AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1022420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1022420 MtrunA17_Chr7g0239061 86.013 622 51 4 1 589 1 619 0.0 1063
Msa1022420 MtrunA17_Chr4g0009751 60.423 614 179 12 13 589 18 604 0.0 654
Msa1022420 MtrunA17_Chr8g0346711 48.403 626 236 15 9 589 24 607 5.66e-177 518
Msa1022420 MtrunA17_Chr2g0276781 45.663 611 254 17 9 581 18 588 1.52e-150 450
Msa1022420 MtrunA17_Chr8g0385791 53.039 362 137 7 8 339 53 411 2.86e-111 353
Msa1022420 MtrunA17_Chr2g0285461 40.800 375 188 8 6 349 15 386 4.45e-72 249
Msa1022420 MtrunA17_Chr4g0046371 36.300 427 203 12 14 386 38 449 8.47e-72 245
Msa1022420 MtrunA17_Chr4g0029671 38.032 376 174 10 12 339 52 416 2.90e-71 245
Msa1022420 MtrunA17_Chr5g0433301 41.210 347 172 6 5 320 15 360 4.65e-71 246
Msa1022420 MtrunA17_Chr8g0376771 40.212 378 185 8 6 349 15 385 2.01e-70 245
Msa1022420 MtrunA17_Chr3g0109391 37.198 414 217 9 11 388 23 429 1.79e-69 241
Msa1022420 MtrunA17_Chr2g0326281 37.838 370 177 7 12 329 54 422 3.12e-69 240
Msa1022420 MtrunA17_Chr2g0282961 36.735 392 186 10 14 356 53 431 1.16e-61 216
Msa1022420 MtrunA17_Chr1g0156321 38.527 353 166 7 6 318 35 376 5.19e-61 218
Msa1022420 MtrunA17_Chr4g0070181 39.045 356 183 8 6 331 15 366 1.01e-55 204
Msa1022420 MtrunA17_Chr2g0301251 38.329 347 180 8 6 321 15 358 3.14e-55 203
Msa1022420 MtrunA17_Chr8g0389081 37.941 340 179 7 14 322 32 370 2.32e-51 191
Msa1022420 MtrunA17_Chr2g0326761 30.000 410 206 11 8 347 5 403 3.96e-40 156
Msa1022420 MtrunA17_Chr4g0028971 29.157 439 205 15 3 350 1 424 4.09e-37 147
Msa1022420 MtrunA17_Chr7g0264171 27.928 444 217 15 14 374 31 454 1.16e-34 139
Msa1022420 MtrunA17_Chr5g0417281 28.363 342 193 8 13 320 10 333 4.64e-33 133
Msa1022420 MtrunA17_Chr1g0199681 28.261 414 210 12 3 343 83 482 1.09e-32 134
Msa1022420 MtrunA17_Chr5g0424931 27.763 389 219 13 14 350 19 397 4.09e-31 127
Msa1022420 MtrunA17_Chr7g0264161 32.246 276 149 8 24 267 2 271 2.50e-30 121
Msa1022420 MtrunA17_Chr5g0436761 28.272 382 200 12 3 337 1 355 6.48e-30 123
Msa1022420 MtrunA17_Chr3g0115271 41.071 168 95 2 11 178 16 179 1.16e-27 117
Msa1022420 MtrunA17_Chr1g0181211 34.783 207 99 4 14 189 27 228 1.77e-27 117
Msa1022420 MtrunA17_Chr1g0178011 26.611 357 221 9 14 340 12 357 1.04e-25 110
Msa1022420 MtrunA17_Chr8g0356211 30.040 253 138 7 124 346 2 245 1.63e-25 107
Msa1022420 MtrunA17_Chr5g0417211 28.664 307 165 11 14 284 12 300 1.95e-24 106
Msa1022420 MtrunA17_Chr2g0289221 28.136 295 152 11 14 267 20 295 2.69e-23 102
Msa1022420 MtrunA17_Chr2g0277461 26.257 358 214 9 14 337 13 354 4.81e-22 99.8
Msa1022420 MtrunA17_Chr5g0424801 23.626 364 220 11 14 340 12 354 7.18e-22 98.2
Msa1022420 MtrunA17_Chr5g0425261 23.901 364 219 11 14 340 12 354 4.51e-21 95.5
Msa1022420 MtrunA17_Chr2g0277531 25.347 288 168 9 11 263 17 292 8.75e-20 90.9
Msa1022420 MtrunA17_Chr5g0425661 32.515 163 102 3 14 173 37 194 2.58e-19 87.8
Msa1022420 MtrunA17_Chr5g0424741 23.896 385 215 14 14 331 12 385 6.98e-18 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1022420 AT4G23980.2 48.315 623 234 18 2 589 1 570 1.01e-162 480
Msa1022420 AT4G23980.1 48.160 625 234 18 2 589 1 572 2.69e-162 479
Msa1022420 AT1G59750.1 42.903 627 261 17 9 589 17 592 1.02e-142 430
Msa1022420 AT1G59750.3 42.903 627 261 17 9 589 17 592 1.02e-142 430
Msa1022420 AT1G59750.4 42.584 627 258 16 9 589 17 587 2.38e-142 429
Msa1022420 AT1G59750.2 42.698 630 255 17 9 589 17 589 3.21e-142 429
Msa1022420 AT3G61830.1 60.440 364 107 6 8 339 19 377 1.35e-140 422
Msa1022420 AT3G61830.1 44.094 127 40 5 463 587 439 536 1.28e-17 87.0
Msa1022420 AT2G46530.1 60.434 369 108 7 8 344 15 377 1.14e-139 420
Msa1022420 AT2G46530.1 38.255 149 69 5 443 589 412 539 5.65e-17 85.1
Msa1022420 AT2G46530.3 60.434 369 108 7 8 344 36 398 3.86e-139 419
Msa1022420 AT2G46530.3 38.255 149 69 5 443 589 433 560 5.64e-17 85.1
Msa1022420 AT1G35540.1 38.376 628 262 18 5 591 18 561 3.48e-129 393
Msa1022420 AT1G34410.1 38.013 634 257 14 5 591 18 562 1.46e-128 392
Msa1022420 AT1G35240.1 37.942 622 260 15 5 591 18 548 9.12e-125 381
Msa1022420 AT1G34310.1 37.876 631 278 16 5 599 18 570 9.91e-125 381
Msa1022420 AT1G35520.1 38.449 619 259 15 11 589 24 560 3.59e-124 380
Msa1022420 AT1G34390.1 37.975 632 258 16 5 591 18 560 4.09e-119 367
Msa1022420 AT5G62000.2 51.538 390 150 9 8 367 55 435 8.20e-119 374
Msa1022420 AT5G62000.2 32.203 177 99 7 432 589 609 783 7.71e-16 82.0
Msa1022420 AT5G62000.5 51.538 390 150 9 8 367 55 435 8.20e-119 374
Msa1022420 AT5G62000.5 32.203 177 99 7 432 589 609 783 7.71e-16 82.0
Msa1022420 AT5G62000.3 51.538 390 150 9 8 367 55 435 8.20e-119 374
Msa1022420 AT5G62000.3 32.203 177 99 7 432 589 609 783 7.71e-16 82.0
Msa1022420 AT5G62000.1 51.538 390 150 9 8 367 55 435 8.20e-119 374
Msa1022420 AT5G62000.1 32.203 177 99 7 432 589 609 783 7.71e-16 82.0
Msa1022420 AT5G62000.4 51.538 390 150 9 8 367 55 435 9.68e-119 374
Msa1022420 AT5G62000.4 32.044 181 102 7 428 589 605 783 7.35e-16 82.0
Msa1022420 AT3G61830.2 58.912 331 99 6 41 339 1 326 2.54e-118 363
Msa1022420 AT3G61830.2 44.094 127 40 5 463 587 388 485 1.02e-17 87.4
Msa1022420 AT2G46530.2 56.028 282 87 6 94 344 15 290 3.66e-89 286
Msa1022420 AT2G46530.2 38.255 149 69 5 443 589 325 452 3.87e-17 85.1
Msa1022420 AT1G34170.1 35.853 516 230 14 2 471 1 461 1.21e-84 274
Msa1022420 AT1G30330.1 39.030 433 214 12 6 399 15 436 8.00e-71 247
Msa1022420 AT1G30330.3 39.030 433 214 12 6 399 17 438 8.34e-71 246
Msa1022420 AT1G30330.2 39.030 433 214 12 6 399 17 438 8.34e-71 246
Msa1022420 AT1G34170.2 34.302 516 212 17 2 471 1 435 1.52e-70 236
Msa1022420 AT1G34170.3 34.302 516 212 17 2 471 1 435 9.69e-70 236
Msa1022420 AT1G34170.3 65.957 47 16 0 543 589 436 482 1.03e-12 71.6
Msa1022420 AT5G37020.2 39.737 380 192 10 6 350 12 389 2.83e-69 240
Msa1022420 AT5G37020.1 39.737 380 192 10 6 350 12 389 5.66e-69 239
Msa1022420 AT5G60450.2 38.158 380 182 12 3 338 30 400 2.29e-66 232
Msa1022420 AT5G60450.2 45.455 66 35 1 525 589 626 691 8.57e-11 65.5
Msa1022420 AT5G60450.1 38.710 372 175 12 11 338 62 424 3.17e-65 229
Msa1022420 AT5G60450.1 45.455 66 35 1 525 589 650 715 9.33e-11 65.5
Msa1022420 AT2G33860.1 36.782 348 166 9 14 319 54 389 4.03e-61 214
Msa1022420 AT1G19850.1 38.938 339 169 8 14 318 54 388 2.66e-60 217
Msa1022420 AT1G19850.2 38.938 339 169 8 14 318 43 377 3.10e-60 216
Msa1022420 AT5G20730.2 37.817 394 192 11 6 361 16 394 1.17e-56 207
Msa1022420 AT5G20730.3 37.722 395 192 11 6 361 16 395 1.83e-56 207
Msa1022420 AT5G20730.1 37.722 395 192 11 6 361 16 395 2.04e-56 207
Msa1022420 AT1G19220.1 38.482 382 181 11 4 343 13 382 6.25e-56 205
Msa1022420 AT1G43950.1 46.890 209 83 4 5 189 18 222 7.45e-56 189
Msa1022420 AT5G37020.3 37.956 274 137 7 108 350 23 294 3.49e-40 157
Msa1022420 AT2G33860.2 36.017 236 114 5 116 319 2 232 1.06e-37 146
Msa1022420 AT4G30080.1 27.845 413 213 10 3 341 8 409 6.00e-37 147
Msa1022420 AT2G28350.1 40.331 181 93 3 7 178 3 177 6.76e-30 125
Msa1022420 AT2G28350.2 40.331 181 93 3 7 178 3 177 7.91e-30 125
Msa1022420 AT1G77850.1 26.107 429 219 16 10 361 15 422 6.02e-25 110
Msa1022420 AT1G77850.2 26.107 429 219 16 10 361 15 422 6.26e-25 110

Find 153 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAGTGACGTTCCAGATTT+TGG 0.157571 7_1:+48640870 Msa1022420:CDS
TTGAGATATCAAACTTATTT+TGG 0.174168 7_1:-48641590 None:intergenic
GACTCTACTTACTGGGAAAA+TGG 0.200322 7_1:+48641117 Msa1022420:CDS
ATGCCTTCATCTGTGATTTC+TGG 0.218236 7_1:+48639872 Msa1022420:CDS
ATACATGATAACAGCTTCTT+TGG 0.226689 7_1:-48637566 None:intergenic
AGATCCATCCTAGGAATAAA+TGG 0.234682 7_1:+48641987 Msa1022420:CDS
TGTTGTAAATGTTCATTTAC+TGG 0.251492 7_1:+48638288 Msa1022420:CDS
TTAATGAAGCTAGTCCATTT+TGG 0.265353 7_1:+48642476 Msa1022420:three_prime_UTR
CTCCTGCTGCAAAATATAAA+AGG 0.298744 7_1:+48640838 Msa1022420:CDS
TCCGCTTCCTTACCAAAATC+TGG 0.302105 7_1:-48640882 None:intergenic
TGAAACTTGTCTAGCCAAAA+TGG 0.302786 7_1:-48642490 None:intergenic
TTGCTGAAGGAGTGAGTTCT+TGG 0.304040 7_1:-48638973 None:intergenic
TATAAGTGTGAATAAGTATA+TGG 0.342092 7_1:+48640084 Msa1022420:CDS
CAGTAGGTGACTCTACTTAC+TGG 0.347101 7_1:+48641109 Msa1022420:intron
TAGTGATGAGATAGGTAATT+TGG 0.349545 7_1:-48642354 None:intergenic
TGCTTGCTTTGTGTTTCATT+TGG 0.354289 7_1:-48641654 None:intergenic
AAGGAGTGAGTTCTTGGTCT+TGG 0.354402 7_1:-48638967 None:intergenic
CTTAGTGCAACTTCTGCTAT+TGG 0.357778 7_1:-48641679 None:intergenic
CAAACTTTGGAGTCTCTAGA+TGG 0.359004 7_1:-48642548 None:intergenic
TGGTCCTTCTCATTTGTGTC+AGG 0.364856 7_1:+48641302 Msa1022420:CDS
ATTCTTGAGTTGGAGTAGAT+TGG 0.366500 7_1:-48639185 None:intergenic
GAGTATGCAGCAAATGTATT+TGG 0.374703 7_1:+48641516 Msa1022420:CDS
ACAATTTCCCATTTATTCCT+AGG 0.375607 7_1:-48641995 None:intergenic
CTACAAGCTGTAGATTGTTC+GGG 0.378856 7_1:+48641451 Msa1022420:CDS
TACATCCTTACATTAGATTC+TGG 0.379009 7_1:-48638815 None:intergenic
ATCTACTCCAACTCAAGAAT+TGG 0.380624 7_1:+48639188 Msa1022420:CDS
TATATTCTCATCAGGTTCAA+TGG 0.382829 7_1:+48640727 Msa1022420:CDS
TTCTTGAGTTGGAGTAGATT+GGG 0.388095 7_1:-48639184 None:intergenic
TATTCACACTTATAATGAAC+TGG 0.400736 7_1:-48640075 None:intergenic
TGTGAGGAAACGGCGTTTGT+TGG 0.403590 7_1:-48637604 None:intergenic
GCTACAAGCTGTAGATTGTT+CGG 0.405817 7_1:+48641450 Msa1022420:CDS
TTGTTTCGAATTTCAAATGA+TGG 0.411292 7_1:+48640674 Msa1022420:CDS
TCCCATGGTGAAATTCTATC+AGG 0.415551 7_1:-48640774 None:intergenic
CTCTCTCTCTTGTGAGGAAA+CGG 0.415720 7_1:-48637614 None:intergenic
GTTAGAAGTATCAACAAATC+AGG 0.423287 7_1:+48638213 Msa1022420:intron
GGACAAGGATCAAGGCTTGT+AGG 0.425783 7_1:-48638934 None:intergenic
ACACGACAAAGGATCTTGTT+GGG 0.429259 7_1:-48638268 None:intergenic
CTTGGTCTTGGAGGTTCGGC+AGG 0.433704 7_1:-48638955 None:intergenic
ATGAACTCTATGAACAGTTA+TGG 0.434802 7_1:+48637941 Msa1022420:CDS
AGTTCTTGGTCTTGGAGGTT+CGG 0.435328 7_1:-48638959 None:intergenic
GAGTGAGTTCTTGGTCTTGG+AGG 0.436921 7_1:-48638964 None:intergenic
AATGTTTAGTGTGCTAGTCT+TGG 0.438194 7_1:+48642670 Msa1022420:three_prime_UTR
GTTTCTTCTAGTGATGAGAT+AGG 0.438418 7_1:-48642362 None:intergenic
ATGTTTAGTGTGCTAGTCTT+GGG 0.446813 7_1:+48642671 Msa1022420:three_prime_UTR
GATGAAGGCATGCAGCTTTG+TGG 0.446909 7_1:-48639860 None:intergenic
TGTGTTTCATTTGGAGATAT+CGG 0.452653 7_1:-48641645 None:intergenic
GATTATGTTATTACCAGTGA+TGG 0.454300 7_1:-48639069 None:intergenic
TCTTCTCATATATTCTCATC+AGG 0.455079 7_1:+48640719 Msa1022420:CDS
CACTTTAAGCATATATTTCG+AGG 0.457499 7_1:+48639240 Msa1022420:CDS
AACTCAAGAATTGGTTGCTA+AGG 0.462478 7_1:+48639197 Msa1022420:CDS
AACACGACAAAGGATCTTGT+TGG 0.463301 7_1:-48638269 None:intergenic
GGAATGACGGTATGCATTTG+TGG 0.463307 7_1:+48641193 Msa1022420:CDS
AGCACAATGATGATGAATAA+TGG 0.463577 7_1:+48637910 Msa1022420:exon
GGTGAAATTCTATCAGGTCT+TGG 0.465108 7_1:-48640768 None:intergenic
TTAGCAACCAATTCTTGAGT+TGG 0.465631 7_1:-48639195 None:intergenic
CGTAGGAGCAGAAGCCAGAA+GGG 0.466622 7_1:-48640805 None:intergenic
AGAGGAAAATATTGAGATTG+TGG 0.466631 7_1:+48642608 Msa1022420:three_prime_UTR
ATAAATTAAGTAGGTGAGAG+AGG 0.468584 7_1:+48642590 Msa1022420:three_prime_UTR
AAGCAAGATGCTGTTTATAG+AGG 0.470500 7_1:+48639794 Msa1022420:intron
AGAGAAGCTGTTTGACATGA+AGG 0.473975 7_1:+48641961 Msa1022420:CDS
CCAAAATCTGGAACGTCACT+AGG 0.476389 7_1:-48640870 None:intergenic
ATATTCTCATCAGGTTCAAT+GGG 0.480064 7_1:+48640728 Msa1022420:CDS
ACTCTACTTACTGGGAAAAT+GGG 0.480110 7_1:+48641118 Msa1022420:CDS
CACAGAATGCCTTCCATCAC+TGG 0.481144 7_1:+48639056 Msa1022420:CDS
TCAAATGCAGGGTGTTGCAG+TGG 0.481218 7_1:+48641883 Msa1022420:CDS
ATGGGAGATAGAACCCCTTC+TGG 0.482103 7_1:+48640791 Msa1022420:CDS
ATGTTATGTCTGAAAACATA+AGG 0.482213 7_1:+48641172 Msa1022420:CDS
GTGAAAAGTGAAAAGTGAAA+AGG 0.483513 7_1:+48637874 Msa1022420:five_prime_UTR
TTTCCCATTTATTCCTAGGA+TGG 0.483618 7_1:-48641991 None:intergenic
CAATGATGATTTGACTGATC+AGG 0.484605 7_1:+48641401 Msa1022420:CDS
GCTGCATACTCAGACACCTT+AGG 0.488235 7_1:-48641504 None:intergenic
CATGTTGAAGTTCCTCGTGC+TGG 0.488356 7_1:+48637982 Msa1022420:CDS
TCATCATTGTCATCATGTAC+TGG 0.488880 7_1:-48637785 None:intergenic
CTGTCAAAAGGTTCAAATGC+AGG 0.492047 7_1:+48641871 Msa1022420:intron
GATCCATCCTAGGAATAAAT+GGG 0.495100 7_1:+48641988 Msa1022420:CDS
GATGTGCACAAAATGAGCTC+AGG 0.496139 7_1:+48642329 Msa1022420:CDS
GGAATCTGACTGACGGAAGT+TGG 0.500296 7_1:+48641259 Msa1022420:CDS
CTGCAAAATATAAAAGGCCT+AGG 0.510234 7_1:+48640844 Msa1022420:CDS
GTCTGCATCAGTTCTTGACA+TGG 0.513254 7_1:-48641568 None:intergenic
TCTCAAAGGCTTCAAAAGAA+AGG 0.513575 7_1:+48641607 Msa1022420:CDS
TAGCAAGAGTGTCGCAGTCT+CGG 0.516524 7_1:+48641338 Msa1022420:CDS
TGTTGCAGTGGGTCGTGCGG+TGG 0.520688 7_1:+48641895 Msa1022420:CDS
AACTCTGATACAAGTACTCA+TGG 0.524293 7_1:+48639006 Msa1022420:CDS
GTTCGGCAGGACAAGGATCA+AGG 0.528735 7_1:-48638942 None:intergenic
TGACCAGAAATCACAGATGA+AGG 0.529054 7_1:-48639875 None:intergenic
TTGTAGTATACTACAAGCCC+AGG 0.533426 7_1:+48639957 Msa1022420:CDS
CTTGGAGGTTCGGCAGGACA+AGG 0.533568 7_1:-48638949 None:intergenic
ATTATTAACTTGTGTTACAT+CGG 0.534603 7_1:-48641151 None:intergenic
ATTTGAAATTCGAAACAAAG+TGG 0.536178 7_1:-48640669 None:intergenic
GGTCCTTCTCATTTGTGTCA+GGG 0.539696 7_1:+48641303 Msa1022420:CDS
GAGAAGCTGTTTGACATGAA+GGG 0.548993 7_1:+48641962 Msa1022420:CDS
AGAGTGTCGCAGTCTCGGCT+TGG 0.549847 7_1:+48641343 Msa1022420:CDS
TCGTAGGAGCAGAAGCCAGA+AGG 0.562413 7_1:-48640806 None:intergenic
CTATCTTCTCCTCATTCAAG+TGG 0.562928 7_1:+48641282 Msa1022420:CDS
GAGAATTACGCGTTGGCGTG+AGG 0.565139 7_1:+48639825 Msa1022420:CDS
CAATAGCAGAAGTTGCACTA+AGG 0.566869 7_1:+48641680 Msa1022420:CDS
AGCAAGATGCTGTTTATAGA+GGG 0.575114 7_1:+48639795 Msa1022420:intron
GTTAGTTAAGACCTTGCTGA+AGG 0.576070 7_1:-48638986 None:intergenic
TGAAGGGACAGATCCATCCT+AGG 0.576311 7_1:+48641978 Msa1022420:CDS
ACGCGGTTGCAAGGACTCCA+AGG 0.576436 7_1:-48639907 None:intergenic
ACTGATAATAGCAGCAGCAA+TGG 0.577521 7_1:+48641228 Msa1022420:CDS
GGAACGTCACTAGGTAGCCT+AGG 0.578373 7_1:-48640861 None:intergenic
GGTTGTCAAGGAGAACAAAA+CGG 0.580030 7_1:+48641422 Msa1022420:CDS
TGAGAAGGACCACTTGAATG+AGG 0.580259 7_1:-48641291 None:intergenic
AGTAGGTGACTCTACTTACT+GGG 0.580726 7_1:+48641110 Msa1022420:intron
ATTCTCCTGAGACTGACAAA+AGG 0.581364 7_1:+48640167 Msa1022420:CDS
TTTGACTGATCAGGTTGTCA+AGG 0.582263 7_1:+48641410 Msa1022420:CDS
CACAATGGAGAATTACGCGT+TGG 0.583091 7_1:+48639818 Msa1022420:CDS
TCCTCGCACGAACACTCCTA+AGG 0.585464 7_1:+48641488 Msa1022420:CDS
TGCGGTGGACTTGACTGCGT+TGG 0.588732 7_1:+48641910 Msa1022420:CDS
CAAATGCAGGGTGTTGCAGT+GGG 0.591983 7_1:+48641884 Msa1022420:CDS
ATGTTATTACCAGTGATGGA+AGG 0.593428 7_1:-48639065 None:intergenic
GTATTTGGAGTCACCTCTGA+GGG 0.593824 7_1:+48641531 Msa1022420:CDS
GTGGACTTGACTGCGTTGGA+TGG 0.595313 7_1:+48641914 Msa1022420:CDS
ATCAGTTCTTGACATGGGAG+CGG 0.595334 7_1:-48641562 None:intergenic
GCAGGAGGTTGAATAGTCGT+AGG 0.595409 7_1:-48640822 None:intergenic
ACTTGTTCCATGTGTCCTTG+AGG 0.595417 7_1:-48638024 None:intergenic
TGTCAAAAGGTTCAAATGCA+GGG 0.595922 7_1:+48641872 Msa1022420:intron
TCTGCATCAGTTCTTGACAT+GGG 0.598480 7_1:-48641567 None:intergenic
AAATAAGTTTGATATCTCAA+AGG 0.603379 7_1:+48641593 Msa1022420:CDS
TGAGTTATATTTGATCAAAG+TGG 0.608419 7_1:+48637852 Msa1022420:five_prime_UTR
ATGTGCACAAAATGAGCTCA+GGG 0.609204 7_1:+48642330 Msa1022420:CDS
ACCTGATAGAATTTCACCAT+GGG 0.610284 7_1:+48640773 Msa1022420:CDS
TCTGAAAACATAAGGAATGA+CGG 0.610544 7_1:+48641180 Msa1022420:CDS
TGCGACACTCTTGCTATCGT+CGG 0.614271 7_1:-48641331 None:intergenic
AGAAGGGGTTCTATCTCCCA+TGG 0.616888 7_1:-48640789 None:intergenic
GGGTGTTGCAGTGGGTCGTG+CGG 0.626070 7_1:+48641892 Msa1022420:CDS
ACCTTAGGAGTGTTCGTGCG+AGG 0.626867 7_1:-48641489 None:intergenic
CAGTTATGGAAAGCTTGTGC+TGG 0.627540 7_1:+48637955 Msa1022420:CDS
GAACATTTACAACACGACAA+AGG 0.630223 7_1:-48638279 None:intergenic
CAAATCAGGAACTAAATCAG+AGG 0.630877 7_1:+48638227 Msa1022420:CDS
TCTGGTCAGAGCATGCACCT+TGG 0.631687 7_1:+48639890 Msa1022420:CDS
TTGTTGGGGAGTTTGAACAA+TGG 0.631762 7_1:-48638253 None:intergenic
CAGTGATGGAAGGCATTCTG+TGG 0.636814 7_1:-48639055 None:intergenic
GTGCCCTGACACAAATGAGA+AGG 0.638054 7_1:-48641306 None:intergenic
CACGACAAAGGATCTTGTTG+GGG 0.639091 7_1:-48638267 None:intergenic
AGGATCTTCACAATTACGAA+TGG 0.640548 7_1:+48639217 Msa1022420:CDS
GGTTTATGCACAGATAACTC+TGG 0.642878 7_1:+48638790 Msa1022420:CDS
GCTGTTTATAGAGGGCACAA+TGG 0.646019 7_1:+48639803 Msa1022420:CDS
AGCGGCAACGCATCCCTCAG+AGG 0.650317 7_1:-48641544 None:intergenic
ATGAGAATATATGAGAAGAG+TGG 0.652641 7_1:-48640715 None:intergenic
TTATCGAGGAATCTGACTGA+CGG 0.657132 7_1:+48641252 Msa1022420:CDS
TGTATTTGGAGTCACCTCTG+AGG 0.658303 7_1:+48641530 Msa1022420:CDS
GCACGAGGAACTTCAACATG+AGG 0.659171 7_1:-48637979 None:intergenic
GACCTGATAGAATTTCACCA+TGG 0.666067 7_1:+48640772 Msa1022420:CDS
GGCTGAACAAGAAACAGATG+AGG 0.666478 7_1:+48638769 Msa1022420:intron
AGTTGCAACAGCATGAGACG+CGG 0.666713 7_1:-48639924 None:intergenic
AAGAACTCACTCCTTCAGCA+AGG 0.678844 7_1:+48638975 Msa1022420:CDS
GTAGGAGCAGAAGCCAGAAG+GGG 0.683231 7_1:-48640804 None:intergenic
GCAGCAGCAATGGTTTATCG+AGG 0.685062 7_1:+48641238 Msa1022420:CDS
AAAACTCTTTGTCCAGCACG+AGG 0.695811 7_1:-48637994 None:intergenic
TCTGATACAAGTACTCATGG+TGG 0.729409 7_1:+48639009 Msa1022420:CDS
TGTCAAGGAGAACAAAACGG+AGG 0.766105 7_1:+48641425 Msa1022420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTGCTT+AGG + chr7_1:48640047-48640066 Msa1022420:intron 10.0%
!!! ATTTTTTTTTTTTCAAACTT+TGG - chr7_1:48642564-48642583 None:intergenic 10.0%
!!! AATGTTTTAATAAATTAAGT+AGG + chr7_1:48642581-48642600 Msa1022420:three_prime_UTR 10.0%
!!! TAGTCTTTTGTATTATAAAA+TGG + chr7_1:48637536-48637555 Msa1022420:five_prime_UTR 15.0%
!!! TTTGTTTTATATGTTTTTTG+TGG + chr7_1:48638185-48638204 Msa1022420:intron 15.0%
!!! TTGTGTTAATCTTTTAATTT+TGG + chr7_1:48638424-48638443 Msa1022420:intron 15.0%
!!! TGTGTTAATCTTTTAATTTT+GGG + chr7_1:48638425-48638444 Msa1022420:intron 15.0%
!! TCATAATCATTAAAATTAGT+GGG - chr7_1:48638479-48638498 None:intergenic 15.0%
!! AAACATTCTTAAAAGAAAAT+TGG - chr7_1:48639129-48639148 None:intergenic 15.0%
!!! TTTTTGATGTAAATTTTTGT+TGG - chr7_1:48639427-48639446 None:intergenic 15.0%
!! TATAACAAAGGATAAAATAA+AGG + chr7_1:48640409-48640428 Msa1022420:intron 15.0%
!!! ATTGGTATTATTATTTTGTA+GGG + chr7_1:48642262-48642281 Msa1022420:intron 15.0%
!!! CTTGATTCTATTTTTTGTTT+TGG + chr7_1:48638154-48638173 Msa1022420:intron 20.0%
!!! TCTATTTTTTGTTTTGGTTA+AGG + chr7_1:48638160-48638179 Msa1022420:intron 20.0%
!! AAACAATAAGAAGAATTCTT+TGG + chr7_1:48638352-48638371 Msa1022420:intron 20.0%
!! GTCATAATCATTAAAATTAG+TGG - chr7_1:48638480-48638499 None:intergenic 20.0%
!!! TTTTAATGATTATGACTATC+TGG + chr7_1:48638484-48638503 Msa1022420:intron 20.0%
!!! AGGTTGTTTTTATTACAATT+TGG + chr7_1:48638513-48638532 Msa1022420:intron 20.0%
!!! GGTTGTTTTTATTACAATTT+GGG + chr7_1:48638514-48638533 Msa1022420:intron 20.0%
!! TCTTCTTTGATTATATGAAT+AGG + chr7_1:48638700-48638719 Msa1022420:intron 20.0%
!! CTTCTTTGATTATATGAATA+GGG + chr7_1:48638701-48638720 Msa1022420:intron 20.0%
!! TTCTTTGATTATATGAATAG+GGG + chr7_1:48638702-48638721 Msa1022420:intron 20.0%
!!! TTGAATTTTGACATGTTTAT+AGG + chr7_1:48638748-48638767 Msa1022420:intron 20.0%
!!! TTCACAAATTTTTTCCAATT+TGG + chr7_1:48638842-48638861 Msa1022420:intron 20.0%
!! AATTGGAGAAAAGAAATTTA+AGG - chr7_1:48638872-48638891 None:intergenic 20.0%
!!! TGGTAATAACATAATCTTTT+TGG + chr7_1:48639076-48639095 Msa1022420:intron 20.0%
!! TATAAGTGTGAATAAGTATA+TGG + chr7_1:48640084-48640103 Msa1022420:CDS 20.0%
!! CAAACTACAGAAATAAAATT+TGG - chr7_1:48640195-48640214 None:intergenic 20.0%
!! TCTTCGAATATATAATGAAA+AGG - chr7_1:48640226-48640245 None:intergenic 20.0%
!! TCTTCGAATATATAATGAAA+AGG - chr7_1:48640226-48640245 None:intergenic 20.0%
!! TTAAGCAATTTGTATAACAA+AGG + chr7_1:48640397-48640416 Msa1022420:intron 20.0%
!! TGAATCATGTATTAGAATTA+GGG - chr7_1:48640543-48640562 None:intergenic 20.0%
!! ATGAATCATGTATTAGAATT+AGG - chr7_1:48640544-48640563 None:intergenic 20.0%
!!! TTTGAAATGAAAACGATTAT+AGG - chr7_1:48640919-48640938 None:intergenic 20.0%
!!! ATTATTAACTTGTGTTACAT+CGG - chr7_1:48641154-48641173 None:intergenic 20.0%
!!! TTGAGATATCAAACTTATTT+TGG - chr7_1:48641593-48641612 None:intergenic 20.0%
!! AAATAAGTTTGATATCTCAA+AGG + chr7_1:48641593-48641612 Msa1022420:CDS 20.0%
!!! CTAACTATACTAAGATTTTT+CGG - chr7_1:48641756-48641775 None:intergenic 20.0%
!! AGTATAGTTAGTAATATGTT+AGG + chr7_1:48641765-48641784 Msa1022420:intron 20.0%
!! TAGTATTCAAATTAATAGTG+AGG - chr7_1:48642237-48642256 None:intergenic 20.0%
!!! CATTGGTATTATTATTTTGT+AGG + chr7_1:48642261-48642280 Msa1022420:intron 20.0%
! TGAGTTATATTTGATCAAAG+TGG + chr7_1:48637852-48637871 Msa1022420:five_prime_UTR 25.0%
! TGTTGTAAATGTTCATTTAC+TGG + chr7_1:48638288-48638307 Msa1022420:CDS 25.0%
!! TCTTATTGTTTTCTCCAAAA+GGG - chr7_1:48638343-48638362 None:intergenic 25.0%
!! TTCTTATTGTTTTCTCCAAA+AGG - chr7_1:48638344-48638363 None:intergenic 25.0%
!! TGGTGTTTTGTAATAATTCA+TGG + chr7_1:48638372-48638391 Msa1022420:intron 25.0%
!! GGTGTTTTGTAATAATTCAT+GGG + chr7_1:48638373-48638392 Msa1022420:intron 25.0%
!!! TTTTTGTCTTTTTTACCCTT+TGG + chr7_1:48638547-48638566 Msa1022420:intron 25.0%
!! AAATTTAAGGTTGACCAAAT+TGG - chr7_1:48638859-48638878 None:intergenic 25.0%
!!! TTTCTTTTCTCCAATTTGTT+TGG + chr7_1:48638876-48638895 Msa1022420:intron 25.0%
! CATTAGAAATCCAAACAAAT+TGG - chr7_1:48638889-48638908 None:intergenic 25.0%
!! CAATTTGTTTGGATTTCTAA+TGG + chr7_1:48638887-48638906 Msa1022420:intron 25.0%
! ATGTTTACTAAAACTATGTC+TGG + chr7_1:48639143-48639162 Msa1022420:intron 25.0%
!! TTTTGTTAAACTACTACTAG+TGG + chr7_1:48639460-48639479 Msa1022420:intron 25.0%
! GAAAGGAAAATCTTAGAATT+TGG - chr7_1:48639569-48639588 None:intergenic 25.0%
!! TAAGATTTTCCTTTCTATTC+AGG + chr7_1:48639574-48639593 Msa1022420:intron 25.0%
!! TTTTCTTAGTTTCCTTCATA+TGG + chr7_1:48639708-48639727 Msa1022420:intron 25.0%
!! AACTAGTAAAAGTTTTACCT+GGG - chr7_1:48639977-48639996 None:intergenic 25.0%
! TATTCACACTTATAATGAAC+TGG - chr7_1:48640078-48640097 None:intergenic 25.0%
! ATCAACCAAAAATTTAGTGT+TGG + chr7_1:48640112-48640131 Msa1022420:CDS 25.0%
! TTATATATTCGAAGACTGTT+TGG + chr7_1:48640231-48640250 Msa1022420:intron 25.0%
! ACATTTATCATATTGCAACA+TGG + chr7_1:48640286-48640305 Msa1022420:intron 25.0%
! TTATATATTCGAAGACTGTT+TGG + chr7_1:48640231-48640250 Msa1022420:intron 25.0%
!! ATTTGAAATTCGAAACAAAG+TGG - chr7_1:48640672-48640691 None:intergenic 25.0%
! TTGTTTCGAATTTCAAATGA+TGG + chr7_1:48640674-48640693 Msa1022420:CDS 25.0%
!! GACTACAAAGTGTAAAATTT+TGG - chr7_1:48640983-48641002 None:intergenic 25.0%
! ATGTTATGTCTGAAAACATA+AGG + chr7_1:48641172-48641191 Msa1022420:CDS 25.0%
! CCATGTAAATAAACAATGTA+TGG - chr7_1:48641713-48641732 None:intergenic 25.0%
! CCATACATTGTTTATTTACA+TGG + chr7_1:48641710-48641729 Msa1022420:intron 25.0%
! AATTTGAATACTATGTGCAT+TGG + chr7_1:48642244-48642263 Msa1022420:intron 25.0%
ATACATGATAACAGCTTCTT+TGG - chr7_1:48637569-48637588 None:intergenic 30.0%
GTGAAAAGTGAAAAGTGAAA+AGG + chr7_1:48637874-48637893 Msa1022420:five_prime_UTR 30.0%
! AGCACAATGATGATGAATAA+TGG + chr7_1:48637910-48637929 Msa1022420:exon 30.0%
ATGAACTCTATGAACAGTTA+TGG + chr7_1:48637941-48637960 Msa1022420:CDS 30.0%
! AGAGTTTTCTATTTTCCTCA+AGG + chr7_1:48638009-48638028 Msa1022420:CDS 30.0%
!!! TGTTCTTTTTTGTTGAGTCT+TGG + chr7_1:48638083-48638102 Msa1022420:intron 30.0%
!!! GTTCTTTTTTGTTGAGTCTT+GGG + chr7_1:48638084-48638103 Msa1022420:intron 30.0%
!! GTTAGAAGTATCAACAAATC+AGG + chr7_1:48638213-48638232 Msa1022420:intron 30.0%
! TCCTATTTTCTTTTCCCTTT+TGG + chr7_1:48638326-48638345 Msa1022420:intron 30.0%
TCCAAAAGGGAAAAGAAAAT+AGG - chr7_1:48638330-48638349 None:intergenic 30.0%
!! TGGGTTTAGTTTCCAATTTT+TGG + chr7_1:48638444-48638463 Msa1022420:intron 30.0%
! TTATGACTATCTGGATTTTG+AGG + chr7_1:48638493-48638512 Msa1022420:intron 30.0%
CGGTCAAACTTTAAATTATC+AGG - chr7_1:48638589-48638608 None:intergenic 30.0%
GTGAATGATGCTTAGAATTT+GGG + chr7_1:48638629-48638648 Msa1022420:intron 30.0%
TACATCCTTACATTAGATTC+TGG - chr7_1:48638818-48638837 None:intergenic 30.0%
GATTATGTTATTACCAGTGA+TGG - chr7_1:48639072-48639091 None:intergenic 30.0%
!! ACTATGTCTGGATTTTGTTT+AGG + chr7_1:48639155-48639174 Msa1022420:intron 30.0%
CACTTTAAGCATATATTTCG+AGG + chr7_1:48639240-48639259 Msa1022420:CDS 30.0%
! TCAGATTTTCCAAGTATATG+TGG + chr7_1:48639313-48639332 Msa1022420:intron 30.0%
CATCATCAATTATTGAACTC+AGG - chr7_1:48639340-48639359 None:intergenic 30.0%
! CAAATCTCGAGTCTTTTTAA+TGG - chr7_1:48639368-48639387 None:intergenic 30.0%
CATGTTCAAGAGAAAACATT+AGG - chr7_1:48639486-48639505 None:intergenic 30.0%
! AAAACCGACTTATCTAATGT+GGG - chr7_1:48639524-48639543 None:intergenic 30.0%
!! ATTAGATAAGTCGGTTTTGT+AGG + chr7_1:48639526-48639545 Msa1022420:intron 30.0%
!! TTAGATAAGTCGGTTTTGTA+GGG + chr7_1:48639527-48639546 Msa1022420:intron 30.0%
! ACTTCAAAAAGATTAGTTGC+TGG + chr7_1:48639643-48639662 Msa1022420:intron 30.0%
! CAACTAGTAAAAGTTTTACC+TGG - chr7_1:48639978-48639997 None:intergenic 30.0%
! TCATGCCAACACTAAATTTT+TGG - chr7_1:48640120-48640139 None:intergenic 30.0%
!! AAAAATTTAGTGTTGGCATG+AGG + chr7_1:48640119-48640138 Msa1022420:CDS 30.0%
!! AGGTTTAAGATGAGTTTTGA+TGG + chr7_1:48640139-48640158 Msa1022420:CDS 30.0%
!! GGTTTAAGATGAGTTTTGAT+GGG + chr7_1:48640140-48640159 Msa1022420:CDS 30.0%
!! GTTTAAGATGAGTTTTGATG+GGG + chr7_1:48640141-48640160 Msa1022420:CDS 30.0%
! TATTTCTGTAGTTTGCAACA+TGG + chr7_1:48640200-48640219 Msa1022420:intron 30.0%
ACTTATTTGAGCTTATCTAC+TGG - chr7_1:48640504-48640523 None:intergenic 30.0%
! ACATGATTCATCAGATTTTC+TGG + chr7_1:48640553-48640572 Msa1022420:intron 30.0%
!! AGATTTTCTGGCACAATAAT+TGG + chr7_1:48640565-48640584 Msa1022420:intron 30.0%
ATGAGAATATATGAGAAGAG+TGG - chr7_1:48640718-48640737 None:intergenic 30.0%
TCTTCTCATATATTCTCATC+AGG + chr7_1:48640719-48640738 Msa1022420:CDS 30.0%
TATATTCTCATCAGGTTCAA+TGG + chr7_1:48640727-48640746 Msa1022420:CDS 30.0%
ATATTCTCATCAGGTTCAAT+GGG + chr7_1:48640728-48640747 Msa1022420:CDS 30.0%
!! GTTTTCATTTCGCTTTTCAA+AGG + chr7_1:48641078-48641097 Msa1022420:intron 30.0%
TCTGAAAACATAAGGAATGA+CGG + chr7_1:48641180-48641199 Msa1022420:CDS 30.0%
!!! TCTGAGTGAGTTTTTGAAAT+AGG - chr7_1:48641369-48641388 None:intergenic 30.0%
TGTGTTTCATTTGGAGATAT+CGG - chr7_1:48641648-48641667 None:intergenic 30.0%
CAATCCACTATTTAACTCTA+TGG + chr7_1:48641817-48641836 Msa1022420:intron 30.0%
ACAATTTCCCATTTATTCCT+AGG - chr7_1:48641998-48642017 None:intergenic 30.0%
TTTGTGTAAAGAGATACTCA+CGG - chr7_1:48642070-48642089 None:intergenic 30.0%
TTACACAAAATTAACCCACT+TGG + chr7_1:48642081-48642100 Msa1022420:intron 30.0%
! TTGTAGGGAATTTTGCAATA+TGG + chr7_1:48642277-48642296 Msa1022420:intron 30.0%
TAGTGATGAGATAGGTAATT+TGG - chr7_1:48642357-48642376 None:intergenic 30.0%
! TTAATGAAGCTAGTCCATTT+TGG + chr7_1:48642476-48642495 Msa1022420:three_prime_UTR 30.0%
ATAAATTAAGTAGGTGAGAG+AGG + chr7_1:48642590-48642609 Msa1022420:three_prime_UTR 30.0%
AGAGGAAAATATTGAGATTG+TGG + chr7_1:48642608-48642627 Msa1022420:three_prime_UTR 30.0%
!! AGAGTGTGTTTTTGTCTGTA+AGG + chr7_1:48637661-48637680 Msa1022420:five_prime_UTR 35.0%
TCATCATTGTCATCATGTAC+TGG - chr7_1:48637788-48637807 None:intergenic 35.0%
ATGTGTTGTGTTATGATGCT+TGG + chr7_1:48638117-48638136 Msa1022420:intron 35.0%
GTGTTATGATGCTTGGAATT+TGG + chr7_1:48638124-48638143 Msa1022420:intron 35.0%
CAAATCAGGAACTAAATCAG+AGG + chr7_1:48638227-48638246 Msa1022420:CDS 35.0%
GAACATTTACAACACGACAA+AGG - chr7_1:48638282-48638301 None:intergenic 35.0%
GGGAAAAGAAAATAGGATGA+AGG - chr7_1:48638323-48638342 None:intergenic 35.0%
GGGAGAACATTACCAAAAAT+TGG - chr7_1:48638459-48638478 None:intergenic 35.0%
CGTGAATGATGCTTAGAATT+TGG + chr7_1:48638628-48638647 Msa1022420:intron 35.0%
TGATTATATGAATAGGGGTG+TGG + chr7_1:48638707-48638726 Msa1022420:intron 35.0%
! GATTATATGAATAGGGGTGT+GGG + chr7_1:48638708-48638727 Msa1022420:intron 35.0%
TGGTACCAGAATCTAATGTA+AGG + chr7_1:48638810-48638829 Msa1022420:intron 35.0%
!! CTCAGTTTGCTAAGCAAATT+CGG - chr7_1:48638914-48638933 None:intergenic 35.0%
AACTCTGATACAAGTACTCA+TGG + chr7_1:48639006-48639025 Msa1022420:CDS 35.0%
! ATGTTATTACCAGTGATGGA+AGG - chr7_1:48639068-48639087 None:intergenic 35.0%
!! TTCTTGAGTTGGAGTAGATT+GGG - chr7_1:48639187-48639206 None:intergenic 35.0%
!! ATTCTTGAGTTGGAGTAGAT+TGG - chr7_1:48639188-48639207 None:intergenic 35.0%
ATCTACTCCAACTCAAGAAT+TGG + chr7_1:48639188-48639207 Msa1022420:CDS 35.0%
TTAGCAACCAATTCTTGAGT+TGG - chr7_1:48639198-48639217 None:intergenic 35.0%
AACTCAAGAATTGGTTGCTA+AGG + chr7_1:48639197-48639216 Msa1022420:CDS 35.0%
AGGATCTTCACAATTACGAA+TGG + chr7_1:48639217-48639236 Msa1022420:CDS 35.0%
! ATGTGTTGATCCAAGTAGAA+GGG + chr7_1:48639288-48639307 Msa1022420:intron 35.0%
! AAGACTCGAGATTTGTCTTT+TGG + chr7_1:48639373-48639392 Msa1022420:intron 35.0%
!! TTTGTCTTTTGGCTACTTGA+TGG + chr7_1:48639384-48639403 Msa1022420:intron 35.0%
ACTTGATGGAAGAATACTCT+TGG + chr7_1:48639398-48639417 Msa1022420:intron 35.0%
AAGTCCCACATTAGATAAGT+CGG + chr7_1:48639517-48639536 Msa1022420:intron 35.0%
! CAAAACCGACTTATCTAATG+TGG - chr7_1:48639525-48639544 None:intergenic 35.0%
! TGATTTTCTGAGCCATATGA+AGG - chr7_1:48639723-48639742 None:intergenic 35.0%
! AAGCAAGATGCTGTTTATAG+AGG + chr7_1:48639794-48639813 Msa1022420:intron 35.0%
! AGCAAGATGCTGTTTATAGA+GGG + chr7_1:48639795-48639814 Msa1022420:intron 35.0%
TAACTATAGATCGTCTTTCG+TGG + chr7_1:48640004-48640023 Msa1022420:intron 35.0%
TTCGTGGATAAATCTTGACA+AGG + chr7_1:48640020-48640039 Msa1022420:intron 35.0%
TCGTGGATAAATCTTGACAA+GGG + chr7_1:48640021-48640040 Msa1022420:intron 35.0%
AAGAGGATATTTCTTCACAC+TGG + chr7_1:48640590-48640609 Msa1022420:intron 35.0%
! CACACTGGTTGAATTCAAAA+TGG + chr7_1:48640605-48640624 Msa1022420:intron 35.0%
TTCAAAATGGAGATCACTCA+AGG + chr7_1:48640618-48640637 Msa1022420:intron 35.0%
ACCTGATAGAATTTCACCAT+GGG + chr7_1:48640773-48640792 Msa1022420:CDS 35.0%
! CTTTTATATTTTGCAGCAGG+AGG - chr7_1:48640840-48640859 None:intergenic 35.0%
CTCCTGCTGCAAAATATAAA+AGG + chr7_1:48640838-48640857 Msa1022420:CDS 35.0%
CTGCAAAATATAAAAGGCCT+AGG + chr7_1:48640844-48640863 Msa1022420:CDS 35.0%
! ATCGATTCCAGCTTTAGTTA+AGG + chr7_1:48640938-48640957 Msa1022420:intron 35.0%
AATAGAGCCTTAACTAAAGC+TGG - chr7_1:48640948-48640967 None:intergenic 35.0%
ACTAAGTCTAACCCTACTAA+GGG - chr7_1:48641028-48641047 None:intergenic 35.0%
ACTCTACTTACTGGGAAAAT+GGG + chr7_1:48641118-48641137 Msa1022420:CDS 35.0%
CAATGATGATTTGACTGATC+AGG + chr7_1:48641401-48641420 Msa1022420:CDS 35.0%
GAGTATGCAGCAAATGTATT+TGG + chr7_1:48641516-48641535 Msa1022420:CDS 35.0%
TCTCAAAGGCTTCAAAAGAA+AGG + chr7_1:48641607-48641626 Msa1022420:CDS 35.0%
TGCTTGCTTTGTGTTTCATT+TGG - chr7_1:48641657-48641676 None:intergenic 35.0%
TGGATTGATAAAGAGAACGA+TGG - chr7_1:48641804-48641823 None:intergenic 35.0%
! TTTGAACCTTTTGACAGGTT+TGG - chr7_1:48641868-48641887 None:intergenic 35.0%
TGTCAAAAGGTTCAAATGCA+GGG + chr7_1:48641872-48641891 Msa1022420:intron 35.0%
AGATCCATCCTAGGAATAAA+TGG + chr7_1:48641987-48642006 Msa1022420:CDS 35.0%
GATCCATCCTAGGAATAAAT+GGG + chr7_1:48641988-48642007 Msa1022420:CDS 35.0%
TTTCCCATTTATTCCTAGGA+TGG - chr7_1:48641994-48642013 None:intergenic 35.0%
! ATTGTCTTCACTGATGATGA+AGG + chr7_1:48642013-48642032 Msa1022420:intron 35.0%
! TTGTCTTCACTGATGATGAA+GGG + chr7_1:48642014-48642033 Msa1022420:intron 35.0%
CAAAATTAACCCACTTGGAT+TGG + chr7_1:48642086-48642105 Msa1022420:intron 35.0%
GTTTCTTCTAGTGATGAGAT+AGG - chr7_1:48642365-48642384 None:intergenic 35.0%
TGAAACTTGTCTAGCCAAAA+TGG - chr7_1:48642493-48642512 None:intergenic 35.0%
! AATGTTTAGTGTGCTAGTCT+TGG + chr7_1:48642670-48642689 Msa1022420:three_prime_UTR 35.0%
!! ATGTTTAGTGTGCTAGTCTT+GGG + chr7_1:48642671-48642690 Msa1022420:three_prime_UTR 35.0%
! CTATTTTCCTCAAGGACACA+TGG + chr7_1:48638017-48638036 Msa1022420:CDS 40.0%
TTGTTGGGGAGTTTGAACAA+TGG - chr7_1:48638256-48638275 None:intergenic 40.0%
ACACGACAAAGGATCTTGTT+GGG - chr7_1:48638271-48638290 None:intergenic 40.0%
AACACGACAAAGGATCTTGT+TGG - chr7_1:48638272-48638291 None:intergenic 40.0%
TCATGGGTCAAATGTTCATC+TGG + chr7_1:48638389-48638408 Msa1022420:intron 40.0%
CATGGGTCAAATGTTCATCT+GGG + chr7_1:48638390-48638409 Msa1022420:intron 40.0%
!!! TCTTTTTTACCCTTTGGTCC+CGG + chr7_1:48638553-48638572 Msa1022420:intron 40.0%
GTCAGACTTTACTTGACTCT+CGG - chr7_1:48638609-48638628 None:intergenic 40.0%
GGTTTATGCACAGATAACTC+TGG + chr7_1:48638790-48638809 Msa1022420:CDS 40.0%
GTTAGTTAAGACCTTGCTGA+AGG - chr7_1:48638989-48639008 None:intergenic 40.0%
TCTGATACAAGTACTCATGG+TGG + chr7_1:48639009-48639028 Msa1022420:CDS 40.0%
! ATGGTGGCTTTTCTGTTCTT+CGG + chr7_1:48639025-48639044 Msa1022420:CDS 40.0%
! CATGTGTTGATCCAAGTAGA+AGG + chr7_1:48639287-48639306 Msa1022420:intron 40.0%
AAATCTGAGTCCCTTCTACT+TGG - chr7_1:48639301-48639320 None:intergenic 40.0%
AACTCAGGACCACATATACT+TGG - chr7_1:48639325-48639344 None:intergenic 40.0%
! GAGATACGTTTGTGTTTCTG+AGG + chr7_1:48639665-48639684 Msa1022420:intron 40.0%
ATGCCTTCATCTGTGATTTC+TGG + chr7_1:48639872-48639891 Msa1022420:CDS 40.0%
TGACCAGAAATCACAGATGA+AGG - chr7_1:48639878-48639897 None:intergenic 40.0%
TTGTAGTATACTACAAGCCC+AGG + chr7_1:48639957-48639976 Msa1022420:CDS 40.0%
ATTCTCCTGAGACTGACAAA+AGG + chr7_1:48640167-48640186 Msa1022420:CDS 40.0%
TTATCTACTGGCATAAGCAC+TGG - chr7_1:48640492-48640511 None:intergenic 40.0%
TGGCACAATAATTGGACAAG+AGG + chr7_1:48640573-48640592 Msa1022420:intron 40.0%
GGTGAAATTCTATCAGGTCT+TGG - chr7_1:48640771-48640790 None:intergenic 40.0%
GACCTGATAGAATTTCACCA+TGG + chr7_1:48640772-48640791 Msa1022420:CDS 40.0%
TCCCATGGTGAAATTCTATC+AGG - chr7_1:48640777-48640796 None:intergenic 40.0%
! GGCCTTTTATATTTTGCAGC+AGG - chr7_1:48640843-48640862 None:intergenic 40.0%
!! TGACGTTCCAGATTTTGGTA+AGG + chr7_1:48640875-48640894 Msa1022420:intron 40.0%
!! TCCAGATTTTGGTAAGGAAG+CGG + chr7_1:48640881-48640900 Msa1022420:intron 40.0%
TGGTAAGGAAGCGGAATATT+TGG + chr7_1:48640890-48640909 Msa1022420:intron 40.0%
CACTAAGTCTAACCCTACTA+AGG - chr7_1:48641029-48641048 None:intergenic 40.0%
CTTAGTAGGGTTAGACTTAG+TGG + chr7_1:48641027-48641046 Msa1022420:intron 40.0%
AGACTTAGTGGCGTTATACT+TGG + chr7_1:48641039-48641058 Msa1022420:intron 40.0%
TTCAAAGGAGACACAACAGT+AGG + chr7_1:48641093-48641112 Msa1022420:intron 40.0%
AGTAGGTGACTCTACTTACT+GGG + chr7_1:48641110-48641129 Msa1022420:intron 40.0%
GACTCTACTTACTGGGAAAA+TGG + chr7_1:48641117-48641136 Msa1022420:CDS 40.0%
ACTGATAATAGCAGCAGCAA+TGG + chr7_1:48641228-48641247 Msa1022420:CDS 40.0%
TTATCGAGGAATCTGACTGA+CGG + chr7_1:48641252-48641271 Msa1022420:CDS 40.0%
CTATCTTCTCCTCATTCAAG+TGG + chr7_1:48641282-48641301 Msa1022420:CDS 40.0%
! TTTGACTGATCAGGTTGTCA+AGG + chr7_1:48641410-48641429 Msa1022420:CDS 40.0%
GGTTGTCAAGGAGAACAAAA+CGG + chr7_1:48641422-48641441 Msa1022420:CDS 40.0%
GCTACAAGCTGTAGATTGTT+CGG + chr7_1:48641450-48641469 Msa1022420:CDS 40.0%
CTACAAGCTGTAGATTGTTC+GGG + chr7_1:48641451-48641470 Msa1022420:CDS 40.0%
TCTGCATCAGTTCTTGACAT+GGG - chr7_1:48641570-48641589 None:intergenic 40.0%
CTTAGTGCAACTTCTGCTAT+TGG - chr7_1:48641682-48641701 None:intergenic 40.0%
CAATAGCAGAAGTTGCACTA+AGG + chr7_1:48641680-48641699 Msa1022420:CDS 40.0%
CAGGCCATAGAGTTAAATAG+TGG - chr7_1:48641824-48641843 None:intergenic 40.0%
CACAATGAACAATTCAGAGC+AGG - chr7_1:48641843-48641862 None:intergenic 40.0%
TGTGTTCCAAACCTGTCAAA+AGG + chr7_1:48641859-48641878 Msa1022420:intron 40.0%
! CTGCATTTGAACCTTTTGAC+AGG - chr7_1:48641873-48641892 None:intergenic 40.0%
CTGTCAAAAGGTTCAAATGC+AGG + chr7_1:48641871-48641890 Msa1022420:intron 40.0%
AGAGAAGCTGTTTGACATGA+AGG + chr7_1:48641961-48641980 Msa1022420:CDS 40.0%
GAGAAGCTGTTTGACATGAA+GGG + chr7_1:48641962-48641981 Msa1022420:CDS 40.0%
! TGTCTTCACTGATGATGAAG+GGG + chr7_1:48642015-48642034 Msa1022420:intron 40.0%
! AGCTCATTTTGTGCACATCT+TGG - chr7_1:48642328-48642347 None:intergenic 40.0%
ATGTGCACAAAATGAGCTCA+GGG + chr7_1:48642330-48642349 Msa1022420:CDS 40.0%
!! CAAACTTTGGAGTCTCTAGA+TGG - chr7_1:48642551-48642570 None:intergenic 40.0%
CTCTCTCTCTTGTGAGGAAA+CGG - chr7_1:48637617-48637636 None:intergenic 45.0%
CAGTTATGGAAAGCTTGTGC+TGG + chr7_1:48637955-48637974 Msa1022420:CDS 45.0%
AAAACTCTTTGTCCAGCACG+AGG - chr7_1:48637997-48638016 None:intergenic 45.0%
ACTTGTTCCATGTGTCCTTG+AGG - chr7_1:48638027-48638046 None:intergenic 45.0%
CACGACAAAGGATCTTGTTG+GGG - chr7_1:48638270-48638289 None:intergenic 45.0%
!!! CTTTTTTACCCTTTGGTCCC+GGG + chr7_1:48638554-48638573 Msa1022420:intron 45.0%
!!! TTTTTTACCCTTTGGTCCCG+GGG + chr7_1:48638555-48638574 Msa1022420:intron 45.0%
TCGAACACTTGTGATCGCTT+TGG + chr7_1:48638674-48638693 Msa1022420:intron 45.0%
GGCTGAACAAGAAACAGATG+AGG + chr7_1:48638769-48638788 Msa1022420:intron 45.0%
!! AGTTCTTGGTCTTGGAGGTT+CGG - chr7_1:48638962-48638981 None:intergenic 45.0%
AAGGAGTGAGTTCTTGGTCT+TGG - chr7_1:48638970-48638989 None:intergenic 45.0%
TTGCTGAAGGAGTGAGTTCT+TGG - chr7_1:48638976-48638995 None:intergenic 45.0%
AAGAACTCACTCCTTCAGCA+AGG + chr7_1:48638975-48638994 Msa1022420:CDS 45.0%
CGTGGTTGACCTGAATAGAA+AGG - chr7_1:48639586-48639605 None:intergenic 45.0%
GACATTTGCTCACAACTGGA+TGG + chr7_1:48639608-48639627 Msa1022420:intron 45.0%
! GCTGTTTATAGAGGGCACAA+TGG + chr7_1:48639803-48639822 Msa1022420:CDS 45.0%
CACAATGGAGAATTACGCGT+TGG + chr7_1:48639818-48639837 Msa1022420:CDS 45.0%
! TGGTACCTTTTGTCAGTCTC+AGG - chr7_1:48640175-48640194 None:intergenic 45.0%
! CCAAAATCTGGAACGTCACT+AGG - chr7_1:48640873-48640892 None:intergenic 45.0%
! CCTAGTGACGTTCCAGATTT+TGG + chr7_1:48640870-48640889 Msa1022420:CDS 45.0%
TCCGCTTCCTTACCAAAATC+TGG - chr7_1:48640885-48640904 None:intergenic 45.0%
AAGTCTAACCCTACTAAGGG+AGG - chr7_1:48641025-48641044 None:intergenic 45.0%
CAGTAGGTGACTCTACTTAC+TGG + chr7_1:48641109-48641128 Msa1022420:intron 45.0%
GGAATGACGGTATGCATTTG+TGG + chr7_1:48641193-48641212 Msa1022420:CDS 45.0%
TGAGAAGGACCACTTGAATG+AGG - chr7_1:48641294-48641313 None:intergenic 45.0%
TGGTCCTTCTCATTTGTGTC+AGG + chr7_1:48641302-48641321 Msa1022420:CDS 45.0%
GGTCCTTCTCATTTGTGTCA+GGG + chr7_1:48641303-48641322 Msa1022420:CDS 45.0%
TGTCAAGGAGAACAAAACGG+AGG + chr7_1:48641425-48641444 Msa1022420:CDS 45.0%
! TGTATTTGGAGTCACCTCTG+AGG + chr7_1:48641530-48641549 Msa1022420:CDS 45.0%
! GTATTTGGAGTCACCTCTGA+GGG + chr7_1:48641531-48641550 Msa1022420:CDS 45.0%
ATCAGTTCTTGACATGGGAG+CGG - chr7_1:48641565-48641584 None:intergenic 45.0%
GTCTGCATCAGTTCTTGACA+TGG - chr7_1:48641571-48641590 None:intergenic 45.0%
GAAGGGGATATGATGCTTGT+TGG + chr7_1:48642031-48642050 Msa1022420:intron 45.0%
!! TGCTTGTTGGTGATGATCCA+TGG + chr7_1:48642044-48642063 Msa1022420:intron 45.0%
TAAAGAGATACTCACGGCCA+TGG - chr7_1:48642064-48642083 None:intergenic 45.0%
!! GTGGTATTGACTTGAGACCT+GGG + chr7_1:48642113-48642132 Msa1022420:intron 45.0%
! CATTTTGTGCACATCTTGGC+TGG - chr7_1:48642324-48642343 None:intergenic 45.0%
GATGTGCACAAAATGAGCTC+AGG + chr7_1:48642329-48642348 Msa1022420:CDS 45.0%
TGTGAGGAAACGGCGTTTGT+TGG - chr7_1:48637607-48637626 None:intergenic 50.0%
CTCTCTCTCTCTCTCTTGTG+AGG - chr7_1:48637623-48637642 None:intergenic 50.0%
GCACGAGGAACTTCAACATG+AGG - chr7_1:48637982-48638001 None:intergenic 50.0%
CATGTTGAAGTTCCTCGTGC+TGG + chr7_1:48637982-48638001 Msa1022420:CDS 50.0%
! TTTTTACCCTTTGGTCCCGG+GGG + chr7_1:48638556-48638575 Msa1022420:intron 50.0%
GGACAAGGATCAAGGCTTGT+AGG - chr7_1:48638937-48638956 None:intergenic 50.0%
!! GAGTGAGTTCTTGGTCTTGG+AGG - chr7_1:48638967-48638986 None:intergenic 50.0%
!! CAGTGATGGAAGGCATTCTG+TGG - chr7_1:48639058-48639077 None:intergenic 50.0%
CACAGAATGCCTTCCATCAC+TGG + chr7_1:48639056-48639075 Msa1022420:CDS 50.0%
GTTGTGAGCAAATGTCGACG+TGG - chr7_1:48639604-48639623 None:intergenic 50.0%
CGTCGACATTTGCTCACAAC+TGG + chr7_1:48639604-48639623 Msa1022420:intron 50.0%
! GATGAAGGCATGCAGCTTTG+TGG - chr7_1:48639863-48639882 None:intergenic 50.0%
AGTTGCAACAGCATGAGACG+CGG - chr7_1:48639927-48639946 None:intergenic 50.0%
!! TAAGCACTGGCGAGACAGTT+CGG - chr7_1:48640479-48640498 None:intergenic 50.0%
AGAAGGGGTTCTATCTCCCA+TGG - chr7_1:48640792-48640811 None:intergenic 50.0%
ATGGGAGATAGAACCCCTTC+TGG + chr7_1:48640791-48640810 Msa1022420:CDS 50.0%
GCAGGAGGTTGAATAGTCGT+AGG - chr7_1:48640825-48640844 None:intergenic 50.0%
ACTAAGGGAGGTCAGCTACA+TGG - chr7_1:48641013-48641032 None:intergenic 50.0%
TGTAGCTGACCTCCCTTAGT+AGG + chr7_1:48641013-48641032 Msa1022420:intron 50.0%
GTAGCTGACCTCCCTTAGTA+GGG + chr7_1:48641014-48641033 Msa1022420:intron 50.0%
GCAGCAGCAATGGTTTATCG+AGG + chr7_1:48641238-48641257 Msa1022420:CDS 50.0%
GGAATCTGACTGACGGAAGT+TGG + chr7_1:48641259-48641278 Msa1022420:CDS 50.0%
GTGCCCTGACACAAATGAGA+AGG - chr7_1:48641309-48641328 None:intergenic 50.0%
! TGCGACACTCTTGCTATCGT+CGG - chr7_1:48641334-48641353 None:intergenic 50.0%
!! TAGCAAGAGTGTCGCAGTCT+CGG + chr7_1:48641338-48641357 Msa1022420:CDS 50.0%
GCTGCATACTCAGACACCTT+AGG - chr7_1:48641507-48641526 None:intergenic 50.0%
!! TCAAATGCAGGGTGTTGCAG+TGG + chr7_1:48641883-48641902 Msa1022420:CDS 50.0%
!! CAAATGCAGGGTGTTGCAGT+GGG + chr7_1:48641884-48641903 Msa1022420:CDS 50.0%
TGAAGGGACAGATCCATCCT+AGG + chr7_1:48641978-48641997 Msa1022420:CDS 50.0%
!! TTAACCCACTTGGATTGGCC+TGG + chr7_1:48642091-48642110 Msa1022420:intron 50.0%
GGTCTCAAGTCAATACCACC+AGG - chr7_1:48642112-48642131 None:intergenic 50.0%
!! GGTGGTATTGACTTGAGACC+TGG + chr7_1:48642112-48642131 Msa1022420:intron 50.0%
GAATCGAACCTGAGACCTTG+AGG - chr7_1:48642150-48642169 None:intergenic 50.0%
GTCTCAGGTTCGATTCTTCC+TGG + chr7_1:48642154-48642173 Msa1022420:intron 50.0%
! TTCCTGGTGCCAAGTTTGAG+TGG + chr7_1:48642170-48642189 Msa1022420:intron 50.0%
! TCCTGGTGCCAAGTTTGAGT+GGG + chr7_1:48642171-48642190 Msa1022420:intron 50.0%
! GCGATTAGCCCACTCAAACT+TGG - chr7_1:48642182-48642201 None:intergenic 50.0%
ATTATCAGGACCCCTTCCCC+CGG - chr7_1:48638575-48638594 None:intergenic 55.0%
GTTCGGCAGGACAAGGATCA+AGG - chr7_1:48638945-48638964 None:intergenic 55.0%
!! CGGTTTTGTAGGGTCGAGTC+AGG + chr7_1:48639537-48639556 Msa1022420:intron 55.0%
! GAGAATTACGCGTTGGCGTG+AGG + chr7_1:48639825-48639844 Msa1022420:CDS 55.0%
TCTGGTCAGAGCATGCACCT+TGG + chr7_1:48639890-48639909 Msa1022420:CDS 55.0%
!! AAGCACTGGCGAGACAGTTC+GGG - chr7_1:48640478-48640497 None:intergenic 55.0%
GTAGGAGCAGAAGCCAGAAG+GGG - chr7_1:48640807-48640826 None:intergenic 55.0%
CGTAGGAGCAGAAGCCAGAA+GGG - chr7_1:48640808-48640827 None:intergenic 55.0%
TCGTAGGAGCAGAAGCCAGA+AGG - chr7_1:48640809-48640828 None:intergenic 55.0%
GGAACGTCACTAGGTAGCCT+AGG - chr7_1:48640864-48640883 None:intergenic 55.0%
TCCTCGCACGAACACTCCTA+AGG + chr7_1:48641488-48641507 Msa1022420:CDS 55.0%
!! ACCTTAGGAGTGTTCGTGCG+AGG - chr7_1:48641492-48641511 None:intergenic 55.0%
GTGGACTTGACTGCGTTGGA+TGG + chr7_1:48641914-48641933 Msa1022420:CDS 55.0%
ACCACCAGGCCAATCCAAGT+GGG - chr7_1:48642098-48642117 None:intergenic 55.0%
TACCACCAGGCCAATCCAAG+TGG - chr7_1:48642099-48642118 None:intergenic 55.0%
TCGAACCTGAGACCTTGAGG+AGG - chr7_1:48642147-48642166 None:intergenic 55.0%
TTATCAGGACCCCTTCCCCC+GGG - chr7_1:48638574-48638593 None:intergenic 60.0%
CTTGGAGGTTCGGCAGGACA+AGG - chr7_1:48638952-48638971 None:intergenic 60.0%
!! CTTGGTCTTGGAGGTTCGGC+AGG - chr7_1:48638958-48638977 None:intergenic 60.0%
ACGCGGTTGCAAGGACTCCA+AGG - chr7_1:48639910-48639929 None:intergenic 60.0%
CAGCATGAGACGCGGTTGCA+AGG - chr7_1:48639919-48639938 None:intergenic 60.0%
!! AGAGTGTCGCAGTCTCGGCT+TGG + chr7_1:48641343-48641362 Msa1022420:CDS 60.0%
! TGCGGTGGACTTGACTGCGT+TGG + chr7_1:48641910-48641929 Msa1022420:CDS 60.0%
!! ACCCACTTGGATTGGCCTGG+TGG + chr7_1:48642094-48642113 Msa1022420:intron 60.0%
! TTGAGGAGGAGCACACTCCC+AGG - chr7_1:48642133-48642152 None:intergenic 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG + chr7_1:48642132-48642151 Msa1022420:intron 60.0%
GTGCTCCTCCTCAAGGTCTC+AGG + chr7_1:48642139-48642158 Msa1022420:intron 60.0%
GCCCACTCAAACTTGGCACC+AGG - chr7_1:48642175-48642194 None:intergenic 60.0%
TACCCTTTGGTCCCGGGGGA+AGG + chr7_1:48638560-48638579 Msa1022420:intron 65.0%
ACCCTTTGGTCCCGGGGGAA+GGG + chr7_1:48638561-48638580 Msa1022420:intron 65.0%
AGCGGCAACGCATCCCTCAG+AGG - chr7_1:48641547-48641566 None:intergenic 65.0%
! GGGTGTTGCAGTGGGTCGTG+CGG + chr7_1:48641892-48641911 Msa1022420:CDS 65.0%
TGTTGCAGTGGGTCGTGCGG+TGG + chr7_1:48641895-48641914 Msa1022420:CDS 65.0%
CCCCTTCCCCCGGGACCAAA+GGG - chr7_1:48638565-48638584 None:intergenic 70.0%
CCCTTTGGTCCCGGGGGAAG+GGG + chr7_1:48638562-48638581 Msa1022420:intron 70.0%
ACCCCTTCCCCCGGGACCAA+AGG - chr7_1:48638566-48638585 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 48637518 48642706 48637518 ID=Msa1022420;Name=Msa1022420
chr7_1 mRNA 48637518 48642706 48637518 ID=Msa1022420-mRNA-1;Parent=Msa1022420;Name=Msa1022420-mRNA-1;_AED=0.10;_eAED=0.10;_QI=398|0.6|0.63|1|1|1|11|298|630
chr7_1 exon 48637518 48638044 48637518 ID=Msa1022420-mRNA-1:exon:9526;Parent=Msa1022420-mRNA-1
chr7_1 exon 48638214 48638309 48638214 ID=Msa1022420-mRNA-1:exon:9527;Parent=Msa1022420-mRNA-1
chr7_1 exon 48638770 48638826 48638770 ID=Msa1022420-mRNA-1:exon:9528;Parent=Msa1022420-mRNA-1
chr7_1 exon 48638925 48639077 48638925 ID=Msa1022420-mRNA-1:exon:9529;Parent=Msa1022420-mRNA-1
chr7_1 exon 48639177 48639261 48639177 ID=Msa1022420-mRNA-1:exon:9530;Parent=Msa1022420-mRNA-1
chr7_1 exon 48639801 48639978 48639801 ID=Msa1022420-mRNA-1:exon:9531;Parent=Msa1022420-mRNA-1
chr7_1 exon 48640069 48640188 48640069 ID=Msa1022420-mRNA-1:exon:9532;Parent=Msa1022420-mRNA-1
chr7_1 exon 48640668 48640891 48640668 ID=Msa1022420-mRNA-1:exon:9533;Parent=Msa1022420-mRNA-1
chr7_1 exon 48641112 48641701 48641112 ID=Msa1022420-mRNA-1:exon:9534;Parent=Msa1022420-mRNA-1
chr7_1 exon 48641881 48642015 48641881 ID=Msa1022420-mRNA-1:exon:9535;Parent=Msa1022420-mRNA-1
chr7_1 exon 48642283 48642706 48642283 ID=Msa1022420-mRNA-1:exon:9536;Parent=Msa1022420-mRNA-1
chr7_1 five_prime_UTR 48637518 48637915 48637518 ID=Msa1022420-mRNA-1:five_prime_utr;Parent=Msa1022420-mRNA-1
chr7_1 CDS 48637916 48638044 48637916 ID=Msa1022420-mRNA-1:cds;Parent=Msa1022420-mRNA-1
chr7_1 CDS 48638214 48638309 48638214 ID=Msa1022420-mRNA-1:cds;Parent=Msa1022420-mRNA-1
chr7_1 CDS 48638770 48638826 48638770 ID=Msa1022420-mRNA-1:cds;Parent=Msa1022420-mRNA-1
chr7_1 CDS 48638925 48639077 48638925 ID=Msa1022420-mRNA-1:cds;Parent=Msa1022420-mRNA-1
chr7_1 CDS 48639177 48639261 48639177 ID=Msa1022420-mRNA-1:cds;Parent=Msa1022420-mRNA-1
chr7_1 CDS 48639801 48639978 48639801 ID=Msa1022420-mRNA-1:cds;Parent=Msa1022420-mRNA-1
chr7_1 CDS 48640069 48640188 48640069 ID=Msa1022420-mRNA-1:cds;Parent=Msa1022420-mRNA-1
chr7_1 CDS 48640668 48640891 48640668 ID=Msa1022420-mRNA-1:cds;Parent=Msa1022420-mRNA-1
chr7_1 CDS 48641112 48641701 48641112 ID=Msa1022420-mRNA-1:cds;Parent=Msa1022420-mRNA-1
chr7_1 CDS 48641881 48642015 48641881 ID=Msa1022420-mRNA-1:cds;Parent=Msa1022420-mRNA-1
chr7_1 CDS 48642283 48642408 48642283 ID=Msa1022420-mRNA-1:cds;Parent=Msa1022420-mRNA-1
chr7_1 three_prime_UTR 48642409 48642706 48642409 ID=Msa1022420-mRNA-1:three_prime_utr;Parent=Msa1022420-mRNA-1
Gene Sequence

>Msa1022420

ATGATGATGAATAATGGTGAAGAAGATGAACTCTATGAACAGTTATGGAAAGCTTGTGCTGGTCCTCATGTTGAAGTTCCTCGTGCTGGACAAAGAGTTTTCTATTTTCCTCAAGGACACATGGAACAATTAGAAGTATCAACAAATCAGGAACTAAATCAGAGGATTCCATTGTTCAAACTCCCCAACAAGATCCTTTGTCGTGTTGTAAATGTTCATTTACTGGCTGAACAAGAAACAGATGAGGTTTATGCACAGATAACTCTGGTACCAGAATCTAATCAAACTGAGCCTACAAGCCTTGATCCTTGTCCTGCCGAACCTCCAAGACCAAGAACTCACTCCTTCAGCAAGGTCTTAACTAACTCTGATACAAGTACTCATGGTGGCTTTTCTGTTCTTCGGAAACATGCCACAGAATGCCTTCCATCACTGGATATGTCCCAATCTACTCCAACTCAAGAATTGGTTGCTAAGGATCTTCACAATTACGAATGGCACTTTAAGCATATATTTCGAGATGCTGTTTATAGAGGGCACAATGGAGAATTACGCGTTGGCGTGAGGCATCTTGCTTCTCCACAAAGCTGCATGCCTTCATCTGTGATTTCTGGTCAGAGCATGCACCTTGGAGTCCTTGCAACCGCGTCTCATGCTGTTGCAACTCAAACTCTTTTTGTAGTATACTACAAGCCCAGGATGAGCCAGTTCATTATAAGTGTGAATAAGTATATGGAAGCTATCAACCAAAAATTTAGTGTTGGCATGAGGTTTAAGATGAGTTTTGATGGGGATGATTCTCCTGAGACTGACAAAAGTCCACTTTGTTTCGAATTTCAAATGATGGTTAGTATTCATTATTCATCCACTCTTCTCATATATTCTCATCAGGTTCAATGGGATGACGCTGCATCGATTCCAAGACCTGATAGAATTTCACCATGGGAGATAGAACCCCTTCTGGCTTCTGCTCCTACGACTATTCAACCTCCTGCTGCAAAATATAAAAGGCCTAGGCTACCTAGTGACGTTCCAGATTTTGTAGGTGACTCTACTTACTGGGAAAATGGGCTGACACAATCCGATGTAACACAAGTTAATAATGTTATGTCTGAAAACATAAGGAATGACGGTATGCATTTGTGGCATCATAAGCAAACTGATAATAGCAGCAGCAATGGTTTATCGAGGAATCTGACTGACGGAAGTTGGCTATCTTCTCCTCATTCAAGTGGTCCTTCTCATTTGTGTCAGGGCACGACCGACGATAGCAAGAGTGTCGCAGTCTCGGCTTGGCCTATTTCAAAAACTCACTCAGAAATATTGAACAACAATGATGATTTGACTGATCAGGTTGTCAAGGAGAACAAAACGGAGGCTGCTACAAGCTGTAGATTGTTCGGGATTGATCTTAATGATCCTCGCACGAACACTCCTAAGGTGTCTGAGTATGCAGCAAATGTATTTGGAGTCACCTCTGAGGGATGCGTTGCCGCTCCCATGTCAAGAACTGATGCAGACCAAAATAAGTTTGATATCTCAAAGGCTTCAAAAGAAAGGAAACAAGAACAGCTACCGATATCTCCAAATGAAACACAAAGCAAGCAAACCAATAGCAGAAGTTGCACTAAGGTTCAAATGCAGGGTGTTGCAGTGGGTCGTGCGGTGGACTTGACTGCGTTGGATGGTTATGATCAACTTATTGATGAATTAGAGAAGCTGTTTGACATGAAGGGACAGATCCATCCTAGGAATAAATGGGAAATTGGAATTTTGCAATATGGTGAGAAGAATCTTCATTTGTTCCAGCCAAGATGTGCACAAAATGAGCTCAGGGACCAAATTACCTATCTCATCACTAGAAGAAACTGTAATAAGCTCAGACACAGCTGA
Protein sequence

>Msa1022420

MMMNNGEEDELYEQLWKACAGPHVEVPRAGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLPNKILCRVVNVHLLAEQETDEVYAQITLVPESNQTEPTSLDPCPAEPPRPRTHSFSKVLTNSDTSTHGGFSVLRKHATECLPSLDMSQSTPTQELVAKDLHNYEWHFKHIFRDAVYRGHNGELRVGVRHLASPQSCMPSSVISGQSMHLGVLATASHAVATQTLFVVYYKPRMSQFIISVNKYMEAINQKFSVGMRFKMSFDGDDSPETDKSPLCFEFQMMVSIHYSSTLLIYSHQVQWDDAASIPRPDRISPWEIEPLLASAPTTIQPPAAKYKRPRLPSDVPDFVGDSTYWENGLTQSDVTQVNNVMSENIRNDGMHLWHHKQTDNSSSNGLSRNLTDGSWLSSPHSSGPSHLCQGTTDDSKSVAVSAWPISKTHSEILNNNDDLTDQVVKENKTEAATSCRLFGIDLNDPRTNTPKVSEYAANVFGVTSEGCVAAPMSRTDADQNKFDISKASKERKQEQLPISPNETQSKQTNSRSCTKVQMQGVAVGRAVDLTALDGYDQLIDELEKLFDMKGQIHPRNKWEIGILQYGEKNLHLFQPRCAQNELRDQITYLITRRNCNKLRHS*