AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0908270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 97 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGTTCATGGTTCGATATTC+TGG 0.185586 6_2:+9513145 None:intergenic
TGCACGCCTCCGTTACCTTT+TGG 0.196515 6_2:-9512206 Msa0908270:CDS
CAGCTCACGTACCGCTTTAA+TGG 0.245260 6_2:-9512501 Msa0908270:CDS
TCATGCCTTTACTTCGTTCA+TGG 0.272664 6_2:+9513132 None:intergenic
GGCTGTGATACCGGAGGCTC+TGG 0.279951 6_2:-9512747 Msa0908270:CDS
TCTCAGGTAGACAGTTTCTA+TGG 0.287253 6_2:+9512171 None:intergenic
GGCAAAGAAGGCCTCCTTCC+GGG 0.289862 6_2:+9512070 None:intergenic
TCTAACGCCCACACCGGATA+TGG 0.325084 6_2:-9512552 Msa0908270:CDS
CAGAGAACCCATCGCTGTTT+CGG 0.333458 6_2:-9512768 Msa0908270:CDS
TCCTCGGGCCAGACGGAGAT+TGG 0.349112 6_2:+9512235 None:intergenic
TCCCGTCGATGTGAGCTCTT+GGG 0.355274 6_2:-9512407 Msa0908270:CDS
AGGCAAAGAAGGCCTCCTTC+CGG 0.382980 6_2:+9512069 None:intergenic
AAAGTTACTCTAGGGATAAC+AGG 0.383241 6_2:+9512375 None:intergenic
CATTAAAGCGGTACGTGAGC+TGG 0.384796 6_2:+9512502 None:intergenic
TTCCCGTCGATGTGAGCTCT+TGG 0.386490 6_2:-9512408 Msa0908270:CDS
AGCTCACGTACCGCTTTAAT+GGG 0.395506 6_2:-9512500 Msa0908270:CDS
CGCTGTTTCGGCTGTGATAC+CGG 0.403155 6_2:-9512756 Msa0908270:CDS
AATAGGAGAGCACTCATCTT+GGG 0.408942 6_2:-9512715 Msa0908270:CDS
CCCTTCTGCCTTTGCACTCG+AGG 0.411231 6_2:-9512259 Msa0908270:CDS
CTCACATCGACGGGAAGGTT+TGG 0.420533 6_2:+9512415 None:intergenic
TGTAGTATGTTCCAAGGGTT+GGG 0.424624 6_2:+9512470 None:intergenic
AGTTGAACAATCAAAATAGA+TGG 0.442588 6_2:-9512976 Msa0908270:CDS
CCACCAAGTTCGGGATGGAT+TGG 0.447763 6_2:-9513192 None:intergenic
CTTCCATCCCTAGCTATTCA+AGG 0.450796 6_2:-9513038 Msa0908270:intron
CTGTAGTATGTTCCAAGGGT+TGG 0.452990 6_2:+9512469 None:intergenic
GAGACAGTTCGGTCCATATC+CGG 0.455659 6_2:+9512539 None:intergenic
ACAGACCAAGGGACAGTCTC+AGG 0.456050 6_2:+9512155 None:intergenic
CAGAACGTCGTGAGACAGTT+CGG 0.457061 6_2:+9512528 None:intergenic
CCTTCTGCCTTTGCACTCGA+GGG 0.461384 6_2:-9512258 Msa0908270:CDS
GACTGTCCCTTGGTCTGTAC+TGG 0.464231 6_2:-9512150 Msa0908270:CDS
CCCCAAGAGCTCACATCGAC+GGG 0.472021 6_2:+9512406 None:intergenic
GTTCGATATTCTGGTGTCCT+AGG 0.478291 6_2:+9513154 None:intergenic
TCCGACTTCCCCAGAGCCTC+CGG 0.480691 6_2:+9512737 None:intergenic
CTCGAGGGCCAATCTCCGTC+TGG 0.480699 6_2:-9512243 Msa0908270:CDS
GAATAGGAGAGCACTCATCT+TGG 0.487596 6_2:-9512716 Msa0908270:CDS
GGCTCTGGGGAAGTCGGAAT+AGG 0.491163 6_2:-9512732 Msa0908270:CDS
TCCCTAGCTATTCAAGGGAT+GGG 0.493688 6_2:-9513032 Msa0908270:intron
ATTGCCTGATCGAATTGATC+AGG 0.499380 6_2:-9512951 Msa0908270:intron
GATGTCGGCTCTTCGCCACC+TGG 0.508239 6_2:+9512444 None:intergenic
TCCTGCGCAGCTTAGGTGGA+AGG 0.508478 6_2:+9512049 None:intergenic
GCTGTGATACCGGAGGCTCT+GGG 0.508804 6_2:-9512746 Msa0908270:CDS
CTCAGGTAGACAGTTTCTAT+GGG 0.510655 6_2:+9512172 None:intergenic
CCCTCGAGTGCAAAGGCAGA+AGG 0.511073 6_2:+9512258 None:intergenic
ATGACCTGATCAATTCGATC+AGG 0.514268 6_2:+9512947 None:intergenic
ATCCCTAGCTATTCAAGGGA+TGG 0.515266 6_2:-9513033 Msa0908270:intron
GCAAAGAAGGCCTCCTTCCG+GGG 0.515468 6_2:+9512071 None:intergenic
CCCTAGCTATTCAAGGGATG+GGG 0.516664 6_2:-9513031 Msa0908270:intron
GAGGCGTGCAAAGGTTTCCT+CGG 0.526013 6_2:+9512219 None:intergenic
AGGCGTGCAAAGGTTTCCTC+GGG 0.527025 6_2:+9512220 None:intergenic
CCAGAGTGGTATCTCACTGA+TGG 0.527423 6_2:-9512103 Msa0908270:CDS
CCCGTCGATGTGAGCTCTTG+GGG 0.534121 6_2:-9512406 Msa0908270:CDS
CCTTGGTCTGTACTGGCACA+AGG 0.538614 6_2:-9512143 Msa0908270:CDS
ATTAAAGCGGTACGTGAGCT+GGG 0.539036 6_2:+9512503 None:intergenic
AAGGTTTGGCACCTCGATGT+CGG 0.545826 6_2:+9512429 None:intergenic
TGGGCGAACAGCCCAACCCT+TGG 0.548090 6_2:-9512481 Msa0908270:CDS
CAAAGAAGGCCTCCTTCCGG+GGG 0.550054 6_2:+9512072 None:intergenic
GCTTAGGTGGAAGGCAAAGA+AGG 0.550243 6_2:+9512058 None:intergenic
TCCCCAAGAGCTCACATCGA+CGG 0.555494 6_2:+9512405 None:intergenic
GCCAATCTCCGTCTGGCCCG+AGG 0.562208 6_2:-9512236 Msa0908270:CDS
TGGAGCTGTAGTATGTTCCA+AGG 0.564153 6_2:+9512464 None:intergenic
ACCGGAGGCTCTGGGGAAGT+CGG 0.567230 6_2:-9512738 Msa0908270:CDS
TATCACAGCCGAAACAGCGA+TGG 0.574058 6_2:+9512760 None:intergenic
TTGGAACATACTACAGCTCC+AGG 0.579135 6_2:-9512462 Msa0908270:CDS
GTCTACCTGAGACTGTCCCT+TGG 0.586612 6_2:-9512160 Msa0908270:CDS
AAGGTAACGGAGGCGTGCAA+AGG 0.595805 6_2:+9512210 None:intergenic
CCTCGAGTGCAAAGGCAGAA+GGG 0.595841 6_2:+9512259 None:intergenic
TTCCATCCCTAGCTATTCAA+GGG 0.597126 6_2:-9513037 Msa0908270:intron
AAAGGTTTCCTCGGGCCAGA+CGG 0.597813 6_2:+9512228 None:intergenic
CTGTGATACCGGAGGCTCTG+GGG 0.598997 6_2:-9512745 Msa0908270:CDS
AAGAAGGCCTCCTTCCGGGG+GGG 0.600255 6_2:+9512074 None:intergenic
GGTGTGGTTCCTCTACGCCT+AGG 0.606362 6_2:-9513171 Msa0908270:CDS
TGGGGCGTAGGCCTCCCAAA+AGG 0.606913 6_2:+9512191 None:intergenic
GTTCGGTCCATATCCGGTGT+GGG 0.608178 6_2:+9512545 None:intergenic
AAGAGCTCACATCGACGGGA+AGG 0.613365 6_2:+9512410 None:intergenic
AGTTCGGTCCATATCCGGTG+TGG 0.618273 6_2:+9512544 None:intergenic
GGGCTGTTCGCCCATTAAAG+CGG 0.619701 6_2:+9512490 None:intergenic
ATCACAGCCGAAACAGCGAT+GGG 0.621115 6_2:+9512761 None:intergenic
TTCTGGTGTCCTAGGCGTAG+AGG 0.622900 6_2:+9513162 None:intergenic
AGACAGTTTCTATGGGGCGT+AGG 0.622986 6_2:+9512179 None:intergenic
ATAGGAGAGCACTCATCTTG+GGG 0.623240 6_2:-9512714 Msa0908270:intron
AAAGAAGGCCTCCTTCCGGG+GGG 0.627949 6_2:+9512073 None:intergenic
GTAGGCCTCCCAAAAGGTAA+CGG 0.632223 6_2:+9512197 None:intergenic
CCTAGCTATTCAAGGGATGG+GGG 0.634157 6_2:-9513030 Msa0908270:intron
AAGTTCGGGATGGATTGGTG+TGG 0.636372 6_2:-9513187 None:intergenic
GGAGCTGTAGTATGTTCCAA+GGG 0.640199 6_2:+9512465 None:intergenic
CCTTGTGCCAGTACAGACCA+AGG 0.645647 6_2:+9512143 None:intergenic
CAATGCTCTAACGCCCACAC+CGG 0.666176 6_2:-9512558 Msa0908270:CDS
AGATTGGCCCTCGAGTGCAA+AGG 0.670375 6_2:+9512251 None:intergenic
CCATCAGTGAGATACCACTC+TGG 0.671241 6_2:+9512103 None:intergenic
GAATTCTAGCTCTTCCAGAG+TGG 0.675255 6_2:-9512117 Msa0908270:CDS
GGCCTCCCAAAAGGTAACGG+AGG 0.683463 6_2:+9512200 None:intergenic
CTTGTGCCAGTACAGACCAA+GGG 0.693537 6_2:+9512144 None:intergenic
GTGGGCGTTAGAGCATTGAG+AGG 0.697492 6_2:+9512563 None:intergenic
GTGGCGAAGAGCCGACATCG+AGG 0.704477 6_2:-9512440 Msa0908270:CDS
TGTTTCGGCTGTGATACCGG+AGG 0.717886 6_2:-9512753 Msa0908270:CDS
TCAGGTAGACAGTTTCTATG+GGG 0.720720 6_2:+9512173 None:intergenic
GAACATACTACAGCTCCAGG+TGG 0.771466 6_2:-9512459 Msa0908270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGTTGAACAATCAAAATAGA+TGG - chr6_2:9512262-9512281 Msa0908270:CDS 25.0%
! AGTTGAACAATCAAAATAGA+TGG - chr6_2:9512262-9512281 Msa0908270:CDS 25.0%
CACCTATCGTTAATGAAAAA+CGG - chr6_2:9512386-9512405 Msa0908270:CDS 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + chr6_2:9512427-9512446 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG + chr6_2:9512874-9512893 None:intergenic 30.0%
CACCTATCGTTAATGAAAAA+CGG - chr6_2:9512386-9512405 Msa0908270:CDS 30.0%
!!! AGTTTTGAGAATTCAAGAGA+AGG + chr6_2:9512427-9512446 None:intergenic 30.0%
AACGGATAAAAGTTACTCTA+GGG + chr6_2:9512874-9512893 None:intergenic 30.0%
! CATATTGACTAGTCAATGTC+AGG - chr6_2:9512137-9512156 Msa0908270:CDS 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + chr6_2:9512391-9512410 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG + chr6_2:9512866-9512885 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG + chr6_2:9512875-9512894 None:intergenic 35.0%
! CATATTGACTAGTCAATGTC+AGG - chr6_2:9512137-9512156 Msa0908270:CDS 35.0%
!!! AGCCGTTTTTCATTAACGAT+AGG + chr6_2:9512391-9512410 None:intergenic 35.0%
! AAAGTTACTCTAGGGATAAC+AGG + chr6_2:9512866-9512885 None:intergenic 35.0%
CAACGGATAAAAGTTACTCT+AGG + chr6_2:9512875-9512894 None:intergenic 35.0%
TCGTTCATGGTTCGATATTC+TGG + chr6_2:9512096-9512115 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - chr6_2:9512101-9512120 Msa0908270:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + chr6_2:9512109-9512128 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + chr6_2:9512201-9512220 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - chr6_2:9512201-9512220 Msa0908270:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - chr6_2:9512287-9512306 Msa0908270:intron 40.0%
ATGACCTGATCAATTCGATC+AGG + chr6_2:9512294-9512313 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - chr6_2:9512303-9512322 Msa0908270:intron 40.0%
AGAACAAGGTTCAAGTCTAC+CGG - chr6_2:9512317-9512336 Msa0908270:intron 40.0%
CATTAACGATAGGTGTCAAG+TGG + chr6_2:9512381-9512400 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + chr6_2:9512421-9512440 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG - chr6_2:9512523-9512542 Msa0908270:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + chr6_2:9512771-9512790 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - chr6_2:9512880-9512899 Msa0908270:intron 40.0%
TCAGGTAGACAGTTTCTATG+GGG + chr6_2:9513068-9513087 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + chr6_2:9513069-9513088 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + chr6_2:9513070-9513089 None:intergenic 40.0%
TCGTTCATGGTTCGATATTC+TGG + chr6_2:9512096-9512115 None:intergenic 40.0%
TCGAACCATGAACGAAGTAA+AGG - chr6_2:9512101-9512120 Msa0908270:CDS 40.0%
TCATGCCTTTACTTCGTTCA+TGG + chr6_2:9512109-9512128 None:intergenic 40.0%
TTGAATAGCTAGGGATGGAA+GGG + chr6_2:9512201-9512220 None:intergenic 40.0%
TTCCATCCCTAGCTATTCAA+GGG - chr6_2:9512201-9512220 Msa0908270:CDS 40.0%
ATTGCCTGATCGAATTGATC+AGG - chr6_2:9512287-9512306 Msa0908270:intron 40.0%
ATGACCTGATCAATTCGATC+AGG + chr6_2:9512294-9512313 None:intergenic 40.0%
GATCAGGTCATGTAAGAACA+AGG - chr6_2:9512303-9512322 Msa0908270:intron 40.0%
AGAACAAGGTTCAAGTCTAC+CGG - chr6_2:9512317-9512336 Msa0908270:intron 40.0%
CATTAACGATAGGTGTCAAG+TGG + chr6_2:9512381-9512400 None:intergenic 40.0%
GAGAATTCAAGAGAAGGTCA+CGG + chr6_2:9512421-9512440 None:intergenic 40.0%
!! AATAGGAGAGCACTCATCTT+GGG - chr6_2:9512523-9512542 Msa0908270:CDS 40.0%
TGTAGTATGTTCCAAGGGTT+GGG + chr6_2:9512771-9512790 None:intergenic 40.0%
! AACTTTTATCCGTTGAGCGA+CGG - chr6_2:9512880-9512899 Msa0908270:intron 40.0%
TCAGGTAGACAGTTTCTATG+GGG + chr6_2:9513068-9513087 None:intergenic 40.0%
CTCAGGTAGACAGTTTCTAT+GGG + chr6_2:9513069-9513088 None:intergenic 40.0%
TCTCAGGTAGACAGTTTCTA+TGG + chr6_2:9513070-9513089 None:intergenic 40.0%
GTTCGATATTCTGGTGTCCT+AGG + chr6_2:9512087-9512106 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - chr6_2:9512154-9512173 Msa0908270:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - chr6_2:9512159-9512178 Msa0908270:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + chr6_2:9512164-9512183 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + chr6_2:9512202-9512221 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - chr6_2:9512200-9512219 Msa0908270:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + chr6_2:9512206-9512225 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - chr6_2:9512205-9512224 Msa0908270:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - chr6_2:9512206-9512225 Msa0908270:CDS 45.0%
TTCAAGTCTACCGGTCTGTT+AGG - chr6_2:9512326-9512345 Msa0908270:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG + chr6_2:9512355-9512374 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG - chr6_2:9512522-9512541 Msa0908270:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG - chr6_2:9512524-9512543 Msa0908270:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - chr6_2:9512605-9512624 Msa0908270:intron 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + chr6_2:9512738-9512757 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - chr6_2:9512738-9512757 Msa0908270:CDS 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + chr6_2:9512772-9512791 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + chr6_2:9512776-9512795 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + chr6_2:9512777-9512796 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - chr6_2:9512776-9512795 Msa0908270:intron 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - chr6_2:9513121-9513140 Msa0908270:intron 45.0%
GTTCGATATTCTGGTGTCCT+AGG + chr6_2:9512087-9512106 None:intergenic 45.0%
GTCAGGTCCTAATTCTTGAC+TGG - chr6_2:9512154-9512173 Msa0908270:CDS 45.0%
GTCCTAATTCTTGACTGGAG+AGG - chr6_2:9512159-9512178 Msa0908270:CDS 45.0%
GTCCTCTCCAGTCAAGAATT+AGG + chr6_2:9512164-9512183 None:intergenic 45.0%
CTTGAATAGCTAGGGATGGA+AGG + chr6_2:9512202-9512221 None:intergenic 45.0%
CTTCCATCCCTAGCTATTCA+AGG - chr6_2:9512200-9512219 Msa0908270:CDS 45.0%
ATCCCTTGAATAGCTAGGGA+TGG + chr6_2:9512206-9512225 None:intergenic 45.0%
ATCCCTAGCTATTCAAGGGA+TGG - chr6_2:9512205-9512224 Msa0908270:CDS 45.0%
TCCCTAGCTATTCAAGGGAT+GGG - chr6_2:9512206-9512225 Msa0908270:CDS 45.0%
TTCAAGTCTACCGGTCTGTT+AGG - chr6_2:9512326-9512345 Msa0908270:intron 45.0%
TGCAGTAATGTATGCAGCTG+AGG + chr6_2:9512355-9512374 None:intergenic 45.0%
!! GAATAGGAGAGCACTCATCT+TGG - chr6_2:9512522-9512541 Msa0908270:CDS 45.0%
!! ATAGGAGAGCACTCATCTTG+GGG - chr6_2:9512524-9512543 Msa0908270:CDS 45.0%
TTTACCGTTGGCACGATAAC+TGG - chr6_2:9512605-9512624 Msa0908270:intron 45.0%
ATTAAAGCGGTACGTGAGCT+GGG + chr6_2:9512738-9512757 None:intergenic 45.0%
AGCTCACGTACCGCTTTAAT+GGG - chr6_2:9512738-9512757 Msa0908270:CDS 45.0%
CTGTAGTATGTTCCAAGGGT+TGG + chr6_2:9512772-9512791 None:intergenic 45.0%
GGAGCTGTAGTATGTTCCAA+GGG + chr6_2:9512776-9512795 None:intergenic 45.0%
TGGAGCTGTAGTATGTTCCA+AGG + chr6_2:9512777-9512796 None:intergenic 45.0%
TTGGAACATACTACAGCTCC+AGG - chr6_2:9512776-9512795 Msa0908270:intron 45.0%
!! GAATTCTAGCTCTTCCAGAG+TGG - chr6_2:9513121-9513140 Msa0908270:intron 45.0%
TTGACTGGAGAGGACACCAA+AGG - chr6_2:9512169-9512188 Msa0908270:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + chr6_2:9512210-9512229 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - chr6_2:9512207-9512226 Msa0908270:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - chr6_2:9512208-9512227 Msa0908270:CDS 50.0%
CAGAGAACCCATCGCTGTTT+CGG - chr6_2:9512470-9512489 Msa0908270:CDS 50.0%
ATCACAGCCGAAACAGCGAT+GGG + chr6_2:9512480-9512499 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG + chr6_2:9512481-9512500 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + chr6_2:9512612-9512631 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + chr6_2:9512652-9512671 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + chr6_2:9512702-9512721 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + chr6_2:9512713-9512732 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + chr6_2:9512739-9512758 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - chr6_2:9512737-9512756 Msa0908270:CDS 50.0%
GAACATACTACAGCTCCAGG+TGG - chr6_2:9512779-9512798 Msa0908270:intron 50.0%
AAGGTTTGGCACCTCGATGT+CGG + chr6_2:9512812-9512831 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + chr6_2:9513044-9513063 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + chr6_2:9513062-9513081 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + chr6_2:9513097-9513116 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + chr6_2:9513138-9513157 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - chr6_2:9513135-9513154 Msa0908270:intron 50.0%
TTGACTGGAGAGGACACCAA+AGG - chr6_2:9512169-9512188 Msa0908270:CDS 50.0%
CCCCATCCCTTGAATAGCTA+GGG + chr6_2:9512210-9512229 None:intergenic 50.0%
CCCTAGCTATTCAAGGGATG+GGG - chr6_2:9512207-9512226 Msa0908270:CDS 50.0%
CCTAGCTATTCAAGGGATGG+GGG - chr6_2:9512208-9512227 Msa0908270:CDS 50.0%
CAGAGAACCCATCGCTGTTT+CGG - chr6_2:9512470-9512489 Msa0908270:CDS 50.0%
ATCACAGCCGAAACAGCGAT+GGG + chr6_2:9512480-9512499 None:intergenic 50.0%
TATCACAGCCGAAACAGCGA+TGG + chr6_2:9512481-9512500 None:intergenic 50.0%
TGTGCCAGTTATCGTGCCAA+CGG + chr6_2:9512612-9512631 None:intergenic 50.0%
TTTCCCTAGTACGAGAGGAC+CGG + chr6_2:9512652-9512671 None:intergenic 50.0%
GAGACAGTTCGGTCCATATC+CGG + chr6_2:9512702-9512721 None:intergenic 50.0%
CAGAACGTCGTGAGACAGTT+CGG + chr6_2:9512713-9512732 None:intergenic 50.0%
CATTAAAGCGGTACGTGAGC+TGG + chr6_2:9512739-9512758 None:intergenic 50.0%
CAGCTCACGTACCGCTTTAA+TGG - chr6_2:9512737-9512756 Msa0908270:CDS 50.0%
GAACATACTACAGCTCCAGG+TGG - chr6_2:9512779-9512798 Msa0908270:intron 50.0%
AAGGTTTGGCACCTCGATGT+CGG + chr6_2:9512812-9512831 None:intergenic 50.0%
GTAGGCCTCCCAAAAGGTAA+CGG + chr6_2:9513044-9513063 None:intergenic 50.0%
AGACAGTTTCTATGGGGCGT+AGG + chr6_2:9513062-9513081 None:intergenic 50.0%
CTTGTGCCAGTACAGACCAA+GGG + chr6_2:9513097-9513116 None:intergenic 50.0%
CCATCAGTGAGATACCACTC+TGG + chr6_2:9513138-9513157 None:intergenic 50.0%
CCAGAGTGGTATCTCACTGA+TGG - chr6_2:9513135-9513154 Msa0908270:intron 50.0%
TTCTGGTGTCCTAGGCGTAG+AGG + chr6_2:9512079-9512098 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG + chr6_2:9512211-9512230 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - chr6_2:9512215-9512234 Msa0908270:CDS 55.0%
! GCTGAGGCATCCTAACAGAC+CGG + chr6_2:9512339-9512358 None:intergenic 55.0%
TTCTTTGCTCCATCCCCGCA+GGG - chr6_2:9512446-9512465 Msa0908270:CDS 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG - chr6_2:9512482-9512501 Msa0908270:CDS 55.0%
TGTTTCGGCTGTGATACCGG+AGG - chr6_2:9512485-9512504 Msa0908270:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - chr6_2:9512528-9512547 Msa0908270:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + chr6_2:9512588-9512607 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + chr6_2:9512601-9512620 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + chr6_2:9512602-9512621 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - chr6_2:9512616-9512635 Msa0908270:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - chr6_2:9512646-9512665 Msa0908270:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + chr6_2:9512651-9512670 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - chr6_2:9512651-9512670 Msa0908270:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + chr6_2:9512657-9512676 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + chr6_2:9512678-9512697 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - chr6_2:9512680-9512699 Msa0908270:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - chr6_2:9512686-9512705 Msa0908270:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + chr6_2:9512696-9512715 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + chr6_2:9512697-9512716 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + chr6_2:9512751-9512770 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + chr6_2:9512826-9512845 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + chr6_2:9512831-9512850 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - chr6_2:9512830-9512849 Msa0908270:intron 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - chr6_2:9512831-9512850 Msa0908270:intron 55.0%
TCCCCAAGAGCTCACATCGA+CGG + chr6_2:9512836-9512855 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + chr6_2:9512921-9512940 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + chr6_2:9512982-9513001 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - chr6_2:9512980-9512999 Msa0908270:CDS 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + chr6_2:9512990-9513009 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + chr6_2:9513013-9513032 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + chr6_2:9513021-9513040 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + chr6_2:9513022-9513041 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + chr6_2:9513031-9513050 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - chr6_2:9513032-9513051 Msa0908270:intron 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - chr6_2:9513033-9513052 Msa0908270:intron 55.0%
GTCTACCTGAGACTGTCCCT+TGG - chr6_2:9513078-9513097 Msa0908270:intron 55.0%
ACAGACCAAGGGACAGTCTC+AGG + chr6_2:9513086-9513105 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - chr6_2:9513088-9513107 Msa0908270:intron 55.0%
CCTTGTGCCAGTACAGACCA+AGG + chr6_2:9513098-9513117 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - chr6_2:9513095-9513114 Msa0908270:intron 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + chr6_2:9513172-9513191 None:intergenic 55.0%
TTCTGGTGTCCTAGGCGTAG+AGG + chr6_2:9512079-9512098 None:intergenic 55.0%
CCCCCATCCCTTGAATAGCT+AGG + chr6_2:9512211-9512230 None:intergenic 55.0%
ATTCAAGGGATGGGGGACAG+AGG - chr6_2:9512215-9512234 Msa0908270:CDS 55.0%
! GCTGAGGCATCCTAACAGAC+CGG + chr6_2:9512339-9512358 None:intergenic 55.0%
TTCTTTGCTCCATCCCCGCA+GGG - chr6_2:9512446-9512465 Msa0908270:CDS 55.0%
! CGCTGTTTCGGCTGTGATAC+CGG - chr6_2:9512482-9512501 Msa0908270:CDS 55.0%
TGTTTCGGCTGTGATACCGG+AGG - chr6_2:9512485-9512504 Msa0908270:CDS 55.0%
!! GAGAGCACTCATCTTGGGGT+GGG - chr6_2:9512528-9512547 Msa0908270:CDS 55.0%
AAACGCTGGGTAGCCAAGTG+CGG + chr6_2:9512588-9512607 None:intergenic 55.0%
TCGTGCCAACGGTAAACGCT+GGG + chr6_2:9512601-9512620 None:intergenic 55.0%
ATCGTGCCAACGGTAAACGC+TGG + chr6_2:9512602-9512621 None:intergenic 55.0%
CACGATAACTGGCACACCAG+AGG - chr6_2:9512616-9512635 Msa0908270:intron 55.0%
TTCCCGGTCCTCTCGTACTA+GGG - chr6_2:9512646-9512665 Msa0908270:intron 55.0%
TTCCCTAGTACGAGAGGACC+GGG + chr6_2:9512651-9512670 None:intergenic 55.0%
GGTCCTCTCGTACTAGGGAA+AGG - chr6_2:9512651-9512670 Msa0908270:intron 55.0%
GGACCTTTCCCTAGTACGAG+AGG + chr6_2:9512657-9512676 None:intergenic 55.0%
!! GTGGGCGTTAGAGCATTGAG+AGG + chr6_2:9512678-9512697 None:intergenic 55.0%
CAATGCTCTAACGCCCACAC+CGG - chr6_2:9512680-9512699 Msa0908270:intron 55.0%
TCTAACGCCCACACCGGATA+TGG - chr6_2:9512686-9512705 Msa0908270:intron 55.0%
GTTCGGTCCATATCCGGTGT+GGG + chr6_2:9512696-9512715 None:intergenic 55.0%
AGTTCGGTCCATATCCGGTG+TGG + chr6_2:9512697-9512716 None:intergenic 55.0%
GGGCTGTTCGCCCATTAAAG+CGG + chr6_2:9512751-9512770 None:intergenic 55.0%
CTCACATCGACGGGAAGGTT+TGG + chr6_2:9512826-9512845 None:intergenic 55.0%
AAGAGCTCACATCGACGGGA+AGG + chr6_2:9512831-9512850 None:intergenic 55.0%
TTCCCGTCGATGTGAGCTCT+TGG - chr6_2:9512830-9512849 Msa0908270:intron 55.0%
TCCCGTCGATGTGAGCTCTT+GGG - chr6_2:9512831-9512850 Msa0908270:intron 55.0%
TCCCCAAGAGCTCACATCGA+CGG + chr6_2:9512836-9512855 None:intergenic 55.0%
AGTCGGCCTTAGTGATCCGA+CGG + chr6_2:9512921-9512940 None:intergenic 55.0%
CCTCGAGTGCAAAGGCAGAA+GGG + chr6_2:9512982-9513001 None:intergenic 55.0%
CCTTCTGCCTTTGCACTCGA+GGG - chr6_2:9512980-9512999 Msa0908270:CDS 55.0%
! AGATTGGCCCTCGAGTGCAA+AGG + chr6_2:9512990-9513009 None:intergenic 55.0%
AAAGGTTTCCTCGGGCCAGA+CGG + chr6_2:9513013-9513032 None:intergenic 55.0%
AGGCGTGCAAAGGTTTCCTC+GGG + chr6_2:9513021-9513040 None:intergenic 55.0%
GAGGCGTGCAAAGGTTTCCT+CGG + chr6_2:9513022-9513041 None:intergenic 55.0%
!! AAGGTAACGGAGGCGTGCAA+AGG + chr6_2:9513031-9513050 None:intergenic 55.0%
! TGCACGCCTCCGTTACCTTT+TGG - chr6_2:9513032-9513051 Msa0908270:intron 55.0%
! GCACGCCTCCGTTACCTTTT+GGG - chr6_2:9513033-9513052 Msa0908270:intron 55.0%
GTCTACCTGAGACTGTCCCT+TGG - chr6_2:9513078-9513097 Msa0908270:intron 55.0%
ACAGACCAAGGGACAGTCTC+AGG + chr6_2:9513086-9513105 None:intergenic 55.0%
GACTGTCCCTTGGTCTGTAC+TGG - chr6_2:9513088-9513107 Msa0908270:intron 55.0%
CCTTGTGCCAGTACAGACCA+AGG + chr6_2:9513098-9513117 None:intergenic 55.0%
! CCTTGGTCTGTACTGGCACA+AGG - chr6_2:9513095-9513114 Msa0908270:intron 55.0%
AGGCAAAGAAGGCCTCCTTC+CGG + chr6_2:9513172-9513191 None:intergenic 55.0%
GGTGTGGTTCCTCTACGCCT+AGG - chr6_2:9512067-9512086 Msa0908270:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG + chr6_2:9512188-9512207 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + chr6_2:9512195-9512214 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - chr6_2:9512221-9512240 Msa0908270:CDS 60.0%
CTTCTTTGCTCCATCCCCGC+AGG - chr6_2:9512445-9512464 Msa0908270:CDS 60.0%
TCTTTGCTCCATCCCCGCAG+GGG - chr6_2:9512447-9512466 Msa0908270:CDS 60.0%
GCTGTGATACCGGAGGCTCT+GGG - chr6_2:9512492-9512511 Msa0908270:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - chr6_2:9512493-9512512 Msa0908270:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG - chr6_2:9512506-9512525 Msa0908270:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - chr6_2:9512527-9512546 Msa0908270:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - chr6_2:9512572-9512591 Msa0908270:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - chr6_2:9512593-9512612 Msa0908270:intron 60.0%
CTAGTACGAGAGGACCGGGA+AGG + chr6_2:9512647-9512666 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - chr6_2:9512645-9512664 Msa0908270:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + chr6_2:9512835-9512854 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - chr6_2:9512832-9512851 Msa0908270:intron 60.0%
TCGGCACCGTCGGATCACTA+AGG - chr6_2:9512912-9512931 Msa0908270:intron 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + chr6_2:9512938-9512957 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - chr6_2:9512936-9512955 Msa0908270:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - chr6_2:9512937-9512956 Msa0908270:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - chr6_2:9512979-9512998 Msa0908270:CDS 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + chr6_2:9512983-9513002 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - chr6_2:9513036-9513055 Msa0908270:intron 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + chr6_2:9513041-9513060 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + chr6_2:9513168-9513187 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + chr6_2:9513169-9513188 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + chr6_2:9513170-9513189 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + chr6_2:9513171-9513190 None:intergenic 60.0%
GGTGTGGTTCCTCTACGCCT+AGG - chr6_2:9512067-9512086 Msa0908270:CDS 60.0%
GATGGAAGGGCAGAGGCCTT+TGG + chr6_2:9512188-9512207 None:intergenic 60.0%
AGCTAGGGATGGAAGGGCAG+AGG + chr6_2:9512195-9512214 None:intergenic 60.0%
! GGGATGGGGGACAGAGGTTT+TGG - chr6_2:9512221-9512240 Msa0908270:CDS 60.0%
CTTCTTTGCTCCATCCCCGC+AGG - chr6_2:9512445-9512464 Msa0908270:CDS 60.0%
TCTTTGCTCCATCCCCGCAG+GGG - chr6_2:9512447-9512466 Msa0908270:CDS 60.0%
GCTGTGATACCGGAGGCTCT+GGG - chr6_2:9512492-9512511 Msa0908270:CDS 60.0%
CTGTGATACCGGAGGCTCTG+GGG - chr6_2:9512493-9512512 Msa0908270:CDS 60.0%
!! GGCTCTGGGGAAGTCGGAAT+AGG - chr6_2:9512506-9512525 Msa0908270:CDS 60.0%
!! GGAGAGCACTCATCTTGGGG+TGG - chr6_2:9512527-9512546 Msa0908270:CDS 60.0%
GCAGTTATCCGCTCCGCACT+TGG - chr6_2:9512572-9512591 Msa0908270:CDS 60.0%
GGCTACCCAGCGTTTACCGT+TGG - chr6_2:9512593-9512612 Msa0908270:intron 60.0%
CTAGTACGAGAGGACCGGGA+AGG + chr6_2:9512647-9512666 None:intergenic 60.0%
CTTCCCGGTCCTCTCGTACT+AGG - chr6_2:9512645-9512664 Msa0908270:intron 60.0%
CCCCAAGAGCTCACATCGAC+GGG + chr6_2:9512835-9512854 None:intergenic 60.0%
CCCGTCGATGTGAGCTCTTG+GGG - chr6_2:9512832-9512851 Msa0908270:intron 60.0%
TCGGCACCGTCGGATCACTA+AGG - chr6_2:9512912-9512931 Msa0908270:intron 60.0%
CGTCGAGCAGGGACGAAAGT+CGG + chr6_2:9512938-9512957 None:intergenic 60.0%
CGACTTTCGTCCCTGCTCGA+CGG - chr6_2:9512936-9512955 Msa0908270:intron 60.0%
GACTTTCGTCCCTGCTCGAC+GGG - chr6_2:9512937-9512956 Msa0908270:intron 60.0%
CCCTTCTGCCTTTGCACTCG+AGG - chr6_2:9512979-9512998 Msa0908270:CDS 60.0%
CCCTCGAGTGCAAAGGCAGA+AGG + chr6_2:9512983-9513002 None:intergenic 60.0%
! CGCCTCCGTTACCTTTTGGG+AGG - chr6_2:9513036-9513055 Msa0908270:intron 60.0%
! GGCCTCCCAAAAGGTAACGG+AGG + chr6_2:9513041-9513060 None:intergenic 60.0%
AAAGAAGGCCTCCTTCCGGG+GGG + chr6_2:9513168-9513187 None:intergenic 60.0%
CAAAGAAGGCCTCCTTCCGG+GGG + chr6_2:9513169-9513188 None:intergenic 60.0%
GCAAAGAAGGCCTCCTTCCG+GGG + chr6_2:9513170-9513189 None:intergenic 60.0%
GGCAAAGAAGGCCTCCTTCC+GGG + chr6_2:9513171-9513190 None:intergenic 60.0%
ATGGGTTCTCTGCCCCTGCG+GGG + chr6_2:9512462-9512481 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + chr6_2:9512463-9512482 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + chr6_2:9512464-9512483 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - chr6_2:9512491-9512510 Msa0908270:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - chr6_2:9512500-9512519 Msa0908270:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + chr6_2:9512504-9512523 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + chr6_2:9512583-9512602 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - chr6_2:9512630-9512649 Msa0908270:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - chr6_2:9512757-9512776 Msa0908270:CDS 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + chr6_2:9512797-9512816 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - chr6_2:9512798-9512817 Msa0908270:intron 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG + chr6_2:9512892-9512911 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG - chr6_2:9512893-9512912 Msa0908270:intron 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG + chr6_2:9512906-9512925 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG + chr6_2:9512907-9512926 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG + chr6_2:9512911-9512930 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - chr6_2:9512940-9512959 Msa0908270:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - chr6_2:9512941-9512960 Msa0908270:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG + chr6_2:9512949-9512968 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - chr6_2:9512995-9513014 Msa0908270:CDS 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + chr6_2:9513006-9513025 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + chr6_2:9513050-9513069 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG + chr6_2:9513167-9513186 None:intergenic 65.0%
ATGGGTTCTCTGCCCCTGCG+GGG + chr6_2:9512462-9512481 None:intergenic 65.0%
! GATGGGTTCTCTGCCCCTGC+GGG + chr6_2:9512463-9512482 None:intergenic 65.0%
! CGATGGGTTCTCTGCCCCTG+CGG + chr6_2:9512464-9512483 None:intergenic 65.0%
GGCTGTGATACCGGAGGCTC+TGG - chr6_2:9512491-9512510 Msa0908270:CDS 65.0%
!! ACCGGAGGCTCTGGGGAAGT+CGG - chr6_2:9512500-9512519 Msa0908270:CDS 65.0%
TCCGACTTCCCCAGAGCCTC+CGG + chr6_2:9512504-9512523 None:intergenic 65.0%
CTGGGTAGCCAAGTGCGGAG+CGG + chr6_2:9512583-9512602 None:intergenic 65.0%
! CACCAGAGGTGCGTCCTTCC+CGG - chr6_2:9512630-9512649 Msa0908270:intron 65.0%
TGGGCGAACAGCCCAACCCT+TGG - chr6_2:9512757-9512776 Msa0908270:CDS 65.0%
!! GATGTCGGCTCTTCGCCACC+TGG + chr6_2:9512797-9512816 None:intergenic 65.0%
GTGGCGAAGAGCCGACATCG+AGG - chr6_2:9512798-9512817 Msa0908270:intron 65.0%
GTGGAAGGGCCGTCGCTCAA+CGG + chr6_2:9512892-9512911 None:intergenic 65.0%
TGAGCGACGGCCCTTCCACT+CGG - chr6_2:9512893-9512912 Msa0908270:intron 65.0%
! TCCGACGGTGCCGAGTGGAA+GGG + chr6_2:9512906-9512925 None:intergenic 65.0%
! ATCCGACGGTGCCGAGTGGA+AGG + chr6_2:9512907-9512926 None:intergenic 65.0%
! AGTGATCCGACGGTGCCGAG+TGG + chr6_2:9512911-9512930 None:intergenic 65.0%
TTTCGTCCCTGCTCGACGGG+TGG - chr6_2:9512940-9512959 Msa0908270:intron 65.0%
TTCGTCCCTGCTCGACGGGT+GGG - chr6_2:9512941-9512960 Msa0908270:intron 65.0%
CAAGACCCACCCGTCGAGCA+GGG + chr6_2:9512949-9512968 None:intergenic 65.0%
CTCGAGGGCCAATCTCCGTC+TGG - chr6_2:9512995-9513014 Msa0908270:CDS 65.0%
TCCTCGGGCCAGACGGAGAT+TGG + chr6_2:9513006-9513025 None:intergenic 65.0%
TGGGGCGTAGGCCTCCCAAA+AGG + chr6_2:9513050-9513069 None:intergenic 65.0%
AAGAAGGCCTCCTTCCGGGG+GGG + chr6_2:9513167-9513186 None:intergenic 65.0%
GTTCTCTGCCCCTGCGGGGA+TGG + chr6_2:9512458-9512477 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + chr6_2:9512635-9512654 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG - chr6_2:9512902-9512921 Msa0908270:intron 70.0%
GCAAGACCCACCCGTCGAGC+AGG + chr6_2:9512950-9512969 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - chr6_2:9513002-9513021 Msa0908270:CDS 70.0%
ACTGATGGCTCGAGCCCCCC+CGG - chr6_2:9513150-9513169 Msa0908270:CDS 70.0%
GTTCTCTGCCCCTGCGGGGA+TGG + chr6_2:9512458-9512477 None:intergenic 70.0%
GACCGGGAAGGACGCACCTC+TGG + chr6_2:9512635-9512654 None:intergenic 70.0%
GCCCTTCCACTCGGCACCGT+CGG - chr6_2:9512902-9512921 Msa0908270:intron 70.0%
GCAAGACCCACCCGTCGAGC+AGG + chr6_2:9512950-9512969 None:intergenic 70.0%
GCCAATCTCCGTCTGGCCCG+AGG - chr6_2:9513002-9513021 Msa0908270:CDS 70.0%
ACTGATGGCTCGAGCCCCCC+CGG - chr6_2:9513150-9513169 Msa0908270:CDS 70.0%
ATGGCTCGAGCCCCCCCGGA+AGG - chr6_2:9513154-9513173 Msa0908270:CDS 75.0%
ATGGCTCGAGCCCCCCCGGA+AGG - chr6_2:9513154-9513173 Msa0908270:CDS 75.0%
! GCTCGAGCCCCCCCGGAAGG+AGG - chr6_2:9513157-9513176 Msa0908270:CDS 80.0%
! GCTCGAGCCCCCCCGGAAGG+AGG - chr6_2:9513157-9513176 Msa0908270:CDS 80.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 9512060 9513200 9512060 ID=Msa0908270;Name=Msa0908270
chr6_2 mRNA 9512060 9513200 9512060 ID=Msa0908270-mRNA-1;Parent=Msa0908270;Name=Msa0908270-mRNA-1;_AED=0.59;_eAED=0.60;_QI=0|0|0|0.6|1|1|5|0|223
chr6_2 exon 9513144 9513200 9513144 ID=Msa0908270-mRNA-1:exon:2309;Parent=Msa0908270-mRNA-1
chr6_2 exon 9512952 9513047 9512952 ID=Msa0908270-mRNA-1:exon:2308;Parent=Msa0908270-mRNA-1
chr6_2 exon 9512715 9512793 9512715 ID=Msa0908270-mRNA-1:exon:2307;Parent=Msa0908270-mRNA-1
chr6_2 exon 9512383 9512593 9512383 ID=Msa0908270-mRNA-1:exon:2306;Parent=Msa0908270-mRNA-1
chr6_2 exon 9512060 9512288 9512060 ID=Msa0908270-mRNA-1:exon:2305;Parent=Msa0908270-mRNA-1
chr6_2 CDS 9513144 9513200 9513144 ID=Msa0908270-mRNA-1:cds;Parent=Msa0908270-mRNA-1
chr6_2 CDS 9512952 9513047 9512952 ID=Msa0908270-mRNA-1:cds;Parent=Msa0908270-mRNA-1
chr6_2 CDS 9512715 9512793 9512715 ID=Msa0908270-mRNA-1:cds;Parent=Msa0908270-mRNA-1
chr6_2 CDS 9512383 9512593 9512383 ID=Msa0908270-mRNA-1:cds;Parent=Msa0908270-mRNA-1
chr6_2 CDS 9512060 9512288 9512060 ID=Msa0908270-mRNA-1:cds;Parent=Msa0908270-mRNA-1
Gene Sequence

>Msa0908270

ATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAATATCGAACCATGAACGAACTATTCAAGGGATGGGGGACAGAGGTTTTGGTTTTTCATGTTGTCAAAGAGTTGAACAATCAAAATAGATGGCGATTGCCTGATCGAATTGATCAGGGGCAGAGAACCCATCGCTGTTTCGGCTGTGATACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCTCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGATCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCTGGCCCGAGGAAACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGTCTGTACTGGCACAAGGTTAGAATTCTAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGAGCCCCCCCGGAAGGAGGCCTTCTTTGCCTTCCACCTAA

Protein sequence

>Msa0908270

MDWCGSSTPRTPEYRTMNELFKGWGTEVLVFHVVKELNNQNRWRLPDRIDQGQRTHRCFGCDTGGSGEVGIGEHSSWGKGPLNALTPTPDMDRTVSRRSEPSSRTALMGEQPNPWNILQLQVAKSRHRGAKPSRRCELLGKISLLSLDQAPFCLCTRGPISVWPEETFARLRYLLGGLRPIETVYLRLSLGLYWHKVRILALPEWYLTDGSSPPGRRPSLPST*