AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1389820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1389820 MtrunA17_Chr1g0202431 98.361 610 9 1 1 609 1 610 0.0 1215
Msa1389820 MtrunA17_Chr4g0065231 47.642 615 289 12 12 607 41 641 0.0 537
Msa1389820 MtrunA17_Chr2g0316301 43.186 609 321 10 13 608 39 635 2.89e-165 486
Msa1389820 MtrunA17_Chr8g0384391 42.404 599 306 10 40 606 48 639 2.46e-159 471
Msa1389820 MtrunA17_Chr3g0130331 43.508 593 298 9 48 609 56 642 3.43e-155 460
Msa1389820 MtrunA17_Chr7g0263351 31.988 669 372 15 10 601 80 742 1.13e-105 335
Msa1389820 MtrunA17_Chr1g0213091 32.063 630 345 12 50 601 122 746 1.89e-99 319
Msa1389820 MtrunA17_Chr4g0050251 29.630 594 372 17 50 608 73 655 2.26e-64 224
Msa1389820 MtrunA17_Chr4g0050291 29.293 594 376 16 50 608 50 634 1.68e-63 221
Msa1389820 MtrunA17_Chr4g0050221 29.402 602 360 18 50 608 31 610 1.05e-62 218
Msa1389820 MtrunA17_Chr6g0477811 28.788 594 367 12 50 600 66 646 6.97e-62 217
Msa1389820 MtrunA17_Chr4g0039251 29.883 512 316 9 46 519 89 595 7.01e-58 207
Msa1389820 MtrunA17_Chr1g0200651 30.551 599 358 16 45 602 85 666 1.88e-57 204
Msa1389820 MtrunA17_Chr1g0198931 29.430 632 390 18 5 602 68 677 3.25e-56 201
Msa1389820 MtrunA17_Chr4g0039261 27.692 585 367 16 60 600 61 633 1.25e-54 197
Msa1389820 MtrunA17_Chr5g0408061 28.428 598 360 17 50 604 65 637 1.33e-54 196
Msa1389820 MtrunA17_Chr1g0208391 27.894 527 341 12 49 545 92 609 1.47e-52 192
Msa1389820 MtrunA17_Chr1g0176451 27.407 540 333 11 40 534 13 538 3.57e-52 188
Msa1389820 MtrunA17_Chr3g0093331 44.053 227 114 4 70 285 18 242 6.68e-52 179
Msa1389820 MtrunA17_Chr1g0176441 26.547 614 364 18 40 602 161 738 3.73e-50 185
Msa1389820 MtrunA17_Chr8g0359931 27.441 594 371 16 43 602 59 626 6.54e-50 183
Msa1389820 MtrunA17_Chr3g0104621 26.705 528 345 14 50 543 764 1283 2.76e-49 185
Msa1389820 MtrunA17_Chr3g0104621 22.833 600 398 13 50 592 56 647 7.88e-38 150
Msa1389820 MtrunA17_Chr8g0393191 39.216 255 140 6 49 290 68 320 6.43e-49 182
Msa1389820 MtrunA17_Chr8g0393191 27.517 298 187 6 325 600 518 808 3.54e-29 123
Msa1389820 MtrunA17_Chr1g0171351 27.573 515 347 12 50 541 894 1405 7.09e-49 184
Msa1389820 MtrunA17_Chr1g0171351 22.742 620 399 16 50 601 176 783 1.47e-36 146
Msa1389820 MtrunA17_Chr7g0267971 28.755 546 331 15 37 534 147 682 6.54e-48 179
Msa1389820 MtrunA17_Chr5g0429871 25.849 530 355 14 50 550 667 1187 1.51e-47 179
Msa1389820 MtrunA17_Chr5g0429871 22.222 576 378 14 86 600 17 583 1.92e-33 137
Msa1389820 MtrunA17_Chr4g0003981 24.813 536 370 14 50 559 866 1394 2.12e-47 179
Msa1389820 MtrunA17_Chr4g0003981 22.967 627 385 17 50 600 173 777 1.99e-32 134
Msa1389820 MtrunA17_Chr7g0262231 26.604 530 341 16 50 545 883 1398 5.26e-47 178
Msa1389820 MtrunA17_Chr7g0262231 21.635 624 417 14 41 600 151 766 3.68e-34 139
Msa1389820 MtrunA17_Chr5g0446901 28.600 507 306 14 50 513 109 602 8.56e-47 174
Msa1389820 MtrunA17_Chr7g0262251 26.580 538 341 16 50 543 827 1354 1.46e-46 177
Msa1389820 MtrunA17_Chr7g0262251 24.633 613 374 16 50 600 175 761 9.29e-37 147
Msa1389820 MtrunA17_Chr8g0340651 26.136 528 340 13 50 542 905 1417 1.57e-46 177
Msa1389820 MtrunA17_Chr8g0340651 23.296 631 382 15 50 601 178 785 6.14e-36 144
Msa1389820 MtrunA17_Chr1g0198291 27.129 505 332 13 50 526 894 1390 6.35e-46 175
Msa1389820 MtrunA17_Chr1g0198291 23.425 619 396 18 50 601 189 796 1.20e-33 137
Msa1389820 MtrunA17_Chr3g0102731 30.118 508 293 17 50 513 98 587 3.37e-45 169
Msa1389820 MtrunA17_Chr7g0262241 26.226 530 339 15 50 543 880 1393 3.94e-45 172
Msa1389820 MtrunA17_Chr7g0262241 20.960 625 420 15 41 600 151 766 4.09e-33 136
Msa1389820 MtrunA17_Chr7g0261971 26.960 523 344 15 50 543 875 1388 4.86e-45 172
Msa1389820 MtrunA17_Chr7g0261971 21.622 555 368 12 50 542 158 707 9.83e-33 135
Msa1389820 MtrunA17_Chr2g0332221 24.112 535 352 15 50 547 855 1372 1.04e-44 171
Msa1389820 MtrunA17_Chr2g0332221 24.149 646 388 19 25 594 142 761 3.03e-40 157
Msa1389820 MtrunA17_Chr4g0026731 25.771 551 354 12 109 608 38 584 1.73e-44 167
Msa1389820 MtrunA17_Chr4g0050201 28.785 535 332 15 108 608 20 539 2.79e-44 166
Msa1389820 MtrunA17_Chr1g0148841 25.427 527 347 11 50 543 877 1390 2.94e-44 170
Msa1389820 MtrunA17_Chr1g0148841 23.713 641 403 17 31 600 145 770 2.42e-38 152
Msa1389820 MtrunA17_Chr0c20g0493841 25.823 577 387 16 14 551 805 1379 3.00e-44 170
Msa1389820 MtrunA17_Chr0c20g0493841 23.833 621 385 16 50 600 168 770 2.29e-39 155
Msa1389820 MtrunA17_Chr7g0261951 26.857 525 346 15 50 545 879 1394 1.44e-43 168
Msa1389820 MtrunA17_Chr7g0261951 22.785 553 364 11 50 542 162 711 8.33e-35 141
Msa1389820 MtrunA17_Chr2g0332241 23.925 535 353 15 50 547 856 1373 1.64e-43 167
Msa1389820 MtrunA17_Chr2g0332241 24.224 644 385 20 25 591 142 759 6.16e-39 154
Msa1389820 MtrunA17_Chr2g0331081 24.806 516 362 12 50 542 891 1403 1.84e-43 167
Msa1389820 MtrunA17_Chr2g0331081 23.501 617 396 16 50 601 179 784 1.03e-35 144
Msa1389820 MtrunA17_Chr5g0411621 39.024 246 140 6 50 287 51 294 2.57e-43 165
Msa1389820 MtrunA17_Chr5g0411621 36.364 286 170 5 325 608 450 725 5.68e-42 161
Msa1389820 MtrunA17_Chr2g0332211 23.551 535 355 14 50 547 939 1456 5.10e-43 166
Msa1389820 MtrunA17_Chr2g0332211 24.441 626 380 20 39 591 235 840 1.81e-39 155
Msa1389820 MtrunA17_Chr3g0138261 26.046 526 355 14 50 548 870 1388 1.24e-42 165
Msa1389820 MtrunA17_Chr3g0138261 23.548 637 393 18 36 597 150 767 6.17e-36 144
Msa1389820 MtrunA17_Chr4g0003971 24.673 535 345 18 50 545 825 1340 1.53e-42 164
Msa1389820 MtrunA17_Chr4g0003971 24.191 649 384 18 40 609 157 776 1.11e-36 147
Msa1389820 MtrunA17_Chr7g0265981 25.926 540 344 14 50 551 883 1404 1.03e-41 162
Msa1389820 MtrunA17_Chr7g0265981 23.252 615 401 15 50 600 184 791 4.30e-31 129
Msa1389820 MtrunA17_Chr7g0265991 25.771 551 342 16 50 551 59 591 1.82e-41 159
Msa1389820 MtrunA17_Chr7g0262261 24.954 549 350 15 50 551 803 1336 4.78e-41 160
Msa1389820 MtrunA17_Chr7g0262261 23.671 621 388 17 50 600 133 737 1.18e-33 137
Msa1389820 MtrunA17_Chr1g0148811 27.547 530 332 20 50 543 854 1367 7.91e-41 159
Msa1389820 MtrunA17_Chr1g0148811 23.557 641 389 16 44 603 146 766 5.25e-33 135
Msa1389820 MtrunA17_Chr4g0062871 24.710 518 362 11 50 543 844 1357 9.74e-41 159
Msa1389820 MtrunA17_Chr4g0062871 22.134 628 408 17 50 608 150 765 8.04e-29 122
Msa1389820 MtrunA17_Chr7g0262221 25.281 534 350 16 50 543 854 1378 4.03e-40 157
Msa1389820 MtrunA17_Chr7g0262221 21.198 651 422 16 41 609 152 793 8.27e-31 129
Msa1389820 MtrunA17_Chr4g0039231 25.100 498 280 7 110 519 20 512 1.17e-39 154
Msa1389820 MtrunA17_Chr2g0318061 35.317 252 152 5 38 281 19 267 1.29e-38 146
Msa1389820 MtrunA17_Chr7g0265971 25.632 554 342 16 50 551 875 1410 2.53e-38 152
Msa1389820 MtrunA17_Chr7g0265971 23.490 596 379 13 50 579 178 762 2.05e-37 149
Msa1389820 MtrunA17_Chr7g0266001 23.794 622 389 15 50 600 63 670 2.68e-36 144
Msa1389820 MtrunA17_Chr7g0261981 25.520 529 318 19 50 543 861 1348 3.99e-36 145
Msa1389820 MtrunA17_Chr7g0261981 22.163 564 374 12 41 542 151 711 5.10e-34 139
Msa1389820 MtrunA17_Chr1g0199471 35.628 247 137 7 49 280 516 755 8.30e-35 141
Msa1389820 MtrunA17_Chr2g0327241 25.539 603 395 18 48 609 124 713 2.56e-34 139
Msa1389820 MtrunA17_Chr4g0069211 23.654 613 385 17 50 600 167 758 1.25e-33 137
Msa1389820 MtrunA17_Chr4g0069211 33.730 252 137 10 14 238 793 1041 2.43e-26 114
Msa1389820 MtrunA17_Chr7g0265961 21.732 612 402 11 50 600 182 777 1.29e-33 137
Msa1389820 MtrunA17_Chr7g0265961 24.466 515 346 14 50 541 831 1325 1.63e-33 137
Msa1389820 MtrunA17_Chr7g0264441 26.482 506 288 18 48 484 277 767 4.21e-33 135
Msa1389820 MtrunA17_Chr4g0004021 26.190 420 256 13 50 432 863 1265 1.27e-32 134
Msa1389820 MtrunA17_Chr4g0004021 22.907 633 392 19 40 600 167 775 1.81e-32 134
Msa1389820 MtrunA17_Chr4g0050261 37.295 244 140 5 50 282 73 314 1.48e-32 133
Msa1389820 MtrunA17_Chr4g0050261 28.916 249 165 7 366 608 454 696 3.46e-25 110
Msa1389820 MtrunA17_Chr1g0180971 31.395 258 165 6 49 296 412 667 2.25e-30 127
Msa1389820 MtrunA17_Chr7g0262321 23.810 525 352 15 50 545 568 1073 4.67e-27 117
Msa1389820 MtrunA17_Chr7g0262321 21.888 466 323 12 166 600 41 496 1.97e-20 96.3
Msa1389820 MtrunA17_Chr4g0028621 31.174 247 154 5 49 283 506 748 5.23e-26 114
Msa1389820 MtrunA17_Chr6g0472481 32.828 198 122 5 50 238 13 208 1.26e-25 106
Msa1389820 MtrunA17_Chr7g0215001 24.672 381 223 14 190 521 1 366 1.37e-20 94.0
Msa1389820 MtrunA17_Chr5g0412741 30.180 222 137 6 41 251 464 678 1.42e-19 93.2
Msa1389820 MtrunA17_Chr3g0132711 30.000 220 145 5 42 257 201 415 4.60e-19 91.3
Msa1389820 MtrunA17_Chr7g0257341 35.570 149 94 2 51 198 573 720 1.30e-18 90.5
Msa1389820 MtrunA17_Chr7g0257341 32.215 149 99 2 51 198 1479 1626 1.30e-16 84.3
Msa1389820 MtrunA17_Chr5g0433051 31.746 252 140 9 50 291 481 710 1.77e-18 89.7
Msa1389820 MtrunA17_Chr6g0451911 33.632 223 133 10 44 257 1025 1241 4.24e-18 89.0
Msa1389820 MtrunA17_Chr6g0451911 28.440 218 141 6 46 255 374 584 1.31e-13 74.3
Msa1389820 MtrunA17_Chr6g0452171 33.333 231 124 10 44 257 1030 1247 6.66e-18 88.2
Msa1389820 MtrunA17_Chr6g0452171 28.704 216 143 6 46 255 374 584 7.66e-13 72.0
Msa1389820 MtrunA17_Chr1g0180601 29.412 221 140 7 44 255 1065 1278 7.41e-18 88.2
Msa1389820 MtrunA17_Chr1g0180601 29.439 214 136 6 46 251 412 618 1.70e-12 70.9
Msa1389820 MtrunA17_Chr6g0452111 33.921 227 128 10 44 257 1028 1245 1.24e-17 87.4
Msa1389820 MtrunA17_Chr6g0452111 29.358 218 139 6 46 255 381 591 2.53e-13 73.6
Msa1389820 MtrunA17_Chr3g0093091 26.033 242 169 5 45 279 632 870 1.70e-17 86.7
Msa1389820 MtrunA17_Chr3g0130211 28.700 223 147 5 49 271 54 264 2.13e-17 82.8
Msa1389820 MtrunA17_Chr4g0041871 29.289 239 151 7 46 276 1019 1247 3.08e-17 86.3
Msa1389820 MtrunA17_Chr4g0041871 28.111 217 144 7 42 251 351 562 5.34e-14 75.9
Msa1389820 MtrunA17_Chr7g0227391 30.734 218 130 6 50 255 442 650 3.33e-17 85.5
Msa1389820 MtrunA17_Chr3g0093041 28.507 221 149 5 41 257 186 401 3.76e-17 85.1
Msa1389820 MtrunA17_Chr6g0452071 33.772 228 129 10 44 258 223 441 4.78e-17 84.0
Msa1389820 MtrunA17_Chr6g0452061 33.480 227 129 10 44 257 539 756 5.52e-17 85.1
Msa1389820 MtrunA17_Chr6g0452141 33.772 228 129 10 44 258 1027 1245 6.35e-17 85.1
Msa1389820 MtrunA17_Chr6g0452141 28.899 218 140 6 46 255 375 585 9.65e-13 71.6
Msa1389820 MtrunA17_Chr1g0178481 31.481 216 129 8 39 244 387 593 1.36e-16 83.6
Msa1389820 MtrunA17_Chr8g0390471 42.857 98 53 2 47 142 2 98 1.37e-16 75.9
Msa1389820 MtrunA17_Chr6g0451881 33.480 227 129 10 44 257 1017 1234 1.40e-16 84.0
Msa1389820 MtrunA17_Chr6g0451881 28.899 218 140 6 46 255 374 584 4.80e-13 72.8
Msa1389820 MtrunA17_Chr6g0452041 33.480 227 129 10 44 257 1029 1246 1.66e-16 84.0
Msa1389820 MtrunA17_Chr6g0452041 29.358 218 139 6 46 255 374 584 2.80e-13 73.6
Msa1389820 MtrunA17_Chr4g0061601 28.311 219 138 8 44 251 397 607 2.20e-16 82.8
Msa1389820 MtrunA17_Chr5g0433071 30.859 256 142 11 50 294 483 714 2.50e-16 82.8
Msa1389820 MtrunA17_Chr8g0341811 28.846 260 152 11 51 302 455 689 4.44e-16 82.4
Msa1389820 MtrunA17_Chr5g0410921 30.455 220 139 6 44 255 999 1212 7.17e-16 81.6
Msa1389820 MtrunA17_Chr5g0410921 28.829 222 144 8 44 257 366 581 2.18e-13 73.6
Msa1389820 MtrunA17_Chr4g0039821 30.612 245 133 11 39 263 1036 1263 1.10e-15 81.3
Msa1389820 MtrunA17_Chr4g0039821 28.251 223 140 9 44 255 386 599 6.51e-13 72.4
Msa1389820 MtrunA17_Chr3g0123411 29.817 218 138 6 46 255 918 1128 1.50e-15 80.5
Msa1389820 MtrunA17_Chr3g0123411 30.921 152 99 3 162 311 383 530 2.76e-11 67.0
Msa1389820 MtrunA17_Chr4g0069411 29.694 229 133 9 39 250 1052 1269 1.56e-15 80.5
Msa1389820 MtrunA17_Chr4g0069411 29.545 220 141 8 44 255 406 619 1.31e-13 74.3
Msa1389820 MtrunA17_Chr7g0264631 27.602 221 144 7 44 255 1091 1304 4.58e-15 79.3
Msa1389820 MtrunA17_Chr7g0264631 30.088 226 139 7 46 263 439 653 4.40e-13 72.8
Msa1389820 MtrunA17_Chr7g0233901 30.531 226 134 9 44 255 1005 1221 7.42e-15 78.6
Msa1389820 MtrunA17_Chr7g0233901 28.511 235 154 8 30 255 351 580 1.07e-13 74.7
Msa1389820 MtrunA17_Chr4g0060431 27.477 222 156 4 38 257 605 823 7.93e-15 78.2
Msa1389820 MtrunA17_Chr4g0060501 24.901 253 183 5 38 288 620 867 1.91e-14 77.0
Msa1389820 MtrunA17_Chr8g0344651 25.869 259 168 8 6 257 582 823 1.95e-14 77.0
Msa1389820 MtrunA17_Chr8g0344651 27.092 251 160 10 39 273 1244 1487 2.68e-11 67.0
Msa1389820 MtrunA17_Chr4g0069351 29.680 219 142 8 44 255 388 601 1.95e-14 77.0
Msa1389820 MtrunA17_Chr4g0069351 28.980 245 137 10 39 263 1038 1265 4.85e-12 69.3
Msa1389820 MtrunA17_Chr4g0060401 27.027 222 157 4 38 257 618 836 2.75e-14 76.6
Msa1389820 MtrunA17_Chr7g0249091 31.111 225 126 7 50 250 100 319 4.08e-14 73.9
Msa1389820 MtrunA17_Chr4g0047831 45.455 77 41 1 166 242 8 83 4.48e-14 68.6
Msa1389820 MtrunA17_Chr8g0341761 28.444 225 130 9 39 255 605 806 4.62e-14 75.9
Msa1389820 MtrunA17_Chr6g0453051 29.515 227 136 9 44 257 1018 1233 4.70e-14 75.9
Msa1389820 MtrunA17_Chr8g0353781 28.000 225 131 9 39 255 608 809 5.83e-14 75.5
Msa1389820 MtrunA17_Chr4g0060421 27.488 211 148 4 38 246 140 347 5.88e-14 74.3
Msa1389820 MtrunA17_Chr3g0138211 28.372 215 142 8 44 251 406 615 5.93e-14 75.5
Msa1389820 MtrunA17_Chr3g0138211 28.916 249 131 11 39 255 1028 1262 1.80e-12 70.9
Msa1389820 MtrunA17_Chr4g0069361 28.829 222 146 8 44 258 388 604 7.27e-14 75.1
Msa1389820 MtrunA17_Chr4g0069361 29.796 245 135 11 39 263 1038 1265 1.46e-13 74.3
Msa1389820 MtrunA17_Chr4g0069401 30.594 219 140 8 44 255 383 596 1.60e-13 74.3
Msa1389820 MtrunA17_Chr4g0069401 28.571 245 138 10 39 263 1036 1263 1.87e-13 73.9
Msa1389820 MtrunA17_Chr8g0341751 27.602 221 129 9 39 251 433 630 1.83e-13 73.9
Msa1389820 MtrunA17_Chr8g0341851 26.667 285 157 12 43 307 621 873 2.17e-13 73.9
Msa1389820 MtrunA17_Chr1g0194001 28.755 233 139 10 37 255 152 371 4.61e-13 71.2
Msa1389820 MtrunA17_Chr3g0128381 29.386 228 134 8 46 255 403 621 5.59e-13 72.0
Msa1389820 MtrunA17_Chr2g0285311 28.767 219 135 7 44 250 1035 1244 6.95e-13 72.0
Msa1389820 MtrunA17_Chr2g0285731 26.027 292 173 10 51 333 633 890 1.01e-12 71.6
Msa1389820 MtrunA17_Chr1g0193991 29.333 225 134 7 39 250 1051 1263 1.68e-12 70.9
Msa1389820 MtrunA17_Chr1g0193991 27.928 222 137 8 46 255 402 612 5.90e-11 65.9
Msa1389820 MtrunA17_Chr4g0060471 27.419 186 120 7 66 244 1 178 6.96e-12 66.6
Msa1389820 MtrunA17_Chr6g0472531 28.910 211 116 9 51 250 589 776 7.34e-12 68.9
Msa1389820 MtrunA17_Chr3g0119381 27.426 237 138 9 39 255 1059 1281 9.19e-12 68.6
Msa1389820 MtrunA17_Chr2g0285191 27.468 233 149 9 29 251 395 617 2.40e-11 67.0
Msa1389820 MtrunA17_Chr6g0481921 27.919 197 131 6 65 255 303 494 2.44e-11 67.0
Msa1389820 MtrunA17_Chr4g0069221 23.256 215 151 4 346 551 115 324 3.36e-11 65.5
Msa1389820 MtrunA17_Chr8g0353541 26.222 225 135 9 39 255 217 418 3.66e-11 66.6
Msa1389820 MtrunA17_Chr6g0463121 27.523 218 124 8 51 257 638 832 3.90e-11 66.6
Msa1389820 MtrunA17_Chr8g0366481 30.317 221 138 6 44 255 396 609 6.44e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1389820 AT5G52860.1 67.594 611 172 7 1 608 1 588 0.0 808
Msa1389820 AT4G25750.1 68.000 600 165 7 11 608 2 576 0.0 798
Msa1389820 AT5G19410.2 44.643 616 290 10 7 607 52 631 6.41e-175 511
Msa1389820 AT5G19410.1 44.643 616 290 10 7 607 43 622 8.89e-175 510
Msa1389820 AT1G53270.1 44.337 618 296 14 6 609 7 590 7.11e-164 481
Msa1389820 AT2G13610.1 42.230 592 309 8 43 606 55 641 4.85e-155 460
Msa1389820 AT3G55090.1 33.067 626 341 11 50 601 107 728 1.52e-105 335
Msa1389820 AT3G55110.1 31.975 638 371 10 24 601 66 700 1.00e-103 330
Msa1389820 AT3G55100.1 31.811 657 382 13 1 601 8 654 1.08e-103 328
Msa1389820 AT3G55100.2 31.811 657 382 13 1 601 8 654 1.08e-103 328
Msa1389820 AT3G55130.1 31.734 646 367 10 25 601 77 717 1.33e-101 324
Msa1389820 AT2G39350.1 30.843 629 353 10 50 601 109 732 8.50e-100 320
Msa1389820 AT2G37360.1 30.992 655 383 14 13 601 96 747 1.55e-97 315
Msa1389820 AT3G53510.1 32.248 614 346 12 50 601 126 731 2.30e-95 308
Msa1389820 AT5G13580.1 30.732 615 360 10 50 601 108 719 9.65e-92 298
Msa1389820 AT3G21090.1 30.050 599 369 16 46 603 41 630 2.64e-64 224
Msa1389820 AT1G17840.1 31.099 537 321 10 50 545 69 597 1.36e-62 220
Msa1389820 AT1G51500.1 29.816 597 369 14 46 600 40 628 8.06e-61 214
Msa1389820 AT3G25620.2 31.171 555 326 15 20 534 73 611 2.09e-58 207
Msa1389820 AT2G01320.8 28.172 536 330 12 48 545 88 606 4.95e-58 206
Msa1389820 AT2G01320.5 28.172 536 330 12 48 545 88 606 4.95e-58 206
Msa1389820 AT2G01320.3 28.224 535 329 12 49 545 89 606 1.30e-57 206
Msa1389820 AT2G01320.2 28.224 535 329 12 49 545 89 606 1.33e-57 206
Msa1389820 AT2G01320.1 28.224 535 329 12 49 545 89 606 1.48e-57 206
Msa1389820 AT2G01320.4 28.224 535 329 12 49 545 89 606 1.48e-57 206
Msa1389820 AT3G13220.1 28.151 611 369 20 41 605 95 681 2.39e-54 197
Msa1389820 AT1G71960.1 28.257 591 382 14 45 602 78 659 9.56e-53 192
Msa1389820 AT1G31770.1 27.568 584 372 15 50 602 81 644 1.66e-52 191
Msa1389820 AT2G29940.1 28.676 544 304 20 50 541 853 1364 3.54e-52 194
Msa1389820 AT2G29940.1 24.470 613 394 13 50 600 175 780 3.93e-42 164
Msa1389820 AT4G27420.1 27.732 613 371 19 39 609 55 637 1.25e-51 188
Msa1389820 AT1G59870.1 25.856 526 362 11 50 551 894 1415 2.65e-50 188
Msa1389820 AT1G59870.1 21.390 561 376 12 50 550 186 741 2.67e-31 130
Msa1389820 AT1G66950.1 27.243 602 363 22 50 603 880 1454 3.69e-49 185
Msa1389820 AT1G66950.1 22.862 643 416 15 28 601 167 798 1.19e-34 141
Msa1389820 AT3G53480.1 24.765 533 365 12 50 554 877 1401 2.81e-48 182
Msa1389820 AT3G53480.1 22.565 616 399 19 50 600 189 791 9.47e-29 123
Msa1389820 AT5G06530.2 27.256 554 345 15 40 546 169 711 3.45e-48 180
Msa1389820 AT5G06530.1 27.256 554 345 15 40 546 169 711 3.45e-48 180
Msa1389820 AT1G51460.1 26.572 636 384 19 34 603 7 625 3.48e-48 179
Msa1389820 AT1G15520.1 25.000 584 358 19 8 545 818 1367 6.76e-48 181
Msa1389820 AT1G15520.1 22.654 618 382 19 50 592 169 765 6.06e-35 142
Msa1389820 AT3G16340.1 25.188 532 370 12 50 557 841 1368 7.19e-48 181
Msa1389820 AT3G16340.1 22.364 626 405 17 43 600 155 767 2.04e-33 137
Msa1389820 AT3G16340.2 25.188 532 370 12 50 557 836 1363 7.25e-48 181
Msa1389820 AT3G16340.2 22.364 626 400 18 43 600 155 762 6.09e-32 132
Msa1389820 AT1G15210.1 24.904 522 364 11 50 547 867 1384 3.27e-47 179
Msa1389820 AT1G15210.1 22.061 621 399 14 50 600 184 789 1.69e-32 134
Msa1389820 AT5G06530.3 27.308 520 322 14 40 512 169 679 8.72e-47 175
Msa1389820 AT4G15236.1 26.325 604 342 16 11 543 759 1330 2.24e-46 177
Msa1389820 AT4G15236.1 23.718 624 400 14 50 608 153 765 6.77e-38 151
Msa1389820 AT2G37280.4 24.386 529 360 15 50 548 682 1200 3.33e-46 176
Msa1389820 AT2G37280.4 21.812 596 396 13 66 600 12 598 3.00e-30 127
Msa1389820 AT2G37280.1 24.386 529 360 15 50 548 840 1358 5.23e-46 176
Msa1389820 AT2G37280.1 22.222 612 406 13 50 600 154 756 2.23e-32 134
Msa1389820 AT2G36380.1 27.736 530 327 21 50 541 879 1390 5.40e-46 176
Msa1389820 AT2G36380.1 24.233 619 391 14 50 601 188 795 2.07e-40 159
Msa1389820 AT2G37280.3 24.386 529 360 15 50 548 869 1387 5.74e-46 175
Msa1389820 AT2G37280.3 20.938 640 409 13 50 600 154 785 7.07e-28 120
Msa1389820 AT2G01320.7 29.705 441 250 13 48 445 88 511 1.56e-45 169
Msa1389820 AT2G01320.6 29.705 441 250 13 48 445 88 511 1.56e-45 169
Msa1389820 AT2G26910.1 26.038 530 340 15 50 543 845 1358 4.00e-45 173
Msa1389820 AT2G26910.1 22.168 618 402 13 50 600 150 755 6.51e-30 126
Msa1389820 AT4G15233.8 25.521 576 382 14 11 543 752 1323 6.80e-44 169
Msa1389820 AT4G15233.8 23.723 607 391 15 65 608 161 758 1.24e-35 144
Msa1389820 AT4G15233.7 25.521 576 382 14 11 543 743 1314 7.49e-44 169
Msa1389820 AT4G15233.7 24.172 604 404 13 50 608 155 749 1.40e-39 156
Msa1389820 AT4G15233.1 25.340 588 368 14 11 543 761 1332 8.27e-44 169
Msa1389820 AT4G15233.1 24.116 622 400 15 50 608 155 767 6.02e-38 151
Msa1389820 AT4G15233.3 25.521 576 382 14 11 543 699 1270 9.42e-44 169
Msa1389820 AT4G15233.3 23.955 622 401 15 50 608 93 705 6.61e-38 151
Msa1389820 AT4G15233.6 25.521 576 382 14 11 543 699 1270 9.42e-44 169
Msa1389820 AT4G15233.6 23.955 622 401 15 50 608 93 705 6.61e-38 151
Msa1389820 AT5G06530.4 26.978 493 304 14 67 512 1 484 2.69e-43 162
Msa1389820 AT4G15233.5 26.181 508 347 12 60 543 686 1189 3.24e-43 167
Msa1389820 AT4G15233.5 23.906 594 400 12 50 600 93 677 2.05e-39 155
Msa1389820 AT4G15233.4 26.181 508 347 12 60 543 686 1189 3.24e-43 167
Msa1389820 AT4G15233.4 23.906 594 400 12 50 600 93 677 2.05e-39 155
Msa1389820 AT3G30842.1 25.806 527 355 15 50 548 848 1366 3.29e-42 164
Msa1389820 AT3G30842.1 21.300 554 371 10 50 542 161 710 1.22e-31 132
Msa1389820 AT3G25620.1 35.915 284 159 8 20 287 73 349 8.43e-42 157
Msa1389820 AT4G15230.4 25.376 532 367 13 50 556 748 1274 2.20e-41 161
Msa1389820 AT4G15230.4 23.491 613 397 16 50 600 77 679 1.10e-34 141
Msa1389820 AT4G15230.3 25.376 532 367 13 50 556 827 1353 2.29e-41 161
Msa1389820 AT4G15230.3 23.491 613 397 16 50 600 156 758 1.26e-34 141
Msa1389820 AT4G15230.1 25.376 532 367 13 50 556 827 1353 2.29e-41 161
Msa1389820 AT4G15230.1 23.491 613 397 16 50 600 156 758 1.26e-34 141
Msa1389820 AT2G37280.2 25.051 495 331 15 50 514 840 1324 6.89e-41 160
Msa1389820 AT2G37280.2 21.931 611 409 12 50 600 154 756 3.38e-32 133
Msa1389820 AT4G15215.1 26.012 519 354 11 50 543 817 1330 3.69e-40 158
Msa1389820 AT4G15215.1 25.040 619 379 20 50 603 153 751 7.91e-35 141
Msa1389820 AT4G15215.9 26.012 519 354 11 50 543 821 1334 3.70e-40 158
Msa1389820 AT4G15215.9 24.919 618 388 18 50 603 150 755 7.03e-37 148
Msa1389820 AT4G15215.4 26.012 519 354 11 50 543 821 1334 3.70e-40 158
Msa1389820 AT4G15215.4 24.919 618 388 18 50 603 150 755 7.03e-37 148
Msa1389820 AT4G15215.5 26.012 519 354 11 50 543 821 1334 3.70e-40 158
Msa1389820 AT4G15215.5 24.919 618 388 18 50 603 150 755 7.03e-37 148
Msa1389820 AT4G15215.3 26.012 519 354 11 50 543 821 1334 3.70e-40 158
Msa1389820 AT4G15215.3 24.919 618 388 18 50 603 150 755 7.03e-37 148
Msa1389820 AT4G15215.2 26.012 519 354 11 50 543 821 1334 3.70e-40 158
Msa1389820 AT4G15215.2 24.919 618 388 18 50 603 150 755 7.03e-37 148
Msa1389820 AT4G15215.11 26.012 519 354 11 50 543 824 1337 4.44e-40 157
Msa1389820 AT4G15215.11 24.919 618 388 18 50 603 153 758 7.57e-37 148
Msa1389820 AT4G15215.8 26.012 519 354 11 50 543 814 1327 4.85e-40 157
Msa1389820 AT4G15215.8 24.757 618 382 19 50 603 150 748 1.15e-34 141
Msa1389820 AT4G15215.10 26.012 519 354 11 50 543 814 1327 4.85e-40 157
Msa1389820 AT4G15215.10 24.757 618 382 19 50 603 150 748 1.15e-34 141
Msa1389820 AT4G15215.6 26.012 519 354 11 50 543 814 1327 4.85e-40 157
Msa1389820 AT4G15215.6 24.757 618 382 19 50 603 150 748 1.15e-34 141
Msa1389820 AT4G15215.7 26.012 519 354 11 50 543 814 1327 4.85e-40 157
Msa1389820 AT4G15215.7 24.757 618 382 19 50 603 150 748 1.15e-34 141
Msa1389820 AT4G15233.2 24.500 600 382 15 11 543 761 1356 1.17e-39 156
Msa1389820 AT4G15233.2 24.116 622 400 15 50 608 155 767 4.91e-38 151
Msa1389820 AT4G15230.2 23.491 613 397 16 50 600 156 758 1.04e-34 141
Msa1389820 AT4G15230.2 25.662 491 335 13 50 515 827 1312 2.06e-33 137
Msa1389820 AT1G53390.1 25.657 495 298 14 50 484 523 1007 1.06e-34 141
Msa1389820 AT2G37010.2 31.907 257 165 5 49 296 499 754 1.19e-34 140
Msa1389820 AT2G37010.1 31.907 257 165 5 49 296 499 754 1.19e-34 140
Msa1389820 AT1G15520.2 22.654 618 382 19 50 592 169 765 1.49e-34 140
Msa1389820 AT1G15520.2 25.806 465 277 16 8 432 818 1254 8.47e-33 135
Msa1389820 AT2G28070.2 24.789 593 393 16 48 602 131 708 8.16e-32 131
Msa1389820 AT2G28070.1 24.789 593 393 16 48 602 131 708 8.16e-32 131
Msa1389820 AT5G60740.1 31.429 245 156 6 49 283 514 756 1.09e-26 116
Msa1389820 AT1G27940.2 34.101 217 127 7 44 251 800 1009 2.16e-19 93.2
Msa1389820 AT1G27940.2 30.415 217 142 4 44 255 168 380 6.64e-19 91.7
Msa1389820 AT1G28010.1 30.594 219 143 4 44 257 383 597 2.23e-19 93.6
Msa1389820 AT1G28010.1 33.913 230 134 8 44 264 1016 1236 2.67e-19 93.2
Msa1389820 AT1G27940.1 34.101 217 127 7 44 251 1014 1223 2.45e-19 93.2
Msa1389820 AT1G27940.1 30.415 217 142 4 44 255 382 594 6.71e-19 92.0
Msa1389820 AT5G61730.2 27.734 256 171 6 42 288 540 790 4.28e-19 92.4
Msa1389820 AT2G41700.1 38.255 149 90 2 51 198 568 715 4.87e-19 92.4
Msa1389820 AT2G41700.1 30.065 153 105 2 47 198 1470 1621 4.82e-16 82.8
Msa1389820 AT2G36910.1 29.461 241 143 8 44 262 1034 1269 5.19e-19 92.4
Msa1389820 AT2G36910.1 28.194 227 147 8 44 263 378 595 6.74e-11 66.2
Msa1389820 AT5G61730.1 27.734 256 171 6 42 288 530 780 5.24e-19 92.0
Msa1389820 AT2G41700.2 38.255 149 90 2 51 198 498 645 5.56e-19 92.4
Msa1389820 AT2G41700.2 30.065 153 105 2 47 198 1428 1579 5.51e-16 82.8
Msa1389820 AT3G47730.1 32.000 225 136 10 41 257 537 752 1.07e-18 90.9
Msa1389820 AT3G28380.1 32.328 232 137 9 36 255 997 1220 1.61e-18 90.5
Msa1389820 AT3G28380.1 27.074 229 148 8 39 255 361 582 4.96e-12 69.7
Msa1389820 AT1G70610.2 30.233 215 140 6 50 257 291 502 2.56e-18 89.0
Msa1389820 AT1G70610.1 30.233 215 140 6 50 257 472 683 4.40e-18 88.6
Msa1389820 AT5G61690.2 28.507 221 149 5 41 257 538 753 7.10e-18 88.6
Msa1389820 AT3G47780.1 29.302 215 147 4 45 257 628 839 1.49e-17 87.4
Msa1389820 AT3G28360.1 31.624 234 136 9 36 255 983 1206 1.06e-16 84.7
Msa1389820 AT3G28360.1 29.717 212 138 6 46 251 359 565 2.57e-13 73.9
Msa1389820 AT3G47750.1 26.977 215 152 4 45 257 630 841 3.19e-16 83.2
Msa1389820 AT3G28390.1 32.579 221 135 8 44 255 990 1205 3.21e-16 83.2
Msa1389820 AT3G28390.1 27.826 230 148 9 36 255 349 570 1.91e-12 71.2
Msa1389820 AT3G28345.1 32.068 237 137 8 35 257 996 1222 3.40e-16 83.2
Msa1389820 AT3G28345.1 27.273 253 166 7 50 296 376 616 2.25e-13 74.3
Msa1389820 AT3G47740.1 27.907 215 150 4 45 257 625 836 3.41e-16 83.2
Msa1389820 AT3G47770.1 27.907 215 150 4 45 257 599 810 5.77e-16 82.4
Msa1389820 AT5G61700.1 27.442 215 151 4 45 257 610 821 6.24e-16 82.0
Msa1389820 AT3G47770.2 27.907 215 150 4 45 257 625 836 7.79e-16 82.0
Msa1389820 AT2G47000.6 31.858 226 127 9 39 250 1049 1261 8.16e-16 82.0
Msa1389820 AT2G47000.6 28.302 212 141 7 46 251 397 603 2.09e-12 70.9
Msa1389820 AT2G47000.5 31.858 226 127 9 39 250 1049 1261 8.16e-16 82.0
Msa1389820 AT2G47000.5 28.302 212 141 7 46 251 397 603 2.09e-12 70.9
Msa1389820 AT2G47000.1 31.858 226 127 9 39 250 1049 1261 8.16e-16 82.0
Msa1389820 AT2G47000.1 28.302 212 141 7 46 251 397 603 2.09e-12 70.9
Msa1389820 AT4G28620.1 30.045 223 133 6 41 251 445 656 9.13e-16 81.3
Msa1389820 AT3G62150.3 31.602 231 131 9 39 255 1059 1276 1.01e-15 81.6
Msa1389820 AT3G62150.3 29.545 220 136 8 46 255 416 626 1.54e-13 74.7
Msa1389820 AT3G62150.2 31.602 231 131 9 39 255 1059 1276 1.01e-15 81.6
Msa1389820 AT3G62150.2 29.545 220 136 8 46 255 416 626 1.54e-13 74.7
Msa1389820 AT3G62150.1 31.602 231 131 9 39 255 1059 1276 1.01e-15 81.6
Msa1389820 AT3G62150.1 29.545 220 136 8 46 255 416 626 1.54e-13 74.7
Msa1389820 AT4G33460.1 28.444 225 147 5 50 272 59 271 1.83e-15 77.4
Msa1389820 AT5G61690.1 28.378 222 147 6 41 257 538 752 2.18e-15 80.5
Msa1389820 AT1G65410.1 30.837 227 128 7 48 250 97 318 1.23e-14 76.3
Msa1389820 AT5G61700.2 29.348 184 125 4 45 225 610 791 1.37e-14 77.8
Msa1389820 AT5G61700.4 29.348 184 125 4 45 225 610 791 1.37e-14 77.8
Msa1389820 AT4G28630.1 27.876 226 134 7 41 251 443 654 2.20e-14 77.0
Msa1389820 AT5G61740.3 25.397 252 169 7 45 288 463 703 3.02e-14 76.6
Msa1389820 AT4G25960.1 29.870 231 143 9 39 257 403 626 3.30e-14 77.0
Msa1389820 AT4G25960.1 27.103 214 146 5 44 251 1040 1249 1.26e-13 75.1
Msa1389820 AT3G47760.1 26.977 215 152 4 45 257 589 800 3.50e-14 76.6
Msa1389820 AT5G61740.1 25.397 252 169 7 45 288 602 842 3.98e-14 76.3
Msa1389820 AT5G61740.2 25.397 252 169 7 45 288 568 808 4.68e-14 76.3
Msa1389820 AT5G58270.1 29.596 223 132 8 41 250 485 695 5.06e-14 75.9
Msa1389820 AT3G47760.3 26.977 215 152 4 45 257 629 840 5.46e-14 75.9
Msa1389820 AT3G47790.1 26.389 216 152 5 45 257 601 812 7.12e-14 75.5
Msa1389820 AT3G47760.2 26.977 215 152 4 45 257 599 810 7.14e-14 75.5
Msa1389820 AT1G02530.1 28.947 228 130 8 46 255 1040 1253 1.77e-13 74.3
Msa1389820 AT1G02530.1 30.317 221 133 9 46 255 381 591 6.41e-12 69.3
Msa1389820 AT3G28860.1 28.139 231 147 9 39 257 1012 1235 1.88e-13 74.3
Msa1389820 AT3G28860.1 28.070 228 147 8 39 255 367 588 5.86e-12 69.7
Msa1389820 AT1G02520.1 28.571 231 132 9 44 255 1042 1258 4.60e-13 73.2
Msa1389820 AT1G02520.1 29.224 219 138 6 46 255 394 604 4.96e-12 69.7
Msa1389820 AT1G02520.2 28.571 231 132 9 44 255 1042 1258 4.60e-13 73.2
Msa1389820 AT1G02520.2 29.224 219 138 6 46 255 394 604 4.96e-12 69.7
Msa1389820 AT1G02520.3 28.571 231 132 9 44 255 1042 1258 4.60e-13 73.2
Msa1389820 AT1G02520.3 29.224 219 138 6 46 255 394 604 4.96e-12 69.7
Msa1389820 AT5G46540.1 30.493 223 131 8 46 255 1018 1229 5.71e-13 72.8
Msa1389820 AT5G46540.1 27.876 226 141 10 37 251 362 576 6.04e-11 66.2
Msa1389820 AT1G10680.2 28.194 227 144 9 37 251 361 580 6.01e-13 72.8
Msa1389820 AT1G10680.1 28.194 227 144 9 37 251 361 580 9.59e-13 72.0
Msa1389820 AT1G10680.1 28.111 217 140 7 44 251 992 1201 1.19e-11 68.6
Msa1389820 AT2G47000.3 28.241 216 144 7 46 255 397 607 1.20e-12 71.6
Msa1389820 AT2G47000.7 28.241 216 144 7 46 255 397 607 1.20e-12 71.6
Msa1389820 AT2G47000.4 28.302 212 141 7 46 251 397 603 1.24e-12 71.6
Msa1389820 AT2G47000.2 28.302 212 141 7 46 251 397 603 1.55e-12 71.2
Msa1389820 AT3G47790.2 27.219 169 119 3 45 210 482 649 2.34e-12 70.5
Msa1389820 AT3G47790.3 27.219 169 119 3 45 210 601 768 3.42e-12 70.1
Msa1389820 AT1G02530.2 30.317 221 133 9 46 255 381 591 3.56e-12 70.1
Msa1389820 AT2G47800.1 25.746 268 163 10 51 305 659 903 4.00e-12 70.1
Msa1389820 AT4G01830.1 28.761 226 130 8 46 255 366 576 6.03e-12 69.7
Msa1389820 AT4G01830.2 28.761 226 130 8 46 255 132 342 6.29e-12 69.3
Msa1389820 AT4G25450.3 30.396 227 137 8 46 255 314 536 2.77e-11 66.6
Msa1389820 AT2G07680.2 26.852 216 131 6 48 255 598 794 3.27e-11 67.0
Msa1389820 AT4G25450.1 30.396 227 137 8 46 255 483 705 3.58e-11 66.6
Msa1389820 AT2G07680.5 26.852 216 131 6 48 255 582 778 5.11e-11 66.6
Msa1389820 AT2G07680.6 26.852 216 131 6 48 255 499 695 5.25e-11 66.6
Msa1389820 AT2G07680.3 26.852 216 131 6 48 255 598 794 5.43e-11 66.6
Msa1389820 AT2G07680.4 26.852 216 131 6 48 255 573 769 5.75e-11 66.2
Msa1389820 AT2G07680.1 26.852 216 131 6 48 255 576 772 5.95e-11 66.2

Find 101 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACCGTGTGCTTTGTTTCT+TGG 0.136244 tig0021300:-88158 Msa1389820:CDS
TAGTGGGTCTTTGTAGTTCT+TGG 0.209112 tig0021300:-88576 Msa1389820:CDS
CTCTGGATACTTTATCTCTA+AGG 0.213002 tig0021300:-88410 Msa1389820:CDS
CATTTGGGTCATAGTTCTTA+TGG 0.230195 tig0021300:-88527 Msa1389820:CDS
ACTTCTAAGCCTTCAAGTTT+TGG 0.253901 tig0021300:+88111 None:intergenic
TCTGAGATTCTTGCCATTGT+TGG 0.268526 tig0021300:-89750 Msa1389820:CDS
CTACTTGATGAACCTACTTC+TGG 0.289537 tig0021300:-89366 Msa1389820:CDS
CAATCATTCTTGCATTCAAA+AGG 0.318311 tig0021300:-89165 Msa1389820:CDS
TATTGATAGGTGAAGAGTTA+AGG 0.330064 tig0021300:+89652 None:intergenic
AAGGGAAAGTGTTCCACTTA+AGG 0.331205 tig0021300:+89671 None:intergenic
AGGCTTAATCATGGTTTATC+TGG 0.333498 tig0021300:-89447 Msa1389820:CDS
ACAGCAACTACTAGCAAATA+TGG 0.342892 tig0021300:+88625 None:intergenic
AAACATCAAGTGGTGTTTAT+AGG 0.347089 tig0021300:-88687 Msa1389820:CDS
TAGCTACAAGGTGCATGATA+TGG 0.350896 tig0021300:-88297 Msa1389820:CDS
TATCTGGTGGTGAACGTAGA+AGG 0.357589 tig0021300:-89431 Msa1389820:CDS
TTAGCACCAAACTACATTGC+TGG 0.358654 tig0021300:-88475 Msa1389820:CDS
AGATGGTGTTGTTTGTTTGT+AGG 0.365281 tig0021300:+89856 None:intergenic
AGGATGTAGTTTGGTGGGGT+TGG 0.368948 tig0021300:+89801 None:intergenic
AGACCCACTAAGAAGTAAAC+TGG 0.383218 tig0021300:+88589 None:intergenic
TTGGTTCAATCTCATTCAAT+TGG 0.390328 tig0021300:+89088 None:intergenic
GATGTTTCTCTTAACAAGAT+TGG 0.393773 tig0021300:+88703 None:intergenic
CTGGTGATTCAGGTAAACTT+GGG 0.398848 tig0021300:+89055 None:intergenic
ATTGATAGGTGAAGAGTTAA+GGG 0.399405 tig0021300:+89653 None:intergenic
TATTCCAGTTTACTTCTTAG+TGG 0.406878 tig0021300:-88593 Msa1389820:CDS
AGAATCTTGCTTCTTTCAAA+AGG 0.407153 tig0021300:-89222 Msa1389820:CDS
TTTCAGTTGTGGAAGATAAG+AGG 0.409843 tig0021300:+88752 None:intergenic
AGGGAAAGTGTTCCACTTAA+GGG 0.411269 tig0021300:+89672 None:intergenic
GCTAGAAGATTACCCTTAAG+TGG 0.418337 tig0021300:-89684 Msa1389820:CDS
AACATTGGGTTTGATAAAGA+AGG 0.420105 tig0021300:-88817 Msa1389820:CDS
GAAGGGATTGAGAAAAGGTT+TGG 0.421058 tig0021300:-88799 Msa1389820:CDS
AGGATTGTTTACCTAAGTAT+TGG 0.422289 tig0021300:-88390 Msa1389820:CDS
CTTGAAACTTGGTTGGTGAA+TGG 0.422759 tig0021300:+89263 None:intergenic
TCAGATACAGCACAACCTAT+TGG 0.424979 tig0021300:+89018 None:intergenic
AAAGGAACTGTTGTTCATCA+TGG 0.425259 tig0021300:-89204 Msa1389820:CDS
GACAATATTGGAAGAGCTAA+AGG 0.425733 tig0021300:-88997 Msa1389820:CDS
CTTTGAGGATGTAGTTTGGT+GGG 0.429124 tig0021300:+89796 None:intergenic
GAAGTTCCAGCAATGTAGTT+TGG 0.429184 tig0021300:+88469 None:intergenic
AGATCAGATACAAGAGTTCA+AGG 0.433174 tig0021300:-88963 Msa1389820:CDS
ACATCTTTGAGGATGTAGTT+TGG 0.433927 tig0021300:+89792 None:intergenic
TGAGCTTAGACTCACTCATT+TGG 0.436020 tig0021300:-89478 Msa1389820:CDS
ACTGCAGAAGCATTACTTGT+TGG 0.441840 tig0021300:-88865 Msa1389820:CDS
GAACAATTTACATAAACATT+GGG 0.444004 tig0021300:-88831 Msa1389820:CDS
TTTCAAGATCCAAAACTTGA+AGG 0.447193 tig0021300:-88120 None:intergenic
GAAAATTCTGAATCTCCAAT+AGG 0.448493 tig0021300:-89033 Msa1389820:CDS
AGTATTCTTGCTTAGCTACA+AGG 0.450474 tig0021300:-88309 Msa1389820:CDS
TCTGGTGATTCAGGTAAACT+TGG 0.451945 tig0021300:+89054 None:intergenic
CAAGAGAGAATCTTGAAACT+TGG 0.453012 tig0021300:+89252 None:intergenic
GAACGTAGAAGGGTCTCTAT+TGG 0.453694 tig0021300:-89420 Msa1389820:CDS
ATAAAGAAGGGATTGAGAAA+AGG 0.459342 tig0021300:-88804 Msa1389820:CDS
TGGTCCATCTCTGTCCCTCA+TGG 0.461347 tig0021300:+88212 None:intergenic
TGTGCTGTATCTGACAATAT+TGG 0.467427 tig0021300:-89009 Msa1389820:CDS
ATTGTTGGTCCAAGTGGTGC+AGG 0.470081 tig0021300:-89735 Msa1389820:CDS
ATTCCAGTTTACTTCTTAGT+GGG 0.470297 tig0021300:-88592 Msa1389820:CDS
GCTAATACAAGGCTTAATCA+TGG 0.471066 tig0021300:-89456 Msa1389820:CDS
CCCTCATCAGCTTAATGCAT+TGG 0.472499 tig0021300:-89133 Msa1389820:CDS
TTGGTGGAAGTGGTGATGGT+TGG 0.473846 tig0021300:+89922 None:intergenic
GGAACAATTTACATAAACAT+TGG 0.480500 tig0021300:-88832 Msa1389820:CDS
AATGTAGAAGGGTTATTGAT+AGG 0.480588 tig0021300:+89639 None:intergenic
AATCATTCTTGCATTCAAAA+GGG 0.495627 tig0021300:-89164 Msa1389820:CDS
ACATTGGGTTTGATAAAGAA+GGG 0.500934 tig0021300:-88816 Msa1389820:CDS
CAATTGGTTTAATATTTCCA+TGG 0.507403 tig0021300:+89104 None:intergenic
AATTGGAAGTGTTTCAGTTG+TGG 0.511520 tig0021300:+88741 None:intergenic
GTTGATTTCCCTGCACCACT+TGG 0.520078 tig0021300:+89726 None:intergenic
TGGTGATTCAGGTAAACTTG+GGG 0.521679 tig0021300:+89056 None:intergenic
GTTTCAGAAACAGTTAACAT+AGG 0.527125 tig0021300:+89573 None:intergenic
AGAGAATCTTGAAACTTGGT+TGG 0.528765 tig0021300:+89256 None:intergenic
AACAATGGCAGCAATATCAA+TGG 0.532997 tig0021300:+89515 None:intergenic
CTTGCCATTGTTGGTCCAAG+TGG 0.541673 tig0021300:-89741 Msa1389820:CDS
CAATGTTTGAAGAAGAGAAA+TGG 0.543396 tig0021300:+89828 None:intergenic
CTCAGAAGGGTATGCTGTGA+GGG 0.545427 tig0021300:+89767 None:intergenic
TCCAATGCATTAAGCTGATG+AGG 0.546566 tig0021300:+89132 None:intergenic
TCACTCATTTGGCTAATACA+AGG 0.555294 tig0021300:-89467 Msa1389820:CDS
GAACTATCAAGACCAGAAGT+AGG 0.557431 tig0021300:+89354 None:intergenic
GAAGAGAAATGGTGCAAAGA+TGG 0.557470 tig0021300:+89839 None:intergenic
CTGTGAGGGAAACATCTTTG+AGG 0.561771 tig0021300:+89781 None:intergenic
CTTAATCATGGTTTATCTGG+TGG 0.563491 tig0021300:-89444 Msa1389820:CDS
TAATGCATTGGAATATGCCA+TGG 0.567490 tig0021300:-89121 Msa1389820:CDS
GGCTCCATGAGGGACAGAGA+TGG 0.568409 tig0021300:-88216 Msa1389820:CDS
TCTTTGAGGATGTAGTTTGG+TGG 0.569229 tig0021300:+89795 None:intergenic
TTTGAGGATGTAGTTTGGTG+GGG 0.569939 tig0021300:+89797 None:intergenic
TGCACCACTTGGACCAACAA+TGG 0.574818 tig0021300:+89737 None:intergenic
GATCAAGAGTGCATGATCAC+TGG 0.577594 tig0021300:-88262 Msa1389820:CDS
TTGCATGACTTTGAAAGCAG+AGG 0.579417 tig0021300:+89332 None:intergenic
TCATCAAGTAGCAAAACAGC+AGG 0.584759 tig0021300:+89378 None:intergenic
CCAATGCATTAAGCTGATGA+GGG 0.590345 tig0021300:+89133 None:intergenic
ATCTGGTGGTGAACGTAGAA+GGG 0.591797 tig0021300:-89430 Msa1389820:CDS
TGCATGAATAGCCAATACTT+AGG 0.600821 tig0021300:+88379 None:intergenic
CAGAAGAGAGGGCTCCATGA+GGG 0.602248 tig0021300:-88226 Msa1389820:CDS
GGAAGACATGCATCATGTTG+AGG 0.603813 tig0021300:+89594 None:intergenic
GGTGATTCAGGTAAACTTGG+GGG 0.608827 tig0021300:+89057 None:intergenic
ACAATGGCAAGAATCTCAGA+AGG 0.610446 tig0021300:+89753 None:intergenic
GTGACGTGTTGCAGAAGAGA+GGG 0.621394 tig0021300:-88237 Msa1389820:CDS
TTGTTGGTCCAAGTGGTGCA+GGG 0.642093 tig0021300:-89734 Msa1389820:CDS
TCTCAGAAGGGTATGCTGTG+AGG 0.645086 tig0021300:+89766 None:intergenic
ATTTAAAAGAGAAGAAACAA+TGG 0.646182 tig0021300:+89500 None:intergenic
TTGTTAAGAGAAACATCAAG+TGG 0.665942 tig0021300:-88697 Msa1389820:CDS
GCAGAAGAGAGGGCTCCATG+AGG 0.687435 tig0021300:-88227 Msa1389820:CDS
GGTGACGTGTTGCAGAAGAG+AGG 0.688147 tig0021300:-88238 Msa1389820:CDS
CAATGGCAAGAATCTCAGAA+GGG 0.692708 tig0021300:+89754 None:intergenic
AAACCAAGAAACAAAGCACA+CGG 0.694073 tig0021300:+88155 None:intergenic
CAAGAGTGCATGATCACTGG+TGG 0.712596 tig0021300:-88259 Msa1389820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAAAAGAGAAGAAACAA+TGG + tig0021300:88556-88575 None:intergenic 20.0%
!!! AAATTTGTACACTTTTTAGA+AGG - tig0021300:89120-89139 Msa1389820:CDS 20.0%
!! GAACAATTTACATAAACATT+GGG - tig0021300:89222-89241 Msa1389820:CDS 20.0%
!! ATTTAAAAGAGAAGAAACAA+TGG + tig0021300:88556-88575 None:intergenic 20.0%
!!! AAATTTGTACACTTTTTAGA+AGG - tig0021300:89120-89139 Msa1389820:CDS 20.0%
!! GAACAATTTACATAAACATT+GGG - tig0021300:89222-89241 Msa1389820:CDS 20.0%
! AATCATTCTTGCATTCAAAA+GGG - tig0021300:88889-88908 Msa1389820:CDS 25.0%
!! CAATTGGTTTAATATTTCCA+TGG + tig0021300:88952-88971 None:intergenic 25.0%
! GGAACAATTTACATAAACAT+TGG - tig0021300:89221-89240 Msa1389820:CDS 25.0%
!!! ATCTTTTGCTTACTTTGTTT+TGG - tig0021300:89502-89521 Msa1389820:CDS 25.0%
!!! TTACTTTGTTTTGGTCATTT+GGG - tig0021300:89511-89530 Msa1389820:CDS 25.0%
!!! ACCAATGTGTATTTTTTGAT+TGG - tig0021300:89860-89879 Msa1389820:CDS 25.0%
! TCCAATCAAAAAATACACAT+TGG + tig0021300:89864-89883 None:intergenic 25.0%
!!! TTTCTTGGTTTTACTTAGAA+GGG - tig0021300:89910-89929 Msa1389820:CDS 25.0%
! AATCATTCTTGCATTCAAAA+GGG - tig0021300:88889-88908 Msa1389820:CDS 25.0%
!! CAATTGGTTTAATATTTCCA+TGG + tig0021300:88952-88971 None:intergenic 25.0%
! GGAACAATTTACATAAACAT+TGG - tig0021300:89221-89240 Msa1389820:CDS 25.0%
!!! ATCTTTTGCTTACTTTGTTT+TGG - tig0021300:89502-89521 Msa1389820:CDS 25.0%
!!! TTACTTTGTTTTGGTCATTT+GGG - tig0021300:89511-89530 Msa1389820:CDS 25.0%
!!! ACCAATGTGTATTTTTTGAT+TGG - tig0021300:89860-89879 Msa1389820:CDS 25.0%
! TCCAATCAAAAAATACACAT+TGG + tig0021300:89864-89883 None:intergenic 25.0%
!!! TTTCTTGGTTTTACTTAGAA+GGG - tig0021300:89910-89929 Msa1389820:CDS 25.0%
!!! GTTAGTTTGTATGTTTTTGG+TGG + tig0021300:88150-88169 None:intergenic 30.0%
!!! GCTGTTAGTTTGTATGTTTT+TGG + tig0021300:88153-88172 None:intergenic 30.0%
! GTTGTTTGTTTGTAGGTTTT+TGG + tig0021300:88193-88212 None:intergenic 30.0%
CAATGTTTGAAGAAGAGAAA+TGG + tig0021300:88228-88247 None:intergenic 30.0%
ATTGATAGGTGAAGAGTTAA+GGG + tig0021300:88403-88422 None:intergenic 30.0%
TATTGATAGGTGAAGAGTTA+AGG + tig0021300:88404-88423 None:intergenic 30.0%
AATGTAGAAGGGTTATTGAT+AGG + tig0021300:88417-88436 None:intergenic 30.0%
! AGAGTTTTCTGAATGTAGAA+GGG + tig0021300:88428-88447 None:intergenic 30.0%
GTTTCAGAAACAGTTAACAT+AGG + tig0021300:88483-88502 None:intergenic 30.0%
AGAATCTTGCTTCTTTCAAA+AGG - tig0021300:88831-88850 Msa1389820:CDS 30.0%
CAATCATTCTTGCATTCAAA+AGG - tig0021300:88888-88907 Msa1389820:CDS 30.0%
TTGGTTCAATCTCATTCAAT+TGG + tig0021300:88968-88987 None:intergenic 30.0%
! ATTGGAGATTCAGAATTTTC+TGG + tig0021300:89020-89039 None:intergenic 30.0%
GAAAATTCTGAATCTCCAAT+AGG - tig0021300:89020-89039 Msa1389820:CDS 30.0%
!! GTACACTTTTTAGAAGGTTT+TGG - tig0021300:89126-89145 Msa1389820:CDS 30.0%
!!! TTACTTGTTGGTCTTGTTTT+AGG - tig0021300:89200-89219 Msa1389820:CDS 30.0%
AACATTGGGTTTGATAAAGA+AGG - tig0021300:89236-89255 Msa1389820:CDS 30.0%
ACATTGGGTTTGATAAAGAA+GGG - tig0021300:89237-89256 Msa1389820:CDS 30.0%
ATAAAGAAGGGATTGAGAAA+AGG - tig0021300:89249-89268 Msa1389820:CDS 30.0%
GGTCTCTCATTGATAAAAAT+TGG + tig0021300:89332-89351 None:intergenic 30.0%
GATGTTTCTCTTAACAAGAT+TGG + tig0021300:89353-89372 None:intergenic 30.0%
TTGTTAAGAGAAACATCAAG+TGG - tig0021300:89356-89375 Msa1389820:CDS 30.0%
AAACATCAAGTGGTGTTTAT+AGG - tig0021300:89366-89385 Msa1389820:CDS 30.0%
TATTCCAGTTTACTTCTTAG+TGG - tig0021300:89460-89479 Msa1389820:CDS 30.0%
ATTCCAGTTTACTTCTTAGT+GGG - tig0021300:89461-89480 Msa1389820:CDS 30.0%
!!! CTTACTTTGTTTTGGTCATT+TGG - tig0021300:89510-89529 Msa1389820:CDS 30.0%
AGGATTGTTTACCTAAGTAT+TGG - tig0021300:89663-89682 Msa1389820:CDS 30.0%
!!! GTTTCTTGGTTTTACTTAGA+AGG - tig0021300:89909-89928 Msa1389820:CDS 30.0%
!!! GTTAGTTTGTATGTTTTTGG+TGG + tig0021300:88150-88169 None:intergenic 30.0%
!!! GCTGTTAGTTTGTATGTTTT+TGG + tig0021300:88153-88172 None:intergenic 30.0%
! GTTGTTTGTTTGTAGGTTTT+TGG + tig0021300:88193-88212 None:intergenic 30.0%
CAATGTTTGAAGAAGAGAAA+TGG + tig0021300:88228-88247 None:intergenic 30.0%
ATTGATAGGTGAAGAGTTAA+GGG + tig0021300:88403-88422 None:intergenic 30.0%
TATTGATAGGTGAAGAGTTA+AGG + tig0021300:88404-88423 None:intergenic 30.0%
AATGTAGAAGGGTTATTGAT+AGG + tig0021300:88417-88436 None:intergenic 30.0%
! AGAGTTTTCTGAATGTAGAA+GGG + tig0021300:88428-88447 None:intergenic 30.0%
GTTTCAGAAACAGTTAACAT+AGG + tig0021300:88483-88502 None:intergenic 30.0%
AGAATCTTGCTTCTTTCAAA+AGG - tig0021300:88831-88850 Msa1389820:CDS 30.0%
CAATCATTCTTGCATTCAAA+AGG - tig0021300:88888-88907 Msa1389820:CDS 30.0%
TTGGTTCAATCTCATTCAAT+TGG + tig0021300:88968-88987 None:intergenic 30.0%
! ATTGGAGATTCAGAATTTTC+TGG + tig0021300:89020-89039 None:intergenic 30.0%
GAAAATTCTGAATCTCCAAT+AGG - tig0021300:89020-89039 Msa1389820:CDS 30.0%
!! GTACACTTTTTAGAAGGTTT+TGG - tig0021300:89126-89145 Msa1389820:CDS 30.0%
!!! TTACTTGTTGGTCTTGTTTT+AGG - tig0021300:89200-89219 Msa1389820:CDS 30.0%
AACATTGGGTTTGATAAAGA+AGG - tig0021300:89236-89255 Msa1389820:CDS 30.0%
ACATTGGGTTTGATAAAGAA+GGG - tig0021300:89237-89256 Msa1389820:CDS 30.0%
ATAAAGAAGGGATTGAGAAA+AGG - tig0021300:89249-89268 Msa1389820:CDS 30.0%
GGTCTCTCATTGATAAAAAT+TGG + tig0021300:89332-89351 None:intergenic 30.0%
GATGTTTCTCTTAACAAGAT+TGG + tig0021300:89353-89372 None:intergenic 30.0%
TTGTTAAGAGAAACATCAAG+TGG - tig0021300:89356-89375 Msa1389820:CDS 30.0%
AAACATCAAGTGGTGTTTAT+AGG - tig0021300:89366-89385 Msa1389820:CDS 30.0%
TATTCCAGTTTACTTCTTAG+TGG - tig0021300:89460-89479 Msa1389820:CDS 30.0%
ATTCCAGTTTACTTCTTAGT+GGG - tig0021300:89461-89480 Msa1389820:CDS 30.0%
!!! CTTACTTTGTTTTGGTCATT+TGG - tig0021300:89510-89529 Msa1389820:CDS 30.0%
AGGATTGTTTACCTAAGTAT+TGG - tig0021300:89663-89682 Msa1389820:CDS 30.0%
!!! GTTTCTTGGTTTTACTTAGA+AGG - tig0021300:89909-89928 Msa1389820:CDS 30.0%
!!! TTGTATGTTTTTGGTGGAAG+TGG + tig0021300:88144-88163 None:intergenic 35.0%
!! AGATGGTGTTGTTTGTTTGT+AGG + tig0021300:88200-88219 None:intergenic 35.0%
! ACATCTTTGAGGATGTAGTT+TGG + tig0021300:88264-88283 None:intergenic 35.0%
! GAGAGTTTTCTGAATGTAGA+AGG + tig0021300:88429-88448 None:intergenic 35.0%
! GCAGCAATATCAATGGTTTT+AGG + tig0021300:88534-88553 None:intergenic 35.0%
AACAATGGCAGCAATATCAA+TGG + tig0021300:88541-88560 None:intergenic 35.0%
TCACTCATTTGGCTAATACA+AGG - tig0021300:88586-88605 Msa1389820:CDS 35.0%
GCTAATACAAGGCTTAATCA+TGG - tig0021300:88597-88616 Msa1389820:CDS 35.0%
AGGCTTAATCATGGTTTATC+TGG - tig0021300:88606-88625 Msa1389820:CDS 35.0%
CTTAATCATGGTTTATCTGG+TGG - tig0021300:88609-88628 Msa1389820:CDS 35.0%
AGAGAATCTTGAAACTTGGT+TGG + tig0021300:88800-88819 None:intergenic 35.0%
CAAGAGAGAATCTTGAAACT+TGG + tig0021300:88804-88823 None:intergenic 35.0%
AAAGGAACTGTTGTTCATCA+TGG - tig0021300:88849-88868 Msa1389820:CDS 35.0%
TAATGCATTGGAATATGCCA+TGG - tig0021300:88932-88951 Msa1389820:CDS 35.0%
!! TCAGAATTTTCTGGTGATTC+AGG + tig0021300:89011-89030 None:intergenic 35.0%
TGTGCTGTATCTGACAATAT+TGG - tig0021300:89044-89063 Msa1389820:CDS 35.0%
GACAATATTGGAAGAGCTAA+AGG - tig0021300:89056-89075 Msa1389820:CDS 35.0%
AGATCAGATACAAGAGTTCA+AGG - tig0021300:89090-89109 Msa1389820:CDS 35.0%
TTTCAGTTGTGGAAGATAAG+AGG + tig0021300:89304-89323 None:intergenic 35.0%
!! AATTGGAAGTGTTTCAGTTG+TGG + tig0021300:89315-89334 None:intergenic 35.0%
ACAGCAACTACTAGCAAATA+TGG + tig0021300:89431-89450 None:intergenic 35.0%
CATTTGGGTCATAGTTCTTA+TGG - tig0021300:89526-89545 Msa1389820:CDS 35.0%
CTCTGGATACTTTATCTCTA+AGG - tig0021300:89643-89662 Msa1389820:CDS 35.0%
TGCATGAATAGCCAATACTT+AGG + tig0021300:89677-89696 None:intergenic 35.0%
AGTATTCTTGCTTAGCTACA+AGG - tig0021300:89744-89763 Msa1389820:CDS 35.0%
AAACCAAGAAACAAAGCACA+CGG + tig0021300:89901-89920 None:intergenic 35.0%
!!! TTGTATGTTTTTGGTGGAAG+TGG + tig0021300:88144-88163 None:intergenic 35.0%
!! AGATGGTGTTGTTTGTTTGT+AGG + tig0021300:88200-88219 None:intergenic 35.0%
! ACATCTTTGAGGATGTAGTT+TGG + tig0021300:88264-88283 None:intergenic 35.0%
! GAGAGTTTTCTGAATGTAGA+AGG + tig0021300:88429-88448 None:intergenic 35.0%
! GCAGCAATATCAATGGTTTT+AGG + tig0021300:88534-88553 None:intergenic 35.0%
AACAATGGCAGCAATATCAA+TGG + tig0021300:88541-88560 None:intergenic 35.0%
TCACTCATTTGGCTAATACA+AGG - tig0021300:88586-88605 Msa1389820:CDS 35.0%
GCTAATACAAGGCTTAATCA+TGG - tig0021300:88597-88616 Msa1389820:CDS 35.0%
AGGCTTAATCATGGTTTATC+TGG - tig0021300:88606-88625 Msa1389820:CDS 35.0%
CTTAATCATGGTTTATCTGG+TGG - tig0021300:88609-88628 Msa1389820:CDS 35.0%
AGAGAATCTTGAAACTTGGT+TGG + tig0021300:88800-88819 None:intergenic 35.0%
CAAGAGAGAATCTTGAAACT+TGG + tig0021300:88804-88823 None:intergenic 35.0%
AAAGGAACTGTTGTTCATCA+TGG - tig0021300:88849-88868 Msa1389820:CDS 35.0%
TAATGCATTGGAATATGCCA+TGG - tig0021300:88932-88951 Msa1389820:CDS 35.0%
!! TCAGAATTTTCTGGTGATTC+AGG + tig0021300:89011-89030 None:intergenic 35.0%
TGTGCTGTATCTGACAATAT+TGG - tig0021300:89044-89063 Msa1389820:CDS 35.0%
GACAATATTGGAAGAGCTAA+AGG - tig0021300:89056-89075 Msa1389820:CDS 35.0%
AGATCAGATACAAGAGTTCA+AGG - tig0021300:89090-89109 Msa1389820:CDS 35.0%
TTTCAGTTGTGGAAGATAAG+AGG + tig0021300:89304-89323 None:intergenic 35.0%
!! AATTGGAAGTGTTTCAGTTG+TGG + tig0021300:89315-89334 None:intergenic 35.0%
ACAGCAACTACTAGCAAATA+TGG + tig0021300:89431-89450 None:intergenic 35.0%
CATTTGGGTCATAGTTCTTA+TGG - tig0021300:89526-89545 Msa1389820:CDS 35.0%
CTCTGGATACTTTATCTCTA+AGG - tig0021300:89643-89662 Msa1389820:CDS 35.0%
TGCATGAATAGCCAATACTT+AGG + tig0021300:89677-89696 None:intergenic 35.0%
AGTATTCTTGCTTAGCTACA+AGG - tig0021300:89744-89763 Msa1389820:CDS 35.0%
AAACCAAGAAACAAAGCACA+CGG + tig0021300:89901-89920 None:intergenic 35.0%
GAAGAGAAATGGTGCAAAGA+TGG + tig0021300:88217-88236 None:intergenic 40.0%
! TTTGAGGATGTAGTTTGGTG+GGG + tig0021300:88259-88278 None:intergenic 40.0%
! CTTTGAGGATGTAGTTTGGT+GGG + tig0021300:88260-88279 None:intergenic 40.0%
! TCTTTGAGGATGTAGTTTGG+TGG + tig0021300:88261-88280 None:intergenic 40.0%
CAATGGCAAGAATCTCAGAA+GGG + tig0021300:88302-88321 None:intergenic 40.0%
ACAATGGCAAGAATCTCAGA+AGG + tig0021300:88303-88322 None:intergenic 40.0%
! TCTGAGATTCTTGCCATTGT+TGG - tig0021300:88303-88322 Msa1389820:CDS 40.0%
GCTAGAAGATTACCCTTAAG+TGG - tig0021300:88369-88388 Msa1389820:CDS 40.0%
!! AGGGAAAGTGTTCCACTTAA+GGG + tig0021300:88384-88403 None:intergenic 40.0%
!! AAGGGAAAGTGTTCCACTTA+AGG + tig0021300:88385-88404 None:intergenic 40.0%
TGAGCTTAGACTCACTCATT+TGG - tig0021300:88575-88594 Msa1389820:CDS 40.0%
TCATCAAGTAGCAAAACAGC+AGG + tig0021300:88678-88697 None:intergenic 40.0%
CTACTTGATGAACCTACTTC+TGG - tig0021300:88687-88706 Msa1389820:CDS 40.0%
GAACTATCAAGACCAGAAGT+AGG + tig0021300:88702-88721 None:intergenic 40.0%
! TTGCATGACTTTGAAAGCAG+AGG + tig0021300:88724-88743 None:intergenic 40.0%
!! CTTGAAACTTGGTTGGTGAA+TGG + tig0021300:88793-88812 None:intergenic 40.0%
CCAATGCATTAAGCTGATGA+GGG + tig0021300:88923-88942 None:intergenic 40.0%
TCCAATGCATTAAGCTGATG+AGG + tig0021300:88924-88943 None:intergenic 40.0%
! AAACTTGGGGGTGTAATCAT+TGG + tig0021300:88987-89006 None:intergenic 40.0%
TGGTGATTCAGGTAAACTTG+GGG + tig0021300:89000-89019 None:intergenic 40.0%
CTGGTGATTCAGGTAAACTT+GGG + tig0021300:89001-89020 None:intergenic 40.0%
TCTGGTGATTCAGGTAAACT+TGG + tig0021300:89002-89021 None:intergenic 40.0%
TCAGATACAGCACAACCTAT+TGG + tig0021300:89038-89057 None:intergenic 40.0%
!! ACTGCAGAAGCATTACTTGT+TGG - tig0021300:89188-89207 Msa1389820:CDS 40.0%
GAAGGGATTGAGAAAAGGTT+TGG - tig0021300:89254-89273 Msa1389820:CDS 40.0%
AGACCCACTAAGAAGTAAAC+TGG + tig0021300:89467-89486 None:intergenic 40.0%
! TAGTGGGTCTTTGTAGTTCT+TGG - tig0021300:89477-89496 Msa1389820:CDS 40.0%
TTAGCACCAAACTACATTGC+TGG - tig0021300:89578-89597 Msa1389820:CDS 40.0%
GAAGTTCCAGCAATGTAGTT+TGG + tig0021300:89587-89606 None:intergenic 40.0%
!!! GCAGCATTTTTTCTGTTCTC+TGG - tig0021300:89626-89645 Msa1389820:CDS 40.0%
TAGCTACAAGGTGCATGATA+TGG - tig0021300:89756-89775 Msa1389820:CDS 40.0%
!! TTACCGTGTGCTTTGTTTCT+TGG - tig0021300:89895-89914 Msa1389820:CDS 40.0%
GAAGAGAAATGGTGCAAAGA+TGG + tig0021300:88217-88236 None:intergenic 40.0%
! TTTGAGGATGTAGTTTGGTG+GGG + tig0021300:88259-88278 None:intergenic 40.0%
! CTTTGAGGATGTAGTTTGGT+GGG + tig0021300:88260-88279 None:intergenic 40.0%
! TCTTTGAGGATGTAGTTTGG+TGG + tig0021300:88261-88280 None:intergenic 40.0%
CAATGGCAAGAATCTCAGAA+GGG + tig0021300:88302-88321 None:intergenic 40.0%
ACAATGGCAAGAATCTCAGA+AGG + tig0021300:88303-88322 None:intergenic 40.0%
! TCTGAGATTCTTGCCATTGT+TGG - tig0021300:88303-88322 Msa1389820:CDS 40.0%
GCTAGAAGATTACCCTTAAG+TGG - tig0021300:88369-88388 Msa1389820:CDS 40.0%
!! AGGGAAAGTGTTCCACTTAA+GGG + tig0021300:88384-88403 None:intergenic 40.0%
!! AAGGGAAAGTGTTCCACTTA+AGG + tig0021300:88385-88404 None:intergenic 40.0%
TGAGCTTAGACTCACTCATT+TGG - tig0021300:88575-88594 Msa1389820:CDS 40.0%
TCATCAAGTAGCAAAACAGC+AGG + tig0021300:88678-88697 None:intergenic 40.0%
CTACTTGATGAACCTACTTC+TGG - tig0021300:88687-88706 Msa1389820:CDS 40.0%
GAACTATCAAGACCAGAAGT+AGG + tig0021300:88702-88721 None:intergenic 40.0%
! TTGCATGACTTTGAAAGCAG+AGG + tig0021300:88724-88743 None:intergenic 40.0%
!! CTTGAAACTTGGTTGGTGAA+TGG + tig0021300:88793-88812 None:intergenic 40.0%
CCAATGCATTAAGCTGATGA+GGG + tig0021300:88923-88942 None:intergenic 40.0%
TCCAATGCATTAAGCTGATG+AGG + tig0021300:88924-88943 None:intergenic 40.0%
! AAACTTGGGGGTGTAATCAT+TGG + tig0021300:88987-89006 None:intergenic 40.0%
TGGTGATTCAGGTAAACTTG+GGG + tig0021300:89000-89019 None:intergenic 40.0%
CTGGTGATTCAGGTAAACTT+GGG + tig0021300:89001-89020 None:intergenic 40.0%
TCTGGTGATTCAGGTAAACT+TGG + tig0021300:89002-89021 None:intergenic 40.0%
TCAGATACAGCACAACCTAT+TGG + tig0021300:89038-89057 None:intergenic 40.0%
!! ACTGCAGAAGCATTACTTGT+TGG - tig0021300:89188-89207 Msa1389820:CDS 40.0%
GAAGGGATTGAGAAAAGGTT+TGG - tig0021300:89254-89273 Msa1389820:CDS 40.0%
AGACCCACTAAGAAGTAAAC+TGG + tig0021300:89467-89486 None:intergenic 40.0%
! TAGTGGGTCTTTGTAGTTCT+TGG - tig0021300:89477-89496 Msa1389820:CDS 40.0%
TTAGCACCAAACTACATTGC+TGG - tig0021300:89578-89597 Msa1389820:CDS 40.0%
GAAGTTCCAGCAATGTAGTT+TGG + tig0021300:89587-89606 None:intergenic 40.0%
!!! GCAGCATTTTTTCTGTTCTC+TGG - tig0021300:89626-89645 Msa1389820:CDS 40.0%
TAGCTACAAGGTGCATGATA+TGG - tig0021300:89756-89775 Msa1389820:CDS 40.0%
!! TTACCGTGTGCTTTGTTTCT+TGG - tig0021300:89895-89914 Msa1389820:CDS 40.0%
!!! GTTTTTGGTGGAAGTGGTGA+TGG + tig0021300:88138-88157 None:intergenic 45.0%
CTGTGAGGGAAACATCTTTG+AGG + tig0021300:88275-88294 None:intergenic 45.0%
GGAAGACATGCATCATGTTG+AGG + tig0021300:88462-88481 None:intergenic 45.0%
! TATCTGGTGGTGAACGTAGA+AGG - tig0021300:88622-88641 Msa1389820:CDS 45.0%
! ATCTGGTGGTGAACGTAGAA+GGG - tig0021300:88623-88642 Msa1389820:CDS 45.0%
GAACGTAGAAGGGTCTCTAT+TGG - tig0021300:88633-88652 Msa1389820:CDS 45.0%
CCCTCATCAGCTTAATGCAT+TGG - tig0021300:88920-88939 Msa1389820:CDS 45.0%
GGTGATTCAGGTAAACTTGG+GGG + tig0021300:88999-89018 None:intergenic 45.0%
! GATCAAGAGTGCATGATCAC+TGG - tig0021300:89791-89810 Msa1389820:CDS 45.0%
!!! GTTTTTGGTGGAAGTGGTGA+TGG + tig0021300:88138-88157 None:intergenic 45.0%
CTGTGAGGGAAACATCTTTG+AGG + tig0021300:88275-88294 None:intergenic 45.0%
GGAAGACATGCATCATGTTG+AGG + tig0021300:88462-88481 None:intergenic 45.0%
! TATCTGGTGGTGAACGTAGA+AGG - tig0021300:88622-88641 Msa1389820:CDS 45.0%
! ATCTGGTGGTGAACGTAGAA+GGG - tig0021300:88623-88642 Msa1389820:CDS 45.0%
GAACGTAGAAGGGTCTCTAT+TGG - tig0021300:88633-88652 Msa1389820:CDS 45.0%
CCCTCATCAGCTTAATGCAT+TGG - tig0021300:88920-88939 Msa1389820:CDS 45.0%
GGTGATTCAGGTAAACTTGG+GGG + tig0021300:88999-89018 None:intergenic 45.0%
! GATCAAGAGTGCATGATCAC+TGG - tig0021300:89791-89810 Msa1389820:CDS 45.0%
!! TTGGTGGAAGTGGTGATGGT+TGG + tig0021300:88134-88153 None:intergenic 50.0%
! AGGATGTAGTTTGGTGGGGT+TGG + tig0021300:88255-88274 None:intergenic 50.0%
! CTCAGAAGGGTATGCTGTGA+GGG + tig0021300:88289-88308 None:intergenic 50.0%
! TCTCAGAAGGGTATGCTGTG+AGG + tig0021300:88290-88309 None:intergenic 50.0%
CTTGCCATTGTTGGTCCAAG+TGG - tig0021300:88312-88331 Msa1389820:CDS 50.0%
TGCACCACTTGGACCAACAA+TGG + tig0021300:88319-88338 None:intergenic 50.0%
ATTGTTGGTCCAAGTGGTGC+AGG - tig0021300:88318-88337 Msa1389820:CDS 50.0%
TTGTTGGTCCAAGTGGTGCA+GGG - tig0021300:88319-88338 Msa1389820:CDS 50.0%
! GTTGATTTCCCTGCACCACT+TGG + tig0021300:88330-88349 None:intergenic 50.0%
! CAAGAGTGCATGATCACTGG+TGG - tig0021300:89794-89813 Msa1389820:CDS 50.0%
GTGACGTGTTGCAGAAGAGA+GGG - tig0021300:89816-89835 Msa1389820:CDS 50.0%
!! TTGGTGGAAGTGGTGATGGT+TGG + tig0021300:88134-88153 None:intergenic 50.0%
! AGGATGTAGTTTGGTGGGGT+TGG + tig0021300:88255-88274 None:intergenic 50.0%
! CTCAGAAGGGTATGCTGTGA+GGG + tig0021300:88289-88308 None:intergenic 50.0%
! TCTCAGAAGGGTATGCTGTG+AGG + tig0021300:88290-88309 None:intergenic 50.0%
CTTGCCATTGTTGGTCCAAG+TGG - tig0021300:88312-88331 Msa1389820:CDS 50.0%
TGCACCACTTGGACCAACAA+TGG + tig0021300:88319-88338 None:intergenic 50.0%
ATTGTTGGTCCAAGTGGTGC+AGG - tig0021300:88318-88337 Msa1389820:CDS 50.0%
TTGTTGGTCCAAGTGGTGCA+GGG - tig0021300:88319-88338 Msa1389820:CDS 50.0%
! GTTGATTTCCCTGCACCACT+TGG + tig0021300:88330-88349 None:intergenic 50.0%
! CAAGAGTGCATGATCACTGG+TGG - tig0021300:89794-89813 Msa1389820:CDS 50.0%
GTGACGTGTTGCAGAAGAGA+GGG - tig0021300:89816-89835 Msa1389820:CDS 50.0%
GGTGACGTGTTGCAGAAGAG+AGG - tig0021300:89815-89834 Msa1389820:CDS 55.0%
CAGAAGAGAGGGCTCCATGA+GGG - tig0021300:89827-89846 Msa1389820:CDS 55.0%
TGGTCCATCTCTGTCCCTCA+TGG + tig0021300:89844-89863 None:intergenic 55.0%
GGTGACGTGTTGCAGAAGAG+AGG - tig0021300:89815-89834 Msa1389820:CDS 55.0%
CAGAAGAGAGGGCTCCATGA+GGG - tig0021300:89827-89846 Msa1389820:CDS 55.0%
TGGTCCATCTCTGTCCCTCA+TGG + tig0021300:89844-89863 None:intergenic 55.0%
GCAGAAGAGAGGGCTCCATG+AGG - tig0021300:89826-89845 Msa1389820:CDS 60.0%
GGCTCCATGAGGGACAGAGA+TGG - tig0021300:89837-89856 Msa1389820:CDS 60.0%
GCAGAAGAGAGGGCTCCATG+AGG - tig0021300:89826-89845 Msa1389820:CDS 60.0%
GGCTCCATGAGGGACAGAGA+TGG - tig0021300:89837-89856 Msa1389820:CDS 60.0%
Chromosome Type Strat End Strand Name
tig0021300 gene 88123 89952 88123 ID=Msa1389820;Name=Msa1389820
tig0021300 mRNA 88123 89952 88123 ID=Msa1389820-mRNA-1;Parent=Msa1389820;Name=Msa1389820-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|609
tig0021300 exon 88123 89952 88123 ID=Msa1389820-mRNA-1:exon:11818;Parent=Msa1389820-mRNA-1
tig0021300 CDS 88123 89952 88123 ID=Msa1389820-mRNA-1:cds;Parent=Msa1389820-mRNA-1
Gene Sequence

>Msa1389820

ATGGAAAACCAACCATCACCACTTCCACCAAAAACATACAAACTAACAGCAACTTCAATCTCTTACTCCAAAAACCTACAAACAAACAACACCATCTTTGCACCATTTCTCTTCTTCAAACATTGTACACCAACCCCACCAAACTACATCCTCAAAGATGTTTCCCTCACAGCATACCCTTCTGAGATTCTTGCCATTGTTGGTCCAAGTGGTGCAGGGAAATCAACTCTTCTAGACATTCTTTCAGCTAGAAGATTACCCTTAAGTGGAACACTTTCCCTTAACTCTTCACCTATCAATAACCCTTCTACATTCAGAAAACTCTCTGCTTATGTTCCTCAACATGATGCATGTCTTCCTATGTTAACTGTTTCTGAAACTTTTGCTTTTTCTGCTTCTCTTCTTAAGCCTAAAACCATTGATATTGCTGCCATTGTTTCTTCTCTTTTAAATGAGCTTAGACTCACTCATTTGGCTAATACAAGGCTTAATCATGGTTTATCTGGTGGTGAACGTAGAAGGGTCTCTATTGGACTCAGTCTTCTTCATGATCCTGCTGTTTTGCTACTTGATGAACCTACTTCTGGTCTTGATAGTTCCTCTGCTTTCAAAGTCATGCAAACTCTCAAATCAACTTGTGTTACATATAACAGAACTATTGTTCTTTCCATTCACCAACCAAGTTTCAAGATTCTCTCTTGTATTGATAGAATCTTGCTTCTTTCAAAAGGAACTGTTGTTCATCATGGAAGCTTAGCTTCACTTCAATCATTCTTGCATTCAAAAGGGTTCACTGTCCCTCATCAGCTTAATGCATTGGAATATGCCATGGAAATATTAAACCAATTGAATGAGATTGAACCAATGATTACACCCCCAAGTTTACCTGAATCACCAGAAAATTCTGAATCTCCAATAGGTTGTGCTGTATCTGACAATATTGGAAGAGCTAAAGGTAAAAGCAGAGAGATCAGATACAAGAGTTCAAGGATTCATGAAATTTGTACACTTTTTAGAAGGTTTTGGAAGATCATATACAGAACAAAACAACTACTGTTAACAAACACTGCAGAAGCATTACTTGTTGGTCTTGTTTTAGGAACAATTTACATAAACATTGGGTTTGATAAAGAAGGGATTGAGAAAAGGTTTGGTCTTTTTGCATTCACTCTAACATTCCTCTTATCTTCCACAACTGAAACACTTCCAATTTTTATCAATGAGAGACCAATCTTGTTAAGAGAAACATCAAGTGGTGTTTATAGGCTATCATCTTATCTTATAGCAAATACACTTGTTTTCTTGCCATATTTGCTAGTAGTTGCTGTTATCTACTCTATTCCAGTTTACTTCTTAGTGGGTCTTTGTAGTTCTTGGCTATCTTTTGCTTACTTTGTTTTGGTCATTTGGGTCATAGTTCTTATGGCAAACTCATTTGTTCTGTTCTTGAGTTCTTTAGCACCAAACTACATTGCTGGAACTTCACTCATGACAGTGCTACTTGCAGCATTTTTTCTGTTCTCTGGATACTTTATCTCTAAGGATTGTTTACCTAAGTATTGGCTATTCATGCACTTCTTTTCTATGTACAAATATGCTCTTGATGCACTTCTTATCAATGAGTATTCTTGCTTAGCTACAAGGTGCATGATATGGTTTCAAGAGAATGATCAAGAGTGCATGATCACTGGTGGTGACGTGTTGCAGAAGAGAGGGCTCCATGAGGGACAGAGATGGACCAATGTGTATTTTTTGATTGGATTCTTTGTTTTTTACCGTGTGCTTTGTTTCTTGGTTTTACTTAGAAGGGTTTCAAGATCCAAAACTTGA

Protein sequence

>Msa1389820

MENQPSPLPPKTYKLTATSISYSKNLQTNNTIFAPFLFFKHCTPTPPNYILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSARRLPLSGTLSLNSSPINNPSTFRKLSAYVPQHDACLPMLTVSETFAFSASLLKPKTIDIAAIVSSLLNELRLTHLANTRLNHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSSSAFKVMQTLKSTCVTYNRTIVLSIHQPSFKILSCIDRILLLSKGTVVHHGSLASLQSFLHSKGFTVPHQLNALEYAMEILNQLNEIEPMITPPSLPESPENSESPIGCAVSDNIGRAKGKSREIRYKSSRIHEICTLFRRFWKIIYRTKQLLLTNTAEALLVGLVLGTIYINIGFDKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGVYRLSSYLIANTLVFLPYLLVVAVIYSIPVYFLVGLCSSWLSFAYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLMTVLLAAFFLFSGYFISKDCLPKYWLFMHFFSMYKYALDALLINEYSCLATRCMIWFQENDQECMITGGDVLQKRGLHEGQRWTNVYFLIGFFVFYRVLCFLVLLRRVSRSKT*