034868-5034887 Msa1271600:intron 30.0%
!! AAAAGGTATTACCTAGGAAT+TGG - chr8_3:5034885-5034904 Msa1271600:intron 30.0%
!!! TACCTAGGAATTGGTTTTTT+CGG - chr8_3:5034894-5034913 Msa1271600:CDS 30.0%
! TTAGTGAAGATGAGAGTTTT+GGG - chr8_3:5035196-5035215 Msa1271600:intron 30.0%
! TTTTCTTCTTTTTGTGCCTT+TGG - chr8_3:5035556-5035575 Msa1271600:intron 30.0%
TCAAATATAGAATCGTGAAG+AGG - chr8_3:5035594-5035613 Msa1271600:CDS 30.0%
!!! GTTTTTGAGTTGTATATCCT+TGG + chr8_3:5035760-5035779 None:intergenic 30.0%
TGAATGAGGACAAATTAAGT+TGG - chr8_3:5035934-5035953 Msa1271600:intron 30.0%
AAGATTAACTGTACTCAATG+AGG - chr8_3:5035957-5035976 Msa1271600:intron 30.0%
AGATTAACTGTACTCAATGA+GGG - chr8_3:5035958-5035977 Msa1271600:intron 30.0%
GTACAATACACCAAAAATAG+TGG - chr8_3:5036081-5036100 Msa1271600:intron 30.0%
AATAAAAAAAAAGGGCAACC+CGG + chr8_3:5036148-5036167 None:intergenic 30.0%
TACAGTGTGTAAAAAGTGAA+AGG + chr8_3:5036268-5036287 None:intergenic 30.0%
! TCAAAAAGTGCAAAAATAGG+GGG - chr8_3:5036300-5036319 Msa1271600:intron 30.0%
CAATAAATAACATGAGAAGG+TGG + chr8_3:5036361-5036380 None:intergenic 30.0%
CAGCAATGATAACAAACAAA+AGG + chr8_3:5036532-5036551 None:intergenic 30.0%
GCTCCAACAAAAATAGAATA+AGG + chr8_3:5036643-5036662 None:intergenic 30.0%
!!! CTTTCTTACTTTTTCATCTC+TGG - chr8_3:5036680-5036699 Msa1271600:intron 30.0%
CACCCTAATTAAAAACTTGA+AGG + chr8_3:5037352-5037371 None:intergenic 30.0%
GAATGTATTTGGTCATCAAT+AGG - chr8_3:5037462-5037481 Msa1271600:intron 30.0%
GCTTGTATGCTGTTAATTAA+CGG - chr8_3:5037682-5037701 Msa1271600:intron 30.0%
TATAGGTTGTATCAGAGATA+CGG - chr8_3:5037843-5037862 Msa1271600:intron 30.0%
CTACAAAGACAAAATTGTGT+AGG + chr8_3:5037940-5037959 None:intergenic 30.0%
! CTACACAATTTTGTCTTTGT+AGG - chr8_3:5037938-5037957 Msa1271600:intron 30.0%
!!! TTTTAACAGACTAGTTTGGT+AGG - chr8_3:5038065-5038084 Msa1271600:intron 30.0%
CTTGAAAGTCAGATTGATAT+AGG - chr8_3:5038140-5038159 Msa1271600:intron 30.0%
GAGTCAAACAAAAACAATGA+AGG + chr8_3:5038299-5038318 None:intergenic 30.0%
!!! ATTGTTTTTGTTTGACTCCT+TGG - chr8_3:5038301-5038320 Msa1271600:intron 30.0%
TGTGAGCGAACATTAAAAAA+TGG + chr8_3:5038432-5038451 None:intergenic 30.0%
TAATTGCATTGCTCAATAGA+AGG + chr8_3:5038507-5038526 None:intergenic 30.0%
GTGAATCTGGAAACATTATA+TGG + chr8_3:5038625-5038644 None:intergenic 30.0%
TTAAATGCAAGGAAATGTTG+AGG - chr8_3:5038917-5038936 Msa1271600:intron 30.0%
! AAAATGAAGTTTTCCTTGGA+AGG + chr8_3:5039118-5039137 None:intergenic 30.0%
!! ACACAGGTTTTTCAAAAAGT+TGG + chr8_3:5039180-5039199 None:intergenic 30.0%
CAATCTCAAACTATTACTAG+AGG + chr8_3:5039219-5039238 None:intergenic 30.0%
GGTCGAATATTTAGAAATGA+AGG - chr8_3:5039335-5039354 Msa1271600:intron 30.0%
AATATCAACTCGTCATAATC+CGG - chr8_3:5039358-5039377 Msa1271600:intron 30.0%
ACCTCTATAGTTGTAAATTC+CGG + chr8_3:5039380-5039399 None:intergenic 30.0%
!! CAATTGATTTGTAATGGGAA+AGG - chr8_3:5039580-5039599 Msa1271600:intron 30.0%
GATTTGAAAAAGTTTCACGA+CGG + chr8_3:5039728-5039747 None:intergenic 30.0%
!! GACAATTGTTGATTCACATT+AGG + chr8_3:5039750-5039769 None:intergenic 30.0%
!!! GTTAGTTTTAGTACTTGAGA+CGG - chr8_3:5039796-5039815 Msa1271600:intron 30.0%
!!! TTAGTTTTAGTACTTGAGAC+GGG - chr8_3:5039797-5039816 Msa1271600:intron 30.0%
! AAAGCTTACTGTTGATTATC+AGG - chr8_3:5040066-5040085 Msa1271600:intron 30.0%
! TAGAAGACTGTTGAAGTTTT+AGG + chr8_3:5040111-5040130 None:intergenic 30.0%
TTCTTTAACAAGATTGTGCA+TGG + chr8_3:5040232-5040251 None:intergenic 30.0%
GTTATCAAGATTCTTTCCAA+GGG + chr8_3:5040322-5040341 None:intergenic 30.0%
TGTTATCAAGATTCTTTCCA+AGG + chr8_3:5040323-5040342 None:intergenic 30.0%
! TGGAAAGAATCTTGATAACA+AGG - chr8_3:5040323-5040342 Msa1271600:intron 30.0%
! TACATATTGACATCCCTTTT+TGG - chr8_3:5040501-5040520 Msa1271600:CDS 30.0%
! AGTCTAAAACAAATGTAGGT+TGG + chr8_3:5040633-5040652 None:intergenic 30.0%
TGTATGGTACTTTCTACTTT+AGG + chr8_3:5040773-5040792 None:intergenic 30.0%
!! GTAGAAAGTACCATACAATT+TGG - chr8_3:5040776-5040795 Msa1271600:intron 30.0%
TGTAAGAGATCCAAATTGTA+TGG + chr8_3:5040789-5040808 None:intergenic 30.0%
AATGAAAAGTTCAAACCTCT+CGG + chr8_3:5041036-5041055 None:intergenic 30.0%
! AGGTTTGAACTTTTCATTTG+TGG - chr8_3:5041038-5041057 Msa1271600:intron 30.0%
! TTGAACTTTTCATTTGTGGT+CGG - chr8_3:5041042-5041061 Msa1271600:intron 30.0%
!!! AACACATCGTTTTTAGTTTG+TGG + chr8_3:5041168-5041187 None:intergenic 30.0%
ATTTCTCATCGTATACAACA+TGG - chr8_3:5041199-5041218 Msa1271600:intron 30.0%
TTTCTCATCGTATACAACAT+GGG - chr8_3:5041200-5041219 Msa1271600:intron 30.0%
AAAAAGAAAAAAACCCTGGT+AGG - chr8_3:5041223-5041242 Msa1271600:intron 30.0%
TAACACCTTAACAAGATAGA+TGG - chr8_3:5041358-5041377 Msa1271600:intron 30.0%
!!! TGGTTGCATTTTTTTTTACC+TGG - chr8_3:5041455-5041474 Msa1271600:intron 30.0%
GTTGTCTAATTTGATCTTCT+AGG + chr8_3:5041492-5041511 None:intergenic 30.0%
ACAAATGGTGGTAAAAAAGA+AGG - chr8_3:5041538-5041557 Msa1271600:intron 30.0%
AAATGAAGGTTAAAAGGAAG+GGG + chr8_3:5041697-5041716 None:intergenic 30.0%
GTAAATGAAGGTTAAAAGGA+AGG + chr8_3:5041699-5041718 None:intergenic 30.0%
ACTAAGATTACATTCTTTCC+AGG - chr8_3:5041717-5041736 Msa1271600:intron 30.0%
CTAAGATTACATTCTTTCCA+GGG - chr8_3:5041718-5041737 Msa1271600:intron 30.0%
TAAGATTACATTCTTTCCAG+GGG - chr8_3:5041719-5041738 Msa1271600:intron 30.0%
AACAAAACTGTCCTTATTGT+TGG + chr8_3:5041825-5041844 None:intergenic 30.0%
ATGCTTAATCAAATTCCATG+TGG + chr8_3:5041966-5041985 None:intergenic 30.0%
!! AAAGAGCATCATGAATTCAA+AGG - chr8_3:5042006-5042025 Msa1271600:exon 30.0%
ATTCAAAGGTTATCTTGTCT+TGG - chr8_3:5042020-5042039 Msa1271600:five_prime_UTR 30.0%
!!! ATTATTTTGATGGTTCCTCT+AGG - chr8_3:5042047-5042066 Msa1271600:five_prime_UTR 30.0%
AAAAAGAGATATGTAAGCGG+AGG - chr8_3:5032911-5032930 Msa1271600:three_prime_UTR 35.0%
CTGATACTCGATAGATAGAA+AGG - chr8_3:5032942-5032961 Msa1271600:three_prime_UTR 35.0%
AGAAAGGAAAAAAATGGTGG+AGG - chr8_3:5032958-5032977 Msa1271600:three_prime_UTR 35.0%
TGAAACTGTTGAACCTAACA+TGG - chr8_3:5032984-5033003 Msa1271600:three_prime_UTR 35.0%
TCGCTGAATAACTTCAATGT+TGG - chr8_3:5033234-5033253 Msa1271600:intron 35.0%
GCAAAGTAGGAGCAAAAATA+CGG + chr8_3:5033343-5033362 None:intergenic 35.0%
! TACTAGCTTCTACACAAATG+TGG + chr8_3:5033515-5033534 None:intergenic 35.0%
AAACCAAACACACACTTAGT+GGG - chr8_3:5033598-5033617 Msa1271600:intron 35.0%
! GATTGTTGTTGTTATGATGG+TGG - chr8_3:5033630-5033649 Msa1271600:intron 35.0%
CTTATGATCGAATGTGTATC+CGG + chr8_3:5033827-5033846 None:intergenic 35.0%
ACACATTCGATCATAAGTGT+CGG - chr8_3:5033830-5033849 Msa1271600:intron 35.0%
!! GCTGTTTTCATAAGCTATTC+TGG - chr8_3:5034067-5034086 Msa1271600:intron 35.0%
TATCCTATGGGCATGTTAAT+AGG - chr8_3:5034115-5034134 Msa1271600:intron 35.0%
TTGGGGCCTATTTGAAAATT+TGG + chr8_3:5034189-5034208 None:intergenic 35.0%
GTCCCAAAGAATGATAATTG+GGG + chr8_3:5034206-5034225 None:intergenic 35.0%
GTTGAAGAACTTAGAAGCAA+GGG - chr8_3:5034391-5034410 Msa1271600:intron 35.0%
TTGAAGAACTTAGAAGCAAG+GGG - chr8_3:5034392-5034411 Msa1271600:intron 35.0%
TTGTTCCACTCATAAGCATA+GGG + chr8_3:5034424-5034443 None:intergenic 35.0%
TTTGTTCCACTCATAAGCAT+AGG + chr8_3:5034425-5034444 None:intergenic 35.0%
ATCGTCTCTTAGTGTCAAAA+AGG + chr8_3:5034575-5034594 None:intergenic 35.0%
!! CACAGAAAAAGGTATTACCT+AGG - chr8_3:5034879-5034898 Msa1271600:intron 35.0%
TACCGAAAAAACCAATTCCT+AGG + chr8_3:5034899-5034918 None:intergenic 35.0%
!!! GACTTCGTTTTTTTACATGG+CGG + chr8_3:5035009-5035028 None:intergenic 35.0%
!!! CCAGACTTCGTTTTTTTACA+TGG + chr8_3:5035012-5035031 None:intergenic 35.0%
CCATGTAAAAAAACGAAGTC+TGG - chr8_3:5035009-5035028 Msa1271600:intron 35.0%
GAGGAATTCACACAAATCAT+TGG + chr8_3:5035047-5035066 None:intergenic 35.0%
! CTTAGTGAAGATGAGAGTTT+TGG - chr8_3:5035195-5035214 Msa1271600:intron 35.0%
! AAGATCCATTTGGGCTTTAA+GGG + chr8_3:5035464-5035483 None:intergenic 35.0%
TCTTAACCTCTTGTGAAAGT+TGG - chr8_3:5035519-5035538 Msa1271600:intron 35.0%
ACATTGAATTCACCAATCCA+AGG - chr8_3:5035740-5035759 Msa1271600:intron 35.0%
TGAGTTGTATATCCTTGGAT+TGG + chr8_3:5035755-5035774 None:intergenic 35.0%
! GAGTGGATTTCTAGATTTCT+TGG + chr8_3:5035911-5035930 None:intergenic 35.0%
GAAATCCACTCTAATGAATG+AGG - chr8_3:5035920-5035939 Msa1271600:intron 35.0%
TTTGTCCTCATTCATTAGAG+TGG + chr8_3:5035928-5035947 None:intergenic 35.0%
GATTAACTGTACTCAATGAG+GGG - chr8_3:5035959-5035978 Msa1271600:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG - chr8_3:5036000-5036019 Msa1271600:intron 35.0%
ACAACCTCTTGTGTAAAAAG+AGG - chr8_3:5036048-5036067 Msa1271600:intron 35.0%
CAACCTCTTGTGTAAAAAGA+GGG - chr8_3:5036049-5036068 Msa1271600:intron 35.0%
! TTACCCTCTTTTTACACAAG+AGG + chr8_3:5036055-5036074 None:intergenic 35.0%
TCTTGTGTAAAAAGAGGGTA+AGG - chr8_3:5036054-5036073 Msa1271600:intron 35.0%
!! ATGTTTGACTTGCATCTTTG+TGG - chr8_3:5036179-5036198 Msa1271600:CDS 35.0%
! CAAAAAGTGCAAAAATAGGG+GGG - chr8_3:5036301-5036320 Msa1271600:intron 35.0%
! GTGGAAGCAAAGATTTTGTA+AGG + chr8_3:5036425-5036444 None:intergenic 35.0%
GGGACACAAATACAATATTG+AGG + chr8_3:5036511-5036530 None:intergenic 35.0%
! CTATCCAATTTTCAGTCCAA+GGG + chr8_3:5036846-5036865 None:intergenic 35.0%
AGATATGATTGCAAATCCAG+AGG - chr8_3:5036919-5036938 Msa1271600:intron 35.0%
! AGAAACTGCTAGACATTTTC+TGG + chr8_3:5037162-5037181 None:intergenic 35.0%
TAATAGCAAAGATTTAGCGC+AGG + chr8_3:5037320-5037339 None:intergenic 35.0%
ACAGATAGTAGCTAAATGCT+TGG + chr8_3:5037797-5037816 None:intergenic 35.0%
! TTTGTAGGAGAAGTACATGT+AGG - chr8_3:5037953-5037972 Msa1271600:intron 35.0%
! TTGTAGGAGAAGTACATGTA+GGG - chr8_3:5037954-5037973 Msa1271600:intron 35.0%
CATATTTATGCAATGCTCTC+TGG - chr8_3:5038113-5038132 Msa1271600:intron 35.0%
AAAACAATGAAGGCAAGAAG+AGG + chr8_3:5038289-5038308 None:intergenic 35.0%
!! GTAGTAAATTGGTAATGCCA+AGG + chr8_3:5038321-5038340 None:intergenic 35.0%
TTGTCAAAGCTGTAACTAGA+TGG - chr8_3:5038535-5038554 Msa1271600:CDS 35.0%
TATACAGTACTTCGTTCCTA+AGG + chr8_3:5038561-5038580 None:intergenic 35.0%
!! GAACGAAGTACTGTATAACT+AGG - chr8_3:5038564-5038583 Msa1271600:CDS 35.0%
ATGGATATTCAGAGTGAATC+TGG + chr8_3:5038638-5038657 None:intergenic 35.0%
! ATACACTTGCATTTTGCACA+TGG - chr8_3:5038668-5038687 Msa1271600:intron 35.0%
TGCTATATTCATCACGAGTA+AGG - chr8_3:5038984-5039003 Msa1271600:intron 35.0%
AAAAACCTGTGTCTTGATCA+CGG - chr8_3:5039188-5039207 Msa1271600:intron 35.0%
! AAGTTTTTCTTTATGGCAGG+TGG - chr8_3:5039286-5039305 Msa1271600:intron 35.0%
! AGTTTTTCTTTATGGCAGGT+GGG - chr8_3:5039287-5039306 Msa1271600:intron 35.0%
TCCGGAATTTACAACTATAG+AGG - chr8_3:5039376-5039395 Msa1271600:intron 35.0%
! ATTAGTCTCTTGCAAATGCA+AGG - chr8_3:5039537-5039556 Msa1271600:intron 35.0%
TGGCAACAAAGCATAAAAGA+GGG + chr8_3:5039639-5039658 None:intergenic 35.0%
TTGGCAACAAAGCATAAAAG+AGG + chr8_3:5039640-5039659 None:intergenic 35.0%
GGGATTAGATATGTGAAGAT+TGG + chr8_3:5039659-5039678 None:intergenic 35.0%
CTGCTAAATTCATCATGCTT+TGG + chr8_3:5040009-5040028 None:intergenic 35.0%
AAGCATGATGAATTTAGCAG+AGG - chr8_3:5040009-5040028 Msa1271600:intron 35.0%
GAGTTGAGATATGTTTGGAA+AGG - chr8_3:5040190-5040209 Msa1271600:intron 35.0%
CAATTCATTGAAATCGATCC+CGG + chr8_3:5040259-5040278 None:intergenic 35.0%
! GGGATCGATTTCAATGAATT+GGG - chr8_3:5040258-5040277 Msa1271600:intron 35.0%
! GGGTAGTCTAAAACAAATGT+AGG + chr8_3:5040637-5040656 None:intergenic 35.0%
CCAATGGAGATATCTCAATT+GGG + chr8_3:5040657-5040676 None:intergenic 35.0%
! GTCTAAAATGTGTATACCTG+CGG + chr8_3:5040690-5040709 None:intergenic 35.0%
! ACTTTTGCGATGAAAACAAG+GGG + chr8_3:5040878-5040897 None:intergenic 35.0%
! GACTTTTGCGATGAAAACAA+GGG + chr8_3:5040879-5040898 None:intergenic 35.0%
! TGACTTTTGCGATGAAAACA+AGG + chr8_3:5040880-5040899 None:intergenic 35.0%
AACAATGGTGATCAAAATCC+AGG + chr8_3:5040928-5040947 None:intergenic 35.0%
! TGAACTTTTCATTTGTGGTC+GGG - chr8_3:5041043-5041062 Msa1271600:intron 35.0%
ATTGACTGATCCTATAGATC+AGG - chr8_3:5041088-5041107 Msa1271600:intron 35.0%
! CTTCCAAACTTTTCACATTC+AGG - chr8_3:5041115-5041134 Msa1271600:intron 35.0%
ATGCCTGAATGTGAAAAGTT+TGG + chr8_3:5041121-5041140 None:intergenic 35.0%
TGGGAAAAAGAAAAAAACCC+TGG - chr8_3:5041219-5041238 Msa1271600:intron 35.0%
CTTATATTCATCTCCTACCA+GGG + chr8_3:5041239-5041258 None:intergenic 35.0%
TCTTATATTCATCTCCTACC+AGG + chr8_3:5041240-5041259 None:intergenic 35.0%
TAGTTTGACGGTGAACAAAA+TGG - chr8_3:5041435-5041454 Msa1271600:intron 35.0%
AAAGCAGCTCTTTCAACAAA+TGG - chr8_3:5041523-5041542 Msa1271600:intron 35.0%
TCTTGACGATGATTTCCTAA+CGG - chr8_3:5041594-5041613 Msa1271600:intron 35.0%
TCTGTTTGCATGTCTTTGTT+TGG - chr8_3:5041660-5041679 Msa1271600:intron 35.0%
AATGAAGGTTAAAAGGAAGG+GGG + chr8_3:5041696-5041715 None:intergenic 35.0%
GCTATTACATCTCTAATGCT+GGG + chr8_3:5041784-5041803 None:intergenic 35.0%
TCATGATGCTCTTTCAACTA+AGG + chr8_3:5042000-5042019 None:intergenic 35.0%
TCATCAAAGGGTTCCATGTT+AGG + chr8_3:5033000-5033019 None:intergenic 40.0%
TTGAATAAGAAGAAGAGGCG+CGG + chr8_3:5033069-5033088 None:intergenic 40.0%
GGTGGTTGAATAAGAAGAAG+AGG + chr8_3:5033074-5033093 None:intergenic 40.0%
CGTGAGTTTGATCAAAAGTG+CGG - chr8_3:5033482-5033501 Msa1271600:intron 40.0%
GTGCGTTTGTGTGTTGTAAA+CGG - chr8_3:5033574-5033593 Msa1271600:intron 40.0%
TGCGTTTGTGTGTTGTAAAC+GGG - chr8_3:5033575-5033594 Msa1271600:intron 40.0%
GAAACCAAACACACACTTAG+TGG - chr8_3:5033597-5033616 Msa1271600:intron 40.0%
GTGCTACGATTAAGTGCTTA+TGG - chr8_3:5033852-5033871 Msa1271600:intron 40.0%
AGGCCCCAATTATCATTCTT+TGG - chr8_3:5034200-5034219 Msa1271600:intron 40.0%
GGCCCCAATTATCATTCTTT+GGG - chr8_3:5034201-5034220 Msa1271600:intron 40.0%
!! TATCATTCTTTGGGACTAGC+TGG - chr8_3:5034210-5034229 Msa1271600:intron 40.0%
GCTGGAACTTTCTCTGATTA+TGG - chr8_3:5034228-5034247 Msa1271600:intron 40.0%
GGTTGAAGAACTTAGAAGCA+AGG - chr8_3:5034390-5034409 Msa1271600:intron 40.0%
!! ATTGTTGCTAGGAGAGCATT+TGG - chr8_3:5034541-5034560 Msa1271600:intron 40.0%
TTGACACTAAGAGACGATTC+AGG - chr8_3:5034577-5034596 Msa1271600:intron 40.0%
TGACACTAAGAGACGATTCA+GGG - chr8_3:5034578-5034597 Msa1271600:intron 40.0%
GTTTCAGCTCTATTGCGAAA+AGG - chr8_3:5034774-5034793 Msa1271600:intron 40.0%
TGATCAGTTTGAGCAGTTGA+AGG - chr8_3:5034807-5034826 Msa1271600:intron 40.0%
GCGGTAACACAAAAATCAGA+TGG + chr8_3:5034990-5035009 None:intergenic 40.0%
TCTTCAGTTGCAGCAATACT+AGG + chr8_3:5035365-5035384 None:intergenic 40.0%
GTATTGCTGCAACTGAAGAT+TGG - chr8_3:5035366-5035385 Msa1271600:intron 40.0%
CAAGATCCATTTGGGCTTTA+AGG + chr8_3:5035465-5035484 None:intergenic 40.0%
CAACAACCAACTTTCACAAG+AGG + chr8_3:5035528-5035547 None:intergenic 40.0%
CACTCAAAGTGAGTTACTTC+TGG + chr8_3:5035695-5035714 None:intergenic 40.0%
CAGAAGTAACTCACTTTGAG+TGG - chr8_3:5035693-5035712 Msa1271600:intron 40.0%
CACTTGCCTATTATCTGAGA+CGG - chr8_3:5035800-5035819 Msa1271600:intron 40.0%
! ACTTGCCTATTATCTGAGAC+GGG - chr8_3:5035801-5035820 Msa1271600:intron 40.0%
! AATAAGGTATCTCCCTAGAC+TGG + chr8_3:5035827-5035846 None:intergenic 40.0%
! TTACACAAGAGGTTGTTTCC+AGG + chr8_3:5036044-5036063 None:intergenic 40.0%
CCACTTCCTGACAAATATCA+CGG - chr8_3:5036441-5036460 Msa1271600:intron 40.0%
GTTAGACCGTGATATTTGTC+AGG + chr8_3:5036450-5036469 None:intergenic 40.0%
GAGATGCTGTAGGAATATGA+AGG + chr8_3:5036808-5036827 None:intergenic 40.0%
ATGATAACTGGAGATGCTGT+AGG + chr8_3:5036818-5036837 None:intergenic 40.0%
! GCTATCCAATTTTCAGTCCA+AGG + chr8_3:5036847-5036866 None:intergenic 40.0%
!! TCATGTTTGCTGTCTACTTG+TGG - chr8_3:5036886-5036905 Msa1271600:intron 40.0%
! TTTGCTGTCTACTTGTGGTT+AGG - chr8_3:5036891-5036910 Msa1271600:intron 40.0%
!! AAACTACCTTGGCTCTTTTG+CGG + chr8_3:5036958-5036977 None:intergenic 40.0%
TGAGGTTGAGATATATGGCA+TGG + chr8_3:5037282-5037301 None:intergenic 40.0%
CTAATTACCTTTGGGCTTTG+AGG - chr8_3:5037597-5037616 Msa1271600:intron 40.0%
AAGAAGAGAATGTGAGGCTA+CGG + chr8_3:5037731-5037750 None:intergenic 40.0%
AGTAGCTAAATGCTTGGTCA+TGG + chr8_3:5037791-5037810 None:intergenic 40.0%
! GGATTCTTTAGGTTTCGTTG+AGG - chr8_3:5037874-5037893 Msa1271600:intron 40.0%
AATCCACAAACCTGCAAAAC+TGG + chr8_3:5037908-5037927 None:intergenic 40.0%
!! CGAAGTACTGTATAACTAGG+CGG - chr8_3:5038567-5038586 Msa1271600:CDS 40.0%
!! GAAGTACTGTATAACTAGGC+GGG - chr8_3:5038568-5038587 Msa1271600:CDS 40.0%
CTCTGAATATCCATATACCG+TGG - chr8_3:5038644-5038663 Msa1271600:intron 40.0%
CAAAATGCAAGTGTATGCCA+CGG + chr8_3:5038664-5038683 None:intergenic 40.0%
! TTCATTGATTAGGGAGAAGC+TGG - chr8_3:5038715-5038734 Msa1271600:intron 40.0%
GAATTGTGGTATGTCACGAA+TGG + chr8_3:5038757-5038776 None:intergenic 40.0%
GTGACATACCACAATTCTCT+TGG - chr8_3:5038760-5038779 Msa1271600:intron 40.0%
AGTCTCTTCCAAGAGAATTG+TGG + chr8_3:5038771-5038790 None:intergenic 40.0%
ATTGCACCTAAAGAGAATGC+TGG - chr8_3:5038813-5038832 Msa1271600:intron 40.0%
ATCTCACCAGCATTCTCTTT+AGG + chr8_3:5038822-5038841 None:intergenic 40.0%
! TTTTCCTTGGAAGGAAAGGA+TGG + chr8_3:5039109-5039128 None:intergenic 40.0%
! GAAGTTTTCCTTGGAAGGAA+AGG + chr8_3:5039113-5039132 None:intergenic 40.0%
AAAACCTGTGTCTTGATCAC+GGG - chr8_3:5039189-5039208 Msa1271600:intron 40.0%
!!! GTTATTTTGGATATCACGCG+TGG - chr8_3:5039459-5039478 Msa1271600:intron 40.0%
AAAAGTTTCACGACGGTTGT+TGG + chr8_3:5039721-5039740 None:intergenic 40.0%
CCTAAGCCATGAAAAGTTAG+GGG + chr8_3:5039841-5039860 None:intergenic 40.0%
GCCTAAGCCATGAAAAGTTA+GGG + chr8_3:5039842-5039861 None:intergenic 40.0%
AGCCTAAGCCATGAAAAGTT+AGG + chr8_3:5039843-5039862 None:intergenic 40.0%
ACATATCTCAACTCCCTGTA+CGG + chr8_3:5040184-5040203 None:intergenic 40.0%
ACAGGGAGTTGAGATATGTT+TGG - chr8_3:5040185-5040204 Msa1271600:intron 40.0%
! CGGGATCGATTTCAATGAAT+TGG - chr8_3:5040257-5040276 Msa1271600:intron 40.0%
TGAATTGGGAAATGATCTCG+AGG - chr8_3:5040272-5040291 Msa1271600:intron 40.0%
AATCAACCTCGTTAAGTAGG+TGG + chr8_3:5040383-5040402 None:intergenic 40.0%
! ACCTACTTAACGAGGTTGAT+TGG - chr8_3:5040382-5040401 Msa1271600:CDS 40.0%
! AATGTAGGTTGGATGAGCTT+TGG + chr8_3:5040622-5040641 None:intergenic 40.0%
CCCAATTGAGATATCTCCAT+TGG - chr8_3:5040654-5040673 Msa1271600:intron 40.0%
GCCAATGGAGATATCTCAAT+TGG + chr8_3:5040658-5040677 None:intergenic 40.0%
TGGAAGCTTACCTGATCTAT+AGG + chr8_3:5041101-5041120 None:intergenic 40.0%
CCATGCCATCTATCTTGTTA+AGG + chr8_3:5041366-5041385 None:intergenic 40.0%
CCTTAACAAGATAGATGGCA+TGG - chr8_3:5041363-5041382 Msa1271600:intron 40.0%
CCAACGTAGCAATAGTTTGA+CGG - chr8_3:5041423-5041442 Msa1271600:intron 40.0%
!!! TTTTTTTTTACCTGGCAGCG+AGG - chr8_3:5041463-5041482 Msa1271600:intron 40.0%
TTATGTACCATTCCAGAAGC+TGG + chr8_3:5041640-5041659 None:intergenic 40.0%
ATGAAGGTTAAAAGGAAGGG+GGG + chr8_3:5041695-5041714 None:intergenic 40.0%
GGCTATTACATCTCTAATGC+TGG + chr8_3:5041785-5041804 None:intergenic 40.0%
ATTGTTGGACCTTGAGTACT+GGG + chr8_3:5041810-5041829 None:intergenic 40.0%
TATTGTTGGACCTTGAGTAC+TGG + chr8_3:5041811-5041830 None:intergenic 40.0%
GTACTCAAGGTCCAACAATA+AGG - chr8_3:5041811-5041830 Msa1271600:CDS 40.0%
TCTTATTCAACCACCTCCTC+CGG - chr8_3:5033079-5033098 Msa1271600:three_prime_UTR 45.0%
AAGTACCTTCTTCAAGCGCA+TGG + chr8_3:5033170-5033189 None:intergenic 45.0%
TGTCCCACTAAGTGTGTGTT+TGG + chr8_3:5033604-5033623 None:intergenic 45.0%
AAACACACACTTAGTGGGAC+AGG - chr8_3:5033603-5033622 Msa1271600:intron 45.0%
GAGCCTATTAACATGCCCAT+AGG + chr8_3:5034121-5034140 None:intergenic 45.0%
TCGATCCCTATGCTTATGAG+TGG - chr8_3:5034416-5034435 Msa1271600:intron 45.0%
TTGCGGGAAGAATTGTTGCT+AGG - chr8_3:5034530-5034549 Msa1271600:intron 45.0%
AGACGATTCAGGGACAATTC+AGG - chr8_3:5034588-5034607 Msa1271600:CDS 45.0%
GGTGATATACTAGGTGCAAG+AGG - chr8_3:5034844-5034863 Msa1271600:intron 45.0%
CAAAAACAAGGCAGATGCAG+AGG + chr8_3:5035066-5035085 None:intergenic 45.0%
TTGCTGCAACTGAAGATTGG+AGG - chr8_3:5035369-5035388 Msa1271600:intron 45.0%
TTCCACCCTTAAAGCCCAAA+TGG - chr8_3:5035456-5035475 Msa1271600:intron 45.0%
!! ATCCATTTGGGCTTTAAGGG+TGG + chr8_3:5035461-5035480 None:intergenic 45.0%
CCCTAGCACAAGATCCATTT+GGG + chr8_3:5035473-5035492 None:intergenic 45.0%
CCCAAATGGATCTTGTGCTA+GGG - chr8_3:5035470-5035489 Msa1271600:intron 45.0%
CCAAATGGATCTTGTGCTAG+GGG - chr8_3:5035471-5035490 Msa1271600:intron 45.0%
TACTCAATGAGGGGTAACCT+TGG - chr8_3:5035968-5035987 Msa1271600:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG - chr8_3:5036004-5036023 Msa1271600:intron 45.0%
! GGAAAGGGTCCCACTATTTT+TGG + chr8_3:5036094-5036113 None:intergenic 45.0%
! AAAATAGTGGGACCCTTTCC+CGG - chr8_3:5036094-5036113 Msa1271600:intron 45.0%
ACATGAGAAGGTGGTAAAGC+TGG + chr8_3:5036352-5036371 None:intergenic 45.0%
CCGTGATATTTGTCAGGAAG+TGG + chr8_3:5036444-5036463 None:intergenic 45.0%
TAGATATACGCTATCGCCAG+AGG - chr8_3:5036475-5036494 Msa1271600:intron 45.0%
TTGAGGTACAAGCTTACCTC+TGG + chr8_3:5036494-5036513 None:intergenic 45.0%
CCAAGGGTGAGAATGATAAC+TGG + chr8_3:5036830-5036849 None:intergenic 45.0%
CCAGTTATCATTCTCACCCT+TGG - chr8_3:5036827-5036846 Msa1271600:intron 45.0%
CTCACCCTTGGACTGAAAAT+TGG - chr8_3:5036839-5036858 Msa1271600:intron 45.0%
GTTGAGATATATGGCATGGC+TGG + chr8_3:5037278-5037297 None:intergenic 45.0%
CTGGGTGAGGTTGAGATATA+TGG + chr8_3:5037287-5037306 None:intergenic 45.0%
ATTGCAACCTCAAAGCCCAA+AGG + chr8_3:5037607-5037626 None:intergenic 45.0%
CAGCAGAAGAAGAGAATGTG+AGG + chr8_3:5037737-5037756 None:intergenic 45.0%
AGGTTGTATCAGAGATACGG+AGG - chr8_3:5037846-5037865 Msa1271600:intron 45.0%
ATCAGAGATACGGAGGACAA+TGG - chr8_3:5037853-5037872 Msa1271600:intron 45.0%
! CGGAGGACAATGGATTCTTT+AGG - chr8_3:5037863-5037882 Msa1271600:intron 45.0%
! GGTTGAAACTCCAGTTTTGC+AGG - chr8_3:5037895-5037914 Msa1271600:intron 45.0%
! ACTCCAGTTTTGCAGGTTTG+TGG - chr8_3:5037902-5037921 Msa1271600:intron 45.0%
AGTACATGTAGGGAATCTGC+TGG - chr8_3:5037964-5037983 Msa1271600:intron 45.0%
AAGAGGAGGCAAATTGGTCA+AGG + chr8_3:5038272-5038291 None:intergenic 45.0%
ACAATGAAGGCAAGAAGAGG+AGG + chr8_3:5038286-5038305 None:intergenic 45.0%
AGCTGTAACTAGATGGCCTT+AGG - chr8_3:5038542-5038561 Msa1271600:CDS 45.0%
CAAGTGTATGCCACGGTATA+TGG + chr8_3:5038657-5038676 None:intergenic 45.0%
ATTGATTAGGGAGAAGCTGG+AGG - chr8_3:5038718-5038737 Msa1271600:intron 45.0%
! TGTCACGAATGGTCTAGCTT+CGG + chr8_3:5038746-5038765 None:intergenic 45.0%
GAATCCATCCTTTCCTTCCA+AGG - chr8_3:5039102-5039121 Msa1271600:intron 45.0%
! TTTTCTTTATGGCAGGTGGG+TGG - chr8_3:5039290-5039309 Msa1271600:intron 45.0%
TTTCTTTATGGCAGGTGGGT+GGG - chr8_3:5039291-5039310 Msa1271600:intron 45.0%
AAGGGTTGTGAATCCCACTA+TGG - chr8_3:5039599-5039618 Msa1271600:intron 45.0%
AACCAAGTGCTTGCCATAGT+GGG + chr8_3:5039615-5039634 None:intergenic 45.0%
! TTCCCTCCCCTAACTTTTCA+TGG - chr8_3:5039832-5039851 Msa1271600:intron 45.0%
AGCCATGAAAAGTTAGGGGA+GGG + chr8_3:5039837-5039856 None:intergenic 45.0%
AAGCCATGAAAAGTTAGGGG+AGG + chr8_3:5039838-5039857 None:intergenic 45.0%
! CCCCTAACTTTTCATGGCTT+AGG - chr8_3:5039838-5039857 Msa1271600:intron 45.0%
GGGTGTAATGATTCCGTACA+GGG - chr8_3:5040168-5040187 Msa1271600:CDS 45.0%
AGATATGTTTGGAAAGGCCC+TGG - chr8_3:5040196-5040215 Msa1271600:intron 45.0%
ATTGAAGCATGCCAATCTGC+CGG - chr8_3:5040357-5040376 Msa1271600:intron 45.0%
GCCAATCAACCTCGTTAAGT+AGG + chr8_3:5040386-5040405 None:intergenic 45.0%
AAATGTGTATACCTGCGGTG+TGG + chr8_3:5040685-5040704 None:intergenic 45.0%
TGATCCTCCATTAGATCCAC+AGG - chr8_3:5041005-5041024 Msa1271600:intron 45.0%
CAAACCTGTGGATCTAATGG+AGG + chr8_3:5041012-5041031 None:intergenic 45.0%
GGTCAAACCTGTGGATCTAA+TGG + chr8_3:5041015-5041034 None:intergenic 45.0%
TTCATTTGTGGTCGGGAACT+AGG - chr8_3:5041050-5041069 Msa1271600:intron 45.0%
CTTCTCTGCATGTTACGATG+TGG - chr8_3:5041271-5041290 Msa1271600:intron 45.0%
CCGTCAAACTATTGCTACGT+TGG + chr8_3:5041426-5041445 None:intergenic 45.0%
GCAGCTCTTTCAACAAATGG+TGG - chr8_3:5041526-5041545 Msa1271600:intron 45.0%
CGATGATTTCCTAACGGCTT+TGG - chr8_3:5041600-5041619 Msa1271600:intron 45.0%
!! TTCCTAACGGCTTTGGAGTA+TGG - chr8_3:5041607-5041626 Msa1271600:intron 45.0%
TTCCATACTCCAAAGCCGTT+AGG + chr8_3:5041612-5041631 None:intergenic 45.0%
TTACATTCTTTCCAGGGGCT+TGG - chr8_3:5041724-5041743 Msa1271600:intron 45.0%
TACATTCTTTCCAGGGGCTT+GGG - chr8_3:5041725-5041744 Msa1271600:intron 45.0%
AATAGCCTTCCCAGTACTCA+AGG - chr8_3:5041798-5041817 Msa1271600:CDS 45.0%
TGGAGGACGACGGAGAATTA+CGG + chr8_3:5033114-5033133 None:intergenic 50.0%
AATAGACTCCCTATCGGAGG+TGG + chr8_3:5033143-5033162 None:intergenic 50.0%
TCGAATAGACTCCCTATCGG+AGG + chr8_3:5033146-5033165 None:intergenic 50.0%
GGCTCGAATAGACTCCCTAT+CGG + chr8_3:5033149-5033168 None:intergenic 50.0%
GCCCAAATGGATCTTGTGCT+AGG - chr8_3:5035469-5035488 Msa1271600:intron 50.0%
CCCCTAGCACAAGATCCATT+TGG + chr8_3:5035474-5035493 None:intergenic 50.0%
ACTGGCCCGTCTCAGATAAT+AGG + chr8_3:5035809-5035828 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG + chr8_3:5035988-5036007 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG - chr8_3:5036010-5036029 Msa1271600:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG - chr8_3:5036011-5036030 Msa1271600:intron 50.0%
TGTGTTCCGCAAAAGAGCCA+AGG - chr8_3:5036949-5036968 Msa1271600:intron 50.0%
GGCAAGAAGAGGAGGCAAAT+TGG + chr8_3:5038278-5038297 None:intergenic 50.0%
ATGTCCCGTGATCAAGACAC+AGG + chr8_3:5039196-5039215 None:intergenic 50.0%
ATCACGCGTGGCACAACTAT+TGG - chr8_3:5039471-5039490 Msa1271600:intron 50.0%
ATCCCACTATGGCAAGCACT+TGG - chr8_3:5039610-5039629 Msa1271600:intron 50.0%
CAACCAAGTGCTTGCCATAG+TGG + chr8_3:5039616-5039635 None:intergenic 50.0%
CACGACGGTTGTTGGAATGT+TGG + chr8_3:5039713-5039732 None:intergenic 50.0%
CAGTGTGCTCTTGCAGTTCA+CGG - chr8_3:5040043-5040062 Msa1271600:intron 50.0%
CGGGTGTAATGATTCCGTAC+AGG - chr8_3:5040167-5040186 Msa1271600:CDS 50.0%
TATGTTTGGAAAGGCCCTGG+AGG - chr8_3:5040199-5040218 Msa1271600:intron 50.0%
CAAGCTACTCTGAGTACCCT+TGG - chr8_3:5040303-5040322 Msa1271600:intron 50.0%
GGCAGATTGGCATGCTTCAA+TGG + chr8_3:5040358-5040377 None:intergenic 50.0%
AACCTCGTTAAGTAGGTGGC+CGG + chr8_3:5040379-5040398 None:intergenic 50.0%
AAACCTCTCGGTCAAACCTG+TGG + chr8_3:5041024-5041043 None:intergenic 50.0%
! TTCAGGCATCGCAGCTTGTA+TGG - chr8_3:5041132-5041151 Msa1271600:intron 50.0%
! TCAGGCATCGCAGCTTGTAT+GGG - chr8_3:5041133-5041152 Msa1271600:intron 50.0%
TATGGAATGCCTCCAGCTTC+TGG - chr8_3:5041625-5041644 Msa1271600:intron 50.0%
! AATGCCTCCAGCTTCTGGAA+TGG - chr8_3:5041630-5041649 Msa1271600:intron 50.0%
TGTACCATTCCAGAAGCTGG+AGG + chr8_3:5041637-5041656 None:intergenic 50.0%
!! TTGGACCTTGAGTACTGGGA+AGG + chr8_3:5041806-5041825 None:intergenic 50.0%
AGAATTACGGCGGTTGCGAC+CGG + chr8_3:5033101-5033120 None:intergenic 55.0%
AGGACGACGGAGAATTACGG+CGG + chr8_3:5033111-5033130 None:intergenic 55.0%
CACCACTTCCACCTCCGATA+GGG - chr8_3:5033132-5033151 Msa1271600:exon 55.0%
TCGAGCCATGCGCTTGAAGA+AGG - chr8_3:5033162-5033181 Msa1271600:CDS 55.0%
! CATGTGTCGATGTCGGACAC+CGG - chr8_3:5033805-5033824 Msa1271600:intron 55.0%
! TATCTGAGACGGGCCAGTCT+AGG - chr8_3:5035811-5035830 Msa1271600:intron 55.0%
! ATCTGAGACGGGCCAGTCTA+GGG - chr8_3:5035812-5035831 Msa1271600:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG - chr8_3:5036023-5036042 Msa1271600:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG + chr8_3:5036121-5036140 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG + chr8_3:5036122-5036141 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - chr8_3:5036126-5036145 Msa1271600:intron 55.0%
CGGAACACATCAGCTACCTC+TGG + chr8_3:5036938-5036957 None:intergenic 55.0%
AGGCACACATGTACTGGGTG+AGG + chr8_3:5037300-5037319 None:intergenic 55.0%
AGCGCAGGCACACATGTACT+GGG + chr8_3:5037305-5037324 None:intergenic 55.0%
TAGCGCAGGCACACATGTAC+TGG + chr8_3:5037306-5037325 None:intergenic 55.0%
TGGAGTTGTTGCCACGTGAC+TGG - chr8_3:5039491-5039510 Msa1271600:intron 55.0%
AGTTGTTGCCACGTGACTGG+TGG - chr8_3:5039494-5039513 Msa1271600:intron 55.0%
ATCCATGACCACCAGTCACG+TGG + chr8_3:5039505-5039524 None:intergenic 55.0%
TTTGGAAAGGCCCTGGAGGA+GGG - chr8_3:5040203-5040222 Msa1271600:intron 55.0%
TAAGTAGGTGGCCGGCAGAT+TGG + chr8_3:5040371-5040390 None:intergenic 55.0%
CTGCGGTGTGGTTTAGCCAA+TGG + chr8_3:5040673-5040692 None:intergenic 55.0%
! CATTGGCTAAACCACACCGC+AGG - chr8_3:5040671-5040690 Msa1271600:intron 55.0%
GATCCACAGGTTTGACCGAG+AGG - chr8_3:5041018-5041037 Msa1271600:intron 55.0%
! GTGGAAGTGGTGGAGGACGA+CGG + chr8_3:5033124-5033143 None:intergenic 60.0%
ATCGGAGGTGGAAGTGGTGG+AGG + chr8_3:5033131-5033150 None:intergenic 60.0%
CCTATCGGAGGTGGAAGTGG+TGG + chr8_3:5033134-5033153 None:intergenic 60.0%
CCACCACTTCCACCTCCGAT+AGG - chr8_3:5033131-5033150 Msa1271600:exon 60.0%
CTCCCTATCGGAGGTGGAAG+TGG + chr8_3:5033137-5033156 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - chr8_3:5035977-5035996 Msa1271600:intron 60.0%
CATACGCAGGGTCCGGGAAA+GGG + chr8_3:5036109-5036128 None:intergenic 60.0%
TTTCCCGGACCCTGCGTATG+CGG - chr8_3:5036109-5036128 Msa1271600:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - chr8_3:5036127-5036146 Msa1271600:intron 60.0%
TGCCACGTGACTGGTGGTCA+TGG - chr8_3:5039500-5039519 Msa1271600:intron 60.0%
GTTTGGAAAGGCCCTGGAGG+AGG - chr8_3:5040202-5040221 Msa1271600:intron 60.0%
TGCATGGTCTCCCTCCTCCA+GGG + chr8_3:5040216-5040235 None:intergenic 60.0%
TGCCGGCCACCTACTTAACG+AGG - chr8_3:5040374-5040393 Msa1271600:CDS 60.0%
TCCAGGGGCTTGGGATTGAC+AGG - chr8_3:5041734-5041753 Msa1271600:intron 60.0%
ACCTGTCAATCCCAAGCCCC+TGG + chr8_3:5041738-5041757 None:intergenic 60.0%
GGGGCTTGGGATTGACAGGT+TGG - chr8_3:5041738-5041757 Msa1271600:intron 60.0%
! GCGCGGATAAGAAGCGTGCG+AGG + chr8_3:5033052-5033071 None:intergenic 65.0%
ATTACGGCGGTTGCGACCGG+AGG + chr8_3:5033098-5033117 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+AGG + chr8_3:5036110-5036129 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr8_3:5036110-5036129 Msa1271600:intron 65.0%
GTGCATGGTCTCCCTCCTCC+AGG + chr8_3:5040217-5040236 None:intergenic 65.0%
TTCTAGGCGTCCTCGCTGCC+AGG + chr8_3:5041476-5041495 None:intergenic 65.0%
CTCCCGCATACGCAGGGTCC+GGG + chr8_3:5036115-5036134 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + chr8_3:5036116-5036135 None:intergenic 70.0%
GCGGTTGCGACCGGAGGAGG+TGG + chr8_3:5033092-5033111 None:intergenic 75.0%
ACGGCGGTTGCGACCGGAGG+AGG + chr8_3:5033095-5033114 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 5032892 5042085 5032892 ID=Msa1271600;Name=Msa1271600
chr8_3 mRNA 5032892 5042085 5032892 ID=Msa1271600-mRNA-1;Parent=Msa1271600;Name=Msa1271600-mRNA-1;_AED=0.06;_eAED=0.06;_QI=79|1|1|1|1|1|14|254|579
chr8_3 exon 5032892 5033238 5032892 ID=Msa1271600-mRNA-1:exon:1769;Parent=Msa1271600-mRNA-1
chr8_3 exon 5033326 5033496 5033326 ID=Msa1271600-mRNA-1:exon:1768;Parent=Msa1271600-mRNA-1
chr8_3 exon 5033868 5033958 5033868 ID=Msa1271600-mRNA-1:exon:1767;Parent=Msa1271600-mRNA-1
chr8_3 exon 5034285 5034379 5034285 ID=Msa1271600-mRNA-1:exon:1766;Parent=Msa1271600-mRNA-1
chr8_3 exon 5034582 5034788 5034582 ID=Msa1271600-mRNA-1:exon:1765;Parent=Msa1271600-mRNA-1
chr8_3 exon 5034890 5034994 5034890 ID=Msa1271600-mRNA-1:exon:1764;Parent=Msa1271600-mRNA-1
chr8_3 exon 5035580 5035672 5035580 ID=Msa1271600-mRNA-1:exon:1763;Parent=Msa1271600-mRNA-1
chr8_3 exon 5036143 5036250 5036143 ID=Msa1271600-mRNA-1:exon:1762;Parent=Msa1271600-mRNA-1
chr8_3 exon 5037061 5037129 5037061 ID=Msa1271600-mRNA-1:exon:1761;Parent=Msa1271600-mRNA-1
chr8_3 exon 5038007 5038064 5038007 ID=Msa1271600-mRNA-1:exon:1760;Parent=Msa1271600-mRNA-1
chr8_3 exon 5038481 5038589 5038481 ID=Msa1271600-mRNA-1:exon:1759;Parent=Msa1271600-mRNA-1
chr8_3 exon 5040088 5040196 5040088 ID=Msa1271600-mRNA-1:exon:1758;Parent=Msa1271600-mRNA-1
chr8_3 exon 5040368 5040586 5040368 ID=Msa1271600-mRNA-1:exon:1757;Parent=Msa1271600-mRNA-1
chr8_3 exon 5041794 5042085 5041794 ID=Msa1271600-mRNA-1:exon:1756;Parent=Msa1271600-mRNA-1
chr8_3 five_prime_UTR 5042007 5042085 5042007 ID=Msa1271600-mRNA-1:five_prime_utr;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5041794 5042006 5041794 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5040368 5040586 5040368 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5040088 5040196 5040088 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5038481 5038589 5038481 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5038007 5038064 5038007 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5037061 5037129 5037061 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5036143 5036250 5036143 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5035580 5035672 5035580 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5034890 5034994 5034890 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5034582 5034788 5034582 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5034285 5034379 5034285 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5033868 5033958 5033868 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5033326 5033496 5033326 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 CDS 5033146 5033238 5033146 ID=Msa1271600-mRNA-1:cds;Parent=Msa1271600-mRNA-1
chr8_3 three_prime_UTR 5032892 5033145 5032892 ID=Msa1271600-mRNA-1:three_prime_utr;Parent=Msa1271600-mRNA-1
Gene Sequence

>Msa1271600

ATGGTGGAGGCGTTGAAACTGTTGAACCTAACATGGAACCCTTTGATGAACAATTTCATTCACGCATTTCGTCGAACACCTCGCACGCTTCTTATCCGCGCCTCTTCTTCTTATTCAACCACCTCCTCCGGTCGCAACCGCCGTAATTCTCCGTCGTCCTCCACCACTTCCACCTCCGATAGGGAGTCTATTCGAGCCATGCGCTTGAAGAAGGTTGAAGAACTTAGAAGCAAGGGGCTCGATCCCTATGCTTATGAGTGGAACAAAACGCACAGTGCAAATAAGTTACAAGATATATATAGATATTTAGGAAATGGTGAAGAAGCTAATAGTGAGAATGATCATGTATCTATTGCGGGAAGAATTGTTGCTAGGAGAGCATTTGGAAAGCTTGCCTTTTTGACACTAAGAGACGATTCAGGGACAATTCAGCTCTATTGCGAAAAGGAGAGACTTGATGATCAGTTTGAGCAGTTGAAGGCATATGTTGATATTGGTGATATACTAGGTGCAAGAGGAACAATTAAACGCACAGAAAAAGGGGAACTTTCTGTGTGTGTGCTATCTTTTGCAATCCTTACAAAATCTTTGCTTCCACTTCCTGACAAATATCACGGTCTAACTGATATAGATATACGCTATCGCCAGAGGTATGTAGATATGATTGCAAATCCAGAGGTAGCTGATGTGTTCCGCAAAAGAGCCAAGGTTGTATCAGAGATACGGAGGACAATGGATTCTTTAGGTTTCGTTGAGGTTGAAACTCCAGTTTTGCAGGGAGAAGCTGGAGGAGCCGAAGCTAGACCATTCGTGACATACCACAATTCTCTTGGAAGAGACTTATATTTGAGAATTGCGACTGAATTGCACCTAAAGAGAATGCTGGTGGGTGGGTTTGAAAAAGTATACGAGATTGGTCGAATATTTAGAAATGAAGGAATATCAACTCGTCATAATCCGGAATTTACAACTATAGAGATGTATGAAGCATACTCAGACTACCAAAGCATGATGAATTTAGCAGAGGAAATTGTCACTCAGTGTGCTCTTGCAGTTCACGGAAAGCTTACTGTTGATTATCAGGGAGTTGAGATATGTTTGGAAAGGCCCTGGAGGAGGGAGACCATGCACAATCTTGTTAAAGAAATTTCCGGGATCGATTTCAATGAATTGGGAAATGATCTCGAGGTTGCAAAACAAGCTACTCTGAGTACCCTTGGAAAGAATCTTGATAACAAGGATAAAGCTTCCATTGAAGCATGCCAATCTGCCGGCCACCTACTTAACGAGGTTTTTGAGATATATGTAGAACCAAAGCTCATCCAACCTACATTTGTTTTAGACTACCCAATTGAGATATCTCCATTGGCTAAACCACACCGCAGATCCACAGGTTTGACCGAGAGGTTTGAACTTTTCATTTGTGGTCGGGAACTAGGCAATGCATTCTCTGAATTGACTGATCCTATAGATCAGCGAGGACGCCTAGAAGATCAAATTAGACAACACAAAAAGAAAAAAGCAGCTCTTTCAACAAATGGTGGTAAAAAAGAAGGAATAGAAAATGAGGATGATTCGTATGATGTGACTCTTGACGATGATTTCCTAACGGCTTTGGAGTATGGAATGCCTCCAGCTTCTGGAATGGGGCTTGGGATTGACAGGTTGGTGATGCTTTTGACAAATTCTCCCAGCATTAGAGATGTAATAGCCTTCCCAGTACTCAAGGTCCAACAATAA
Protein sequence

>Msa1271600

MVEALKLLNLTWNPLMNNFIHAFRRTPRTLLIRASSSYSTTSSGRNRRNSPSSSTTSTSDRESIRAMRLKKVEELRSKGLDPYAYEWNKTHSANKLQDIYRYLGNGEEANSENDHVSIAGRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLDDQFEQLKAYVDIGDILGARGTIKRTEKGELSVCVLSFAILTKSLLPLPDKYHGLTDIDIRYRQRYVDMIANPEVADVFRKRAKVVSEIRRTMDSLGFVEVETPVLQGEAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNLAEEIVTQCALAVHGKLTVDYQGVEICLERPWRRETMHNLVKEISGIDFNELGNDLEVAKQATLSTLGKNLDNKDKASIEACQSAGHLLNEVFEIYVEPKLIQPTFVLDYPIEISPLAKPHRRSTGLTERFELFICGRELGNAFSELTDPIDQRGRLEDQIRQHKKKKAALSTNGGKKEGIENEDDSYDVTLDDDFLTALEYGMPPASGMGLGIDRLVMLLTNSPSIRDVIAFPVLKVQQ*