AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1183610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183610 MtrunA17_Chr8g0335841 98.100 579 10 1 1 579 1 578 0.0 1172
Msa1183610 MtrunA17_Chr2g0298001 35.563 568 301 10 47 578 55 593 1.55e-110 343
Msa1183610 MtrunA17_Chr4g0072181 38.736 364 191 5 207 562 36 375 6.85e-84 266
Msa1183610 MtrunA17_Chr4g0072141 39.823 339 166 7 251 578 1 312 6.77e-74 238
Msa1183610 MtrunA17_Chr4g0072161 34.908 381 205 5 155 501 34 405 3.57e-71 234
Msa1183610 MtrunA17_Chr4g0067881 23.295 352 224 10 23 354 14 339 2.82e-18 88.6
Msa1183610 MtrunA17_Chr8g0391331 25.347 288 189 8 88 354 59 341 8.25e-18 87.0
Msa1183610 MtrunA17_Chr4g0025921 28.571 294 183 11 84 354 40 329 3.37e-17 85.1
Msa1183610 MtrunA17_Chr1g0150111 22.200 500 295 18 112 573 90 533 6.12e-16 80.9
Msa1183610 MtrunA17_Chr1g0211491 23.962 313 197 9 61 354 6 296 1.08e-15 80.5
Msa1183610 MtrunA17_Chr4g0025931 25.623 281 184 7 96 354 38 315 8.80e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183610 AT3G13490.1 79.541 523 104 2 60 579 80 602 0.0 875
Msa1183610 AT3G11710.1 37.391 575 277 11 52 579 73 611 4.88e-111 345
Msa1183610 AT4G26870.1 23.265 490 291 17 116 573 88 524 1.45e-20 95.9
Msa1183610 AT4G33760.1 26.415 265 171 6 109 354 84 343 6.06e-17 84.7
Msa1183610 AT4G33760.2 27.957 186 126 3 176 354 23 207 1.16e-11 67.8

Find 157 sgRNAs with CRISPR-Local

Find 548 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGATATATATAGAGATTT+AGG 0.190041 8_1:+18885870 Msa1183610:CDS
CGGGATCGATTTCAATGAAT+TGG 0.236564 8_1:+18891648 Msa1183610:CDS
GTTGTCTAATTTGATCTTCT+AGG 0.240241 8_1:-18892880 None:intergenic
TTCCTAACGGCTTTGGAGTA+TGG 0.242936 8_1:+18892998 Msa1183610:CDS
ACAATTAAACGCACGGAAAA+AGG 0.264982 8_1:+18886272 Msa1183610:CDS
TATGGAATGCCTCCAGCTTC+TGG 0.268256 8_1:+18893016 Msa1183610:CDS
TAGGTTATGTTATAATATTT+TGG 0.288428 8_1:+18893457 Msa1183610:three_prime_UTR
AAAGCTTACTGTTGATTATC+AGG 0.299156 8_1:+18891457 Msa1183610:CDS
AATCCACAAACCTGCAAAAC+TGG 0.301957 8_1:-18889299 None:intergenic
TCATCAATGGGTTCCATGTT+AGG 0.303396 8_1:-18884868 None:intergenic
CGGAGGACAATGGATTCTTT+AGG 0.322824 8_1:+18889257 Msa1183610:CDS
CGATGATTTCCTAACGGCTT+TGG 0.326372 8_1:+18892991 Msa1183610:CDS
AACAAAACTGTCCTTATTGT+TGG 0.332509 8_1:-18893213 None:intergenic
ATCTCACCAGCATTCTCTTT+AGG 0.332997 8_1:-18890210 None:intergenic
GCCAATGGAGATATCTCAAT+TGG 0.333726 8_1:-18892046 None:intergenic
TTGACACTAAGAGACGATTC+AGG 0.336175 8_1:+18885981 Msa1183610:CDS
ATTGTTGCTAGGAGAGCATT+TGG 0.336932 8_1:+18885945 Msa1183610:CDS
AATCTTGTTAAAGAAATTTC+CGG 0.340550 8_1:+18891628 Msa1183610:CDS
GTGCATGGTCTCCCTCCTCC+AGG 0.349566 8_1:-18891605 None:intergenic
TACATTCTTTCCAGGGGCTT+GGG 0.354075 8_1:+18893116 Msa1183610:intron
ACCTCTATAGTTGTAAATTC+CGG 0.362930 8_1:-18890768 None:intergenic
AGACGATTCAGGGACAATTC+AGG 0.369249 8_1:+18885992 Msa1183610:CDS
TCCAGGGGCTTGGGATTGAC+AGG 0.376818 8_1:+18893125 Msa1183610:intron
TTACATTCTTTCCAGGGGCT+TGG 0.380952 8_1:+18893115 Msa1183610:intron
ATCTTGTTAAAGAAATTTCC+GGG 0.390588 8_1:+18891629 Msa1183610:CDS
TGGAAGCTTACCTGATCTAT+AGG 0.390653 8_1:-18892489 None:intergenic
TTCATTGATTAGGGAGAAGC+TGG 0.396179 8_1:+18890106 Msa1183610:intron
TTGAAGGCATATGTTGATAT+TGG 0.396591 8_1:+18886227 Msa1183610:CDS
CTGCTAAATTCATCATGCTT+TGG 0.405344 8_1:-18891397 None:intergenic
GTACTCAAGGTCCAACAATA+AGG 0.410867 8_1:+18893202 Msa1183610:CDS
AATGATCATGTATCTATTGC+GGG 0.414985 8_1:+18885918 Msa1183610:CDS
TCATGATGCTCTTTCAACTA+AGG 0.415332 8_1:-18893388 None:intergenic
AATGTAGGTTGGATGAGCTT+TGG 0.416343 8_1:-18892010 None:intergenic
GGCTATTACATCTCTAATGC+TGG 0.425350 8_1:-18893173 None:intergenic
GAATGAAATTGTTCATCAAT+GGG 0.426216 8_1:-18884880 None:intergenic
GGGATCGATTTCAATGAATT+GGG 0.428050 8_1:+18891649 Msa1183610:CDS
ACAGGGAGTTGAGATATGTT+TGG 0.433439 8_1:+18891576 Msa1183610:intron
TATTGTTGGACCTTGAGTAC+TGG 0.435483 8_1:-18893199 None:intergenic
ATTCAAAGGTTATCTTGTCT+TGG 0.440813 8_1:+18893411 Msa1183610:three_prime_UTR
TTTCTTTATGGCAGGTGGGT+GGG 0.442944 8_1:+18890682 Msa1183610:intron
ATATATAGAGATTTAGGAAA+TGG 0.443716 8_1:+18885876 Msa1183610:CDS
GGGGCTTGGGATTGACAGGT+TGG 0.444034 8_1:+18893129 Msa1183610:intron
ATCGTCTCTTAGTGTCAAAA+AGG 0.444746 8_1:-18885976 None:intergenic
AAAGCAGCTCTTTCAACAAA+TGG 0.446908 8_1:+18892914 Msa1183610:CDS
GGCAGATTGGCATGCTTCAA+TGG 0.449344 8_1:-18891746 None:intergenic
CAGTGTGCTCTTGCAGTTCA+CGG 0.450059 8_1:+18891434 Msa1183610:CDS
TTCATTTGTGGTCGGGAACT+AGG 0.452404 8_1:+18892441 Msa1183610:CDS
GGTCGAATATTTAGAAATGA+AGG 0.453886 8_1:+18890726 Msa1183610:CDS
CTCCCTATCGGAGGTGGAAG+TGG 0.454419 8_1:-18885005 None:intergenic
GTGACATACCACAATTCTCT+TGG 0.455727 8_1:+18890151 Msa1183610:CDS
AATATCAACTCGTCATAATC+CGG 0.456214 8_1:+18890749 Msa1183610:CDS
ACGGCGGTTGCGACCGGAGG+AGG 0.461545 8_1:-18884963 None:intergenic
TGATCAGTTTGAGCAGTTGA+AGG 0.461596 8_1:+18886211 Msa1183610:CDS
CGGAACACATCAGCTACCTC+TGG 0.463336 8_1:-18888329 None:intergenic
TCTTATTCAACCACCTCCTC+CGG 0.464171 8_1:+18884950 Msa1183610:CDS
GAAATAGTAAATAATGATGA+TGG 0.470287 8_1:-18893274 None:intergenic
AGACTAAATAAAAGTATTGG+TGG 0.471614 8_1:+18884754 None:intergenic
GTTAGACCGTGATATTTGTC+AGG 0.473334 8_1:-18887841 None:intergenic
CCGTGATATTTGTCAGGAAG+TGG 0.479675 8_1:-18887835 None:intergenic
CTGATACTCGATAGATAGAA+AGG 0.480701 8_1:+18884813 Msa1183610:five_prime_UTR
TAAGTAGGTGGCCGGCAGAT+TGG 0.482101 8_1:-18891759 None:intergenic
TGAATGAAATTGTTCATCAA+TGG 0.482456 8_1:-18884881 None:intergenic
AGATATGTTTGGAAAGGCCC+TGG 0.482975 8_1:+18891587 Msa1183610:CDS
AGTCTAAAACAAATGTAGGT+TGG 0.484037 8_1:-18892021 None:intergenic
ATTGTTGGACCTTGAGTACT+GGG 0.484670 8_1:-18893198 None:intergenic
CAATTCATTGAAATCGATCC+CGG 0.486294 8_1:-18891647 None:intergenic
CAAGCTACTCTGAGTACCCT+TGG 0.488990 8_1:+18891694 Msa1183610:CDS
TGATCCTCCATTAGATCCAC+AGG 0.489528 8_1:+18892396 Msa1183610:intron
TGCATGGTCTCCCTCCTCCA+GGG 0.495010 8_1:-18891604 None:intergenic
AGAATTACGGCGGTTGCGAC+CGG 0.496601 8_1:-18884969 None:intergenic
TCGAGCCATGCGCTTGAAGA+AGG 0.504415 8_1:+18885033 Msa1183610:CDS
GTTTGGAAAGGCCCTGGAGG+AGG 0.505574 8_1:+18891593 Msa1183610:CDS
ATCGGAGGTGGAAGTGGTGG+AGG 0.505995 8_1:-18884999 None:intergenic
TTCTTTAACAAGATTGTGCA+TGG 0.506016 8_1:-18891620 None:intergenic
TTGTTCCACTCATAAGCATA+GGG 0.506743 8_1:-18885825 None:intergenic
TGTTATCAAGATTCTTTCCA+AGG 0.509846 8_1:-18891711 None:intergenic
TTATGTACCATTCCAGAAGC+TGG 0.510329 8_1:-18893028 None:intergenic
ATTGACTGATCCTATAGATC+AGG 0.512443 8_1:+18892479 Msa1183610:CDS
TGGAGGACGACGGAGAATTA+CGG 0.514870 8_1:-18884982 None:intergenic
TGACACTAAGAGACGATTCA+GGG 0.517242 8_1:+18885982 Msa1183610:CDS
TCCGGAATTTACAACTATAG+AGG 0.517384 8_1:+18890767 Msa1183610:CDS
GTTTCAGCTCTATTGCGAAA+AGG 0.520137 8_1:+18886178 Msa1183610:intron
GGGTAGTCTAAAACAAATGT+AGG 0.521669 8_1:-18892025 None:intergenic
CTCCCACTTGGGTCACAAGT+TGG 0.523779 8_1:+18893482 Msa1183610:three_prime_UTR
AATAGACTCCCTATCGGAGG+TGG 0.524551 8_1:-18885011 None:intergenic
TTTGTTCCACTCATAAGCAT+AGG 0.524967 8_1:-18885826 None:intergenic
TGTCACGAATGGTCTAGCTT+CGG 0.528109 8_1:-18890134 None:intergenic
CACCACTTCCACCTCCGATA+GGG 0.536439 8_1:+18885003 Msa1183610:CDS
CTGCGGTGTGGTTTAGCCAA+TGG 0.537930 8_1:-18892061 None:intergenic
AAAGAGCATCATGAATTCAA+AGG 0.537938 8_1:+18893397 Msa1183610:three_prime_UTR
CCACCACTTCCACCTCCGAT+AGG 0.542347 8_1:+18885002 Msa1183610:CDS
AAAAGAAGGAATAGAAAATG+AGG 0.543923 8_1:+18892943 Msa1183610:CDS
GCGGTTGCGACCGGAGGAGG+TGG 0.544216 8_1:-18884960 None:intergenic
TTCCATACTCCAAAGCCGTT+AGG 0.545247 8_1:-18893000 None:intergenic
CCCAATTGAGATATCTCCAT+TGG 0.547983 8_1:+18892045 Msa1183610:CDS
TTTGGAAAGGCCCTGGAGGA+GGG 0.552293 8_1:+18891594 Msa1183610:CDS
CCAATGGAGATATCTCAATT+GGG 0.556267 8_1:-18892045 None:intergenic
GTTATCAAGATTCTTTCCAA+GGG 0.558076 8_1:-18891710 None:intergenic
TATAGGTTGTATCAGAGATA+CGG 0.559036 8_1:+18889237 Msa1183610:intron
AACCTCGTTAAGTAGGTGGC+CGG 0.559200 8_1:-18891767 None:intergenic
AATGAAAAGTTCAAACCTCT+CGG 0.565499 8_1:-18892424 None:intergenic
ATTGAAGCATGCCAATCTGC+CGG 0.566605 8_1:+18891748 Msa1183610:CDS
TTGCGGGAAGAATTGTTGCT+AGG 0.568965 8_1:+18885934 Msa1183610:CDS
GCCAATCAACCTCGTTAAGT+AGG 0.570615 8_1:-18891774 None:intergenic
GAATGATCATGTATCTATTG+CGG 0.573107 8_1:+18885917 Msa1183610:CDS
GCTATTACATCTCTAATGCT+GGG 0.573314 8_1:-18893172 None:intergenic
TGAAACTGTTGAACCTAACA+TGG 0.574370 8_1:+18884855 Msa1183610:CDS
CCTATCGGAGGTGGAAGTGG+TGG 0.578335 8_1:-18885002 None:intergenic
GATCCACAGGTTTGACCGAG+AGG 0.578678 8_1:+18892409 Msa1183610:intron
GTTGAAGAACTTAGAAGCAA+GGG 0.578950 8_1:+18885795 Msa1183610:CDS
CGCCAACTTGTGACCCAAGT+GGG 0.581106 8_1:-18893484 None:intergenic
GTGGAAGTGGTGGAGGACGA+CGG 0.581495 8_1:-18884992 None:intergenic
AAGTACCTTCTTCAAGCGCA+TGG 0.583817 8_1:-18885038 None:intergenic
GGTGGTTGAATAAGAAGAAG+AGG 0.585694 8_1:-18884942 None:intergenic
GGTTGAAGAACTTAGAAGCA+AGG 0.589657 8_1:+18885794 Msa1183610:intron
AATAGCCTTCCCAGTACTCA+AGG 0.592780 8_1:+18893189 Msa1183610:CDS
TTGGACCTTGAGTACTGGGA+AGG 0.593720 8_1:-18893194 None:intergenic
TGGAAAGAATCTTGATAACA+AGG 0.594763 8_1:+18891714 Msa1183610:CDS
TCTTGACGATGATTTCCTAA+CGG 0.595091 8_1:+18892985 Msa1183610:CDS
ATTACGGCGGTTGCGACCGG+AGG 0.596381 8_1:-18884966 None:intergenic
AAACCTCTCGGTCAAACCTG+TGG 0.598156 8_1:-18892412 None:intergenic
GTTGATATTGGTGATATACT+AGG 0.599745 8_1:+18886239 Msa1183610:CDS
GAGTTGAGATATGTTTGGAA+AGG 0.602646 8_1:+18891581 Msa1183610:CDS
AATGCCTCCAGCTTCTGGAA+TGG 0.606421 8_1:+18893021 Msa1183610:CDS
GGATTCTTTAGGTTTCGTTG+AGG 0.620350 8_1:+18889268 Msa1183610:CDS
GGTGATATACTAGGTGCAAG+AGG 0.623168 8_1:+18886248 Msa1183610:CDS
ATTGCACCTAAAGAGAATGC+TGG 0.624253 8_1:+18890204 Msa1183610:CDS
GGCTCGAATAGACTCCCTAT+CGG 0.627417 8_1:-18885017 None:intergenic
GCAGCTCTTTCAACAAATGG+TGG 0.630345 8_1:+18892917 Msa1183610:CDS
GAATTGTGGTATGTCACGAA+TGG 0.630545 8_1:-18890145 None:intergenic
AATCAACCTCGTTAAGTAGG+TGG 0.632135 8_1:-18891771 None:intergenic
ATTGATTAGGGAGAAGCTGG+AGG 0.632319 8_1:+18890109 Msa1183610:intron
AGTCTCTTCCAAGAGAATTG+TGG 0.632957 8_1:-18890159 None:intergenic
CCACTTCCTGACAAATATCA+CGG 0.639790 8_1:+18887835 Msa1183610:CDS
TGAATTATTTGTATACCACA+TGG 0.641904 8_1:+18893339 Msa1183610:three_prime_UTR
ATCAGAGATACGGAGGACAA+TGG 0.644056 8_1:+18889247 Msa1183610:CDS
AAGAGGAACAATTAAACGCA+CGG 0.645820 8_1:+18886265 Msa1183610:CDS
CATTGGCTAAACCACACCGC+AGG 0.647461 8_1:+18892062 Msa1183610:CDS
TGAATTGGGAAATGATCTCG+AGG 0.648978 8_1:+18891663 Msa1183610:CDS
AAGCATGATGAATTTAGCAG+AGG 0.654036 8_1:+18891400 Msa1183610:CDS
TAGATATACGCTATCGCCAG+AGG 0.655561 8_1:+18887869 Msa1183610:CDS
GCGCGGATAAGAAGCGTGCG+AGG 0.659601 8_1:-18884920 None:intergenic
TTGAAGAACTTAGAAGCAAG+GGG 0.664475 8_1:+18885796 Msa1183610:CDS
TGTGTTCCGCAAAAGAGCCA+AGG 0.669538 8_1:+18888343 Msa1183610:CDS
GCGCCAACTTGTGACCCAAG+TGG 0.675674 8_1:-18893485 None:intergenic
TCGAATAGACTCCCTATCGG+AGG 0.677501 8_1:-18885014 None:intergenic
TCGATCCCTATGCTTATGAG+TGG 0.681810 8_1:+18885820 Msa1183610:CDS
TTGAATAAGAAGAAGAGGCG+CGG 0.683601 8_1:-18884937 None:intergenic
TGTACCATTCCAGAAGCTGG+AGG 0.684157 8_1:-18893025 None:intergenic
TGCCGGCCACCTACTTAACG+AGG 0.691412 8_1:+18891765 Msa1183610:CDS
TATGTTTGGAAAGGCCCTGG+AGG 0.696991 8_1:+18891590 Msa1183610:CDS
AGATATGATTGCAAATCCAG+AGG 0.699255 8_1:+18888313 Msa1183610:CDS
AGGTTGTATCAGAGATACGG+AGG 0.705032 8_1:+18889240 Msa1183610:intron
ATGCTTAATCAAATTCCATG+TGG 0.716954 8_1:-18893354 None:intergenic
AATATTATAACATAACCTAG+AGG 0.718813 8_1:-18893453 None:intergenic
AAATGTGTATACCTGCGGTG+TGG 0.776533 8_1:-18892073 None:intergenic
AGGACGACGGAGAATTACGG+CGG 0.797261 8_1:-18884979 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTATATTTGTTCTTT+AGG + chr8_1:18886066-18886085 Msa1183610:intron 10.0%
!! ATATATATATATCAAAAACA+AGG - chr8_1:18886482-18886501 None:intergenic 10.0%
!! ATAGTATAAATTATATTACA+AGG - chr8_1:18888794-18888813 None:intergenic 10.0%
!!! AATTCTTATTGTATTTTACT+TGG + chr8_1:18885241-18885260 Msa1183610:intron 15.0%
!!! ATATGAAAATTAATGGATTT+CGG + chr8_1:18885281-18885300 Msa1183610:intron 15.0%
!!! TAAATTAATGGTCTTTATTT+TGG + chr8_1:18885703-18885722 Msa1183610:intron 15.0%
!!! AAATTAATGGTCTTTATTTT+GGG + chr8_1:18885704-18885723 Msa1183610:intron 15.0%
!! AACTTTAAATTATTCTCTAA+AGG - chr8_1:18886698-18886717 None:intergenic 15.0%
!!! ACAAGACTTTTAATTTAAAT+TGG + chr8_1:18886805-18886824 Msa1183610:intron 15.0%
!! TTATGTTAAAGTGAATAAAA+TGG + chr8_1:18887263-18887282 Msa1183610:intron 15.0%
!! GTACAGTTAATAAAAAAAAA+GGG - chr8_1:18887550-18887569 None:intergenic 15.0%
!! AGTACAGTTAATAAAAAAAA+AGG - chr8_1:18887551-18887570 None:intergenic 15.0%
!! GATTTAAAGAAAATTTCAAA+AGG - chr8_1:18887724-18887743 None:intergenic 15.0%
!!! TATACTATTCTTCAAATTTT+TGG + chr8_1:18888811-18888830 Msa1183610:intron 15.0%
!! TAATTAACAAAAATAGTAAC+AGG - chr8_1:18889594-18889613 None:intergenic 15.0%
!!! TTTTTTTATCTTATTTAGCA+AGG + chr8_1:18890339-18890358 Msa1183610:intron 15.0%
!! AATAATTAGAATCAATATCT+AGG - chr8_1:18890447-18890466 None:intergenic 15.0%
!!! CATAAAGAAAAACTTTAAAA+TGG - chr8_1:18890672-18890691 None:intergenic 15.0%
!!! CATTTTAAAGTTTTTCTTTA+TGG + chr8_1:18890670-18890689 Msa1183610:intron 15.0%
!! TAACATCAAATTATAAGTAA+TGG - chr8_1:18890834-18890853 None:intergenic 15.0%
!!! CTTATAATTTGATGTTATTT+TGG + chr8_1:18890837-18890856 Msa1183610:intron 15.0%
!!! AAAACTAACTTAAATTTTCA+GGG - chr8_1:18891176-18891195 None:intergenic 15.0%
!!! TAAAACTAACTTAAATTTTC+AGG - chr8_1:18891177-18891196 None:intergenic 15.0%
!!! TCAAATTTTATCTTTGATAT+AGG + chr8_1:18891798-18891817 Msa1183610:intron 15.0%
!!! TTTGTTTCTATTATGTATTT+AGG + chr8_1:18891967-18891986 Msa1183610:intron 15.0%
!!! TAGGTTATGTTATAATATTT+TGG + chr8_1:18893457-18893476 Msa1183610:three_prime_UTR 15.0%
!! TATAAAAAGAGATATGTAAG+CGG + chr8_1:18884779-18884798 Msa1183610:five_prime_UTR 20.0%
!! ATAGATAGAAAGGAAAAAAA+TGG + chr8_1:18884823-18884842 Msa1183610:exon 20.0%
!!! AATTTTCTTTTTGGATGAAA+TGG + chr8_1:18885185-18885204 Msa1183610:intron 20.0%
!!! AGAATTTTTTTTTGCAATGT+AGG - chr8_1:18885227-18885246 None:intergenic 20.0%
!!! ATTGTATTTTACTTGGATTT+CGG + chr8_1:18885248-18885267 Msa1183610:intron 20.0%
!! CTTTGTGATATGAAAATTAA+TGG + chr8_1:18885274-18885293 Msa1183610:intron 20.0%
!!! AATAAGTTGAAAATATCCTA+TGG + chr8_1:18885506-18885525 Msa1183610:intron 20.0%
!!! ATAAGTTGAAAATATCCTAT+GGG + chr8_1:18885507-18885526 Msa1183610:intron 20.0%
!! CAAGATATATATAGAGATTT+AGG + chr8_1:18885870-18885889 Msa1183610:CDS 20.0%
!! ATATATAGAGATTTAGGAAA+TGG + chr8_1:18885876-18885895 Msa1183610:CDS 20.0%
!!! AGTATAAACTATAGACTTTT+GGG - chr8_1:18886365-18886384 None:intergenic 20.0%
!! TAGATAATATCCTTATTGTT+AGG - chr8_1:18886653-18886672 None:intergenic 20.0%
!! TCCTCATATATAATATATGT+TGG - chr8_1:18887052-18887071 None:intergenic 20.0%
!! AACATATATTATATATGAGG+AGG + chr8_1:18887051-18887070 Msa1183610:intron 20.0%
!! AAGTGATATTGTAGTAAATA+TGG - chr8_1:18887179-18887198 None:intergenic 20.0%
!!! AGATACCTTATTTTAAGTAA+AGG + chr8_1:18887229-18887248 Msa1183610:intron 20.0%
!!! GATACCTTATTTTAAGTAAA+GGG + chr8_1:18887230-18887249 Msa1183610:intron 20.0%
!! TTATCCCTTTACTTAAAATA+AGG - chr8_1:18887237-18887256 None:intergenic 20.0%
!!! TCTTTCAAGAATTTTAAATG+TGG + chr8_1:18887596-18887615 Msa1183610:intron 20.0%
!!! AATTCAAAAAGTGCAAAAAT+AGG + chr8_1:18887691-18887710 Msa1183610:intron 20.0%
!!! ATTCAAAAAGTGCAAAAATA+GGG + chr8_1:18887692-18887711 Msa1183610:intron 20.0%
!! TATACTATTACTAATGCATT+TGG + chr8_1:18887949-18887968 Msa1183610:intron 20.0%
!! ATGAAGAGATATTTGTAAAA+CGG - chr8_1:18888264-18888283 None:intergenic 20.0%
!! TATTGCAATTCTACATATAT+AGG + chr8_1:18888511-18888530 Msa1183610:intron 20.0%
!! TCAAAATAAACTAAACTAGA+TGG + chr8_1:18888597-18888616 Msa1183610:intron 20.0%
!!! TATCCTTCAAGTTTTTAATT+AGG + chr8_1:18888740-18888759 Msa1183610:intron 20.0%
!!! ATCCTTCAAGTTTTTAATTA+GGG + chr8_1:18888741-18888760 Msa1183610:intron 20.0%
!! TGTTTGTATTAGAATGTATT+TGG + chr8_1:18888845-18888864 Msa1183610:intron 20.0%
!!! CATAATTGCTATAAATGTTT+TGG + chr8_1:18888936-18888955 Msa1183610:intron 20.0%
!!! TAGAATTTTGGTAAAACAAT+TGG + chr8_1:18888961-18888980 Msa1183610:intron 20.0%
!!! AGAATTTTGGTAAAACAATT+GGG + chr8_1:18888962-18888981 Msa1183610:intron 20.0%
!!! TTAATTAACGGATATATGAT+TGG + chr8_1:18889088-18889107 Msa1183610:intron 20.0%
!! CTGATCAATTCAATTAATAT+AGG + chr8_1:18889220-18889239 Msa1183610:intron 20.0%
!! TCAAAAGTTTAGTAGTAAAT+TGG - chr8_1:18889726-18889745 None:intergenic 20.0%
!!! TTTGATAGTAACTAAAATGA+TGG + chr8_1:18889741-18889760 Msa1183610:intron 20.0%
!!! GAATAGATTTCTAAAATGAA+TGG - chr8_1:18889791-18889810 None:intergenic 20.0%
!! GTTCATTATACAAAATGTTA+GGG + chr8_1:18889981-18890000 Msa1183610:intron 20.0%
!!! TCTGATTAATTTCATTGATT+AGG + chr8_1:18890096-18890115 Msa1183610:intron 20.0%
!!! CTGATTAATTTCATTGATTA+GGG + chr8_1:18890097-18890116 Msa1183610:intron 20.0%
!!! GTTGTTTTTTTTAAAATGCA+AGG + chr8_1:18890297-18890316 Msa1183610:intron 20.0%
!!! AATTCTTTTGCATTACATTT+GGG - chr8_1:18890413-18890432 None:intergenic 20.0%
!!! TAATTCTTTTGCATTACATT+TGG - chr8_1:18890414-18890433 None:intergenic 20.0%
!!! AATATGCAATTGATTTGTAA+TGG + chr8_1:18890965-18890984 Msa1183610:intron 20.0%
!!! ATATGCAATTGATTTGTAAT+GGG + chr8_1:18890966-18890985 Msa1183610:intron 20.0%
!!! TAATAACAAATTTGTTGAAG+CGG + chr8_1:18891538-18891557 Msa1183610:intron 20.0%
!! AATCTTGTTAAAGAAATTTC+CGG + chr8_1:18891628-18891647 Msa1183610:CDS 20.0%
!!! TGCAATTAATCAAAATTTTG+AGG + chr8_1:18891861-18891880 Msa1183610:intron 20.0%
!!! AATTAATCAAAATTTTGAGG+TGG + chr8_1:18891864-18891883 Msa1183610:intron 20.0%
!!! TGAAATTTTCTGTTATCAAT+TGG + chr8_1:18892238-18892257 Msa1183610:intron 20.0%
!! TAAAGATAATATCTAGAAAC+AGG - chr8_1:18892366-18892385 None:intergenic 20.0%
!! AATGTAATCTTAGTAAATGA+AGG - chr8_1:18893102-18893121 None:intergenic 20.0%
!! GAAATAGTAAATAATGATGA+TGG - chr8_1:18893277-18893296 None:intergenic 20.0%
!! AATATTATAACATAACCTAG+AGG - chr8_1:18893456-18893475 None:intergenic 20.0%
! GAATGAAATTGTTCATCAAT+GGG - chr8_1:18884883-18884902 None:intergenic 25.0%
! TGAATGAAATTGTTCATCAA+TGG - chr8_1:18884884-18884903 None:intergenic 25.0%
!! AAGCTTCGAAATTTTCTTTT+TGG + chr8_1:18885176-18885195 Msa1183610:intron 25.0%
!! GTCAATCCAAATTTTCAAAT+AGG + chr8_1:18885584-18885603 Msa1183610:intron 25.0%
!!! TTTTGTTGTGTTTTTGTCAA+AGG + chr8_1:18885678-18885697 Msa1183610:intron 25.0%
!!! TTTGTTGTGTTTTTGTCAAA+GGG + chr8_1:18885679-18885698 Msa1183610:intron 25.0%
! TTGTCAAAGGGATAAATTAA+TGG + chr8_1:18885691-18885710 Msa1183610:intron 25.0%
! ACAAATATACAAAACAGAGT+TGG - chr8_1:18885773-18885792 None:intergenic 25.0%
!! ACTCTGTTTTGTATATTTGT+AGG + chr8_1:18885773-18885792 Msa1183610:intron 25.0%
!!! TTCTTTAGGATAAATGTTGT+TGG + chr8_1:18886080-18886099 Msa1183610:intron 25.0%
! GGAAGTTATATATGTTCTTT+AGG + chr8_1:18886114-18886133 Msa1183610:intron 25.0%
!!! TTCTTTAGGATAAATGTTGT+TGG + chr8_1:18886080-18886099 Msa1183610:intron 25.0%
!! CAGTATAAACTATAGACTTT+TGG - chr8_1:18886366-18886385 None:intergenic 25.0%
! CAAAAGTCTATAGTTTATAC+TGG + chr8_1:18886364-18886383 Msa1183610:intron 25.0%
! AGAGTTAGTATTTATCAAGT+TGG - chr8_1:18886564-18886583 None:intergenic 25.0%
! AACAAAAAGTCCTAACAATA+AGG + chr8_1:18886640-18886659 Msa1183610:intron 25.0%
!! AAATCTTATTAAGTTGCCAA+AGG - chr8_1:18886969-18886988 None:intergenic 25.0%
! GCCAACATATATTATATATG+AGG + chr8_1:18887048-18887067 Msa1183610:intron 25.0%
! TACAATACACCAAAAATAGT+GGG + chr8_1:18887476-18887495 Msa1183610:intron 25.0%
!! TTCAAAAAGTGCAAAAATAG+GGG + chr8_1:18887693-18887712 Msa1183610:intron 25.0%
! AGACAATAAATAACATGAGA+AGG - chr8_1:18887758-18887777 None:intergenic 25.0%
!! TCATGTTATTTATTGTCTTC+AGG + chr8_1:18887760-18887779 Msa1183610:intron 25.0%
!! CATGTTATTTATTGTCTTCA+GGG + chr8_1:18887761-18887780 Msa1183610:intron 25.0%
!! ATGTTATTTATTGTCTTCAG+GGG + chr8_1:18887762-18887781 Msa1183610:intron 25.0%
!!! CTACCTTATTCTATTTTTGT+TGG + chr8_1:18888031-18888050 Msa1183610:intron 25.0%
! GAAAAAGTAAGAAAGAACAA+GGG - chr8_1:18888069-18888088 None:intergenic 25.0%
! TGAAAAAGTAAGAAAGAACA+AGG - chr8_1:18888070-18888089 None:intergenic 25.0%
! ATGTTAAAAAGAATGACAGA+TGG - chr8_1:18888110-18888129 None:intergenic 25.0%
! TGAAGAGATATTTGTAAAAC+GGG - chr8_1:18888263-18888282 None:intergenic 25.0%
! GTTTAGAAAATAAACTACCT+TGG - chr8_1:18888363-18888382 None:intergenic 25.0%
! TTCTAAACTTTATCTGCTTA+AGG + chr8_1:18888375-18888394 Msa1183610:intron 25.0%
!! ACAATCTAAAACAATAGTCT+AGG + chr8_1:18888457-18888476 Msa1183610:intron 25.0%
! AAACTCAATGAATAACAAGT+AGG + chr8_1:18888484-18888503 Msa1183610:intron 25.0%
!!! AATGTTTTGGAGTAGAATTT+TGG + chr8_1:18888949-18888968 Msa1183610:intron 25.0%
! ATCTTTATCTTGTTACTGTA+AGG + chr8_1:18889041-18889060 Msa1183610:intron 25.0%
!!! GATATTTTAACAGACTAGTT+TGG + chr8_1:18889455-18889474 Msa1183610:intron 25.0%
! TTAACAAAAATAGTAACAGG+TGG - chr8_1:18889591-18889610 None:intergenic 25.0%
! GGTTCATTATACAAAATGTT+AGG + chr8_1:18889980-18889999 Msa1183610:intron 25.0%
!! TATCTTATTTAGCAAGGATT+AGG + chr8_1:18890345-18890364 Msa1183610:intron 25.0%
!! ATCTTATTTAGCAAGGATTA+GGG + chr8_1:18890346-18890365 Msa1183610:intron 25.0%
!! ATAGAAAATGAAGTTTTCCT+TGG - chr8_1:18890513-18890532 None:intergenic 25.0%
!! TTAAAGTTTTTCTTTATGGC+AGG + chr8_1:18890674-18890693 Msa1183610:intron 25.0%
!! TTTGAAAAAGTATACGAGAT+TGG + chr8_1:18890705-18890724 Msa1183610:CDS 25.0%
! CAAATCAATTGCATATTTGT+AGG - chr8_1:18890962-18890981 None:intergenic 25.0%
!!! AATTGATTTGTAATGGGAAA+GGG + chr8_1:18890972-18890991 Msa1183610:intron 25.0%
! TCCCAAGATCAAATAAAAAA+CGG + chr8_1:18891066-18891085 Msa1183610:intron 25.0%
!!! ACCGTTTTTTATTTGATCTT+GGG - chr8_1:18891070-18891089 None:intergenic 25.0%
!!! AACCGTTTTTTATTTGATCT+TGG - chr8_1:18891071-18891090 None:intergenic 25.0%
!!! AATAACAAATTTGTTGAAGC+GGG + chr8_1:18891539-18891558 Msa1183610:intron 25.0%
! ATCTTGTTAAAGAAATTTCC+GGG + chr8_1:18891629-18891648 Msa1183610:CDS 25.0%
! GTAAAAAATGTTGCCAAAAA+GGG - chr8_1:18891908-18891927 None:intergenic 25.0%
! TGTAAAAAATGTTGCCAAAA+AGG - chr8_1:18891909-18891928 None:intergenic 25.0%
! AAATTTCAACTTCAATGGAA+TGG - chr8_1:18892226-18892245 None:intergenic 25.0%
! ACAGAAAATTTCAACTTCAA+TGG - chr8_1:18892231-18892250 None:intergenic 25.0%
! TAATCAATTCATATTGTTCC+TGG + chr8_1:18892298-18892317 Msa1183610:intron 25.0%
! AACAAAAAAGTAGTGAACAA+TGG - chr8_1:18892334-18892353 None:intergenic 25.0%
! AAAAGAAGGAATAGAAAATG+AGG + chr8_1:18892943-18892962 Msa1183610:CDS 25.0%
! TAAATGAAGGTTAAAAGGAA+GGG - chr8_1:18893089-18893108 None:intergenic 25.0%
! CTTAGTAAATGAAGGTTAAA+AGG - chr8_1:18893094-18893113 None:intergenic 25.0%
! TGAATTATTTGTATACCACA+TGG + chr8_1:18893339-18893358 Msa1183610:three_prime_UTR 25.0%
!!! TCTTGGCTTAATTATTTTGA+TGG + chr8_1:18893428-18893447 Msa1183610:three_prime_UTR 25.0%
GATAGAAAGGAAAAAAATGG+TGG + chr8_1:18884826-18884845 Msa1183610:exon 30.0%
AGTCCCAAAGAATGATAATT+GGG - chr8_1:18885611-18885630 None:intergenic 30.0%
TAGTCCCAAAGAATGATAAT+TGG - chr8_1:18885612-18885631 None:intergenic 30.0%
GAATGATCATGTATCTATTG+CGG + chr8_1:18885917-18885936 Msa1183610:CDS 30.0%
AATGATCATGTATCTATTGC+GGG + chr8_1:18885918-18885937 Msa1183610:CDS 30.0%
! ATGTTGTTGGTAGATTCTAA+TGG + chr8_1:18886093-18886112 Msa1183610:intron 30.0%
! ATGTTGTTGGTAGATTCTAA+CGG + chr8_1:18886093-18886112 Msa1183610:intron 30.0%
! TTGAAGGCATATGTTGATAT+TGG + chr8_1:18886227-18886246 Msa1183610:CDS 30.0%
! GTTGATATTGGTGATATACT+AGG + chr8_1:18886239-18886258 Msa1183610:CDS 30.0%
!! AAAAGGTATTACCTAGGAAT+TGG + chr8_1:18886289-18886308 Msa1183610:intron 30.0%
!!! TACCTAGGAATTGGTTTTTT+CGG + chr8_1:18886298-18886317 Msa1183610:intron 30.0%
! TTAGTGAAGATGAGAGTTTT+GGG + chr8_1:18886590-18886609 Msa1183610:intron 30.0%
! TTTTCTTCTTTTTGTGCCTT+TGG + chr8_1:18886950-18886969 Msa1183610:intron 30.0%
TCAAATATAGAATCGTGAAG+AGG + chr8_1:18886988-18887007 Msa1183610:intron 30.0%
!!! GTTTTTGAGTTGTATATCCT+TGG - chr8_1:18887154-18887173 None:intergenic 30.0%
TGAATGAGGACAAATTAAGT+TGG + chr8_1:18887328-18887347 Msa1183610:intron 30.0%
AAGATTAACTGTACTCAATG+AGG + chr8_1:18887351-18887370 Msa1183610:intron 30.0%
AGATTAACTGTACTCAATGA+GGG + chr8_1:18887352-18887371 Msa1183610:intron 30.0%
GTACAATACACCAAAAATAG+TGG + chr8_1:18887475-18887494 Msa1183610:intron 30.0%
AATAAAAAAAAAGGGCAACC+CGG - chr8_1:18887542-18887561 None:intergenic 30.0%
TACAGTGTGTAAAAAGTGAA+AGG - chr8_1:18887662-18887681 None:intergenic 30.0%
! TCAAAAAGTGCAAAAATAGG+GGG + chr8_1:18887694-18887713 Msa1183610:intron 30.0%
CAATAAATAACATGAGAAGG+TGG - chr8_1:18887755-18887774 None:intergenic 30.0%
AGCAATGATAACAAGCAAAA+GGG - chr8_1:18887925-18887944 None:intergenic 30.0%
GCTCCAACAAAAATAGAATA+AGG - chr8_1:18888037-18888056 None:intergenic 30.0%
!!! CTTTCTTACTTTTTCATCTC+TGG + chr8_1:18888074-18888093 Msa1183610:intron 30.0%
CACCCTAATTAAAAACTTGA+AGG - chr8_1:18888746-18888765 None:intergenic 30.0%
GAATGTATTTGGTCATCAAT+AGG + chr8_1:18888856-18888875 Msa1183610:intron 30.0%
GCTTGTATGCTGTTAATTAA+CGG + chr8_1:18889076-18889095 Msa1183610:intron 30.0%
ACAGATAGTAGATAAATGCT+TGG - chr8_1:18889191-18889210 None:intergenic 30.0%
TATAGGTTGTATCAGAGATA+CGG + chr8_1:18889237-18889256 Msa1183610:intron 30.0%
CTACAAAGACAAAATTGTGT+AGG - chr8_1:18889334-18889353 None:intergenic 30.0%
! CTACACAATTTTGTCTTTGT+AGG + chr8_1:18889332-18889351 Msa1183610:intron 30.0%
!!! TTTTAACAGACTAGTTTGGT+AGG + chr8_1:18889459-18889478 Msa1183610:intron 30.0%
CTTGAAAGTCAGATTGATAT+AGG + chr8_1:18889534-18889553 Msa1183610:intron 30.0%
AAAACAATGAAGGCAAAAAG+AGG - chr8_1:18889683-18889702 None:intergenic 30.0%
GAGTCAAACAAAAACAATGA+AGG - chr8_1:18889693-18889712 None:intergenic 30.0%
!!! ATTGTTTTTGTTTGACTCCT+TGG + chr8_1:18889695-18889714 Msa1183610:intron 30.0%
GCGAACATTAAAAAACAACA+AGG - chr8_1:18889818-18889837 None:intergenic 30.0%
TAATTGCATTGCTCAATAGA+AGG - chr8_1:18889898-18889917 None:intergenic 30.0%
GTGAATCTGGAAACATTATA+TGG - chr8_1:18890016-18890035 None:intergenic 30.0%
TAAAATGCAAGGAAATGTTG+AGG + chr8_1:18890308-18890327 Msa1183610:intron 30.0%
! AAAATGAAGTTTTCCTTGGA+AGG - chr8_1:18890509-18890528 None:intergenic 30.0%
!! ACACAGGTTTTTCAAAAAGT+TGG - chr8_1:18890571-18890590 None:intergenic 30.0%
CAATCTCAAACTATTACTAG+AGG - chr8_1:18890610-18890629 None:intergenic 30.0%
GGTCGAATATTTAGAAATGA+AGG + chr8_1:18890726-18890745 Msa1183610:CDS 30.0%
AATATCAACTCGTCATAATC+CGG + chr8_1:18890749-18890768 Msa1183610:CDS 30.0%
ACCTCTATAGTTGTAAATTC+CGG - chr8_1:18890771-18890790 None:intergenic 30.0%
!! CAATTGATTTGTAATGGGAA+AGG + chr8_1:18890971-18890990 Msa1183610:intron 30.0%
CAAATAAAAAACGGTTGTTC+AGG + chr8_1:18891075-18891094 Msa1183610:intron 30.0%
GATTTGAAAAAGTTTCACGA+CGG - chr8_1:18891119-18891138 None:intergenic 30.0%
!! GACAATTGTTGATTCACATT+AGG - chr8_1:18891141-18891160 None:intergenic 30.0%
!!! GTTAGTTTTAGTACTTGAGA+CGG + chr8_1:18891187-18891206 Msa1183610:intron 30.0%
!!! TTAGTTTTAGTACTTGAGAC+GGG + chr8_1:18891188-18891207 Msa1183610:intron 30.0%
! AAAGCTTACTGTTGATTATC+AGG + chr8_1:18891457-18891476 Msa1183610:CDS 30.0%
! TAGAAGACTGTTGAAGTTTT+AGG - chr8_1:18891502-18891521 None:intergenic 30.0%
TTCTTTAACAAGATTGTGCA+TGG - chr8_1:18891623-18891642 None:intergenic 30.0%
GTTATCAAGATTCTTTCCAA+GGG - chr8_1:18891713-18891732 None:intergenic 30.0%
TGTTATCAAGATTCTTTCCA+AGG - chr8_1:18891714-18891733 None:intergenic 30.0%
! TGGAAAGAATCTTGATAACA+AGG + chr8_1:18891714-18891733 Msa1183610:CDS 30.0%
! TACATATTGACATCCCTTTT+TGG + chr8_1:18891892-18891911 Msa1183610:intron 30.0%
! AGTCTAAAACAAATGTAGGT+TGG - chr8_1:18892024-18892043 None:intergenic 30.0%
TGTATGGTACTTTCTACTTT+AGG - chr8_1:18892164-18892183 None:intergenic 30.0%
!! GTAGAAAGTACCATACAATT+TGG + chr8_1:18892167-18892186 Msa1183610:intron 30.0%
TGTAAGAGATCCAAATTGTA+TGG - chr8_1:18892180-18892199 None:intergenic 30.0%
AATGAAAAGTTCAAACCTCT+CGG - chr8_1:18892427-18892446 None:intergenic 30.0%
! AGGTTTGAACTTTTCATTTG+TGG + chr8_1:18892429-18892448 Msa1183610:CDS 30.0%
! TTGAACTTTTCATTTGTGGT+CGG + chr8_1:18892433-18892452 Msa1183610:CDS 30.0%
!!! AACACATCGTTTTTAGTTTG+TGG - chr8_1:18892559-18892578 None:intergenic 30.0%
ATTTCTCATCGTATACAACA+TGG + chr8_1:18892590-18892609 Msa1183610:intron 30.0%
TTTCTCATCGTATACAACAT+GGG + chr8_1:18892591-18892610 Msa1183610:intron 30.0%
AAAAAGAAAAAAACCCTGGT+AGG + chr8_1:18892614-18892633 Msa1183610:intron 30.0%
TAACACCTTAACAAGATAGA+TGG + chr8_1:18892749-18892768 Msa1183610:intron 30.0%
!!! TGGTTGCATTTTTTTTTACC+TGG + chr8_1:18892846-18892865 Msa1183610:intron 30.0%
GTTGTCTAATTTGATCTTCT+AGG - chr8_1:18892883-18892902 None:intergenic 30.0%
ACAAATGGTGGTAAAAAAGA+AGG + chr8_1:18892929-18892948 Msa1183610:CDS 30.0%
AAATGAAGGTTAAAAGGAAG+GGG - chr8_1:18893088-18893107 None:intergenic 30.0%
GTAAATGAAGGTTAAAAGGA+AGG - chr8_1:18893090-18893109 None:intergenic 30.0%
ACTAAGATTACATTCTTTCC+AGG + chr8_1:18893108-18893127 Msa1183610:intron 30.0%
CTAAGATTACATTCTTTCCA+GGG + chr8_1:18893109-18893128 Msa1183610:intron 30.0%
TAAGATTACATTCTTTCCAG+GGG + chr8_1:18893110-18893129 Msa1183610:intron 30.0%
AACAAAACTGTCCTTATTGT+TGG - chr8_1:18893216-18893235 None:intergenic 30.0%
ATGCTTAATCAAATTCCATG+TGG - chr8_1:18893357-18893376 None:intergenic 30.0%
!! AAAGAGCATCATGAATTCAA+AGG + chr8_1:18893397-18893416 Msa1183610:three_prime_UTR 30.0%
ATTCAAAGGTTATCTTGTCT+TGG + chr8_1:18893411-18893430 Msa1183610:three_prime_UTR 30.0%
!!! ATTATTTTGATGGTTCCTCT+AGG + chr8_1:18893438-18893457 Msa1183610:three_prime_UTR 30.0%
AAAAAGAGATATGTAAGCGG+AGG + chr8_1:18884782-18884801 Msa1183610:five_prime_UTR 35.0%
CTGATACTCGATAGATAGAA+AGG + chr8_1:18884813-18884832 Msa1183610:five_prime_UTR 35.0%
AGAAAGGAAAAAAATGGTGG+AGG + chr8_1:18884829-18884848 Msa1183610:exon 35.0%
TGAAACTGTTGAACCTAACA+TGG + chr8_1:18884855-18884874 Msa1183610:CDS 35.0%
TCGCTGAATAACTTCAATGT+TGG + chr8_1:18885105-18885124 Msa1183610:intron 35.0%
GCAATGTAGGAGCAAAAATA+CGG - chr8_1:18885214-18885233 None:intergenic 35.0%
CTTATGATCGAATGTGTATC+CGG - chr8_1:18885330-18885349 None:intergenic 35.0%
ACACATTCGATCATAAGTGT+CGG + chr8_1:18885333-18885352 Msa1183610:intron 35.0%
!! GCTGTTTTCATAAGCTATTC+TGG + chr8_1:18885471-18885490 Msa1183610:intron 35.0%
TTGGGGCCTATTTGAAAATT+TGG - chr8_1:18885593-18885612 None:intergenic 35.0%
GTCCCAAAGAATGATAATTG+GGG - chr8_1:18885610-18885629 None:intergenic 35.0%
GTTGAAGAACTTAGAAGCAA+GGG + chr8_1:18885795-18885814 Msa1183610:CDS 35.0%
TTGAAGAACTTAGAAGCAAG+GGG + chr8_1:18885796-18885815 Msa1183610:CDS 35.0%
TTGTTCCACTCATAAGCATA+GGG - chr8_1:18885828-18885847 None:intergenic 35.0%
TTTGTTCCACTCATAAGCAT+AGG - chr8_1:18885829-18885848 None:intergenic 35.0%
ATCGTCTCTTAGTGTCAAAA+AGG - chr8_1:18885979-18885998 None:intergenic 35.0%
AAGAGGAACAATTAAACGCA+CGG + chr8_1:18886265-18886284 Msa1183610:CDS 35.0%
ACAATTAAACGCACGGAAAA+AGG + chr8_1:18886272-18886291 Msa1183610:CDS 35.0%
TACCGAAAAAACCAATTCCT+AGG - chr8_1:18886303-18886322 None:intergenic 35.0%
!!! GACTTCGTTTTTTTACATGG+CGG - chr8_1:18886413-18886432 None:intergenic 35.0%
!!! CCAGACTTCGTTTTTTTACA+TGG - chr8_1:18886416-18886435 None:intergenic 35.0%
CCATGTAAAAAAACGAAGTC+TGG + chr8_1:18886413-18886432 Msa1183610:intron 35.0%
GAGGAATTCACACAAATCAT+TGG - chr8_1:18886451-18886470 None:intergenic 35.0%
! CTTAGTGAAGATGAGAGTTT+TGG + chr8_1:18886589-18886608 Msa1183610:intron 35.0%
! AAGATCCATTTGGGCTTTAA+GGG - chr8_1:18886858-18886877 None:intergenic 35.0%
TCTTAACCTCTTGTGAAAGT+TGG + chr8_1:18886913-18886932 Msa1183610:intron 35.0%
ACATTGAATTCACCAATCCA+AGG + chr8_1:18887134-18887153 Msa1183610:intron 35.0%
TGAGTTGTATATCCTTGGAT+TGG - chr8_1:18887149-18887168 None:intergenic 35.0%
! GAGTGGATTTCTAGATTTCT+TGG - chr8_1:18887305-18887324 None:intergenic 35.0%
GAAATCCACTCTAATGAATG+AGG + chr8_1:18887314-18887333 Msa1183610:intron 35.0%
TTTGTCCTCATTCATTAGAG+TGG - chr8_1:18887322-18887341 None:intergenic 35.0%
GATTAACTGTACTCAATGAG+GGG + chr8_1:18887353-18887372 Msa1183610:intron 35.0%
TAAAGTTGTTGTCATGTGAC+TGG + chr8_1:18887394-18887413 Msa1183610:intron 35.0%
! TTACCCTCTTTTTACACAAG+AGG - chr8_1:18887449-18887468 None:intergenic 35.0%
TCTTGTGTAAAAAGAGGGTA+AGG + chr8_1:18887448-18887467 Msa1183610:intron 35.0%
!! ATGTTTGACTTGCATCTTTG+TGG + chr8_1:18887573-18887592 Msa1183610:intron 35.0%
! CAAAAAGTGCAAAAATAGGG+GGG + chr8_1:18887695-18887714 Msa1183610:intron 35.0%
! GTGGAAGCAAAGATTTTGTA+AGG - chr8_1:18887819-18887838 None:intergenic 35.0%
GGGACACAAATACAATATTG+AGG - chr8_1:18887905-18887924 None:intergenic 35.0%
CAGCAATGATAACAAGCAAA+AGG - chr8_1:18887926-18887945 None:intergenic 35.0%
! CTATCCAATTTTCAGTCCAA+GGG - chr8_1:18888240-18888259 None:intergenic 35.0%
AGATATGATTGCAAATCCAG+AGG + chr8_1:18888313-18888332 Msa1183610:CDS 35.0%
! AGAAACTGCTAGACATTTTC+TGG - chr8_1:18888556-18888575 None:intergenic 35.0%
TAATAGCAAAGATTTAGCGC+AGG - chr8_1:18888714-18888733 None:intergenic 35.0%
GGTATGTGCTAATTACCTTT+GGG + chr8_1:18888983-18889002 Msa1183610:intron 35.0%
AGTAGATAAATGCTTGGTCA+TGG - chr8_1:18889185-18889204 None:intergenic 35.0%
! TTTGTAGGAGAAGTACATGT+AGG + chr8_1:18889347-18889366 Msa1183610:intron 35.0%
! TTGTAGGAGAAGTACATGTA+GGG + chr8_1:18889348-18889367 Msa1183610:intron 35.0%
CATATTTATGCAATGCTCTC+TGG + chr8_1:18889507-18889526 Msa1183610:intron 35.0%
!! GTAGTAAATTGGTAATGCCA+AGG - chr8_1:18889715-18889734 None:intergenic 35.0%
TTGTCAAAGCTGTAACTAGA+TGG + chr8_1:18889926-18889945 Msa1183610:intron 35.0%
TATACAGTACTTCGTTCCTA+AGG - chr8_1:18889952-18889971 None:intergenic 35.0%
!! GAACGAAGTACTGTATAACT+AGG + chr8_1:18889955-18889974 Msa1183610:intron 35.0%
ATGGATATTCAGAGTGAATC+TGG - chr8_1:18890029-18890048 None:intergenic 35.0%
! ATACACTTGCATTTTGCACA+TGG + chr8_1:18890059-18890078 Msa1183610:intron 35.0%
TGCTATATTCATCACGAGTA+AGG + chr8_1:18890375-18890394 Msa1183610:intron 35.0%
AAAAACCTGTGTCTTGATCA+CGG + chr8_1:18890579-18890598 Msa1183610:intron 35.0%
! AAGTTTTTCTTTATGGCAGG+TGG + chr8_1:18890677-18890696 Msa1183610:intron 35.0%
! AGTTTTTCTTTATGGCAGGT+GGG + chr8_1:18890678-18890697 Msa1183610:intron 35.0%
TCCGGAATTTACAACTATAG+AGG + chr8_1:18890767-18890786 Msa1183610:CDS 35.0%
! ATTAGTCTCTTGCAAATGCA+AGG + chr8_1:18890928-18890947 Msa1183610:intron 35.0%
TGGCAACAAAGCATAAAAGA+GGG - chr8_1:18891030-18891049 None:intergenic 35.0%
TTGGCAACAAAGCATAAAAG+AGG - chr8_1:18891031-18891050 None:intergenic 35.0%
GGGATTAGATATGTGAAGAT+TGG - chr8_1:18891050-18891069 None:intergenic 35.0%
CTGCTAAATTCATCATGCTT+TGG - chr8_1:18891400-18891419 None:intergenic 35.0%
AAGCATGATGAATTTAGCAG+AGG + chr8_1:18891400-18891419 Msa1183610:CDS 35.0%
GAGTTGAGATATGTTTGGAA+AGG + chr8_1:18891581-18891600 Msa1183610:CDS 35.0%
CAATTCATTGAAATCGATCC+CGG - chr8_1:18891650-18891669 None:intergenic 35.0%
! GGGATCGATTTCAATGAATT+GGG + chr8_1:18891649-18891668 Msa1183610:CDS 35.0%
! GGGTAGTCTAAAACAAATGT+AGG - chr8_1:18892028-18892047 None:intergenic 35.0%
CCAATGGAGATATCTCAATT+GGG - chr8_1:18892048-18892067 None:intergenic 35.0%
! GTCTAAAATGTGTATACCTG+CGG - chr8_1:18892081-18892100 None:intergenic 35.0%
! ACTTTTGCGATGAAAACAAG+GGG - chr8_1:18892269-18892288 None:intergenic 35.0%
! GACTTTTGCGATGAAAACAA+GGG - chr8_1:18892270-18892289 None:intergenic 35.0%
! TGACTTTTGCGATGAAAACA+AGG - chr8_1:18892271-18892290 None:intergenic 35.0%
AACAATGGTGATCAAAATCC+AGG - chr8_1:18892319-18892338 None:intergenic 35.0%
! TGAACTTTTCATTTGTGGTC+GGG + chr8_1:18892434-18892453 Msa1183610:CDS 35.0%
ATTGACTGATCCTATAGATC+AGG + chr8_1:18892479-18892498 Msa1183610:CDS 35.0%
! CTTCCAAACTTTTCACATTC+AGG + chr8_1:18892506-18892525 Msa1183610:intron 35.0%
ATGCCTGAATGTGAAAAGTT+TGG - chr8_1:18892512-18892531 None:intergenic 35.0%
TGGGAAAAAGAAAAAAACCC+TGG + chr8_1:18892610-18892629 Msa1183610:intron 35.0%
CTTATATTCATCTCCTACCA+GGG - chr8_1:18892630-18892649 None:intergenic 35.0%
TCTTATATTCATCTCCTACC+AGG - chr8_1:18892631-18892650 None:intergenic 35.0%
TAGTTTGACGGTGAACAAAA+TGG + chr8_1:18892826-18892845 Msa1183610:intron 35.0%
AAAGCAGCTCTTTCAACAAA+TGG + chr8_1:18892914-18892933 Msa1183610:CDS 35.0%
TCTTGACGATGATTTCCTAA+CGG + chr8_1:18892985-18893004 Msa1183610:CDS 35.0%
TCTGTTTGCATGTCTTTGTT+TGG + chr8_1:18893051-18893070 Msa1183610:intron 35.0%
AATGAAGGTTAAAAGGAAGG+GGG - chr8_1:18893087-18893106 None:intergenic 35.0%
GCTATTACATCTCTAATGCT+GGG - chr8_1:18893175-18893194 None:intergenic 35.0%
TCATGATGCTCTTTCAACTA+AGG - chr8_1:18893391-18893410 None:intergenic 35.0%
! TCATCAATGGGTTCCATGTT+AGG - chr8_1:18884871-18884890 None:intergenic 40.0%
TTGAATAAGAAGAAGAGGCG+CGG - chr8_1:18884940-18884959 None:intergenic 40.0%
GGTGGTTGAATAAGAAGAAG+AGG - chr8_1:18884945-18884964 None:intergenic 40.0%
ATACCATAAGCGCTTAATCG+TGG - chr8_1:18885361-18885380 None:intergenic 40.0%
TATCCTATGGGCATGTTCAT+AGG + chr8_1:18885519-18885538 Msa1183610:intron 40.0%
AGGCCCCAATTATCATTCTT+TGG + chr8_1:18885604-18885623 Msa1183610:intron 40.0%
GGCCCCAATTATCATTCTTT+GGG + chr8_1:18885605-18885624 Msa1183610:intron 40.0%
!! TATCATTCTTTGGGACTAGC+TGG + chr8_1:18885614-18885633 Msa1183610:intron 40.0%
GCTGGAACTTTCTCTGATTA+TGG + chr8_1:18885632-18885651 Msa1183610:intron 40.0%
GGTTGAAGAACTTAGAAGCA+AGG + chr8_1:18885794-18885813 Msa1183610:intron 40.0%
!! ATTGTTGCTAGGAGAGCATT+TGG + chr8_1:18885945-18885964 Msa1183610:CDS 40.0%
TTGACACTAAGAGACGATTC+AGG + chr8_1:18885981-18886000 Msa1183610:CDS 40.0%
TGACACTAAGAGACGATTCA+GGG + chr8_1:18885982-18886001 Msa1183610:CDS 40.0%
GTTTCAGCTCTATTGCGAAA+AGG + chr8_1:18886178-18886197 Msa1183610:intron 40.0%
TGATCAGTTTGAGCAGTTGA+AGG + chr8_1:18886211-18886230 Msa1183610:CDS 40.0%
!! CACGGAAAAAGGTATTACCT+AGG + chr8_1:18886283-18886302 Msa1183610:intron 40.0%
GCGGTAACACAAAAATCAGA+TGG - chr8_1:18886394-18886413 None:intergenic 40.0%
TCTTCAGTTGCAGCAATACT+AGG - chr8_1:18886759-18886778 None:intergenic 40.0%
GTATTGCTGCAACTGAAGAT+TGG + chr8_1:18886760-18886779 Msa1183610:intron 40.0%
CAAGATCCATTTGGGCTTTA+AGG - chr8_1:18886859-18886878 None:intergenic 40.0%
CAACAACCAACTTTCACAAG+AGG - chr8_1:18886922-18886941 None:intergenic 40.0%
CACTCAAAGTGAGTTACTTC+TGG - chr8_1:18887089-18887108 None:intergenic 40.0%
CAGAAGTAACTCACTTTGAG+TGG + chr8_1:18887087-18887106 Msa1183610:intron 40.0%
CACTTGCCTATTATCTGAGA+CGG + chr8_1:18887194-18887213 Msa1183610:intron 40.0%
! ACTTGCCTATTATCTGAGAC+GGG + chr8_1:18887195-18887214 Msa1183610:intron 40.0%
! AATAAGGTATCTCCCTAGAC+TGG - chr8_1:18887221-18887240 None:intergenic 40.0%
ACAGCCTCTTGTGTAAAAAG+AGG + chr8_1:18887442-18887461 Msa1183610:intron 40.0%
CAGCCTCTTGTGTAAAAAGA+GGG + chr8_1:18887443-18887462 Msa1183610:intron 40.0%
CCACTTCCTGACAAATATCA+CGG + chr8_1:18887835-18887854 Msa1183610:CDS 40.0%
GTTAGACCGTGATATTTGTC+AGG - chr8_1:18887844-18887863 None:intergenic 40.0%
GAGATGCTGTAGGAATATGA+AGG - chr8_1:18888202-18888221 None:intergenic 40.0%
ATGATAACTGGAGATGCTGT+AGG - chr8_1:18888212-18888231 None:intergenic 40.0%
! GCTATCCAATTTTCAGTCCA+AGG - chr8_1:18888241-18888260 None:intergenic 40.0%
!! TCATGTTTGCTGTCTACTTG+TGG + chr8_1:18888280-18888299 Msa1183610:intron 40.0%
! TTTGCTGTCTACTTGTGGTT+AGG + chr8_1:18888285-18888304 Msa1183610:intron 40.0%
!! AAACTACCTTGGCTCTTTTG+CGG - chr8_1:18888352-18888371 None:intergenic 40.0%
TGAGGTTGAGATATATGGCA+TGG - chr8_1:18888676-18888695 None:intergenic 40.0%
GGGTATGTGCTAATTACCTT+TGG + chr8_1:18888982-18889001 Msa1183610:intron 40.0%
CTAATTACCTTTGGGCTTTG+AGG + chr8_1:18888991-18889010 Msa1183610:intron 40.0%
AAGAAGAGAATGTGAGGCTA+CGG - chr8_1:18889125-18889144 None:intergenic 40.0%
! GGATTCTTTAGGTTTCGTTG+AGG + chr8_1:18889268-18889287 Msa1183610:CDS 40.0%
AATCCACAAACCTGCAAAAC+TGG - chr8_1:18889302-18889321 None:intergenic 40.0%
ACAATGAAGGCAAAAAGAGG+AGG - chr8_1:18889680-18889699 None:intergenic 40.0%
!! CGAAGTACTGTATAACTAGG+CGG + chr8_1:18889958-18889977 Msa1183610:intron 40.0%
!! GAAGTACTGTATAACTAGGC+GGG + chr8_1:18889959-18889978 Msa1183610:intron 40.0%
CTCTGAATATCCATATACCG+TGG + chr8_1:18890035-18890054 Msa1183610:intron 40.0%
CAAAATGCAAGTGTATGCCA+CGG - chr8_1:18890055-18890074 None:intergenic 40.0%
! TTCATTGATTAGGGAGAAGC+TGG + chr8_1:18890106-18890125 Msa1183610:intron 40.0%
GAATTGTGGTATGTCACGAA+TGG - chr8_1:18890148-18890167 None:intergenic 40.0%
GTGACATACCACAATTCTCT+TGG + chr8_1:18890151-18890170 Msa1183610:CDS 40.0%
AGTCTCTTCCAAGAGAATTG+TGG - chr8_1:18890162-18890181 None:intergenic 40.0%
ATTGCACCTAAAGAGAATGC+TGG + chr8_1:18890204-18890223 Msa1183610:CDS 40.0%
ATCTCACCAGCATTCTCTTT+AGG - chr8_1:18890213-18890232 None:intergenic 40.0%
! TTTTCCTTGGAAGGAAAGGA+TGG - chr8_1:18890500-18890519 None:intergenic 40.0%
! GAAGTTTTCCTTGGAAGGAA+AGG - chr8_1:18890504-18890523 None:intergenic 40.0%
AAAACCTGTGTCTTGATCAC+GGG + chr8_1:18890580-18890599 Msa1183610:intron 40.0%
!!! GTTATTTTGGATATCACGCG+TGG + chr8_1:18890850-18890869 Msa1183610:intron 40.0%
AAAAGTTTCACGACGGTTGT+TGG - chr8_1:18891112-18891131 None:intergenic 40.0%
CCTAAGCCATGAAAAGTTAG+GGG - chr8_1:18891232-18891251 None:intergenic 40.0%
GCCTAAGCCATGAAAAGTTA+GGG - chr8_1:18891233-18891252 None:intergenic 40.0%
AGCCTAAGCCATGAAAAGTT+AGG - chr8_1:18891234-18891253 None:intergenic 40.0%
ACATATCTCAACTCCCTGTA+CGG - chr8_1:18891575-18891594 None:intergenic 40.0%
ACAGGGAGTTGAGATATGTT+TGG + chr8_1:18891576-18891595 Msa1183610:intron 40.0%
! CGGGATCGATTTCAATGAAT+TGG + chr8_1:18891648-18891667 Msa1183610:CDS 40.0%
TGAATTGGGAAATGATCTCG+AGG + chr8_1:18891663-18891682 Msa1183610:CDS 40.0%
AATCAACCTCGTTAAGTAGG+TGG - chr8_1:18891774-18891793 None:intergenic 40.0%
! ACCTACTTAACGAGGTTGAT+TGG + chr8_1:18891773-18891792 Msa1183610:intron 40.0%
! AATGTAGGTTGGATGAGCTT+TGG - chr8_1:18892013-18892032 None:intergenic 40.0%
CCCAATTGAGATATCTCCAT+TGG + chr8_1:18892045-18892064 Msa1183610:CDS 40.0%
GCCAATGGAGATATCTCAAT+TGG - chr8_1:18892049-18892068 None:intergenic 40.0%
TGGAAGCTTACCTGATCTAT+AGG - chr8_1:18892492-18892511 None:intergenic 40.0%
CCATGCCATCTATCTTGTTA+AGG - chr8_1:18892757-18892776 None:intergenic 40.0%
CCTTAACAAGATAGATGGCA+TGG + chr8_1:18892754-18892773 Msa1183610:intron 40.0%
CCAACGTAGCAATAGTTTGA+CGG + chr8_1:18892814-18892833 Msa1183610:intron 40.0%
!!! TTTTTTTTTACCTGGCAGCG+AGG + chr8_1:18892854-18892873 Msa1183610:intron 40.0%
TTATGTACCATTCCAGAAGC+TGG - chr8_1:18893031-18893050 None:intergenic 40.0%
ATGAAGGTTAAAAGGAAGGG+GGG - chr8_1:18893086-18893105 None:intergenic 40.0%
GGCTATTACATCTCTAATGC+TGG - chr8_1:18893176-18893195 None:intergenic 40.0%
ATTGTTGGACCTTGAGTACT+GGG - chr8_1:18893201-18893220 None:intergenic 40.0%
TATTGTTGGACCTTGAGTAC+TGG - chr8_1:18893202-18893221 None:intergenic 40.0%
GTACTCAAGGTCCAACAATA+AGG + chr8_1:18893202-18893221 Msa1183610:CDS 40.0%
!!! AATATTTTGGTGCTCCCACT+TGG + chr8_1:18893470-18893489 Msa1183610:three_prime_UTR 40.0%
!!! ATATTTTGGTGCTCCCACTT+GGG + chr8_1:18893471-18893490 Msa1183610:three_prime_UTR 40.0%
TCTTATTCAACCACCTCCTC+CGG + chr8_1:18884950-18884969 Msa1183610:CDS 45.0%
AAGTACCTTCTTCAAGCGCA+TGG - chr8_1:18885041-18885060 None:intergenic 45.0%
! CGGTTTCTTTGTGTCGATGT+CGG + chr8_1:18885301-18885320 Msa1183610:intron 45.0%
TCGATCCCTATGCTTATGAG+TGG + chr8_1:18885820-18885839 Msa1183610:CDS 45.0%
TTGCGGGAAGAATTGTTGCT+AGG + chr8_1:18885934-18885953 Msa1183610:CDS 45.0%
AGACGATTCAGGGACAATTC+AGG + chr8_1:18885992-18886011 Msa1183610:CDS 45.0%
GGTGATATACTAGGTGCAAG+AGG + chr8_1:18886248-18886267 Msa1183610:CDS 45.0%
CAAAAACAAGGCAGATGCAG+AGG - chr8_1:18886470-18886489 None:intergenic 45.0%
TTGCTGCAACTGAAGATTGG+AGG + chr8_1:18886763-18886782 Msa1183610:intron 45.0%
TTCCACCCTTAAAGCCCAAA+TGG + chr8_1:18886850-18886869 Msa1183610:intron 45.0%
!! ATCCATTTGGGCTTTAAGGG+TGG - chr8_1:18886855-18886874 None:intergenic 45.0%
CCCTAGCACAAGATCCATTT+GGG - chr8_1:18886867-18886886 None:intergenic 45.0%
CCCAAATGGATCTTGTGCTA+GGG + chr8_1:18886864-18886883 Msa1183610:intron 45.0%
CCAAATGGATCTTGTGCTAG+GGG + chr8_1:18886865-18886884 Msa1183610:intron 45.0%
TACTCAATGAGGGGTAACCT+TGG + chr8_1:18887362-18887381 Msa1183610:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG + chr8_1:18887398-18887417 Msa1183610:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr8_1:18887438-18887457 None:intergenic 45.0%
! GGAAAGGGTCCCACTATTTT+TGG - chr8_1:18887488-18887507 None:intergenic 45.0%
! AAAATAGTGGGACCCTTTCC+CGG + chr8_1:18887488-18887507 Msa1183610:intron 45.0%
ACATGAGAAGGTGGTAAAGC+TGG - chr8_1:18887746-18887765 None:intergenic 45.0%
CCGTGATATTTGTCAGGAAG+TGG - chr8_1:18887838-18887857 None:intergenic 45.0%
TAGATATACGCTATCGCCAG+AGG + chr8_1:18887869-18887888 Msa1183610:CDS 45.0%
TTGAGGTACAAGCTTACCTC+TGG - chr8_1:18887888-18887907 None:intergenic 45.0%
CCAAGGGTGAGAATGATAAC+TGG - chr8_1:18888224-18888243 None:intergenic 45.0%
CCAGTTATCATTCTCACCCT+TGG + chr8_1:18888221-18888240 Msa1183610:intron 45.0%
CTCACCCTTGGACTGAAAAT+TGG + chr8_1:18888233-18888252 Msa1183610:intron 45.0%
GTTGAGATATATGGCATGGC+TGG - chr8_1:18888672-18888691 None:intergenic 45.0%
CTGGGTGAGGTTGAGATATA+TGG - chr8_1:18888681-18888700 None:intergenic 45.0%
ATTGCAACCTCAAAGCCCAA+AGG - chr8_1:18889001-18889020 None:intergenic 45.0%
CAGCAGAAGAAGAGAATGTG+AGG - chr8_1:18889131-18889150 None:intergenic 45.0%
AGGTTGTATCAGAGATACGG+AGG + chr8_1:18889240-18889259 Msa1183610:intron 45.0%
ATCAGAGATACGGAGGACAA+TGG + chr8_1:18889247-18889266 Msa1183610:CDS 45.0%
! CGGAGGACAATGGATTCTTT+AGG + chr8_1:18889257-18889276 Msa1183610:CDS 45.0%
! GGTTGAAACTCCAGTTTTGC+AGG + chr8_1:18889289-18889308 Msa1183610:CDS 45.0%
! ACTCCAGTTTTGCAGGTTTG+TGG + chr8_1:18889296-18889315 Msa1183610:intron 45.0%
AGTACATGTAGGGAATCTGC+TGG + chr8_1:18889358-18889377 Msa1183610:intron 45.0%
AAGAGGAGGCAAATTGGTCA+AGG - chr8_1:18889666-18889685 None:intergenic 45.0%
GGCAAAAAGAGGAGGCAAAT+TGG - chr8_1:18889672-18889691 None:intergenic 45.0%
AGCTGTAACTAGATGGCCTT+AGG + chr8_1:18889933-18889952 Msa1183610:intron 45.0%
CAAGTGTATGCCACGGTATA+TGG - chr8_1:18890048-18890067 None:intergenic 45.0%
ATTGATTAGGGAGAAGCTGG+AGG + chr8_1:18890109-18890128 Msa1183610:intron 45.0%
! TGTCACGAATGGTCTAGCTT+CGG - chr8_1:18890137-18890156 None:intergenic 45.0%
GAATCCATCCTTTCCTTCCA+AGG + chr8_1:18890493-18890512 Msa1183610:intron 45.0%
! TTTTCTTTATGGCAGGTGGG+TGG + chr8_1:18890681-18890700 Msa1183610:intron 45.0%
TTTCTTTATGGCAGGTGGGT+GGG + chr8_1:18890682-18890701 Msa1183610:intron 45.0%
AAGGGTTGTGAATCCCACTA+TGG + chr8_1:18890990-18891009 Msa1183610:intron 45.0%
AACCAAGTGCTTGCCATAGT+GGG - chr8_1:18891006-18891025 None:intergenic 45.0%
! TTCCCTCCCCTAACTTTTCA+TGG + chr8_1:18891223-18891242 Msa1183610:intron 45.0%
AGCCATGAAAAGTTAGGGGA+GGG - chr8_1:18891228-18891247 None:intergenic 45.0%
AAGCCATGAAAAGTTAGGGG+AGG - chr8_1:18891229-18891248 None:intergenic 45.0%
! CCCCTAACTTTTCATGGCTT+AGG + chr8_1:18891229-18891248 Msa1183610:intron 45.0%
GGGTGTAATGATTCCGTACA+GGG + chr8_1:18891559-18891578 Msa1183610:intron 45.0%
AGATATGTTTGGAAAGGCCC+TGG + chr8_1:18891587-18891606 Msa1183610:CDS 45.0%
ATTGAAGCATGCCAATCTGC+CGG + chr8_1:18891748-18891767 Msa1183610:CDS 45.0%
GCCAATCAACCTCGTTAAGT+AGG - chr8_1:18891777-18891796 None:intergenic 45.0%
AAATGTGTATACCTGCGGTG+TGG - chr8_1:18892076-18892095 None:intergenic 45.0%
TGATCCTCCATTAGATCCAC+AGG + chr8_1:18892396-18892415 Msa1183610:intron 45.0%
CAAACCTGTGGATCTAATGG+AGG - chr8_1:18892403-18892422 None:intergenic 45.0%
GGTCAAACCTGTGGATCTAA+TGG - chr8_1:18892406-18892425 None:intergenic 45.0%
TTCATTTGTGGTCGGGAACT+AGG + chr8_1:18892441-18892460 Msa1183610:CDS 45.0%
CTTCTCTGCATGTTACGATG+TGG + chr8_1:18892662-18892681 Msa1183610:intron 45.0%
CCGTCAAACTATTGCTACGT+TGG - chr8_1:18892817-18892836 None:intergenic 45.0%
GCAGCTCTTTCAACAAATGG+TGG + chr8_1:18892917-18892936 Msa1183610:CDS 45.0%
CGATGATTTCCTAACGGCTT+TGG + chr8_1:18892991-18893010 Msa1183610:CDS 45.0%
!! TTCCTAACGGCTTTGGAGTA+TGG + chr8_1:18892998-18893017 Msa1183610:CDS 45.0%
TTCCATACTCCAAAGCCGTT+AGG - chr8_1:18893003-18893022 None:intergenic 45.0%
TTACATTCTTTCCAGGGGCT+TGG + chr8_1:18893115-18893134 Msa1183610:intron 45.0%
TACATTCTTTCCAGGGGCTT+GGG + chr8_1:18893116-18893135 Msa1183610:intron 45.0%
AATAGCCTTCCCAGTACTCA+AGG + chr8_1:18893189-18893208 Msa1183610:CDS 45.0%
TGGAGGACGACGGAGAATTA+CGG - chr8_1:18884985-18885004 None:intergenic 50.0%
AATAGACTCCCTATCGGAGG+TGG - chr8_1:18885014-18885033 None:intergenic 50.0%
TCGAATAGACTCCCTATCGG+AGG - chr8_1:18885017-18885036 None:intergenic 50.0%
GGCTCGAATAGACTCCCTAT+CGG - chr8_1:18885020-18885039 None:intergenic 50.0%
! TTTGTGTCGATGTCGGACAC+CGG + chr8_1:18885308-18885327 Msa1183610:intron 50.0%
GTGCCACGATTAAGCGCTTA+TGG + chr8_1:18885355-18885374 Msa1183610:intron 50.0%
GAGCCTATGAACATGCCCAT+AGG - chr8_1:18885525-18885544 None:intergenic 50.0%
GCCCAAATGGATCTTGTGCT+AGG + chr8_1:18886863-18886882 Msa1183610:intron 50.0%
CCCCTAGCACAAGATCCATT+TGG - chr8_1:18886868-18886887 None:intergenic 50.0%
ACTGGCCCGTCTCAGATAAT+AGG - chr8_1:18887203-18887222 None:intergenic 50.0%
CAACTTTACCAGTTGCGCCA+AGG - chr8_1:18887382-18887401 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG + chr8_1:18887404-18887423 Msa1183610:intron 50.0%
TCATGTGACTGGAAGGTCAC+GGG + chr8_1:18887405-18887424 Msa1183610:intron 50.0%
TGTGTTCCGCAAAAGAGCCA+AGG + chr8_1:18888343-18888362 Msa1183610:CDS 50.0%
ATGTCCCGTGATCAAGACAC+AGG - chr8_1:18890587-18890606 None:intergenic 50.0%
ATCACGCGTGGCACAACTAT+TGG + chr8_1:18890862-18890881 Msa1183610:intron 50.0%
ATCCCACTATGGCAAGCACT+TGG + chr8_1:18891001-18891020 Msa1183610:intron 50.0%
CAACCAAGTGCTTGCCATAG+TGG - chr8_1:18891007-18891026 None:intergenic 50.0%
CACGACGGTTGTTGGAATGT+TGG - chr8_1:18891104-18891123 None:intergenic 50.0%
CAGTGTGCTCTTGCAGTTCA+CGG + chr8_1:18891434-18891453 Msa1183610:CDS 50.0%
CGGGTGTAATGATTCCGTAC+AGG + chr8_1:18891558-18891577 Msa1183610:intron 50.0%
TATGTTTGGAAAGGCCCTGG+AGG + chr8_1:18891590-18891609 Msa1183610:CDS 50.0%
CAAGCTACTCTGAGTACCCT+TGG + chr8_1:18891694-18891713 Msa1183610:CDS 50.0%
GGCAGATTGGCATGCTTCAA+TGG - chr8_1:18891749-18891768 None:intergenic 50.0%
AACCTCGTTAAGTAGGTGGC+CGG - chr8_1:18891770-18891789 None:intergenic 50.0%
AAACCTCTCGGTCAAACCTG+TGG - chr8_1:18892415-18892434 None:intergenic 50.0%
! TTCAGGCATCGCAGCTTGTA+TGG + chr8_1:18892523-18892542 Msa1183610:intron 50.0%
! TCAGGCATCGCAGCTTGTAT+GGG + chr8_1:18892524-18892543 Msa1183610:intron 50.0%
TATGGAATGCCTCCAGCTTC+TGG + chr8_1:18893016-18893035 Msa1183610:CDS 50.0%
! AATGCCTCCAGCTTCTGGAA+TGG + chr8_1:18893021-18893040 Msa1183610:CDS 50.0%
TGTACCATTCCAGAAGCTGG+AGG - chr8_1:18893028-18893047 None:intergenic 50.0%
!! TTGGACCTTGAGTACTGGGA+AGG - chr8_1:18893197-18893216 None:intergenic 50.0%
AGAATTACGGCGGTTGCGAC+CGG - chr8_1:18884972-18884991 None:intergenic 55.0%
AGGACGACGGAGAATTACGG+CGG - chr8_1:18884982-18885001 None:intergenic 55.0%
CACCACTTCCACCTCCGATA+GGG + chr8_1:18885003-18885022 Msa1183610:CDS 55.0%
TCGAGCCATGCGCTTGAAGA+AGG + chr8_1:18885033-18885052 Msa1183610:CDS 55.0%
! TATCTGAGACGGGCCAGTCT+AGG + chr8_1:18887205-18887224 Msa1183610:intron 55.0%
! ATCTGAGACGGGCCAGTCTA+GGG + chr8_1:18887206-18887225 Msa1183610:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr8_1:18887417-18887436 Msa1183610:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr8_1:18887515-18887534 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr8_1:18887516-18887535 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr8_1:18887520-18887539 Msa1183610:intron 55.0%
CGGAACACATCAGCTACCTC+TGG - chr8_1:18888332-18888351 None:intergenic 55.0%
AGGCACACATGTACTGGGTG+AGG - chr8_1:18888694-18888713 None:intergenic 55.0%
AGCGCAGGCACACATGTACT+GGG - chr8_1:18888699-18888718 None:intergenic 55.0%
TAGCGCAGGCACACATGTAC+TGG - chr8_1:18888700-18888719 None:intergenic 55.0%
TGGAGTTGTTGCCACGTGAC+TGG + chr8_1:18890882-18890901 Msa1183610:intron 55.0%
AGTTGTTGCCACGTGACTGG+TGG + chr8_1:18890885-18890904 Msa1183610:intron 55.0%
ATCCATGACCACCAGTCACG+TGG - chr8_1:18890896-18890915 None:intergenic 55.0%
TTTGGAAAGGCCCTGGAGGA+GGG + chr8_1:18891594-18891613 Msa1183610:CDS 55.0%
TAAGTAGGTGGCCGGCAGAT+TGG - chr8_1:18891762-18891781 None:intergenic 55.0%
CTGCGGTGTGGTTTAGCCAA+TGG - chr8_1:18892064-18892083 None:intergenic 55.0%
! CATTGGCTAAACCACACCGC+AGG + chr8_1:18892062-18892081 Msa1183610:CDS 55.0%
GATCCACAGGTTTGACCGAG+AGG + chr8_1:18892409-18892428 Msa1183610:intron 55.0%
! GTGGAAGTGGTGGAGGACGA+CGG - chr8_1:18884995-18885014 None:intergenic 60.0%
ATCGGAGGTGGAAGTGGTGG+AGG - chr8_1:18885002-18885021 None:intergenic 60.0%
CCTATCGGAGGTGGAAGTGG+TGG - chr8_1:18885005-18885024 None:intergenic 60.0%
CCACCACTTCCACCTCCGAT+AGG + chr8_1:18885002-18885021 Msa1183610:CDS 60.0%
CTCCCTATCGGAGGTGGAAG+TGG - chr8_1:18885008-18885027 None:intergenic 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + chr8_1:18887371-18887390 Msa1183610:intron 60.0%
CATACGCAGGGTCCGGGAAA+GGG - chr8_1:18887503-18887522 None:intergenic 60.0%
TTTCCCGGACCCTGCGTATG+CGG + chr8_1:18887503-18887522 Msa1183610:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr8_1:18887521-18887540 Msa1183610:intron 60.0%
TGCCACGTGACTGGTGGTCA+TGG + chr8_1:18890891-18890910 Msa1183610:intron 60.0%
GTTTGGAAAGGCCCTGGAGG+AGG + chr8_1:18891593-18891612 Msa1183610:CDS 60.0%
TGCATGGTCTCCCTCCTCCA+GGG - chr8_1:18891607-18891626 None:intergenic 60.0%
TGCCGGCCACCTACTTAACG+AGG + chr8_1:18891765-18891784 Msa1183610:CDS 60.0%
TCCAGGGGCTTGGGATTGAC+AGG + chr8_1:18893125-18893144 Msa1183610:intron 60.0%
ACCTGTCAATCCCAAGCCCC+TGG - chr8_1:18893129-18893148 None:intergenic 60.0%
GGGGCTTGGGATTGACAGGT+TGG + chr8_1:18893129-18893148 Msa1183610:intron 60.0%
! GCGCGGATAAGAAGCGTGCG+AGG - chr8_1:18884923-18884942 None:intergenic 65.0%
ATTACGGCGGTTGCGACCGG+AGG - chr8_1:18884969-18884988 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+AGG - chr8_1:18887504-18887523 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr8_1:18887504-18887523 Msa1183610:intron 65.0%
GTGCATGGTCTCCCTCCTCC+AGG - chr8_1:18891608-18891627 None:intergenic 65.0%
TTCTAGGCGTCCTCGCTGCC+AGG - chr8_1:18892867-18892886 None:intergenic 65.0%
CTCCCGCATACGCAGGGTCC+GGG - chr8_1:18887509-18887528 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG - chr8_1:18887510-18887529 None:intergenic 70.0%
GCGGTTGCGACCGGAGGAGG+TGG - chr8_1:18884963-18884982 None:intergenic 75.0%
ACGGCGGTTGCGACCGGAGG+AGG - chr8_1:18884966-18884985 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 18884769 18893503 18884769 ID=Msa1183610;Name=Msa1183610
chr8_1 mRNA 18884769 18893503 18884769 ID=Msa1183610-mRNA-1;Parent=Msa1183610;Name=Msa1183610-mRNA-1;_AED=0.07;_eAED=0.07;_QI=73|1|1|1|1|1|14|281|579
chr8_1 exon 18884769 18885054 18884769 ID=Msa1183610-mRNA-1:exon:7275;Parent=Msa1183610-mRNA-1
chr8_1 exon 18885795 18886013 18885795 ID=Msa1183610-mRNA-1:exon:7276;Parent=Msa1183610-mRNA-1
chr8_1 exon 18886185 18886293 18886185 ID=Msa1183610-mRNA-1:exon:7277;Parent=Msa1183610-mRNA-1
chr8_1 exon 18887782 18887890 18887782 ID=Msa1183610-mRNA-1:exon:7278;Parent=Msa1183610-mRNA-1
chr8_1 exon 18888307 18888364 18888307 ID=Msa1183610-mRNA-1:exon:7279;Parent=Msa1183610-mRNA-1
chr8_1 exon 18889242 18889310 18889242 ID=Msa1183610-mRNA-1:exon:7280;Parent=Msa1183610-mRNA-1
chr8_1 exon 18890118 18890225 18890118 ID=Msa1183610-mRNA-1:exon:7281;Parent=Msa1183610-mRNA-1
chr8_1 exon 18890696 18890788 18890696 ID=Msa1183610-mRNA-1:exon:7282;Parent=Msa1183610-mRNA-1
chr8_1 exon 18891374 18891478 18891374 ID=Msa1183610-mRNA-1:exon:7283;Parent=Msa1183610-mRNA-1
chr8_1 exon 18891580 18891786 18891580 ID=Msa1183610-mRNA-1:exon:7284;Parent=Msa1183610-mRNA-1
chr8_1 exon 18891989 18892083 18891989 ID=Msa1183610-mRNA-1:exon:7285;Parent=Msa1183610-mRNA-1
chr8_1 exon 18892410 18892500 18892410 ID=Msa1183610-mRNA-1:exon:7286;Parent=Msa1183610-mRNA-1
chr8_1 exon 18892872 18893042 18892872 ID=Msa1183610-mRNA-1:exon:7287;Parent=Msa1183610-mRNA-1
chr8_1 exon 18893130 18893503 18893130 ID=Msa1183610-mRNA-1:exon:7288;Parent=Msa1183610-mRNA-1
chr8_1 five_prime_UTR 18884769 18884841 18884769 ID=Msa1183610-mRNA-1:five_prime_utr;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18884842 18885054 18884842 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18885795 18886013 18885795 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18886185 18886293 18886185 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18887782 18887890 18887782 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18888307 18888364 18888307 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18889242 18889310 18889242 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18890118 18890225 18890118 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18890696 18890788 18890696 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18891374 18891478 18891374 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18891580 18891786 18891580 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18891989 18892083 18891989 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18892410 18892500 18892410 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18892872 18893042 18892872 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 CDS 18893130 18893222 18893130 ID=Msa1183610-mRNA-1:cds;Parent=Msa1183610-mRNA-1
chr8_1 three_prime_UTR 18893223 18893503 18893223 ID=Msa1183610-mRNA-1:three_prime_utr;Parent=Msa1183610-mRNA-1
Gene Sequence

>Msa1183610

ATGGTGGAGGCGTTGAAACTGTTGAACCTAACATGGAACCCATTGATGAACAATTTCATTCACGCATTTCGTCGAACACCTCGCACGCTTCTTATCCGCGCCTCTTCTTCTTATTCAACCACCTCCTCCGGTCGCAACCGCCGTAATTCTCCGTCGTCCTCCACCACTTCCACCTCCGATAGGGAGTCTATTCGAGCCATGCGCTTGAAGAAGGTTGAAGAACTTAGAAGCAAGGGGCTCGATCCCTATGCTTATGAGTGGAACAAAACGCACAGTGCAAATCAGTTACAAGATATATATAGAGATTTAGGAAATGGTGAAGAAACTAATAGTGAGAATGATCATGTATCTATTGCGGGAAGAATTGTTGCTAGGAGAGCATTTGGAAAGCTTGCCTTTTTGACACTAAGAGACGATTCAGGGACAATTCAGCTCTATTGCGAAAAGGAGAGACTTGATGATCAGTTTGAGCAGTTGAAGGCATATGTTGATATTGGTGATATACTAGGTGCAAGAGGAACAATTAAACGCACGGAAAAAGGGGAACTTTCTGTGTGTGTGCTATCTTTTGCAATCCTTACAAAATCTTTGCTTCCACTTCCTGACAAATATCACGGTCTAACTGATATAGATATACGCTATCGCCAGAGGTATGTAGATATGATTGCAAATCCAGAGGTAGCTGATGTGTTCCGCAAAAGAGCCAAGGTTGTATCAGAGATACGGAGGACAATGGATTCTTTAGGTTTCGTTGAGGTTGAAACTCCAGTTTTGCAGGGAGAAGCTGGAGGAGCCGAAGCTAGACCATTCGTGACATACCACAATTCTCTTGGAAGAGACTTATATTTGAGAATTGCGACTGAATTGCACCTAAAGAGAATGCTGGTGGGTGGGTTTGAAAAAGTATACGAGATTGGTCGAATATTTAGAAATGAAGGAATATCAACTCGTCATAATCCGGAATTTACAACTATAGAGATGTATGAAGCATACTCAGACTACCAAAGCATGATGAATTTAGCAGAGGAAATTGTCACTCAGTGTGCTCTTGCAGTTCACGGAAAGCTTACTGTTGATTATCAGGGAGTTGAGATATGTTTGGAAAGGCCCTGGAGGAGGGAGACCATGCACAATCTTGTTAAAGAAATTTCCGGGATCGATTTCAATGAATTGGGAAATGATCTCGAGGTTGCAAAACAAGCTACTCTGAGTACCCTTGGAAAGAATCTTGATAACAAGGATAAAGCTTCCATTGAAGCATGCCAATCTGCCGGCCACCTACTTAACGAGGTTTTTGAGATATATGTAGAACCAAAGCTCATCCAACCTACATTTGTTTTAGACTACCCAATTGAGATATCTCCATTGGCTAAACCACACCGCAGATCCACAGGTTTGACCGAGAGGTTTGAACTTTTCATTTGTGGTCGGGAACTAGGCAATGCATTCTCTGAATTGACTGATCCTATAGATCAGCGAGGACGCCTAGAAGATCAAATTAGACAACACAAAAAGAAAAAAGCAGCTCTTTCAACAAATGGTGGTAAAAAAGAAGGAATAGAAAATGAGGATGATTCGTATGATGTGACTCTTGACGATGATTTCCTAACGGCTTTGGAGTATGGAATGCCTCCAGCTTCTGGAATGGGGCTTGGGATTGACAGGTTGGTGATGCTTTTGACAAATTCTCCCAGCATTAGAGATGTAATAGCCTTCCCAGTACTCAAGGTCCAACAATAA

Protein sequence

>Msa1183610

MVEALKLLNLTWNPLMNNFIHAFRRTPRTLLIRASSSYSTTSSGRNRRNSPSSSTTSTSDRESIRAMRLKKVEELRSKGLDPYAYEWNKTHSANQLQDIYRDLGNGEETNSENDHVSIAGRIVARRAFGKLAFLTLRDDSGTIQLYCEKERLDDQFEQLKAYVDIGDILGARGTIKRTEKGELSVCVLSFAILTKSLLPLPDKYHGLTDIDIRYRQRYVDMIANPEVADVFRKRAKVVSEIRRTMDSLGFVEVETPVLQGEAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYQSMMNLAEEIVTQCALAVHGKLTVDYQGVEICLERPWRRETMHNLVKEISGIDFNELGNDLEVAKQATLSTLGKNLDNKDKASIEACQSAGHLLNEVFEIYVEPKLIQPTFVLDYPIEISPLAKPHRRSTGLTERFELFICGRELGNAFSELTDPIDQRGRLEDQIRQHKKKKAALSTNGGKKEGIENEDDSYDVTLDDDFLTALEYGMPPASGMGLGIDRLVMLLTNSPSIRDVIAFPVLKVQQ*