AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0804110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0804110 MtrunA17_Chr5g0412111 95.923 466 18 1 1 465 1 466 0.0 929
Msa0804110 MtrunA17_Chr5g0412101 77.253 466 103 1 3 465 10 475 0.0 749
Msa0804110 MtrunA17_Chr5g0412131 78.710 465 95 2 4 465 11 474 0.0 749
Msa0804110 MtrunA17_Chr5g0426431 38.413 479 259 11 5 460 12 477 3.83e-96 298
Msa0804110 MtrunA17_Chr3g0092641 37.759 482 260 12 4 460 11 477 1.43e-94 294
Msa0804110 MtrunA17_Chr6g0454261 34.105 475 291 8 4 460 9 479 1.71e-94 294
Msa0804110 MtrunA17_Chr6g0454141 34.316 475 290 8 4 460 9 479 7.05e-94 292
Msa0804110 MtrunA17_Chr7g0217881 36.864 472 264 9 4 460 9 461 2.20e-93 290
Msa0804110 MtrunA17_Chr6g0454191 36.192 478 278 11 4 460 9 480 1.23e-92 289
Msa0804110 MtrunA17_Chr6g0453961 34.172 477 289 10 4 460 18 489 3.74e-92 288
Msa0804110 MtrunA17_Chr6g0454121 36.287 474 277 10 4 458 9 476 6.02e-92 287
Msa0804110 MtrunA17_Chr6g0454401 34.382 477 288 9 4 460 9 480 6.57e-92 287
Msa0804110 MtrunA17_Chr6g0454331 33.682 478 291 9 4 460 6 478 4.25e-91 285
Msa0804110 MtrunA17_Chr6g0453951 35.000 480 280 12 4 460 56 526 2.61e-90 284
Msa0804110 MtrunA17_Chr8g0359821 34.091 484 277 13 4 460 9 477 7.72e-89 279
Msa0804110 MtrunA17_Chr6g0454301 35.654 474 283 11 4 460 262 730 1.56e-88 285
Msa0804110 MtrunA17_Chr6g0454301 43.421 228 123 3 235 458 2 227 4.37e-54 192
Msa0804110 MtrunA17_Chr6g0454291 34.947 475 287 8 4 460 6 476 2.33e-88 278
Msa0804110 MtrunA17_Chr6g0454181 33.543 477 291 10 4 460 9 479 4.57e-88 277
Msa0804110 MtrunA17_Chr2g0278711 35.881 471 284 9 4 460 10 476 1.58e-87 276
Msa0804110 MtrunA17_Chr6g0454131 35.685 482 269 10 4 458 9 476 2.44e-87 275
Msa0804110 MtrunA17_Chr3g0118691 34.728 478 286 11 2 460 12 482 3.57e-87 275
Msa0804110 MtrunA17_Chr5g0423981 34.490 461 273 9 4 460 9 444 3.59e-87 274
Msa0804110 MtrunA17_Chr4g0050341 34.864 479 286 11 4 461 18 491 2.28e-86 273
Msa0804110 MtrunA17_Chr6g0454201 35.565 478 280 12 4 460 10 480 3.98e-86 272
Msa0804110 MtrunA17_Chr6g0454151 35.000 480 278 12 4 460 9 477 4.31e-86 272
Msa0804110 MtrunA17_Chr6g0452771 34.034 476 290 9 4 460 9 479 5.15e-85 269
Msa0804110 MtrunA17_Chr8g0336331 33.546 471 294 9 5 460 10 476 1.46e-84 268
Msa0804110 MtrunA17_Chr6g0454361 34.461 473 286 11 4 457 10 477 4.35e-84 267
Msa0804110 MtrunA17_Chr6g0454341 33.475 472 292 11 4 458 9 475 1.54e-83 265
Msa0804110 MtrunA17_Chr3g0078841 33.475 472 292 11 4 458 9 475 1.57e-83 265
Msa0804110 MtrunA17_Chr3g0118701 33.402 482 283 11 2 458 12 480 5.55e-83 264
Msa0804110 MtrunA17_Chr6g0454351 33.403 476 276 12 4 460 11 464 5.92e-83 263
Msa0804110 MtrunA17_Chr3g0118661 34.855 482 275 13 2 458 10 477 6.62e-83 264
Msa0804110 MtrunA17_Chr3g0118771 32.919 483 284 11 2 458 18 486 7.02e-83 264
Msa0804110 MtrunA17_Chr6g0454211 34.244 476 289 9 4 460 296 766 1.27e-82 270
Msa0804110 MtrunA17_Chr6g0454211 33.077 260 138 4 125 379 8 236 9.86e-41 155
Msa0804110 MtrunA17_Chr3g0118671 33.966 474 283 12 5 457 6 470 7.38e-82 261
Msa0804110 MtrunA17_Chr6g0454321 33.626 455 282 10 5 443 10 460 3.71e-81 264
Msa0804110 MtrunA17_Chr3g0118711 32.645 484 288 12 2 460 10 480 1.29e-78 253
Msa0804110 MtrunA17_Chr5g0426401 43.607 305 163 7 166 464 13 314 1.84e-75 239
Msa0804110 MtrunA17_Chr4g0032331 34.100 478 263 16 6 464 9 453 7.57e-75 242
Msa0804110 MtrunA17_Chr3g0112771 32.347 473 274 13 6 463 13 454 1.07e-74 242
Msa0804110 MtrunA17_Chr3g0112761 33.473 478 266 14 5 463 8 452 7.07e-73 237
Msa0804110 MtrunA17_Chr6g0454271 39.789 284 167 3 180 460 4 286 2.29e-71 228
Msa0804110 MtrunA17_Chr3g0118751 31.405 484 261 13 2 458 3 442 3.09e-70 229
Msa0804110 MtrunA17_Chr6g0454251 33.671 395 239 8 4 380 6 395 2.61e-66 218
Msa0804110 MtrunA17_Chr8g0380531 33.404 470 279 15 5 461 10 458 3.75e-63 211
Msa0804110 MtrunA17_Chr7g0218811 31.224 474 275 12 1 459 11 448 1.40e-62 209
Msa0804110 MtrunA17_Chr7g0218821 31.893 486 271 13 1 461 1 451 2.21e-62 209
Msa0804110 MtrunA17_Chr7g0218831 30.835 467 279 11 4 459 5 438 1.30e-60 204
Msa0804110 MtrunA17_Chr7g0249981 30.233 473 285 15 5 463 25 466 5.86e-60 204
Msa0804110 MtrunA17_Chr6g0464871 33.121 471 267 17 5 457 23 463 1.33e-59 202
Msa0804110 MtrunA17_Chr6g0454221 44.298 228 122 4 235 458 2 228 1.84e-59 197
Msa0804110 MtrunA17_Chr7g0250001 30.208 480 276 16 5 463 6 447 7.49e-59 200
Msa0804110 MtrunA17_Chr6g0464921 30.962 478 284 16 3 464 9 456 1.10e-57 197
Msa0804110 MtrunA17_Chr3g0118721 35.764 288 176 5 180 460 4 289 1.16e-57 192
Msa0804110 MtrunA17_Chr5g0414321 31.290 473 276 15 5 460 11 451 5.11e-57 195
Msa0804110 MtrunA17_Chr7g0218841 30.022 463 289 10 4 459 5 439 1.69e-56 193
Msa0804110 MtrunA17_Chr5g0414331 29.810 473 283 15 5 460 13 453 1.08e-55 192
Msa0804110 MtrunA17_Chr6g0454171 37.828 267 142 5 199 458 58 307 1.20e-55 187
Msa0804110 MtrunA17_Chr6g0464881 31.568 472 279 17 2 457 8 451 1.98e-55 191
Msa0804110 MtrunA17_Chr1g0207981 29.895 475 299 12 5 460 13 472 2.70e-54 188
Msa0804110 MtrunA17_Chr3g0121991 30.864 486 295 13 5 464 79 549 3.00e-54 190
Msa0804110 MtrunA17_Chr8g0366391 30.021 483 305 16 5 464 9 481 7.00e-54 187
Msa0804110 MtrunA17_Chr6g0464841 30.498 482 265 17 5 457 11 451 1.03e-53 186
Msa0804110 MtrunA17_Chr7g0249931 29.375 480 282 15 5 463 40 483 6.11e-53 185
Msa0804110 MtrunA17_Chr8g0377921 28.392 479 298 14 4 457 2 460 9.12e-51 179
Msa0804110 MtrunA17_Chr6g0464861 29.289 478 279 19 3 457 9 450 1.34e-50 178
Msa0804110 MtrunA17_Chr8g0355011 30.471 361 198 8 108 460 46 361 1.20e-49 173
Msa0804110 MtrunA17_Chr7g0265151 30.539 501 277 17 5 460 9 483 1.45e-49 176
Msa0804110 MtrunA17_Chr7g0265041 28.657 499 300 14 1 460 7 488 3.31e-49 175
Msa0804110 MtrunA17_Chr1g0207861 29.630 486 291 18 5 462 8 470 3.58e-49 175
Msa0804110 MtrunA17_Chr3g0122001 31.405 484 287 13 5 460 486 952 9.89e-48 176
Msa0804110 MtrunA17_Chr3g0122001 30.247 486 299 11 5 464 6 477 3.37e-47 174
Msa0804110 MtrunA17_Chr1g0161351 28.776 490 292 18 5 463 37 500 1.31e-47 171
Msa0804110 MtrunA17_Chr8g0347281 29.787 470 268 16 4 444 17 453 1.32e-47 171
Msa0804110 MtrunA17_Chr1g0207971 28.452 478 290 15 5 461 8 454 1.90e-47 169
Msa0804110 MtrunA17_Chr4g0053321 29.149 470 295 15 6 457 27 476 1.93e-47 171
Msa0804110 MtrunA17_Chr5g0401721 26.923 494 292 15 2 457 5 467 5.30e-47 169
Msa0804110 MtrunA17_Chr7g0275681 29.026 503 282 18 2 460 9 480 5.53e-47 169
Msa0804110 MtrunA17_Chr8g0377941 30.444 496 262 18 6 460 8 461 1.82e-46 167
Msa0804110 MtrunA17_Chr6g0454371 45.029 171 90 3 293 460 1 170 2.33e-46 158
Msa0804110 MtrunA17_Chr4g0053501 28.750 480 286 18 5 457 11 461 3.09e-46 167
Msa0804110 MtrunA17_Chr4g0044511 28.425 489 297 20 5 462 40 506 3.19e-46 167
Msa0804110 MtrunA17_Chr7g0218791 27.872 470 296 12 1 455 1 442 1.05e-45 164
Msa0804110 MtrunA17_Chr8g0365811 28.454 485 298 18 6 462 496 959 1.29e-45 170
Msa0804110 MtrunA17_Chr8g0365811 27.706 462 285 17 2 433 5 447 1.26e-42 161
Msa0804110 MtrunA17_Chr8g0382021 31.056 483 268 19 10 460 39 488 1.29e-45 165
Msa0804110 MtrunA17_Chr6g0462531 27.708 480 298 14 6 458 5 462 1.69e-45 164
Msa0804110 MtrunA17_Chr7g0275511 29.675 492 273 20 4 456 14 471 1.91e-45 165
Msa0804110 MtrunA17_Chr3g0098111 27.984 486 306 15 2 462 5 471 2.62e-45 164
Msa0804110 MtrunA17_Chr3g0079731 27.984 511 291 14 2 464 3 484 5.84e-45 163
Msa0804110 MtrunA17_Chr5g0431441 27.719 469 305 14 5 460 18 465 9.50e-45 162
Msa0804110 MtrunA17_Chr1g0207951 28.750 480 298 16 2 460 652 1108 1.88e-44 167
Msa0804110 MtrunA17_Chr1g0207951 28.337 487 287 17 2 461 120 571 1.29e-42 161
Msa0804110 MtrunA17_Chr4g0044501 32.208 385 226 14 99 463 109 478 3.07e-44 161
Msa0804110 MtrunA17_Chr1g0179901 28.370 497 296 20 5 460 16 493 5.23e-44 161
Msa0804110 MtrunA17_Chr8g0373301 33.422 377 197 17 108 456 112 462 6.65e-44 160
Msa0804110 MtrunA17_Chr8g0347271 28.481 474 269 17 4 444 18 454 1.08e-43 160
Msa0804110 MtrunA17_Chr7g0249961 36.709 237 140 5 235 465 32 264 1.46e-43 154
Msa0804110 MtrunA17_Chr6g0462571 26.722 479 297 16 6 456 5 457 2.89e-43 159
Msa0804110 MtrunA17_Chr8g0335141 27.859 481 307 15 4 462 8 470 4.77e-43 158
Msa0804110 MtrunA17_Chr8g0336691 27.856 499 291 19 2 463 10 476 1.79e-42 161
Msa0804110 MtrunA17_Chr8g0336691 29.116 498 288 17 1 463 915 1382 2.07e-41 158
Msa0804110 MtrunA17_Chr8g0336691 26.931 479 295 18 1 463 476 915 2.39e-35 140
Msa0804110 MtrunA17_Chr7g0243631 26.411 496 309 16 5 463 13 489 2.14e-42 157
Msa0804110 MtrunA17_Chr7g0243931 28.252 492 305 17 5 463 17 493 3.14e-42 156
Msa0804110 MtrunA17_Chr5g0419761 27.586 493 304 16 5 460 9 485 8.06e-42 155
Msa0804110 MtrunA17_Chr7g0243681 27.181 493 304 17 5 463 11 482 1.92e-41 154
Msa0804110 MtrunA17_Chr8g0336261 47.794 136 70 1 293 427 1 136 3.12e-41 144
Msa0804110 MtrunA17_Chr5g0429711 29.707 478 284 18 7 460 12 461 3.13e-41 153
Msa0804110 MtrunA17_Chr5g0419771 28.629 496 305 16 5 465 36 517 7.44e-41 153
Msa0804110 MtrunA17_Chr6g0462521 26.316 475 297 12 6 458 5 448 9.88e-41 151
Msa0804110 MtrunA17_Chr8g0361371 28.834 489 282 20 6 457 8 467 9.90e-41 152
Msa0804110 MtrunA17_Chr4g0011051 28.000 500 301 17 5 463 9 490 1.44e-40 152
Msa0804110 MtrunA17_Chr1g0207831 25.996 477 311 12 6 461 9 464 1.93e-40 151
Msa0804110 MtrunA17_Chr6g0454231 33.463 257 128 5 211 463 4 221 2.75e-40 150
Msa0804110 MtrunA17_Chr6g0454231 26.923 234 152 8 4 223 249 477 3.84e-13 71.2
Msa0804110 MtrunA17_Chr3g0106231 28.151 476 280 15 5 460 18 451 3.75e-40 150
Msa0804110 MtrunA17_Chr7g0243951 27.755 490 309 17 5 463 11 486 6.66e-40 150
Msa0804110 MtrunA17_Chr8g0336651 27.545 501 294 18 1 463 777 1246 7.46e-40 153
Msa0804110 MtrunA17_Chr8g0336651 28.484 488 286 19 2 456 3 460 8.34e-36 141
Msa0804110 MtrunA17_Chr8g0336651 32.509 283 151 9 189 463 527 777 1.17e-34 138
Msa0804110 MtrunA17_Chr6g0462551 26.915 483 294 16 6 456 5 460 8.36e-40 149
Msa0804110 MtrunA17_Chr7g0243771 27.655 499 295 16 5 463 6 478 8.57e-40 149
Msa0804110 MtrunA17_Chr7g0265141 26.923 494 302 13 5 458 9 483 1.03e-39 149
Msa0804110 MtrunA17_Chr8g0335161 30.959 365 213 12 115 456 114 462 1.05e-39 149
Msa0804110 MtrunA17_Chr6g0486251 29.461 482 281 18 6 456 7 460 1.14e-39 149
Msa0804110 MtrunA17_Chr6g0486201 29.461 482 281 18 6 456 7 460 1.14e-39 149
Msa0804110 MtrunA17_Chr7g0265111 29.779 497 292 18 5 462 39 517 1.91e-39 149
Msa0804110 MtrunA17_Chr6g0463891 28.367 490 304 16 6 463 13 487 2.07e-39 148
Msa0804110 MtrunA17_Chr7g0265101 27.347 490 310 17 5 460 9 486 2.31e-39 148
Msa0804110 MtrunA17_Chr4g0060511 27.237 503 299 18 5 463 11 490 3.86e-39 148
Msa0804110 MtrunA17_Chr1g0159551 34.586 266 148 5 213 460 202 459 4.18e-39 147
Msa0804110 MtrunA17_Chr5g0448551 26.950 423 290 8 1 420 3 409 8.33e-39 146
Msa0804110 MtrunA17_Chr6g0459311 28.099 484 285 19 6 456 14 467 8.46e-39 146
Msa0804110 MtrunA17_Chr1g0173121 35.714 266 144 6 213 460 206 462 1.01e-38 146
Msa0804110 MtrunA17_Chr8g0334831 29.518 498 276 21 6 457 7 475 1.14e-38 146
Msa0804110 MtrunA17_Chr5g0442581 25.838 507 298 18 1 460 1 476 1.41e-38 147
Msa0804110 MtrunA17_Chr7g0232401 30.704 355 206 12 117 449 120 456 1.53e-38 145
Msa0804110 MtrunA17_Chr4g0014061 33.569 283 160 7 205 463 197 475 1.83e-38 145
Msa0804110 MtrunA17_Chr1g0207931 34.483 261 151 7 215 461 244 498 1.95e-38 146
Msa0804110 MtrunA17_Chr8g0339601 33.840 263 138 9 212 448 66 318 2.27e-38 142
Msa0804110 MtrunA17_Chr1g0153451 27.163 497 294 19 2 463 3 466 2.35e-38 145
Msa0804110 MtrunA17_Chr5g0393591 26.483 472 286 14 5 464 17 439 3.36e-38 144
Msa0804110 MtrunA17_Chr6g0462541 25.309 486 297 16 6 456 5 459 4.70e-38 144
Msa0804110 MtrunA17_Chr7g0243801 33.700 273 152 7 214 463 213 479 5.44e-38 144
Msa0804110 MtrunA17_Chr5g0401851 27.912 498 295 19 7 463 12 486 5.47e-38 144
Msa0804110 MtrunA17_Chr8g0339461 31.351 370 207 15 108 449 110 460 5.66e-38 144
Msa0804110 MtrunA17_Chr8g0334861 31.852 270 147 5 213 457 203 460 6.38e-38 144
Msa0804110 MtrunA17_Chr7g0243871 32.500 280 154 6 207 463 208 475 7.94e-38 144
Msa0804110 MtrunA17_Chr4g0042891 35.581 267 137 9 213 458 211 463 9.33e-38 143
Msa0804110 MtrunA17_Chr8g0334851 30.846 402 213 13 98 464 102 473 9.99e-38 143
Msa0804110 MtrunA17_Chr5g0431361 27.122 483 288 16 5 462 12 455 1.38e-37 142
Msa0804110 MtrunA17_Chr5g0442491 25.794 504 300 17 1 460 1 474 1.61e-37 143
Msa0804110 MtrunA17_Chr8g0336741 28.719 484 284 20 5 456 13 467 1.81e-37 142
Msa0804110 MtrunA17_Chr6g0453941 30.530 321 155 7 2 321 8 261 2.03e-37 138
Msa0804110 MtrunA17_Chr7g0232411 26.543 486 299 15 2 456 3 461 2.54e-37 142
Msa0804110 MtrunA17_Chr7g0232341 26.653 499 293 18 5 464 6 470 2.58e-37 142
Msa0804110 MtrunA17_Chr7g0243861 26.585 489 317 15 5 463 14 490 2.73e-37 142
Msa0804110 MtrunA17_Chr7g0232331 27.291 502 292 18 2 464 3 470 4.60e-37 141
Msa0804110 MtrunA17_Chr6g0449931 25.536 513 291 19 1 464 1 471 5.12e-37 141
Msa0804110 MtrunA17_Chr7g0243781 25.249 503 299 17 5 463 9 478 6.73e-37 141
Msa0804110 MtrunA17_Chr7g0265051 28.367 490 303 20 5 460 9 484 6.83e-37 141
Msa0804110 MtrunA17_Chr8g0339451 29.082 392 224 15 97 453 84 456 9.53e-37 140
Msa0804110 MtrunA17_Chr5g0442541 26.052 499 296 18 1 460 1 465 1.62e-36 140
Msa0804110 MtrunA17_Chr5g0448521 25.956 497 301 17 1 460 1 467 1.98e-36 140
Msa0804110 MtrunA17_Chr8g0339441 38.835 206 104 6 270 453 217 422 2.02e-36 139
Msa0804110 MtrunA17_Chr5g0440421 28.269 520 281 24 4 463 9 496 3.16e-36 139
Msa0804110 MtrunA17_Chr4g0044481 28.641 412 243 12 3 402 25 397 3.65e-36 138
Msa0804110 MtrunA17_Chr5g0442601 25.692 506 300 20 1 460 400 875 3.75e-36 142
Msa0804110 MtrunA17_Chr5g0442601 28.125 320 158 12 108 400 62 336 2.42e-25 109
Msa0804110 MtrunA17_Chr8g0339631 29.428 367 215 14 108 449 110 457 3.94e-36 139
Msa0804110 MtrunA17_Chr4g0042931 34.686 271 142 10 211 458 203 461 4.13e-36 139
Msa0804110 MtrunA17_Chr6g0463851 27.308 520 277 22 1 461 6 483 5.34e-36 139
Msa0804110 MtrunA17_Chr8g0336731 29.167 384 227 13 98 457 125 487 5.82e-36 139
Msa0804110 MtrunA17_Chr4g0044521 30.000 280 170 8 200 458 190 464 6.13e-36 138
Msa0804110 MtrunA17_Chr4g0066151 31.834 289 168 8 200 461 194 480 7.67e-36 138
Msa0804110 MtrunA17_Chr4g0066281 27.959 490 276 18 10 461 17 467 9.71e-36 138
Msa0804110 MtrunA17_Chr4g0066261 26.978 493 297 16 10 463 16 484 1.06e-35 138
Msa0804110 MtrunA17_Chr5g0431401 26.160 474 301 13 5 462 10 450 1.34e-35 137
Msa0804110 MtrunA17_Chr7g0235051 27.178 482 280 15 5 457 11 450 1.53e-35 137
Msa0804110 MtrunA17_Chr5g0442561 24.750 501 307 17 1 460 1 472 3.14e-35 136
Msa0804110 MtrunA17_Chr7g0232311 30.556 360 203 14 123 457 123 460 3.15e-35 136
Msa0804110 MtrunA17_Chr4g0066221 26.869 495 294 19 10 463 16 483 4.24e-35 136
Msa0804110 MtrunA17_Chr2g0307961 26.987 478 307 15 4 460 12 468 4.84e-35 136
Msa0804110 MtrunA17_Chr5g0420801 26.789 489 296 17 5 464 7 462 4.93e-35 135
Msa0804110 MtrunA17_Chr7g0232391 30.566 265 154 7 213 456 206 461 5.87e-35 135
Msa0804110 MtrunA17_Chr4g0072771 25.847 472 315 16 1 462 21 467 7.40e-35 135
Msa0804110 MtrunA17_Chr5g0431371 26.819 481 289 16 5 462 10 450 7.46e-35 135
Msa0804110 MtrunA17_Chr7g0243711 32.800 250 148 5 233 463 71 319 1.03e-34 132
Msa0804110 MtrunA17_Chr4g0066201 26.733 505 288 21 1 463 13 477 1.21e-34 135
Msa0804110 MtrunA17_Chr5g0428081 26.295 502 306 15 1 463 6 482 1.55e-34 135
Msa0804110 MtrunA17_Chr4g0072761 28.142 366 229 10 105 462 115 454 3.93e-34 133
Msa0804110 MtrunA17_Chr7g0243851 25.866 491 276 15 5 463 11 445 5.12e-34 132
Msa0804110 MtrunA17_Chr5g0429681 28.690 481 296 19 1 457 39 496 5.71e-34 133
Msa0804110 MtrunA17_Chr5g0431421 27.122 483 285 16 5 462 10 450 7.27e-34 132
Msa0804110 MtrunA17_Chr6g0453981 35.714 224 133 5 125 340 8 228 9.47e-34 127
Msa0804110 MtrunA17_Chr2g0294921 26.069 491 304 16 10 463 165 633 1.41e-33 134
Msa0804110 MtrunA17_Chr5g0442521 24.400 500 313 16 1 460 1 475 2.04e-33 131
Msa0804110 MtrunA17_Chr6g0463861 30.986 284 161 9 205 458 193 471 6.17e-33 130
Msa0804110 MtrunA17_Chr2g0329111 27.316 421 259 14 2 396 3 402 1.03e-32 129
Msa0804110 MtrunA17_Chr8g0369341 25.309 486 317 13 5 464 7 472 1.73e-32 129
Msa0804110 MtrunA17_Chr2g0294931 26.104 498 299 18 6 461 12 482 2.30e-32 129
Msa0804110 MtrunA17_Chr8g0355221 29.197 274 172 6 211 463 217 489 2.70e-32 129
Msa0804110 MtrunA17_Chr4g0066171 26.786 504 288 19 1 463 16 479 3.04e-32 128
Msa0804110 MtrunA17_Chr5g0432731 30.627 271 160 7 204 457 34 293 3.45e-32 124
Msa0804110 MtrunA17_Chr7g0218311 27.236 492 294 21 10 463 21 486 6.05e-32 127
Msa0804110 MtrunA17_Chr4g0066131 29.693 293 176 8 199 463 187 477 7.63e-32 127
Msa0804110 MtrunA17_Chr5g0416741 26.873 387 255 10 96 463 109 486 1.14e-31 127
Msa0804110 MtrunA17_Chr2g0302991 30.195 308 182 9 173 458 164 460 1.54e-31 126
Msa0804110 MtrunA17_Chr5g0403641 30.903 288 150 10 201 453 222 495 1.57e-31 126
Msa0804110 MtrunA17_Chr1g0165701 31.148 244 151 4 237 463 243 486 1.65e-31 126
Msa0804110 MtrunA17_Chr2g0302961 25.707 389 240 11 96 458 98 463 2.29e-31 125
Msa0804110 MtrunA17_Chr7g0243761 36.816 201 101 5 271 463 275 457 2.90e-31 125
Msa0804110 MtrunA17_Chr5g0442511 25.253 495 291 16 1 461 45 494 5.11e-31 125
Msa0804110 MtrunA17_Chr8g0374901 31.010 287 155 11 211 463 204 481 6.40e-31 124
Msa0804110 MtrunA17_Chr8g0374941 31.022 274 160 8 211 457 1143 1414 1.72e-30 125
Msa0804110 MtrunA17_Chr8g0374941 29.924 264 148 11 211 443 205 462 2.11e-25 110
Msa0804110 MtrunA17_Chr8g0374941 30.651 261 148 9 211 442 670 926 2.49e-25 110
Msa0804110 MtrunA17_Chr1g0153461 33.010 206 119 4 270 456 3 208 4.76e-30 116
Msa0804110 MtrunA17_Chr7g0243611 29.720 286 173 8 123 402 8 271 6.45e-30 118
Msa0804110 MtrunA17_Chr8g0374971 29.577 284 165 8 210 463 205 483 7.86e-30 121
Msa0804110 MtrunA17_Chr2g0294941 28.793 323 193 12 110 414 17 320 1.37e-29 119
Msa0804110 MtrunA17_Chr8g0374931 28.912 294 178 8 198 463 194 484 2.07e-29 120
Msa0804110 MtrunA17_Chr5g0410941 25.502 498 298 17 6 461 24 490 5.86e-29 119
Msa0804110 MtrunA17_Chr8g0350881 30.556 288 165 10 204 461 199 481 7.27e-29 119
Msa0804110 MtrunA17_Chr8g0370941 28.859 298 150 11 211 460 205 488 1.18e-28 118
Msa0804110 MtrunA17_Chr3g0106251 30.137 292 175 8 180 460 20 293 1.28e-28 115
Msa0804110 MtrunA17_Chr7g0241801 25.618 445 274 14 5 438 9 407 3.27e-28 116
Msa0804110 MtrunA17_Chr7g0241781 26.096 456 262 19 5 440 9 409 3.63e-28 115
Msa0804110 MtrunA17_Chr5g0431431 31.474 251 138 7 156 397 99 324 5.72e-28 114
Msa0804110 MtrunA17_Chr7g0243911 37.209 172 102 3 264 431 15 184 7.66e-28 110
Msa0804110 MtrunA17_Chr6g0482061 29.630 270 162 8 198 448 207 467 2.50e-27 114
Msa0804110 MtrunA17_Chr5g0416821 26.705 352 237 10 122 463 136 476 2.96e-27 114
Msa0804110 MtrunA17_Chr8g0357361 35.407 209 117 6 206 406 55 253 3.30e-27 110
Msa0804110 MtrunA17_Chr7g0243811 33.846 195 116 5 211 400 187 373 1.78e-26 110
Msa0804110 MtrunA17_Chr5g0409591 30.488 246 142 9 214 432 212 455 2.58e-25 108
Msa0804110 MtrunA17_Chr8g0361411 24.431 483 307 16 5 463 8 456 2.89e-25 107
Msa0804110 MtrunA17_Chr7g0232351 35.870 184 90 6 213 379 206 378 8.86e-25 105
Msa0804110 MtrunA17_Chr6g0454111 36.567 134 85 0 180 313 50 183 2.56e-24 99.8
Msa0804110 MtrunA17_Chr6g0464091 27.027 407 260 14 5 396 18 402 3.46e-23 102
Msa0804110 MtrunA17_Chr5g0427571 42.063 126 68 4 273 394 105 229 3.76e-23 99.4
Msa0804110 MtrunA17_Chr8g0336321 42.424 132 70 5 268 394 265 395 4.39e-23 101
Msa0804110 MtrunA17_Chr7g0231631 29.961 257 170 5 214 463 9 262 4.59e-23 98.6
Msa0804110 MtrunA17_Chr3g0079711 34.946 186 95 6 297 458 3 186 6.24e-23 95.9
Msa0804110 MtrunA17_Chr8g0337381 38.281 128 74 2 340 463 2 128 7.40e-23 94.0
Msa0804110 MtrunA17_Chr8g0367221 25.728 412 261 14 5 396 12 398 1.49e-22 101
Msa0804110 MtrunA17_Chr8g0367221 34.091 176 105 6 273 438 1058 1232 2.47e-20 94.7
Msa0804110 MtrunA17_Chr8g0367221 36.719 128 77 2 273 396 1548 1675 5.53e-20 93.6
Msa0804110 MtrunA17_Chr8g0336251 38.931 131 76 3 268 394 265 395 1.97e-22 99.8
Msa0804110 MtrunA17_Chr4g0066141 35.849 159 85 4 322 463 196 354 4.13e-22 97.4
Msa0804110 MtrunA17_Chr2g0278721 23.778 450 312 14 5 436 517 953 4.44e-22 99.8
Msa0804110 MtrunA17_Chr2g0278721 24.882 422 248 16 5 396 15 397 8.60e-20 92.8
Msa0804110 MtrunA17_Chr1g0196851 24.700 417 266 16 5 404 49 434 9.51e-22 97.8
Msa0804110 MtrunA17_Chr4g0069611 24.694 409 260 13 5 396 15 392 2.44e-21 96.3
Msa0804110 MtrunA17_Chr2g0278741 25.610 410 260 15 5 396 97 479 2.84e-21 96.7
Msa0804110 MtrunA17_Chr3g0092031 37.302 126 77 2 272 396 5 129 1.43e-20 89.7
Msa0804110 MtrunA17_Chr6g0466831 24.672 458 292 18 5 440 18 444 1.62e-20 94.0
Msa0804110 MtrunA17_Chr7g0250021 26.744 344 212 13 5 336 12 327 3.10e-20 91.7
Msa0804110 MtrunA17_Chr1g0207881 33.333 153 95 1 316 461 233 385 5.57e-20 91.7
Msa0804110 MtrunA17_Chr4g0040691 24.582 419 268 15 5 405 8 396 1.14e-19 91.3
Msa0804110 MtrunA17_Chr4g0039881 24.694 409 240 15 15 396 2 369 2.22e-18 87.4
Msa0804110 MtrunA17_Chr6g0466841 24.510 408 262 14 5 396 18 395 3.14e-18 87.0
Msa0804110 MtrunA17_Chr4g0029131 24.279 416 266 14 5 404 12 394 8.47e-18 86.3
Msa0804110 MtrunA17_Chr2g0302851 24.941 421 244 16 5 396 16 393 1.60e-17 84.7
Msa0804110 MtrunA17_Chr4g0040711 22.819 447 296 14 5 431 8 425 8.47e-17 82.4
Msa0804110 MtrunA17_Chr8g0334841 36.090 133 69 4 212 339 37 158 2.72e-16 76.6
Msa0804110 MtrunA17_Chr5g0426411 33.133 166 101 4 4 162 11 173 2.82e-16 76.6
Msa0804110 MtrunA17_Chr2g0283041 21.267 442 299 12 5 426 7 419 3.87e-15 77.4
Msa0804110 MtrunA17_Chr4g0029151 23.188 414 275 14 5 405 20 403 8.38e-15 76.3
Msa0804110 MtrunA17_Chr8g0336271 24.031 258 173 7 5 243 10 263 4.42e-14 72.4
Msa0804110 MtrunA17_Chr5g0442501 24.179 335 204 9 1 317 1 303 4.74e-14 72.8
Msa0804110 MtrunA17_Chr6g0454391 42.857 63 36 0 356 418 13 75 7.22e-13 65.5
Msa0804110 MtrunA17_Chr7g0243731 43.056 72 41 0 333 404 2 73 7.83e-13 63.9
Msa0804110 MtrunA17_Chr3g0118741 55.769 52 22 1 2 52 3 54 3.59e-12 62.0
Msa0804110 MtrunA17_Chr5g0427561 32.955 88 50 3 378 460 1 84 1.08e-11 60.8
Msa0804110 MtrunA17_Chr6g0454281 26.866 201 126 8 4 186 9 206 2.59e-11 63.2
Msa0804110 MtrunA17_Chr2g0319801 21.412 425 284 16 1 405 1 395 5.89e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0804110 AT1G22380.1 35.537 484 274 11 2 460 10 480 7.52e-95 295
Msa0804110 AT1G22400.1 32.017 481 290 10 2 457 10 478 2.64e-88 278
Msa0804110 AT1G22360.1 33.333 486 276 11 5 460 10 477 1.13e-87 276
Msa0804110 AT1G22340.1 34.029 479 289 11 2 460 10 481 9.29e-86 271
Msa0804110 AT1G22360.2 33.333 483 268 12 5 460 10 465 2.51e-85 270
Msa0804110 AT1G78270.1 34.034 476 292 11 2 460 10 480 5.37e-85 270
Msa0804110 AT1G22370.2 33.333 480 285 10 2 460 10 475 1.18e-84 268
Msa0804110 AT3G11340.1 33.684 475 275 13 1 463 1 447 1.93e-75 243
Msa0804110 AT5G05880.1 32.696 471 276 11 5 462 8 450 1.51e-69 228
Msa0804110 AT5G05900.1 33.053 475 264 15 5 460 8 447 1.37e-68 226
Msa0804110 AT5G05890.1 32.365 482 267 15 5 462 8 454 2.99e-68 225
Msa0804110 AT3G55710.1 31.368 475 285 15 5 463 8 457 7.38e-67 221
Msa0804110 AT3G46670.1 32.558 473 275 14 5 463 9 451 2.64e-66 220
Msa0804110 AT3G46660.1 33.403 479 263 15 6 463 15 458 3.64e-66 219
Msa0804110 AT3G46680.1 31.501 473 275 13 2 457 6 446 1.68e-65 218
Msa0804110 AT5G05860.1 32.627 472 269 14 5 460 9 447 3.08e-64 214
Msa0804110 AT3G55700.1 30.316 475 286 12 5 463 8 453 3.11e-64 214
Msa0804110 AT3G46700.1 32.143 476 275 13 1 462 5 446 1.89e-63 212
Msa0804110 AT5G05870.1 30.769 468 291 11 5 460 8 454 3.13e-62 209
Msa0804110 AT3G46720.1 31.799 478 268 17 2 462 6 442 2.14e-61 207
Msa0804110 AT3G02100.1 31.368 475 291 10 1 462 9 461 1.83e-60 205
Msa0804110 AT3G46690.1 32.298 483 270 17 1 462 5 451 2.46e-60 204
Msa0804110 AT5G38010.1 32.059 471 278 14 5 460 10 453 8.33e-60 202
Msa0804110 AT5G59580.1 30.932 472 279 16 5 461 9 448 9.25e-60 202
Msa0804110 AT2G26480.1 29.828 466 289 15 5 460 8 445 1.90e-59 202
Msa0804110 AT3G46650.1 30.444 473 268 13 5 463 10 435 3.08e-59 201
Msa0804110 AT2G43820.1 30.561 481 272 16 5 462 7 448 6.66e-59 200
Msa0804110 AT1G22370.1 35.762 302 184 6 166 460 7 305 2.89e-58 194
Msa0804110 AT5G38040.1 31.670 461 269 15 13 458 18 447 3.95e-58 198
Msa0804110 AT5G59590.1 30.335 478 267 16 5 457 10 446 1.23e-57 197
Msa0804110 AT2G43840.1 29.325 474 285 15 5 461 7 447 5.25e-57 195
Msa0804110 AT2G43840.2 29.299 471 289 14 5 461 7 447 5.77e-57 195
Msa0804110 AT4G15480.1 28.481 474 307 10 5 460 19 478 4.60e-56 194
Msa0804110 AT2G23260.1 31.557 469 283 19 5 460 10 453 2.45e-53 186
Msa0804110 AT3G21560.1 28.926 484 291 18 4 458 11 470 3.55e-53 186
Msa0804110 AT2G36970.1 28.807 486 297 16 4 462 9 472 6.25e-52 182
Msa0804110 AT2G31750.1 28.692 474 293 16 5 460 8 454 4.08e-51 180
Msa0804110 AT2G31750.2 28.421 475 300 16 5 463 8 458 5.52e-51 180
Msa0804110 AT5G17050.1 31.680 363 229 9 104 463 113 459 8.25e-51 179
Msa0804110 AT2G31790.1 27.778 468 301 14 5 457 8 453 1.00e-50 179
Msa0804110 AT5G17040.1 27.859 481 290 16 1 463 1 442 1.08e-50 178
Msa0804110 AT4G15490.1 27.917 480 295 17 5 457 8 463 2.49e-50 178
Msa0804110 AT2G28080.1 28.636 440 270 13 10 427 23 440 4.29e-50 177
Msa0804110 AT4G15500.1 27.848 474 300 11 4 457 8 459 5.88e-50 177
Msa0804110 AT4G15550.1 27.510 498 278 17 4 457 12 470 1.12e-48 174
Msa0804110 AT2G23250.1 31.087 460 273 18 14 460 7 435 1.84e-48 172
Msa0804110 AT1G05675.1 29.764 467 297 9 2 457 3 449 2.52e-48 172
Msa0804110 AT1G05680.1 29.289 478 285 15 2 457 3 449 2.89e-48 172
Msa0804110 AT5G17040.2 31.803 305 191 7 163 463 49 340 4.39e-48 169
Msa0804110 AT5G26310.1 30.550 491 264 20 4 453 6 460 2.36e-47 170
Msa0804110 AT1G01420.1 31.224 474 260 19 3 443 6 446 2.62e-46 167
Msa0804110 AT1G01420.2 31.224 474 260 19 3 443 9 449 2.85e-46 167
Msa0804110 AT1G05560.1 28.974 497 270 21 1 460 1 451 7.78e-46 166
Msa0804110 AT2G36770.1 28.138 494 306 17 5 462 14 494 8.90e-46 166
Msa0804110 AT5G17030.1 29.526 359 239 7 104 460 109 455 9.92e-46 165
Msa0804110 AT2G36780.1 27.699 491 312 15 5 464 14 492 1.76e-45 166
Msa0804110 AT1G05560.2 28.974 497 270 21 1 460 51 501 1.79e-45 166
Msa0804110 AT1G30530.1 30.769 364 229 10 101 460 106 450 2.76e-45 164
Msa0804110 AT2G36760.1 29.839 496 299 19 5 464 14 496 4.27e-45 164
Msa0804110 AT4G01070.1 28.834 489 278 16 2 453 5 460 9.62e-45 163
Msa0804110 AT1G05530.1 28.313 498 275 20 1 460 1 454 9.68e-45 162
Msa0804110 AT2G15480.1 26.789 489 309 13 2 458 7 478 1.10e-44 163
Msa0804110 AT5G66690.1 29.814 483 268 18 4 449 6 454 2.04e-44 162
Msa0804110 AT3G16520.3 27.368 475 300 15 6 458 6 457 1.82e-43 159
Msa0804110 AT1G24100.1 31.120 482 272 19 5 460 11 458 2.51e-43 159
Msa0804110 AT3G53160.1 27.038 503 292 17 5 460 8 482 3.46e-43 159
Msa0804110 AT4G34138.1 27.515 487 299 15 5 458 11 476 3.90e-43 159
Msa0804110 AT2G15480.2 26.052 499 310 13 2 458 7 488 5.43e-43 159
Msa0804110 AT2G15490.3 27.439 492 302 16 2 458 4 475 7.42e-43 158
Msa0804110 AT2G15490.1 27.273 495 302 16 2 458 4 478 2.30e-42 157
Msa0804110 AT3G16520.1 26.709 468 295 16 6 447 6 451 7.06e-42 155
Msa0804110 AT3G16520.2 27.352 457 285 15 6 436 6 441 8.49e-42 154
Msa0804110 AT2G36800.1 27.236 492 314 16 5 464 12 491 1.18e-41 155
Msa0804110 AT1G01390.1 29.314 423 240 14 3 396 6 398 6.11e-41 153
Msa0804110 AT1G01390.2 29.314 423 240 14 3 396 23 415 8.04e-41 152
Msa0804110 AT4G34131.1 26.243 503 295 18 5 462 10 481 9.38e-41 152
Msa0804110 AT2G36750.1 28.063 506 288 19 5 463 10 486 3.28e-40 151
Msa0804110 AT4G14090.1 27.254 477 288 17 4 457 12 452 2.94e-39 147
Msa0804110 AT2G36790.1 27.846 492 310 17 5 464 13 491 3.28e-39 148
Msa0804110 AT3G22250.1 25.109 458 301 15 2 439 5 440 1.61e-38 145
Msa0804110 AT3G50740.1 28.402 507 249 22 4 448 6 460 1.73e-38 146
Msa0804110 AT5G14860.1 28.376 511 268 23 5 460 8 475 7.14e-38 144
Msa0804110 AT4G34135.1 26.327 490 312 11 5 462 11 483 1.10e-37 144
Msa0804110 AT2G29710.1 24.846 487 310 12 1 458 1 460 1.97e-37 143
Msa0804110 AT5G03490.1 26.243 503 277 18 2 463 16 465 1.75e-36 140
Msa0804110 AT2G29730.1 23.829 491 324 12 1 465 1 467 3.27e-36 139
Msa0804110 AT1G73880.1 26.556 482 307 16 5 464 14 470 4.26e-36 139
Msa0804110 AT1G07250.1 27.926 487 275 20 7 449 7 461 1.54e-35 138
Msa0804110 AT1G10400.1 27.778 486 293 22 1 457 3 459 4.07e-35 136
Msa0804110 AT2G30140.2 27.004 474 292 17 5 460 13 450 5.03e-35 136
Msa0804110 AT2G30140.1 26.582 474 295 16 5 460 13 451 5.93e-35 135
Msa0804110 AT3G53150.1 26.990 515 290 18 5 460 22 509 4.82e-34 134
Msa0804110 AT2G18570.1 26.547 501 278 23 1 453 1 459 8.78e-34 132
Msa0804110 AT3G21790.1 24.194 496 315 16 5 460 4 478 1.48e-33 132
Msa0804110 AT4G36770.1 26.955 486 267 21 5 444 4 447 1.14e-32 129
Msa0804110 AT2G16890.2 25.259 483 310 16 5 460 9 467 2.99e-32 128
Msa0804110 AT5G37950.2 32.374 278 163 8 106 379 81 337 1.51e-31 124
Msa0804110 AT2G18560.1 30.741 270 142 9 213 453 116 369 3.60e-31 124
Msa0804110 AT5G37950.1 32.616 279 167 9 106 379 81 343 5.71e-31 122
Msa0804110 AT2G29740.1 25.820 488 300 16 7 457 9 471 8.29e-31 124
Msa0804110 AT3G21750.1 26.364 440 256 15 5 411 4 408 1.43e-30 124
Msa0804110 AT2G29750.1 24.846 487 314 15 2 457 5 470 1.83e-30 123
Msa0804110 AT4G15260.1 31.136 273 152 8 211 458 91 352 2.10e-30 121
Msa0804110 AT2G16890.3 26.492 419 266 14 5 405 9 403 2.17e-30 122
Msa0804110 AT4G15280.1 25.151 497 300 16 5 458 4 471 4.00e-30 122
Msa0804110 AT1G07260.1 29.658 263 157 8 212 457 217 468 4.19e-30 122
Msa0804110 AT1G07240.1 28.797 316 191 11 162 460 177 475 4.41e-30 122
Msa0804110 AT4G15280.2 25.151 497 300 16 5 458 36 503 4.50e-30 122
Msa0804110 AT2G30150.2 25.523 478 302 18 5 463 13 455 1.13e-29 121
Msa0804110 AT3G21780.1 25.117 426 267 13 5 405 4 402 1.21e-29 121
Msa0804110 AT3G21760.1 24.424 434 274 11 5 406 4 415 1.25e-29 121
Msa0804110 AT5G49690.1 26.105 475 298 17 2 460 7 444 1.12e-28 118
Msa0804110 AT1G51210.1 23.956 455 284 13 4 436 19 433 1.76e-28 117
Msa0804110 AT3G21800.1 27.400 427 258 16 6 405 5 406 2.00e-28 117
Msa0804110 AT2G30150.1 25.370 473 299 18 10 463 2 439 2.82e-28 117
Msa0804110 AT5G65550.1 25.783 415 270 11 5 404 9 400 6.37e-28 116
Msa0804110 AT5G12890.1 37.895 190 98 7 213 391 224 404 3.79e-27 114
Msa0804110 AT1G06000.1 29.304 273 163 9 205 457 168 430 1.26e-25 109
Msa0804110 AT5G54010.1 24.821 419 258 15 5 405 6 385 1.64e-21 97.1
Msa0804110 AT4G01070.2 27.410 332 194 10 2 317 5 305 1.98e-20 92.8
Msa0804110 AT2G22590.1 25.000 412 264 15 5 396 15 401 2.17e-17 84.7
Msa0804110 AT4G27560.1 23.261 417 264 16 5 404 7 384 3.12e-17 84.3
Msa0804110 AT1G64910.1 24.344 419 260 16 2 405 3 379 9.65e-17 82.8
Msa0804110 AT4G27570.1 23.002 413 270 14 5 404 7 384 2.77e-16 81.3
Msa0804110 AT5G54060.1 22.269 476 330 11 6 462 14 468 7.29e-16 80.1
Msa0804110 AT5G53990.1 32.117 137 88 2 273 405 244 379 1.05e-14 76.6
Msa0804110 AT4G09500.2 25.604 414 253 17 5 404 6 378 2.07e-14 75.5
Msa0804110 AT1G50580.1 25.837 418 232 19 5 396 6 371 3.03e-14 75.1
Msa0804110 AT4G34135.2 24.107 336 212 9 5 317 11 326 1.67e-13 72.0
Msa0804110 AT2G22930.1 24.038 416 261 15 3 404 4 378 1.81e-13 72.8
Msa0804110 AT4G09500.1 33.846 130 79 4 280 404 226 353 2.34e-12 68.9

Find 98 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATAAGTTGCATTATTT+TGG 0.129986 5_3:+19685977 Msa0804110:CDS
TCTATCCACTTTGAAGAAAT+TGG 0.151742 5_3:-19687465 None:intergenic
TTATATACTGAATCAAATTT+TGG 0.160775 5_3:-19688042 None:intergenic
TGCTACTAAAATGGCGGATT+TGG 0.188389 5_3:+19687976 Msa0804110:CDS
TGGGGAAGTGGAGACGAATT+TGG 0.191985 5_3:-19687370 None:intergenic
AGGCTTACCATACATATTTA+TGG 0.193194 5_3:-19685928 None:intergenic
TTCAAAATCTGCTACTAAAA+TGG 0.254659 5_3:+19687967 Msa0804110:CDS
CTAACCCAAGCATCACTTAA+AGG 0.264331 5_3:+19687296 Msa0804110:CDS
ACTGATTTGGCTGCTGAGTT+TGG 0.266869 5_3:+19686023 Msa0804110:CDS
GACGAATTTGGGAGAGAATT+GGG 0.288272 5_3:-19687358 None:intergenic
GAGAACAAATACTTGAGTTT+TGG 0.290736 5_3:+19687567 Msa0804110:CDS
CCAAACATGGTACAAGAAAA+AGG 0.313624 5_3:+19687635 Msa0804110:CDS
GGGGAAGTGGAGACGAATTT+GGG 0.316790 5_3:-19687369 None:intergenic
AAAATTTGATTCAGTATATA+AGG 0.317414 5_3:+19688044 Msa0804110:CDS
AAGGAGAAGCATCCTGGATT+TGG 0.317655 5_3:+19685879 Msa0804110:CDS
TTTCGGTACATCAAACAAAA+TGG 0.331422 5_3:+19687244 Msa0804110:CDS
CTGATTTGGCTGCTGAGTTT+GGG 0.334780 5_3:+19686024 Msa0804110:CDS
AGTGCGTAGTATACCTCTAA+TGG 0.342564 5_3:-19686135 None:intergenic
AGACGAATTTGGGAGAGAAT+TGG 0.348002 5_3:-19687359 None:intergenic
GTAAGTGAGGTTTGGAAGCT+TGG 0.358809 5_3:+19687863 Msa0804110:CDS
GGGCCAATAGTGTAGAGTTT+GGG 0.365185 5_3:-19687389 None:intergenic
CTGATCAACCACTTAATAGT+AGG 0.368297 5_3:+19687837 Msa0804110:CDS
CATTGCCTTTAAGTGATGCT+TGG 0.369928 5_3:-19687301 None:intergenic
AAACTTTATCTAAAACGATA+TGG 0.371646 5_3:-19687268 None:intergenic
GAATATGGTGAATGATATTA+TGG 0.374024 5_3:+19687925 Msa0804110:CDS
TTTCTGTATGCCCAAGCTCT+TGG 0.375016 5_3:+19686097 Msa0804110:CDS
GTGGTGTGCCTATGATTTGT+TGG 0.376618 5_3:+19687804 Msa0804110:CDS
CAAAATAAGGAGAAGCATCC+TGG 0.377170 5_3:+19685873 Msa0804110:CDS
TCAGTTGTATATGTTAGTTT+TGG 0.386729 5_3:+19687524 Msa0804110:CDS
GAGAGGTTTGATTGTGGAGT+GGG 0.400334 5_3:+19687694 Msa0804110:CDS
TGGGCCAATAGTGTAGAGTT+TGG 0.401252 5_3:-19687390 None:intergenic
TGGTGACCTTGCTACTGATT+TGG 0.401952 5_3:+19686010 Msa0804110:CDS
TAGGAATGTTGTTGAGAATA+TGG 0.403651 5_3:+19687910 Msa0804110:CDS
TGTGGACGTACTCAGTGTTT+AGG 0.406113 5_3:-19685767 None:intergenic
ATTGCCTTTAAGTGATGCTT+GGG 0.413731 5_3:-19687300 None:intergenic
TAGTGTAGAGTTTGGGGAAG+TGG 0.414276 5_3:-19687382 None:intergenic
TTCCCCAAACTCTACACTAT+TGG 0.415394 5_3:+19687386 Msa0804110:CDS
ATGGTCTTGAATTGAAGCTT+AGG 0.425350 5_3:-19685840 None:intergenic
CTCGTTGCACTCCAAGAGCT+TGG 0.425822 5_3:-19686108 None:intergenic
TGAGGTTTGGAAGCTTGGAT+TGG 0.438209 5_3:+19687868 Msa0804110:CDS
GTAGGTTTGTAAGTGAGGTT+TGG 0.440134 5_3:+19687855 Msa0804110:CDS
CTTACAAACCTACTATTAAG+TGG 0.443768 5_3:-19687845 None:intergenic
AAATAAGGCCAACAAATCAT+AGG 0.459700 5_3:-19687812 None:intergenic
ACGAATTTGGGAGAGAATTG+GGG 0.461848 5_3:-19687357 None:intergenic
GCTTGAGCATTGTGTTTACA+TGG 0.467581 5_3:-19685704 None:intergenic
CAACTCCAATTTCTTCAAAG+TGG 0.471156 5_3:+19687460 Msa0804110:CDS
TGTAGAGATCTTCCACGTTT+CGG 0.471834 5_3:+19687227 Msa0804110:CDS
GTGCGTAGTATACCTCTAAT+GGG 0.477570 5_3:-19686134 None:intergenic
TGCAACGAGATTCCCATTAG+AGG 0.478288 5_3:+19686122 Msa0804110:CDS
GTGTTTACATGGCCTTGTGC+TGG 0.482580 5_3:-19685693 None:intergenic
ATTTCCTCCATAAATATGTA+TGG 0.483586 5_3:+19685921 Msa0804110:CDS
TAAGGAGAGAGGTTTGATTG+TGG 0.483641 5_3:+19687688 Msa0804110:CDS
CTGTTGCTGCTAGTAGCGTC+TGG 0.486057 5_3:+19686069 Msa0804110:CDS
ACTTGAGGAAAAGACTAGTA+AGG 0.494052 5_3:+19687670 Msa0804110:CDS
TCGTTGCACTCCAAGAGCTT+GGG 0.495331 5_3:-19686107 None:intergenic
CTATTAGCCCATAAAATATG+AGG 0.502418 5_3:+19688068 Msa0804110:exon
TGGTCTTGAATTGAAGCTTA+GGG 0.509318 5_3:-19685839 None:intergenic
ACATGGCCTTGTGCTGGACA+TGG 0.511830 5_3:-19685687 None:intergenic
AGACAAAATAATGTCGAACT+TGG 0.512736 5_3:-19688442 None:intergenic
ACTTTGGAGAGTGTGGTTTG+TGG 0.513568 5_3:+19687785 Msa0804110:CDS
ATATGAAAGATGTTTGTGAT+AGG 0.519622 5_3:+19687891 Msa0804110:CDS
ACAATAATATCTCTTAAAGA+AGG 0.522945 5_3:-19685948 None:intergenic
ATTTATAGGCGACGAGGACA+TGG 0.524524 5_3:+19687160 Msa0804110:intron
TAGTGGATGGAATTCTACTT+TGG 0.524583 5_3:+19687769 Msa0804110:CDS
TTGTTCTCTTGTCATTGTTG+TGG 0.527140 5_3:-19687552 None:intergenic
AGAGAGGTTTGATTGTGGAG+TGG 0.527185 5_3:+19687693 Msa0804110:CDS
GAAAAGACTAGTAAGGAGAG+AGG 0.530175 5_3:+19687677 Msa0804110:CDS
TAATAGTAGGTTTGTAAGTG+AGG 0.531816 5_3:+19687850 Msa0804110:CDS
AGATTCGAGCCATGTCATGC+AGG 0.543292 5_3:-19687489 None:intergenic
AATAAGAAACGTGCCAGACA+TGG 0.547894 5_3:+19687190 Msa0804110:CDS
TGATATTATGGTGAACAAGA+AGG 0.549365 5_3:+19687937 Msa0804110:CDS
GTATTGAGGTGGTGGTGAAG+TGG 0.552097 5_3:-19687410 None:intergenic
CAAGCATCACTTAAAGGCAA+TGG 0.555557 5_3:+19687302 Msa0804110:CDS
GTTGTTGTAGGAGGAACCAT+CGG 0.556378 5_3:-19688017 None:intergenic
ACCATCGGGACTTACACTCT+TGG 0.558630 5_3:-19688002 None:intergenic
GAATTCTACTTTGGAGAGTG+TGG 0.566333 5_3:+19687778 Msa0804110:CDS
TTGTTGTAGGAGGAACCATC+GGG 0.572977 5_3:-19688016 None:intergenic
AGGACTAATAAAAGAACTTG+AGG 0.581885 5_3:+19687655 Msa0804110:CDS
TCAAACTAATGAGTCTGTTG+TGG 0.583783 5_3:-19685785 None:intergenic
CATGGCCTTGTGCTGGACAT+GGG 0.589394 5_3:-19685686 None:intergenic
TATTGAGGTGGTGGTGAAGT+GGG 0.589759 5_3:-19687409 None:intergenic
TGGATAGAACCTGCATGACA+TGG 0.591199 5_3:+19687480 Msa0804110:CDS
TGTGGAGTGGGTTCCACAAG+AGG 0.592500 5_3:+19687706 Msa0804110:CDS
TCCAAGAGTGTAAGTCCCGA+TGG 0.595995 5_3:+19688001 Msa0804110:CDS
ATCTTCCCATGTCCAGCACA+AGG 0.602792 5_3:+19685681 Msa0804110:CDS
TTTAGTTTATCGAATATGAG+TGG 0.602955 5_3:+19688285 Msa0804110:three_prime_UTR
GGAGTGGGTTCCACAAGAGG+AGG 0.608195 5_3:+19687709 Msa0804110:CDS
TGTGACAAAACCTCCTCTTG+TGG 0.614832 5_3:-19687719 None:intergenic
GGCCAATAGTGTAGAGTTTG+GGG 0.621309 5_3:-19687388 None:intergenic
CTTACCATACATATTTATGG+AGG 0.622125 5_3:-19685925 None:intergenic
ACATATACAACTGACTTCAA+CGG 0.624862 5_3:-19687515 None:intergenic
AAAATCTGCTACTAAAATGG+CGG 0.633747 5_3:+19687970 Msa0804110:CDS
CAGCAGCCAAATCAGTAGCA+AGG 0.634571 5_3:-19686016 None:intergenic
TATTATGGTGAACAAGAAGG+AGG 0.639898 5_3:+19687940 Msa0804110:CDS
TTGTTTGATGTACCGAAACG+TGG 0.645855 5_3:-19687239 None:intergenic
GTGGGTGATTAGACCAAACA+TGG 0.685305 5_3:+19687622 Msa0804110:CDS
TGTTTAATTTATAGGCGACG+AGG 0.686500 5_3:+19687154 Msa0804110:intron
CATGGGAAGATTAACACATG+TGG 0.740669 5_3:-19685669 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTAAATCAAGAAATTA+GGG - chr5_3:19686251-19686270 None:intergenic 10.0%
!! AATAATTAAATCAAGAAATT+AGG - chr5_3:19686252-19686271 None:intergenic 10.0%
!! AGATAAGTTTAAATAAAATA+AGG - chr5_3:19686817-19686836 None:intergenic 10.0%
!! ATTAAGTAAAAAAAATTGAA+AGG - chr5_3:19687045-19687064 None:intergenic 10.0%
!!! ATTTTGAATTAAAAGAAGTT+CGG - chr5_3:19685733-19685752 None:intergenic 15.0%
!! TAATTAAATCAAGAAATTAG+GGG - chr5_3:19686250-19686269 None:intergenic 15.0%
!! TTAATTATTATACATATGCA+AGG + chr5_3:19686263-19686282 Msa0804110:intron 15.0%
!! ACTACATAAATTATATAGTT+TGG - chr5_3:19686289-19686308 None:intergenic 15.0%
!!! TTATATACTGAATCAAATTT+TGG - chr5_3:19688045-19688064 None:intergenic 15.0%
!! AAAATTTGATTCAGTATATA+AGG + chr5_3:19688044-19688063 Msa0804110:CDS 15.0%
!! AAATTGAGATTGTTGAAAAA+TGG + chr5_3:19685641-19685660 Msa0804110:exon 20.0%
!! ACAATAATATCTCTTAAAGA+AGG - chr5_3:19685951-19685970 None:intergenic 20.0%
!!! GAAAATAAGTTGCATTATTT+TGG + chr5_3:19685977-19685996 Msa0804110:CDS 20.0%
!! TAAATAAAATAAGGCATATG+TGG - chr5_3:19686808-19686827 None:intergenic 20.0%
!!! GTTTTGGTTGTTTAATTTAT+AGG + chr5_3:19687146-19687165 Msa0804110:intron 20.0%
!!! AAACTTTATCTAAAACGATA+TGG - chr5_3:19687271-19687290 None:intergenic 20.0%
!!! AAATATGAGAAGTTTTTAGT+AGG - chr5_3:19688110-19688129 None:intergenic 20.0%
!!! CTTATTTTGAAAATCAGAGA+TGG - chr5_3:19685862-19685881 None:intergenic 25.0%
!! CATCTCTGATTTTCAAAATA+AGG + chr5_3:19685860-19685879 Msa0804110:CDS 25.0%
! ATTTCCTCCATAAATATGTA+TGG + chr5_3:19685921-19685940 Msa0804110:CDS 25.0%
!!! ATAAGTTGCATTATTTTGGA+TGG + chr5_3:19685981-19686000 Msa0804110:CDS 25.0%
! ATCTTGGGAAAATACTTAAT+TGG + chr5_3:19686436-19686455 Msa0804110:intron 25.0%
!! ATGAAATATACTTTTGTGTG+TGG + chr5_3:19686558-19686577 Msa0804110:intron 25.0%
!! TGAAATATACTTTTGTGTGT+GGG + chr5_3:19686559-19686578 Msa0804110:intron 25.0%
! TAAGACTTTGTAAAAGAGAT+TGG + chr5_3:19686691-19686710 Msa0804110:intron 25.0%
! AAGACTTTGTAAAAGAGATT+GGG + chr5_3:19686692-19686711 Msa0804110:intron 25.0%
! AGCTTATTGAATTATGACAT+AGG - chr5_3:19686757-19686776 None:intergenic 25.0%
!! GATTTATCTAATAAAAGCGT+AGG + chr5_3:19686963-19686982 Msa0804110:intron 25.0%
!! AATATGAGTTATGTGTGTTT+TGG + chr5_3:19687130-19687149 Msa0804110:intron 25.0%
!!! TTGTTTTTTTCATGGTATTG+AGG - chr5_3:19687427-19687446 None:intergenic 25.0%
!!! TGATGATGTTGTTTTTTTCA+TGG - chr5_3:19687435-19687454 None:intergenic 25.0%
!!! TCAGTTGTATATGTTAGTTT+TGG + chr5_3:19687524-19687543 Msa0804110:CDS 25.0%
! ATATGAAAGATGTTTGTGAT+AGG + chr5_3:19687891-19687910 Msa0804110:CDS 25.0%
! GAATATGGTGAATGATATTA+TGG + chr5_3:19687925-19687944 Msa0804110:CDS 25.0%
! TTCAAAATCTGCTACTAAAA+TGG + chr5_3:19687967-19687986 Msa0804110:CDS 25.0%
!! TATACTGAATCAAATTTTGG+AGG - chr5_3:19688042-19688061 None:intergenic 25.0%
!! TTTAGTTTATCGAATATGAG+TGG + chr5_3:19688285-19688304 Msa0804110:three_prime_UTR 25.0%
!! TCTCTTTTGATACAAATAAG+TGG + chr5_3:19688357-19688376 Msa0804110:three_prime_UTR 25.0%
CTTACCATACATATTTATGG+AGG - chr5_3:19685928-19685947 None:intergenic 30.0%
AGGCTTACCATACATATTTA+TGG - chr5_3:19685931-19685950 None:intergenic 30.0%
!!! ATTATTTTGGATGGAGGTTT+TGG + chr5_3:19685990-19686009 Msa0804110:CDS 30.0%
! CAAACTGTTCTTAGAGTTTT+TGG + chr5_3:19686311-19686330 Msa0804110:intron 30.0%
AATGTTATAGACGAACATCT+TGG + chr5_3:19686420-19686439 Msa0804110:intron 30.0%
ATGTTATAGACGAACATCTT+GGG + chr5_3:19686421-19686440 Msa0804110:intron 30.0%
CATACCACAATTCAAAACTT+TGG + chr5_3:19687085-19687104 Msa0804110:intron 30.0%
!!! ACTACCAAAGTTTTGAATTG+TGG - chr5_3:19687092-19687111 None:intergenic 30.0%
TTTCGGTACATCAAACAAAA+TGG + chr5_3:19687244-19687263 Msa0804110:CDS 30.0%
!!! TTTTTTTCATGGTATTGAGG+TGG - chr5_3:19687424-19687443 None:intergenic 30.0%
! TCTATCCACTTTGAAGAAAT+TGG - chr5_3:19687468-19687487 None:intergenic 30.0%
! ACATATACAACTGACTTCAA+CGG - chr5_3:19687518-19687537 None:intergenic 30.0%
! GAGAACAAATACTTGAGTTT+TGG + chr5_3:19687567-19687586 Msa0804110:CDS 30.0%
ACAGCAAAAAAACATTCTTG+TGG + chr5_3:19687603-19687622 Msa0804110:CDS 30.0%
CAGCAAAAAAACATTCTTGT+GGG + chr5_3:19687604-19687623 Msa0804110:CDS 30.0%
AGGACTAATAAAAGAACTTG+AGG + chr5_3:19687655-19687674 Msa0804110:CDS 30.0%
AAATAAGGCCAACAAATCAT+AGG - chr5_3:19687815-19687834 None:intergenic 30.0%
AGTGGTTGATCAGAAAAATA+AGG - chr5_3:19687830-19687849 None:intergenic 30.0%
CTTACAAACCTACTATTAAG+TGG - chr5_3:19687848-19687867 None:intergenic 30.0%
TAATAGTAGGTTTGTAAGTG+AGG + chr5_3:19687850-19687869 Msa0804110:CDS 30.0%
TAGGAATGTTGTTGAGAATA+TGG + chr5_3:19687910-19687929 Msa0804110:CDS 30.0%
TGATATTATGGTGAACAAGA+AGG + chr5_3:19687937-19687956 Msa0804110:CDS 30.0%
AAAATCTGCTACTAAAATGG+CGG + chr5_3:19687970-19687989 Msa0804110:CDS 30.0%
CTATTAGCCCATAAAATATG+AGG + chr5_3:19688068-19688087 Msa0804110:exon 30.0%
!!! AGAAGTTTTTAGTAGGAGAA+TGG - chr5_3:19688103-19688122 None:intergenic 30.0%
TACATACTTCAAAAACATCG+AGG + chr5_3:19688171-19688190 Msa0804110:three_prime_UTR 30.0%
ACATACTTCAAAAACATCGA+GGG + chr5_3:19688172-19688191 Msa0804110:three_prime_UTR 30.0%
!!! AGTGGTTTTGAGTCATTTTT+TGG + chr5_3:19688303-19688322 Msa0804110:three_prime_UTR 30.0%
AGACAAAATAATGTCGAACT+TGG - chr5_3:19688445-19688464 None:intergenic 30.0%
TCAAACTAATGAGTCTGTTG+TGG - chr5_3:19685788-19685807 None:intergenic 35.0%
! TGGTCTTGAATTGAAGCTTA+GGG - chr5_3:19685842-19685861 None:intergenic 35.0%
! ATGGTCTTGAATTGAAGCTT+AGG - chr5_3:19685843-19685862 None:intergenic 35.0%
! ACAATGTTTTCTCCAAATCC+AGG - chr5_3:19685894-19685913 None:intergenic 35.0%
!!! AGTTGCATTATTTTGGATGG+AGG + chr5_3:19685984-19686003 Msa0804110:CDS 35.0%
TCTTGTACGTTAGATCTGTT+TGG + chr5_3:19686634-19686653 Msa0804110:intron 35.0%
CTCACTCTAAGCAATTTATG+TGG + chr5_3:19686890-19686909 Msa0804110:intron 35.0%
! TGTTTAATTTATAGGCGACG+AGG + chr5_3:19687154-19687173 Msa0804110:intron 35.0%
! CGAATTATGTTTTCCATGTC+TGG - chr5_3:19687206-19687225 None:intergenic 35.0%
ATTGCCTTTAAGTGATGCTT+GGG - chr5_3:19687303-19687322 None:intergenic 35.0%
CAACTCCAATTTCTTCAAAG+TGG + chr5_3:19687460-19687479 Msa0804110:CDS 35.0%
TTGTTCTCTTGTCATTGTTG+TGG - chr5_3:19687555-19687574 None:intergenic 35.0%
!! CAAATACTTGAGTTTTGGCA+CGG + chr5_3:19687572-19687591 Msa0804110:CDS 35.0%
! CCTTTTTCTTGTACCATGTT+TGG - chr5_3:19687638-19687657 None:intergenic 35.0%
CCAAACATGGTACAAGAAAA+AGG + chr5_3:19687635-19687654 Msa0804110:CDS 35.0%
ACTTGAGGAAAAGACTAGTA+AGG + chr5_3:19687670-19687689 Msa0804110:CDS 35.0%
!!! CTTTTTTGACACATAGTGGA+TGG + chr5_3:19687756-19687775 Msa0804110:CDS 35.0%
! TAGTGGATGGAATTCTACTT+TGG + chr5_3:19687769-19687788 Msa0804110:CDS 35.0%
CTGATCAACCACTTAATAGT+AGG + chr5_3:19687837-19687856 Msa0804110:CDS 35.0%
TATTATGGTGAACAAGAAGG+AGG + chr5_3:19687940-19687959 Msa0804110:CDS 35.0%
!! CAAATTTTGGAGGTTGTTGT+AGG - chr5_3:19688032-19688051 None:intergenic 35.0%
!! TTTTTAGTAGGAGAATGGCA+GGG - chr5_3:19688098-19688117 None:intergenic 35.0%
CATGGGAAGATTAACACATG+TGG - chr5_3:19685672-19685691 None:intergenic 40.0%
! GCTTGAGCATTGTGTTTACA+TGG - chr5_3:19685707-19685726 None:intergenic 40.0%
!! CAAAATAAGGAGAAGCATCC+TGG + chr5_3:19685873-19685892 Msa0804110:CDS 40.0%
GTGCGTAGTATACCTCTAAT+GGG - chr5_3:19686137-19686156 None:intergenic 40.0%
AGTGCGTAGTATACCTCTAA+TGG - chr5_3:19686138-19686157 None:intergenic 40.0%
! TTGGATTGACTTAGCTTACG+TGG + chr5_3:19686653-19686672 Msa0804110:intron 40.0%
! TGGATTGACTTAGCTTACGT+GGG + chr5_3:19686654-19686673 Msa0804110:intron 40.0%
GGCATATGTGGAATGAGAAA+AGG - chr5_3:19686796-19686815 None:intergenic 40.0%
AATAAGAAACGTGCCAGACA+TGG + chr5_3:19687190-19687209 Msa0804110:CDS 40.0%
TGTAGAGATCTTCCACGTTT+CGG + chr5_3:19687227-19687246 Msa0804110:CDS 40.0%
TTGTTTGATGTACCGAAACG+TGG - chr5_3:19687242-19687261 None:intergenic 40.0%
CTAACCCAAGCATCACTTAA+AGG + chr5_3:19687296-19687315 Msa0804110:CDS 40.0%
CATTGCCTTTAAGTGATGCT+TGG - chr5_3:19687304-19687323 None:intergenic 40.0%
CAAGCATCACTTAAAGGCAA+TGG + chr5_3:19687302-19687321 Msa0804110:CDS 40.0%
ACGAATTTGGGAGAGAATTG+GGG - chr5_3:19687360-19687379 None:intergenic 40.0%
GACGAATTTGGGAGAGAATT+GGG - chr5_3:19687361-19687380 None:intergenic 40.0%
AGACGAATTTGGGAGAGAAT+TGG - chr5_3:19687362-19687381 None:intergenic 40.0%
TTCCCCAAACTCTACACTAT+TGG + chr5_3:19687386-19687405 Msa0804110:CDS 40.0%
!! TTTTCATGGTATTGAGGTGG+TGG - chr5_3:19687421-19687440 None:intergenic 40.0%
GAAAAGACTAGTAAGGAGAG+AGG + chr5_3:19687677-19687696 Msa0804110:CDS 40.0%
TAAGGAGAGAGGTTTGATTG+TGG + chr5_3:19687688-19687707 Msa0804110:CDS 40.0%
! GTTTTGTCACACAAGGCAAT+TGG + chr5_3:19687731-19687750 Msa0804110:CDS 40.0%
!!! GGTGCTTTTTTGACACATAG+TGG + chr5_3:19687752-19687771 Msa0804110:CDS 40.0%
! GAATTCTACTTTGGAGAGTG+TGG + chr5_3:19687778-19687797 Msa0804110:CDS 40.0%
GTAGGTTTGTAAGTGAGGTT+TGG + chr5_3:19687855-19687874 Msa0804110:CDS 40.0%
!! TGCTACTAAAATGGCGGATT+TGG + chr5_3:19687976-19687995 Msa0804110:CDS 40.0%
!! ATTTTGGAGGTTGTTGTAGG+AGG - chr5_3:19688029-19688048 None:intergenic 40.0%
! GGGGAAGCCTCATATTTTAT+GGG - chr5_3:19688078-19688097 None:intergenic 40.0%
! AGGGGAAGCCTCATATTTTA+TGG - chr5_3:19688079-19688098 None:intergenic 40.0%
! TTTTAGTAGGAGAATGGCAG+GGG - chr5_3:19688097-19688116 None:intergenic 40.0%
!!! GTTTTTAGTAGGAGAATGGC+AGG - chr5_3:19688099-19688118 None:intergenic 40.0%
ACTTCAAAAACATCGAGGGA+CGG + chr5_3:19688176-19688195 Msa0804110:three_prime_UTR 40.0%
TGTGGACGTACTCAGTGTTT+AGG - chr5_3:19685770-19685789 None:intergenic 45.0%
!! AAGGAGAAGCATCCTGGATT+TGG + chr5_3:19685879-19685898 Msa0804110:CDS 45.0%
! TGGTGACCTTGCTACTGATT+TGG + chr5_3:19686010-19686029 Msa0804110:CDS 45.0%
!! ACTGATTTGGCTGCTGAGTT+TGG + chr5_3:19686023-19686042 Msa0804110:CDS 45.0%
!! CTGATTTGGCTGCTGAGTTT+GGG + chr5_3:19686024-19686043 Msa0804110:CDS 45.0%
TTTCTGTATGCCCAAGCTCT+TGG + chr5_3:19686097-19686116 Msa0804110:CDS 45.0%
TGCAACGAGATTCCCATTAG+AGG + chr5_3:19686122-19686141 Msa0804110:CDS 45.0%
ATGAGAAAAGGCAAAGCTCG+CGG - chr5_3:19686784-19686803 None:intergenic 45.0%
ATTTATAGGCGACGAGGACA+TGG + chr5_3:19687160-19687179 Msa0804110:intron 45.0%
TAGTGTAGAGTTTGGGGAAG+TGG - chr5_3:19687385-19687404 None:intergenic 45.0%
GGCCAATAGTGTAGAGTTTG+GGG - chr5_3:19687391-19687410 None:intergenic 45.0%
GGGCCAATAGTGTAGAGTTT+GGG - chr5_3:19687392-19687411 None:intergenic 45.0%
TGGGCCAATAGTGTAGAGTT+TGG - chr5_3:19687393-19687412 None:intergenic 45.0%
! TATTGAGGTGGTGGTGAAGT+GGG - chr5_3:19687412-19687431 None:intergenic 45.0%
TGGATAGAACCTGCATGACA+TGG + chr5_3:19687480-19687499 Msa0804110:CDS 45.0%
GTGGGTGATTAGACCAAACA+TGG + chr5_3:19687622-19687641 Msa0804110:CDS 45.0%
AGAGAGGTTTGATTGTGGAG+TGG + chr5_3:19687693-19687712 Msa0804110:CDS 45.0%
GAGAGGTTTGATTGTGGAGT+GGG + chr5_3:19687694-19687713 Msa0804110:CDS 45.0%
TGTGACAAAACCTCCTCTTG+TGG - chr5_3:19687722-19687741 None:intergenic 45.0%
!! AGAGGAGGTTTTGTCACACA+AGG + chr5_3:19687724-19687743 Msa0804110:CDS 45.0%
! ACTTTGGAGAGTGTGGTTTG+TGG + chr5_3:19687785-19687804 Msa0804110:CDS 45.0%
! GTGGTGTGCCTATGATTTGT+TGG + chr5_3:19687804-19687823 Msa0804110:CDS 45.0%
GTAAGTGAGGTTTGGAAGCT+TGG + chr5_3:19687863-19687882 Msa0804110:CDS 45.0%
TGAGGTTTGGAAGCTTGGAT+TGG + chr5_3:19687868-19687887 Msa0804110:CDS 45.0%
TTGTTGTAGGAGGAACCATC+GGG - chr5_3:19688019-19688038 None:intergenic 45.0%
GTTGTTGTAGGAGGAACCAT+CGG - chr5_3:19688020-19688039 None:intergenic 45.0%
ATCTTCCCATGTCCAGCACA+AGG + chr5_3:19685681-19685700 Msa0804110:CDS 50.0%
!! GTGTTTACATGGCCTTGTGC+TGG - chr5_3:19685696-19685715 None:intergenic 50.0%
CAGCAGCCAAATCAGTAGCA+AGG - chr5_3:19686019-19686038 None:intergenic 50.0%
TCGTTGCACTCCAAGAGCTT+GGG - chr5_3:19686110-19686129 None:intergenic 50.0%
GGGGAAGTGGAGACGAATTT+GGG - chr5_3:19687372-19687391 None:intergenic 50.0%
TGGGGAAGTGGAGACGAATT+TGG - chr5_3:19687373-19687392 None:intergenic 50.0%
! GTATTGAGGTGGTGGTGAAG+TGG - chr5_3:19687413-19687432 None:intergenic 50.0%
AGATTCGAGCCATGTCATGC+AGG - chr5_3:19687492-19687511 None:intergenic 50.0%
! TCCAAGAGTGTAAGTCCCGA+TGG + chr5_3:19688001-19688020 Msa0804110:CDS 50.0%
ACCATCGGGACTTACACTCT+TGG - chr5_3:19688005-19688024 None:intergenic 50.0%
!! CATGGCCTTGTGCTGGACAT+GGG - chr5_3:19685689-19685708 None:intergenic 55.0%
!! ACATGGCCTTGTGCTGGACA+TGG - chr5_3:19685690-19685709 None:intergenic 55.0%
CTGTTGCTGCTAGTAGCGTC+TGG + chr5_3:19686069-19686088 Msa0804110:CDS 55.0%
CTCGTTGCACTCCAAGAGCT+TGG - chr5_3:19686111-19686130 None:intergenic 55.0%
GAAAAGGCAAAGCTCGCGGT+GGG - chr5_3:19686780-19686799 None:intergenic 55.0%
AGAAAAGGCAAAGCTCGCGG+TGG - chr5_3:19686781-19686800 None:intergenic 55.0%
! TGTGGAGTGGGTTCCACAAG+AGG + chr5_3:19687706-19687725 Msa0804110:CDS 55.0%
! GGAGTGGGTTCCACAAGAGG+AGG + chr5_3:19687709-19687728 Msa0804110:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 19685621 19688464 19685621 ID=Msa0804110;Name=Msa0804110
chr5_3 mRNA 19685621 19688464 19685621 ID=Msa0804110-mRNA-1;Parent=Msa0804110;Name=Msa0804110-mRNA-1;_AED=0.33;_eAED=0.33;_QI=39|1|1|1|1|1|2|383|465
chr5_3 exon 19685621 19686143 19685621 ID=Msa0804110-mRNA-1:exon:8077;Parent=Msa0804110-mRNA-1
chr5_3 exon 19687168 19688464 19687168 ID=Msa0804110-mRNA-1:exon:8078;Parent=Msa0804110-mRNA-1
chr5_3 five_prime_UTR 19685621 19685659 19685621 ID=Msa0804110-mRNA-1:five_prime_utr;Parent=Msa0804110-mRNA-1
chr5_3 CDS 19685660 19686143 19685660 ID=Msa0804110-mRNA-1:cds;Parent=Msa0804110-mRNA-1
chr5_3 CDS 19687168 19688081 19687168 ID=Msa0804110-mRNA-1:cds;Parent=Msa0804110-mRNA-1
chr5_3 three_prime_UTR 19688082 19688464 19688082 ID=Msa0804110-mRNA-1:three_prime_utr;Parent=Msa0804110-mRNA-1
Gene Sequence

>Msa0804110

ATGGAAACACCACATGTGTTAATCTTCCCATGTCCAGCACAAGGCCATGTAAACACAATGCTCAAGCTTGCCGAACTTCTTTTAATTCAAAATCATCACATAACATTCCTAAACACTGAGTACGTCCACAACAGACTCATTAGTTTGAATGATGATGCTAAATCAATTTCACAATGTTACCCTAAGCTTCAATTCAAGACCATCTCTGATTTTCAAAATAAGGAGAAGCATCCTGGATTTGGAGAAAACATTGTAGATGTAATTTCCTCCATAAATATGTATGGTAAGCCTTCTTTAAGAGATATTATTGTCTCTGAGAAAATAAGTTGCATTATTTTGGATGGAGGTTTTGGTGACCTTGCTACTGATTTGGCTGCTGAGTTTGGGATACAATTGATACATTTTCGTACTGTTGCTGCTAGTAGCGTCTGGATTTATTTCTGTATGCCCAAGCTCTTGGAGTGCAACGAGATTCCCATTAGAGGCGACGAGGACATGGATCGCATAATAAGAAACGTGCCAGACATGGAAAACATAATTCGATGTAGAGATCTTCCACGTTTCGGTACATCAAACAAAATGGACCATATCGTTTTAGATAAAGTTTTACAACTAACCCAAGCATCACTTAAAGGCAATGGAGTAATACTCAACACATTTGAAGATCTAGAATCCCCAATTCTCTCCCAAATTCGTCTCCACTTCCCCAAACTCTACACTATTGGCCCACTTCACCACCACCTCAATACCATGAAAAAAACAACATCATCATCTTTCAACTCCAATTTCTTCAAAGTGGATAGAACCTGCATGACATGGCTCGAATCTCAACCGTTGAAGTCAGTTGTATATGTTAGTTTTGGAAGCACCACAACAATGACAAGAGAACAAATACTTGAGTTTTGGCACGGTTTGTTGAACAGCAAAAAAACATTCTTGTGGGTGATTAGACCAAACATGGTACAAGAAAAAGGACTAATAAAAGAACTTGAGGAAAAGACTAGTAAGGAGAGAGGTTTGATTGTGGAGTGGGTTCCACAAGAGGAGGTTTTGTCACACAAGGCAATTGGTGCTTTTTTGACACATAGTGGATGGAATTCTACTTTGGAGAGTGTGGTTTGTGGTGTGCCTATGATTTGTTGGCCTTATTTTTCTGATCAACCACTTAATAGTAGGTTTGTAAGTGAGGTTTGGAAGCTTGGATTGGATATGAAAGATGTTTGTGATAGGAATGTTGTTGAGAATATGGTGAATGATATTATGGTGAACAAGAAGGAGGAGTATTCAAAATCTGCTACTAAAATGGCGGATTTGGCTTCCAAGAGTGTAAGTCCCGATGGTTCCTCCTACAACAACCTCCAAAATTTGATTCAGTATATAAGGTCTATTAGCCCATAA
Protein sequence

>Msa0804110

METPHVLIFPCPAQGHVNTMLKLAELLLIQNHHITFLNTEYVHNRLISLNDDAKSISQCYPKLQFKTISDFQNKEKHPGFGENIVDVISSINMYGKPSLRDIIVSEKISCIILDGGFGDLATDLAAEFGIQLIHFRTVAASSVWIYFCMPKLLECNEIPIRGDEDMDRIIRNVPDMENIIRCRDLPRFGTSNKMDHIVLDKVLQLTQASLKGNGVILNTFEDLESPILSQIRLHFPKLYTIGPLHHHLNTMKKTTSSSFNSNFFKVDRTCMTWLESQPLKSVVYVSFGSTTTMTREQILEFWHGLLNSKKTFLWVIRPNMVQEKGLIKELEEKTSKERGLIVEWVPQEEVLSHKAIGAFLTHSGWNSTLESVVCGVPMICWPYFSDQPLNSRFVSEVWKLGLDMKDVCDRNVVENMVNDIMVNKKEEYSKSATKMADLASKSVSPDGSSYNNLQNLIQYIRSISP*