AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1179180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179180 MtrunA17_Chr8g0342971 90.395 531 26 3 1 506 1 531 0.0 974
Msa1179180 MtrunA17_Chr8g0342951 79.057 530 86 3 1 506 1 529 0.0 840
Msa1179180 MtrunA17_Chr8g0344211 76.604 530 99 3 1 506 1 529 0.0 827
Msa1179180 MtrunA17_Chr8g0343011 74.953 527 110 4 1 506 1 526 0.0 790
Msa1179180 MtrunA17_Chr8g0342891 71.456 522 120 4 9 506 6 522 0.0 771
Msa1179180 MtrunA17_Chr8g0342921 70.677 532 128 6 1 506 1 530 0.0 754
Msa1179180 MtrunA17_Chr2g0329911 66.290 531 146 5 1 506 1 523 0.0 714
Msa1179180 MtrunA17_Chr8g0342881 65.318 519 148 5 12 506 7 517 0.0 691
Msa1179180 MtrunA17_Chr8g0342931 78.398 412 64 3 119 506 1 411 0.0 665
Msa1179180 MtrunA17_Chr5g0406871 60.113 529 178 7 8 506 4 529 0.0 654
Msa1179180 MtrunA17_Chr2g0329901 60.837 526 177 5 5 506 5 525 0.0 649
Msa1179180 MtrunA17_Chr8g0343021 59.772 527 180 7 8 506 4 526 0.0 636
Msa1179180 MtrunA17_Chr8g0343031 59.065 535 171 8 8 506 5 527 0.0 630
Msa1179180 MtrunA17_Chr3g0120071 60.153 522 180 6 8 506 4 520 0.0 629
Msa1179180 MtrunA17_Chr8g0342901 61.228 521 142 8 9 506 6 489 0.0 617
Msa1179180 MtrunA17_Chr8g0342981 58.985 473 139 10 66 506 36 485 1.10e-180 528
Msa1179180 MtrunA17_Chr1g0191921 52.174 529 198 10 10 506 15 520 1.19e-175 516
Msa1179180 MtrunA17_Chr1g0205611 50.000 528 205 10 15 506 9 513 4.34e-168 496
Msa1179180 MtrunA17_Chr8g0342991 52.399 521 160 12 14 506 9 469 2.77e-167 493
Msa1179180 MtrunA17_Chr7g0272791 50.285 527 206 11 15 506 24 529 2.00e-165 490
Msa1179180 MtrunA17_Chr8g0343001 52.115 520 162 12 14 506 9 468 8.76e-165 486
Msa1179180 MtrunA17_Chr8g0344201 41.372 481 245 12 57 506 113 587 1.31e-102 328
Msa1179180 MtrunA17_Chr8g0338451 39.113 496 241 15 56 506 46 525 2.46e-98 316
Msa1179180 MtrunA17_Chr3g0118651 37.403 516 247 15 32 506 82 562 2.89e-95 308
Msa1179180 MtrunA17_Chr3g0118641 41.379 435 215 12 105 506 134 561 1.61e-92 301
Msa1179180 MtrunA17_Chr3g0118621 42.353 425 210 11 112 506 105 524 2.17e-92 300
Msa1179180 MtrunA17_Chr4g0033171 44.382 356 186 6 160 506 31 383 2.09e-86 281
Msa1179180 MtrunA17_Chr8g0377101 40.367 436 210 14 109 506 152 575 1.71e-84 280
Msa1179180 MtrunA17_Chr4g0047281 37.939 427 217 13 105 506 152 555 1.15e-78 264
Msa1179180 MtrunA17_Chr6g0471951 37.688 199 84 3 309 506 18 177 6.80e-33 130
Msa1179180 MtrunA17_Chr8g0344241 98.214 56 1 0 451 506 67 122 2.95e-30 123
Msa1179180 MtrunA17_Chr8g0344241 70.000 60 11 1 278 330 9 68 2.22e-17 84.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179180 AT1G55020.1 51.040 529 201 10 13 508 19 522 1.06e-173 511
Msa1179180 AT3G22400.1 47.280 533 222 10 14 508 34 545 7.97e-159 474
Msa1179180 AT1G72520.1 40.377 478 252 11 57 506 114 586 1.05e-96 313
Msa1179180 AT1G17420.1 38.004 521 269 14 14 506 85 579 2.68e-94 306
Msa1179180 AT3G45140.1 38.351 485 240 17 57 506 95 555 8.95e-91 296
Msa1179180 AT3G45140.2 40.802 424 202 15 118 506 4 413 5.37e-89 289
Msa1179180 AT1G67560.1 37.423 489 243 18 63 506 106 576 2.35e-78 263

Find 230 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCATGCAGCTGTTAATTT+TGG 0.137230 8_1:+12494904 Msa1179180:three_prime_UTR
GTATGAACAGTTTATTATTT+TGG 0.139486 8_1:-12493656 None:intergenic
CTTCAGATGGACTAGAAATA+TGG 0.251328 8_1:+12494671 Msa1179180:three_prime_UTR
CCACAGTTCCCTTCACCTTT+TGG 0.267984 8_1:-12491200 None:intergenic
TAAATGTATTACACTATCTT+TGG 0.272059 8_1:-12491132 None:intergenic
AAAGAGTCCTTTAAAAGGTT+TGG 0.276421 8_1:+12495177 Msa1179180:three_prime_UTR
TGGGTATCTAACTTGCTCTT+TGG 0.277731 8_1:-12493404 None:intergenic
CTGCAAGTGTTCTTTGGTTA+TGG 0.284936 8_1:-12493450 None:intergenic
AGCCAAAAGAGTCCTTTAAA+AGG 0.287289 8_1:+12495172 Msa1179180:three_prime_UTR
CTTCCAAGAGATGAATCATT+TGG 0.295229 8_1:+12492803 Msa1179180:CDS
TATATACCTTGAATCACTTT+TGG 0.299777 8_1:-12493073 None:intergenic
ATTCTGAACTCCAAGCATTC+TGG 0.306722 8_1:+12494764 Msa1179180:three_prime_UTR
GCTTCAACACCTTCACTTGC+AGG 0.331689 8_1:-12493861 None:intergenic
GTTTGGCTGCAAGTGTTCTT+TGG 0.338116 8_1:-12493456 None:intergenic
GTTCCTTGAACAATGGTATT+GGG 0.343293 8_1:-12493009 None:intergenic
CTTTCAGTATTGAATTTGAA+TGG 0.347490 8_1:+12491864 Msa1179180:CDS
TCTTGTCTGTAGTACACTAA+TGG 0.349954 8_1:-12492211 None:intergenic
TCAGTAAGAGTATCATTCTT+TGG 0.350791 8_1:-12495057 None:intergenic
TCACTTGGACTCTCACTCTT+AGG 0.352075 8_1:-12492770 None:intergenic
CTTCGGTGGTTTACAAGGAT+TGG 0.353950 8_1:+12494247 Msa1179180:three_prime_UTR
AAGCTGATGGTTCCATGGTT+TGG 0.356775 8_1:-12491980 None:intergenic
CACCCTCAAGGTGATAGTTT+TGG 0.371667 8_1:+12493816 Msa1179180:CDS
TTGTCCTCAAATAGGTCTTC+TGG 0.375950 8_1:-12495029 None:intergenic
AAACTTGCACCACCCTCATA+TGG 0.380599 8_1:+12494869 Msa1179180:three_prime_UTR
ACCCACTCTTTCCATATTTG+AGG 0.381779 8_1:+12493691 Msa1179180:CDS
AAGTTAGATACCCAACTCTT+TGG 0.384049 8_1:+12493413 Msa1179180:CDS
AGTTCCTTGAACAATGGTAT+TGG 0.384497 8_1:-12493010 None:intergenic
TGGTGAAAAGTCTCTTTGAT+AGG 0.385489 8_1:+12491175 Msa1179180:CDS
TGGTGTGATTGTCCTCAAAT+AGG 0.391613 8_1:-12495037 None:intergenic
GCCTGACAAGAACGCTAGTT+TGG 0.391684 8_1:+12492324 Msa1179180:CDS
TTACGATGTCTACAATGATT+TGG 0.392319 8_1:+12492297 Msa1179180:CDS
TTCGGTGGTTTACAAGGATT+GGG 0.393860 8_1:+12494248 Msa1179180:three_prime_UTR
GTGTTCTTTGGTTATGGTGC+TGG 0.394219 8_1:-12493444 None:intergenic
CATTCGTCATAGCAACAAAT+AGG 0.394550 8_1:+12494073 Msa1179180:three_prime_UTR
CAAGTTCTTTCCAGAATGCT+TGG 0.398414 8_1:-12494774 None:intergenic
AGCATTAAAGATGAGTTCAT+TGG 0.402361 8_1:+12491155 Msa1179180:exon
TAGTATTTATAGTAGTTGAT+AGG 0.403852 8_1:-12491067 None:intergenic
AGTTTGGCTCGTCCTGTTGT+TGG 0.404465 8_1:+12492340 Msa1179180:CDS
TCAGCTTTGTTTGCAACTCA+TGG 0.409641 8_1:+12491996 Msa1179180:CDS
ACTTGCAGCCAAACATGGTT+GGG 0.411160 8_1:+12493465 Msa1179180:CDS
AAATAATAAACTGTTCATAC+TGG 0.414321 8_1:+12493659 Msa1179180:CDS
CCTTGACAATACCTCTATAA+TGG 0.415825 8_1:-12495085 None:intergenic
CTTGTGGGGAAAGTATGCTT+TGG 0.416561 8_1:+12494218 Msa1179180:three_prime_UTR
GGCGCTGTCAAGTACATTAC+CGG 0.417400 8_1:-12491322 None:intergenic
TCCGCCGTTCTGTGGCTCTC+TGG 0.418784 8_1:+12491355 Msa1179180:CDS
GGAAGCAGGAGTTTATGAAT+AGG 0.420064 8_1:-12494114 None:intergenic
ACAGTGACCCCAACCATGTT+TGG 0.421224 8_1:-12493473 None:intergenic
GTCAATCCTTCCTCACTAGA+AGG 0.421532 8_1:-12495303 None:intergenic
GAAGGATAAAGCAGAGTGTA+AGG 0.425806 8_1:-12495285 None:intergenic
GAGGACCCTACTTCTTCATA+TGG 0.426565 8_1:+12494616 Msa1179180:three_prime_UTR
GGCAAGTAAACATTGCTAAC+AGG 0.427564 8_1:-12493840 None:intergenic
TGCCCAAATGATTCATCTCT+TGG 0.429332 8_1:-12492806 None:intergenic
GAGTTATAACCTTTCCTAGC+TGG 0.429507 8_1:-12492412 None:intergenic
TACGATGTCTACAATGATTT+GGG 0.430619 8_1:+12492298 Msa1179180:CDS
CAGAAGATTCATGCCTGAGC+AGG 0.431097 8_1:+12494972 Msa1179180:three_prime_UTR
GCCAAACTAGCGTTCTTGTC+AGG 0.433304 8_1:-12492325 None:intergenic
ATTACCTCCTTACCAACATT+GGG 0.436546 8_1:+12491827 Msa1179180:CDS
GAAGAACTGAAGACTTTAAG+AGG 0.437719 8_1:+12492232 Msa1179180:CDS
CAGCTTTGTTTGCAACTCAT+GGG 0.438633 8_1:+12491997 Msa1179180:CDS
TAAAAGGTTTGGAAAGAAGT+TGG 0.439686 8_1:+12495188 Msa1179180:three_prime_UTR
AAGGTGTTGAAGCTTCAATT+TGG 0.440030 8_1:+12493871 Msa1179180:CDS
TTCCATCATCTTGCAAGAAA+AGG 0.440642 8_1:-12493758 None:intergenic
GGTATTATTACCAAAGAGTT+GGG 0.448347 8_1:-12493423 None:intergenic
GTATCTAACTTGCTCTTTGG+TGG 0.450017 8_1:-12493401 None:intergenic
CCACCACCAAAAGTGATTCA+AGG 0.452144 8_1:+12493067 Msa1179180:CDS
TATTGAGTCAACTTTCTTGT+GGG 0.457686 8_1:+12494203 Msa1179180:three_prime_UTR
TTCAATTTGGCTCCTTGCCA+AGG 0.457965 8_1:+12493884 Msa1179180:CDS
TAGCCCAATACCATTGTTCA+AGG 0.457988 8_1:+12493006 Msa1179180:CDS
TGATGGAACTTTGAAGCCAT+TGG 0.459325 8_1:+12493773 Msa1179180:CDS
TTCCAAGAGATGAATCATTT+GGG 0.462088 8_1:+12492804 Msa1179180:CDS
GGTTGGGGTCACTGTAGAAC+AGG 0.466115 8_1:+12493481 Msa1179180:CDS
GTATGCTTTGGAAATGTCTT+CGG 0.467644 8_1:+12494230 Msa1179180:three_prime_UTR
ATTTACAATTACGTAAGCCT+TGG 0.468480 8_1:-12493901 None:intergenic
ATCACCAACTTGTTAGCCAT+TGG 0.470645 8_1:+12493934 Msa1179180:CDS
AATGTCTTCGGTGGTTTACA+AGG 0.470731 8_1:+12494242 Msa1179180:three_prime_UTR
CAAAATTAACAGCTGCATGA+AGG 0.474366 8_1:-12494903 None:intergenic
CTTTATCCTTCTAGTGAGGA+AGG 0.474629 8_1:+12495297 Msa1179180:three_prime_UTR
TTTATCTCCCAATGTTGGTA+AGG 0.474944 8_1:-12491834 None:intergenic
CGAAGACCATATGAAGAAGT+AGG 0.476300 8_1:-12494622 None:intergenic
GAAGCAGGAGTTTATGAATA+GGG 0.476696 8_1:-12494113 None:intergenic
TACTGACTTGACCATTATAG+AGG 0.477062 8_1:+12495074 Msa1179180:three_prime_UTR
TTGGCTCGTCCTGTTGTTGG+AGG 0.477565 8_1:+12492343 Msa1179180:CDS
ACTTTAAGAGGAGATGGAAC+TGG 0.480496 8_1:+12492244 Msa1179180:CDS
GGGCTGAAGCAATCCATATG+AGG 0.480881 8_1:-12494882 None:intergenic
CTCTAGAGGAGTGGCTGTTG+AGG 0.482746 8_1:+12494597 Msa1179180:intron
CTGATGGTGAAGCGGCCCTT+AGG 0.483521 8_1:+12493041 Msa1179180:CDS
AGCCCCGGTGGTGTAATTGA+CGG 0.484854 8_1:+12491273 Msa1179180:CDS
GTGCTAGATCCTCCAACAAC+AGG 0.487764 8_1:-12492352 None:intergenic
TTTCAGTATTGAATTTGAAT+GGG 0.487894 8_1:+12491865 Msa1179180:CDS
TGCCTTGTTCCGCCGTTCTG+TGG 0.490414 8_1:+12491347 Msa1179180:CDS
TACCTTGGAGAAAGAATTGA+AGG 0.490902 8_1:+12495126 Msa1179180:three_prime_UTR
CACTTGCAGCCAAACATGGT+TGG 0.491029 8_1:+12493464 Msa1179180:CDS
TACCTAATGATCTAATCAAA+AGG 0.492577 8_1:+12494289 Msa1179180:three_prime_UTR
TTCAGATGGACTAGAAATAT+GGG 0.494445 8_1:+12494672 Msa1179180:three_prime_UTR
AAAGAATTGAAGGTGACCTC+TGG 0.497226 8_1:+12495136 Msa1179180:three_prime_UTR
CACCTTCAATTCTTTCTCCA+AGG 0.500609 8_1:-12495128 None:intergenic
AACTGGAGAGCGTAAGGAAT+GGG 0.501583 8_1:+12492261 Msa1179180:CDS
TTATTGAGTCAACTTTCTTG+TGG 0.503707 8_1:+12494202 Msa1179180:three_prime_UTR
GTCAATGACATGGGAACTCC+AGG 0.504600 8_1:+12491887 Msa1179180:CDS
CATACCAATGGCTAACAAGT+TGG 0.505159 8_1:-12493938 None:intergenic
CTGAAGACTTTAAGAGGAGA+TGG 0.506033 8_1:+12492238 Msa1179180:CDS
TATTACCTCCTTACCAACAT+TGG 0.506824 8_1:+12491826 Msa1179180:CDS
ATTTATCTACAATGTGTGAC+AGG 0.507526 8_1:+12494025 Msa1179180:three_prime_UTR
CGGAAAAGTTCCTTGAACAA+TGG 0.511486 8_1:-12493016 None:intergenic
TGCATTAGCACGAAATGTGT+TGG 0.511711 8_1:+12494164 Msa1179180:three_prime_UTR
AGCCACAGAACGGCGGAACA+AGG 0.516399 8_1:-12491349 None:intergenic
TCTAGTCCATCTGAAGCATA+CGG 0.518479 8_1:-12494664 None:intergenic
AATGGAGCTGGTGTTTCACT+TGG 0.519813 8_1:-12492193 None:intergenic
AGCTTGTGTCTTGTAACCAT+GGG 0.519908 8_1:-12491096 None:intergenic
GACCAAAACTATCACCTTGA+GGG 0.520938 8_1:-12493818 None:intergenic
TTTGCAAGGGAGATGATTGC+TGG 0.521676 8_1:+12493220 Msa1179180:CDS
TTCCTCAAATATGGAAAGAG+TGG 0.524733 8_1:-12493693 None:intergenic
GTGTGGCCTACTTAGTTCAA+TGG 0.525154 8_1:-12493796 None:intergenic
TCTCTTTGATAGGCACCAAA+AGG 0.526101 8_1:+12491185 Msa1179180:CDS
AAAATTAACAGCTGCATGAA+GGG 0.528282 8_1:-12494902 None:intergenic
TGGTATTATTACCAAAGAGT+TGG 0.532290 8_1:-12493424 None:intergenic
AGATGGAACTGGAGAGCGTA+AGG 0.532462 8_1:+12492255 Msa1179180:CDS
AAACAAAGCTGATGGTTCCA+TGG 0.534625 8_1:-12491985 None:intergenic
ATAGGTCTTCTGGTAGTCCT+TGG 0.534730 8_1:-12495019 None:intergenic
CTTCAAGAGTCAAGCTCACA+AGG 0.535265 8_1:-12491952 None:intergenic
TTGGCAAGCTCATCATACTC+AGG 0.535452 8_1:-12495000 None:intergenic
CACCTTCCCTTACCCTCGAA+GGG 0.538349 8_1:+12492372 Msa1179180:CDS
AGAGTGTAAGGCATCTTCAC+TGG 0.540273 8_1:-12495273 None:intergenic
TTGCTTGTTCTCTAGAGGAG+TGG 0.540326 8_1:+12494588 Msa1179180:intron
TTTCCTAGCTGGTTTCCTGC+CGG 0.541247 8_1:-12492401 None:intergenic
GGGCCGCTTCACCATCAGTT+CGG 0.541561 8_1:-12493036 None:intergenic
TGTAGCATAGGCCTTTGTCT+CGG 0.542461 8_1:-12493727 None:intergenic
CTATTTGTTGCTATGACGAA+TGG 0.543162 8_1:-12494072 None:intergenic
AAACTATCACCTTGAGGGTG+TGG 0.543185 8_1:-12493813 None:intergenic
TGGCAAGCTCATCATACTCA+GGG 0.548833 8_1:-12494999 None:intergenic
CTCACTGCAGCTCAAAGCCC+CGG 0.548891 8_1:+12491258 Msa1179180:CDS
AAGGATGGTTCTTGTAGCAT+AGG 0.549398 8_1:-12493739 None:intergenic
TGCTTTGGAAATGTCTTCGG+TGG 0.549908 8_1:+12494233 Msa1179180:three_prime_UTR
TGGTCTTCGACTTCTAATAG+AGG 0.551214 8_1:+12494636 Msa1179180:three_prime_UTR
GCACCTTCCCTTACCCTCGA+AGG 0.551426 8_1:+12492371 Msa1179180:CDS
CTACTTAGTTCAATGGCCAA+TGG 0.551966 8_1:-12493789 None:intergenic
ATAACATGACGATATACGTA+GGG 0.555664 8_1:-12495433 None:intergenic
GCTTCTGATGAGCAATACCT+TGG 0.555714 8_1:+12495111 Msa1179180:three_prime_UTR
GAACTGGAGAGCGTAAGGAA+TGG 0.556779 8_1:+12492260 Msa1179180:CDS
CAATTACGTAAGCCTTGGCA+AGG 0.558608 8_1:-12493896 None:intergenic
AGGAACTGGAAAAGGCAAAG+TGG 0.560594 8_1:+12491778 Msa1179180:intron
TGTCACGATAATGTGGAAGC+AGG 0.561924 8_1:-12494128 None:intergenic
CTGTAGTACACTAATGGAGC+TGG 0.564302 8_1:-12492205 None:intergenic
ATTTGAATGGGTCAATGACA+TGG 0.564938 8_1:+12491877 Msa1179180:CDS
CAAATGATTCATCTCTTGGA+AGG 0.568278 8_1:-12492802 None:intergenic
ATTGAGTCAACTTTCTTGTG+GGG 0.569927 8_1:+12494204 Msa1179180:three_prime_UTR
TATAGTAGTTGATAGGTGCA+AGG 0.572221 8_1:-12491060 None:intergenic
GAGCTGGTGTTTCACTTGGA+AGG 0.572257 8_1:-12492189 None:intergenic
GACTACCCGTATGCTTCAGA+TGG 0.572331 8_1:+12494658 Msa1179180:three_prime_UTR
AAGCTTGTGTCTTGTAACCA+TGG 0.575793 8_1:-12491097 None:intergenic
TCCTCAAATATGGAAAGAGT+GGG 0.575970 8_1:-12493692 None:intergenic
GAACCGGCAGGAAACCAGCT+AGG 0.577160 8_1:+12492398 Msa1179180:CDS
AAACCGTCAATTACACCACC+GGG 0.577826 8_1:-12491276 None:intergenic
TGATAGGCACCAAAAGGTGA+AGG 0.578229 8_1:+12491191 Msa1179180:CDS
GATGTGCGCTCGCTCTATGA+AGG 0.579384 8_1:+12492947 Msa1179180:CDS
ATCTCCCAATGTTGGTAAGG+AGG 0.582864 8_1:-12491831 None:intergenic
AGTTCACTTAGTATTTCAGT+AGG 0.583265 8_1:-12492983 None:intergenic
AATAAATGCAACCGAGACAA+AGG 0.583456 8_1:+12493716 Msa1179180:CDS
GAGACACTGAGGAATCGTAA+TGG 0.585717 8_1:+12495249 Msa1179180:three_prime_UTR
CATTGGCCATTGAACTAAGT+AGG 0.586866 8_1:+12493790 Msa1179180:CDS
CTTGAAGATGTTCCAAACCA+TGG 0.587012 8_1:+12491968 Msa1179180:CDS
GTCGTTATCAATAAAAGATG+AGG 0.588702 8_1:+12495390 Msa1179180:three_prime_UTR
CTAGTCCATCTGAAGCATAC+GGG 0.589626 8_1:-12494663 None:intergenic
GAAGACCATATGAAGAAGTA+GGG 0.590733 8_1:-12494621 None:intergenic
ATAAACGAAATTCATACCAA+TGG 0.593016 8_1:-12493950 None:intergenic
ATCATCTTGCAAGAAAAGGA+TGG 0.594431 8_1:-12493754 None:intergenic
GGAAGGTAAACAGTGTCACT+TGG 0.595128 8_1:-12492785 None:intergenic
AGAACACTTGCAGCCAAACA+TGG 0.595358 8_1:+12493460 Msa1179180:CDS
AACAAATAGGCATCTGAGTG+TGG 0.597988 8_1:+12494086 Msa1179180:three_prime_UTR
AGAACGGCGGAACAAGGCAG+TGG 0.599351 8_1:-12491343 None:intergenic
GGAACTGGAAAAGGCAAAGT+GGG 0.599537 8_1:+12491779 Msa1179180:intron
GAACTTGTAGAGGTCGGTCA+TGG 0.600852 8_1:+12494790 Msa1179180:three_prime_UTR
TGAGTTGCAAACAAAGCTGA+TGG 0.602316 8_1:-12491993 None:intergenic
TTCATTGTGTCACGATAATG+TGG 0.604329 8_1:-12494135 None:intergenic
GTTGATGCAAAAGAATGTGT+TGG 0.605040 8_1:+12491224 Msa1179180:CDS
CTAAGTAGGCCACACCCTCA+AGG 0.605346 8_1:+12493804 Msa1179180:CDS
AGAAGATTCATGCCTGAGCA+GGG 0.609374 8_1:+12494973 Msa1179180:three_prime_UTR
GAAACCGTCAATTACACCAC+CGG 0.610680 8_1:-12491277 None:intergenic
GGCAGGAAACCAGCTAGGAA+AGG 0.610843 8_1:+12492403 Msa1179180:CDS
ACTACCAGAAGACCTATTTG+AGG 0.611884 8_1:+12495025 Msa1179180:three_prime_UTR
TATATCGAGAATTATCTGCA+AGG 0.612246 8_1:+12491917 Msa1179180:CDS
TTTCCGAACTGATGGTGAAG+CGG 0.613417 8_1:+12493033 Msa1179180:CDS
TTTGGACAATATCCGTATGG+AGG 0.613753 8_1:+12494922 Msa1179180:three_prime_UTR
TATGGGCTGCTATTAAGACA+TGG 0.613774 8_1:+12494689 Msa1179180:three_prime_UTR
GTTATCAATAAAAGATGAGG+AGG 0.619555 8_1:+12495393 Msa1179180:three_prime_UTR
GGCTGAAGCAATCCATATGA+GGG 0.621259 8_1:-12494881 None:intergenic
GAGGAAGGATTGACTTGCAG+AGG 0.621733 8_1:+12495312 Msa1179180:three_prime_UTR
TCTTCAAAAGTGTTAAACTC+AGG 0.621983 8_1:-12492926 None:intergenic
GTGCGCTCGCTCTATGAAGG+TGG 0.621984 8_1:+12492950 Msa1179180:CDS
TGGAAAGAACTTGTAGAGGT+CGG 0.622722 8_1:+12494784 Msa1179180:three_prime_UTR
CACAATATAGCAATCAAACA+TGG 0.624714 8_1:-12495505 None:intergenic
TTAACGATGTATCCTCCATA+CGG 0.627147 8_1:-12494934 None:intergenic
GCCAGAGAGCCACAGAACGG+CGG 0.628448 8_1:-12491356 None:intergenic
ATTAGTGCTACCGTTGCTGA+TGG 0.629607 8_1:+12491381 Msa1179180:CDS
TGAGTATGATGAGCTTGCCA+AGG 0.631121 8_1:+12495002 Msa1179180:three_prime_UTR
GTTTACTTGCCTGCAAGTGA+AGG 0.632524 8_1:+12493852 Msa1179180:CDS
TCTGCTTTATCCTTCTAGTG+AGG 0.633317 8_1:+12495293 Msa1179180:three_prime_UTR
GAAGTTGTTACCATCAGCAA+CGG 0.635334 8_1:-12491391 None:intergenic
ATGGGCTGCTATTAAGACAT+GGG 0.642500 8_1:+12494690 Msa1179180:three_prime_UTR
CATAACATGACGATATACGT+AGG 0.643218 8_1:-12495434 None:intergenic
CTTGCAGCCAAACATGGTTG+GGG 0.644742 8_1:+12493466 Msa1179180:CDS
GGACCAAAACTATCACCTTG+AGG 0.648019 8_1:-12493819 None:intergenic
AATGTGTTGGTTAATGCAGA+CGG 0.651002 8_1:+12494177 Msa1179180:three_prime_UTR
ACCTTCCCTTACCCTCGAAG+GGG 0.651341 8_1:+12492373 Msa1179180:CDS
TGACTGATGATGAATTTGCA+AGG 0.653058 8_1:+12493206 Msa1179180:CDS
ATAAATACTAAGCATCCCCA+TGG 0.653984 8_1:+12491080 Msa1179180:five_prime_UTR
GATAGGCACCAAAAGGTGAA+GGG 0.655391 8_1:+12491192 Msa1179180:CDS
CCATTATAGAGGTATTGTCA+AGG 0.660191 8_1:+12495085 Msa1179180:three_prime_UTR
AATATGGAAAGAGTGGGTCG+TGG 0.664035 8_1:-12493686 None:intergenic
GACTGATGATGAATTTGCAA+GGG 0.664869 8_1:+12493207 Msa1179180:CDS
CATCACAAAATGTCATACCT+CGG 0.665067 8_1:+12492870 Msa1179180:CDS
TCAGCCAGAGAGCCACAGAA+CGG 0.665261 8_1:-12491359 None:intergenic
GAGCAGTGGATCATTCTGCA+TGG 0.669101 8_1:+12493182 Msa1179180:intron
ATTCTGGAAAGAACTTGTAG+AGG 0.670411 8_1:+12494780 Msa1179180:three_prime_UTR
ACTGCAGCTCAAAGCCCCGG+TGG 0.677703 8_1:+12491261 Msa1179180:CDS
CCAAAAGGTGAAGGGAACTG+TGG 0.677832 8_1:+12491200 Msa1179180:CDS
TTTGAATGGGTCAATGACAT+GGG 0.679114 8_1:+12491878 Msa1179180:CDS
TGAAGCAATCCATATGAGGG+TGG 0.686503 8_1:-12494878 None:intergenic
GTGACTTGAAGAATGCTACA+TGG 0.691997 8_1:+12494812 Msa1179180:three_prime_UTR
GCTGTGAATCAGAAGTCCAG+AGG 0.700105 8_1:-12495152 None:intergenic
CCTTCCCTTACCCTCGAAGG+GGG 0.709915 8_1:+12492374 Msa1179180:CDS
GGCAAGCTCATCATACTCAG+GGG 0.713604 8_1:-12494998 None:intergenic
TAACATGACGATATACGTAG+GGG 0.724144 8_1:-12495432 None:intergenic
AACATGACGATATACGTAGG+GGG 0.738326 8_1:-12495431 None:intergenic
ATCGAGAATTATCTGCAAGG+CGG 0.739375 8_1:+12491920 Msa1179180:CDS
GGAACAACGATGAGACACTG+AGG 0.753810 8_1:+12495238 Msa1179180:three_prime_UTR
GTAACTATAGATCTCAACCG+AGG 0.758551 8_1:-12492887 None:intergenic
AACCGTCAATTACACCACCG+GGG 0.780189 8_1:-12491275 None:intergenic
GCTTGTGTCTTGTAACCATG+GGG 0.785521 8_1:-12491095 None:intergenic
ACTTGAAGAATGCTACATGG+TGG 0.809695 8_1:+12494815 Msa1179180:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAAAAATGTCAAAATT+TGG - chr8_1:12491759-12491778 None:intergenic 10.0%
!!! AAATTTTGACATTTTTATAT+AGG + chr8_1:12491758-12491777 Msa1179180:intron 10.0%
!! AACAATTGAAAAAATAAATT+GGG - chr8_1:12494544-12494563 None:intergenic 10.0%
!! AAACAATTGAAAAAATAAAT+TGG - chr8_1:12494545-12494564 None:intergenic 10.0%
!!! ATTATATTTTCAAGAAACTT+TGG + chr8_1:12492469-12492488 Msa1179180:intron 15.0%
!!! TAAATTTTATTTTGTGAAAC+AGG + chr8_1:12493629-12493648 Msa1179180:intron 15.0%
!! TAGTATTTATAGTAGTTGAT+AGG - chr8_1:12491070-12491089 None:intergenic 20.0%
!! TAAATGTATTACACTATCTT+TGG - chr8_1:12491135-12491154 None:intergenic 20.0%
!! TATATATATATTGTGATGTC+CGG + chr8_1:12491430-12491449 Msa1179180:intron 20.0%
!!! TTAATATTTACTCATTGACT+CGG - chr8_1:12491571-12491590 None:intergenic 20.0%
!! TTATACTAATGTCAATCTAA+TGG - chr8_1:12491665-12491684 None:intergenic 20.0%
!!! GTATAAAGAACATCAAATTT+TGG + chr8_1:12491679-12491698 Msa1179180:intron 20.0%
!!! TTTCAGTATTGAATTTGAAT+GGG + chr8_1:12491865-12491884 Msa1179180:CDS 20.0%
!! TTGGCAAAAATTAATTGATA+TGG + chr8_1:12492488-12492507 Msa1179180:intron 20.0%
!! TAATGTAATTAAATCAGTGA+TGG + chr8_1:12492626-12492645 Msa1179180:intron 20.0%
!!! ATTTTTAATTAACCACATCT+TGG + chr8_1:12493358-12493377 Msa1179180:intron 20.0%
!! TTAAATTCAAATGAATCACA+AGG + chr8_1:12493604-12493623 Msa1179180:intron 20.0%
!! TAAATTCAAATGAATCACAA+GGG + chr8_1:12493605-12493624 Msa1179180:intron 20.0%
!!! GTATGAACAGTTTATTATTT+TGG - chr8_1:12493659-12493678 None:intergenic 20.0%
!! AAATAATAAACTGTTCATAC+TGG + chr8_1:12493659-12493678 Msa1179180:CDS 20.0%
!!! AAGAGTACTATTAAGTATAT+AGG - chr8_1:12494507-12494526 None:intergenic 20.0%
!! TGAAAAAATAAATTGGGAAA+AGG - chr8_1:12494538-12494557 None:intergenic 20.0%
! ATATATATATTGTGATGTCC+GGG + chr8_1:12491431-12491450 Msa1179180:intron 25.0%
! ATATATATATGTTCGAATCC+CGG - chr8_1:12491452-12491471 None:intergenic 25.0%
!! TGACATTTTTATATAGGAAC+TGG + chr8_1:12491764-12491783 Msa1179180:intron 25.0%
!! TTTTATATAGGAACTGGAAA+AGG + chr8_1:12491770-12491789 Msa1179180:intron 25.0%
!! CTTTCAGTATTGAATTTGAA+TGG + chr8_1:12491864-12491883 Msa1179180:CDS 25.0%
! TATAGATATTCTTACCTTGT+TGG - chr8_1:12492065-12492084 None:intergenic 25.0%
! TACAAAATTGTAGTCATTGA+TGG - chr8_1:12492163-12492182 None:intergenic 25.0%
!! TATATACCTTGAATCACTTT+TGG - chr8_1:12493076-12493095 None:intergenic 25.0%
!! TTTGCATGAAATATTTTGCT+AGG - chr8_1:12493117-12493136 None:intergenic 25.0%
! AAATATATAGAGAAAGCTCA+TGG + chr8_1:12493136-12493155 Msa1179180:intron 25.0%
! AATATAAATGTACCAAGATG+TGG - chr8_1:12493373-12493392 None:intergenic 25.0%
! CATCTTGGTACATTTATATT+AGG + chr8_1:12493373-12493392 Msa1179180:intron 25.0%
!!! GCATTTATTTTCCTCAAATA+TGG - chr8_1:12493705-12493724 None:intergenic 25.0%
! ATAAACGAAATTCATACCAA+TGG - chr8_1:12493953-12493972 None:intergenic 25.0%
!!! TTTTGATTAGATCATTAGGT+AGG - chr8_1:12494290-12494309 None:intergenic 25.0%
! TACCTAATGATCTAATCAAA+AGG + chr8_1:12494289-12494308 Msa1179180:three_prime_UTR 25.0%
!!! TACCTTTTGATTAGATCATT+AGG - chr8_1:12494294-12494313 None:intergenic 25.0%
!! ATCTGATGTAATGTTTTGTA+AGG - chr8_1:12494318-12494337 None:intergenic 25.0%
AGCATTAAAGATGAGTTCAT+TGG + chr8_1:12491155-12491174 Msa1179180:exon 30.0%
AATCGTAATAGACAAAAGTG+AGG - chr8_1:12491610-12491629 None:intergenic 30.0%
!! TAATGTCAATCTAATGGACT+CGG - chr8_1:12491659-12491678 None:intergenic 30.0%
!! TTTTGTTTATCTCCCAATGT+TGG - chr8_1:12491842-12491861 None:intergenic 30.0%
TATATCGAGAATTATCTGCA+AGG + chr8_1:12491917-12491936 Msa1179180:CDS 30.0%
!! CATTGATGGTATCAAGTTTT+TGG - chr8_1:12492149-12492168 None:intergenic 30.0%
TTACGATGTCTACAATGATT+TGG + chr8_1:12492297-12492316 Msa1179180:CDS 30.0%
TACGATGTCTACAATGATTT+GGG + chr8_1:12492298-12492317 Msa1179180:CDS 30.0%
AGTCTTAGTAAACAACATCA+GGG - chr8_1:12492567-12492586 None:intergenic 30.0%
AAGTCTTAGTAAACAACATC+AGG - chr8_1:12492568-12492587 None:intergenic 30.0%
! GTTTACTAAGACTTGCTTAA+TGG + chr8_1:12492574-12492593 Msa1179180:intron 30.0%
TTCCAAGAGATGAATCATTT+GGG + chr8_1:12492804-12492823 Msa1179180:CDS 30.0%
!! TCTTCAAAAGTGTTAAACTC+AGG - chr8_1:12492929-12492948 None:intergenic 30.0%
AGTTCACTTAGTATTTCAGT+AGG - chr8_1:12492986-12493005 None:intergenic 30.0%
! TGAAATATTTTGCTAGGACT+AGG - chr8_1:12493111-12493130 None:intergenic 30.0%
AAATTTCTTACTATGAGCAG+TGG + chr8_1:12493168-12493187 Msa1179180:intron 30.0%
!!! AAGAGTTTTTTGATGATGTG+TGG - chr8_1:12493253-12493272 None:intergenic 30.0%
ACACATCATCAAAAAACTCT+TGG + chr8_1:12493252-12493271 Msa1179180:CDS 30.0%
TATAAACATGGCATGAAAAG+TGG - chr8_1:12493338-12493357 None:intergenic 30.0%
GGTATTATTACCAAAGAGTT+GGG - chr8_1:12493426-12493445 None:intergenic 30.0%
TGGTATTATTACCAAAGAGT+TGG - chr8_1:12493427-12493446 None:intergenic 30.0%
ATTTACAATTACGTAAGCCT+TGG - chr8_1:12493904-12493923 None:intergenic 30.0%
ATTTATCTACAATGTGTGAC+AGG + chr8_1:12494025-12494044 Msa1179180:three_prime_UTR 30.0%
TTATTGAGTCAACTTTCTTG+TGG + chr8_1:12494202-12494221 Msa1179180:three_prime_UTR 30.0%
TATTGAGTCAACTTTCTTGT+GGG + chr8_1:12494203-12494222 Msa1179180:three_prime_UTR 30.0%
ACATCAGATATAATACCATG+CGG + chr8_1:12494329-12494348 Msa1179180:intron 30.0%
!! GTTAGAGTTTGTTAGTATGT+AGG - chr8_1:12494422-12494441 None:intergenic 30.0%
TGGATATGAAGAAGATAGTT+AGG - chr8_1:12494452-12494471 None:intergenic 30.0%
TATATAGGATTGTCTCTGAT+GGG - chr8_1:12494492-12494511 None:intergenic 30.0%
!! TTCAGATGGACTAGAAATAT+GGG + chr8_1:12494672-12494691 Msa1179180:three_prime_UTR 30.0%
AAAATTAACAGCTGCATGAA+GGG - chr8_1:12494905-12494924 None:intergenic 30.0%
! AATTTTGGACAATATCCGTA+TGG + chr8_1:12494919-12494938 Msa1179180:three_prime_UTR 30.0%
!! ATGAATCTTCTGCTTTTAGT+TGG - chr8_1:12494964-12494983 None:intergenic 30.0%
!! TCAGTAAGAGTATCATTCTT+TGG - chr8_1:12495060-12495079 None:intergenic 30.0%
!! AACCTTTTAAAGGACTCTTT+TGG - chr8_1:12495177-12495196 None:intergenic 30.0%
! AAAGAGTCCTTTAAAAGGTT+TGG + chr8_1:12495177-12495196 Msa1179180:three_prime_UTR 30.0%
! CTTCTTTCCAAACCTTTTAA+AGG - chr8_1:12495187-12495206 None:intergenic 30.0%
TAAAAGGTTTGGAAAGAAGT+TGG + chr8_1:12495188-12495207 Msa1179180:three_prime_UTR 30.0%
TTGAGCAAAAACTCATTCAA+AGG + chr8_1:12495217-12495236 Msa1179180:three_prime_UTR 30.0%
GTCGTTATCAATAAAAGATG+AGG + chr8_1:12495390-12495409 Msa1179180:three_prime_UTR 30.0%
GTTATCAATAAAAGATGAGG+AGG + chr8_1:12495393-12495412 Msa1179180:three_prime_UTR 30.0%
ATAACATGACGATATACGTA+GGG - chr8_1:12495436-12495455 None:intergenic 30.0%
CACAATATAGCAATCAAACA+TGG - chr8_1:12495508-12495527 None:intergenic 30.0%
!! TATAGTAGTTGATAGGTGCA+AGG - chr8_1:12491063-12491082 None:intergenic 35.0%
ATAAATACTAAGCATCCCCA+TGG + chr8_1:12491080-12491099 Msa1179180:five_prime_UTR 35.0%
TGGTGAAAAGTCTCTTTGAT+AGG + chr8_1:12491175-12491194 Msa1179180:CDS 35.0%
GTTGATGCAAAAGAATGTGT+TGG + chr8_1:12491224-12491243 Msa1179180:CDS 35.0%
GTTCAACAGAATTGAGCTAT+GGG + chr8_1:12491515-12491534 Msa1179180:intron 35.0%
!! AATGTCAATCTAATGGACTC+GGG - chr8_1:12491658-12491677 None:intergenic 35.0%
TATTACCTCCTTACCAACAT+TGG + chr8_1:12491826-12491845 Msa1179180:CDS 35.0%
ATTACCTCCTTACCAACATT+GGG + chr8_1:12491827-12491846 Msa1179180:CDS 35.0%
TTTATCTCCCAATGTTGGTA+AGG - chr8_1:12491837-12491856 None:intergenic 35.0%
ATTTGAATGGGTCAATGACA+TGG + chr8_1:12491877-12491896 Msa1179180:CDS 35.0%
TTTGAATGGGTCAATGACAT+GGG + chr8_1:12491878-12491897 Msa1179180:CDS 35.0%
TTCTCGATATAAAAAGCTCC+TGG - chr8_1:12491908-12491927 None:intergenic 35.0%
TCTTGTCTGTAGTACACTAA+TGG - chr8_1:12492214-12492233 None:intergenic 35.0%
GAAGAACTGAAGACTTTAAG+AGG + chr8_1:12492232-12492251 Msa1179180:CDS 35.0%
!!! CAGTGATGGATGACTAATTT+TGG + chr8_1:12492640-12492659 Msa1179180:intron 35.0%
! GCTTGTGATTCTAAAGAGTT+TGG + chr8_1:12492703-12492722 Msa1179180:intron 35.0%
CAAATGATTCATCTCTTGGA+AGG - chr8_1:12492805-12492824 None:intergenic 35.0%
CTTCCAAGAGATGAATCATT+TGG + chr8_1:12492803-12492822 Msa1179180:CDS 35.0%
CATCACAAAATGTCATACCT+CGG + chr8_1:12492870-12492889 Msa1179180:CDS 35.0%
GTTCCTTGAACAATGGTATT+GGG - chr8_1:12493012-12493031 None:intergenic 35.0%
AGTTCCTTGAACAATGGTAT+TGG - chr8_1:12493013-12493032 None:intergenic 35.0%
!! ATACCTTGAATCACTTTTGG+TGG - chr8_1:12493073-12493092 None:intergenic 35.0%
! TGACTGATGATGAATTTGCA+AGG + chr8_1:12493206-12493225 Msa1179180:CDS 35.0%
! GACTGATGATGAATTTGCAA+GGG + chr8_1:12493207-12493226 Msa1179180:CDS 35.0%
AAGTTAGATACCCAACTCTT+TGG + chr8_1:12493413-12493432 Msa1179180:CDS 35.0%
TCCTCAAATATGGAAAGAGT+GGG - chr8_1:12493695-12493714 None:intergenic 35.0%
TTCCTCAAATATGGAAAGAG+TGG - chr8_1:12493696-12493715 None:intergenic 35.0%
AATAAATGCAACCGAGACAA+AGG + chr8_1:12493716-12493735 Msa1179180:CDS 35.0%
ATCATCTTGCAAGAAAAGGA+TGG - chr8_1:12493757-12493776 None:intergenic 35.0%
! ATCCTTTTCTTGCAAGATGA+TGG + chr8_1:12493756-12493775 Msa1179180:CDS 35.0%
TTCCATCATCTTGCAAGAAA+AGG - chr8_1:12493761-12493780 None:intergenic 35.0%
!! AAGGTGTTGAAGCTTCAATT+TGG + chr8_1:12493871-12493890 Msa1179180:CDS 35.0%
! CTATTTGTTGCTATGACGAA+TGG - chr8_1:12494075-12494094 None:intergenic 35.0%
CATTCGTCATAGCAACAAAT+AGG + chr8_1:12494073-12494092 Msa1179180:three_prime_UTR 35.0%
GAAGCAGGAGTTTATGAATA+GGG - chr8_1:12494116-12494135 None:intergenic 35.0%
TTCATTGTGTCACGATAATG+TGG - chr8_1:12494138-12494157 None:intergenic 35.0%
!! AATGTGTTGGTTAATGCAGA+CGG + chr8_1:12494177-12494196 Msa1179180:three_prime_UTR 35.0%
ATTGAGTCAACTTTCTTGTG+GGG + chr8_1:12494204-12494223 Msa1179180:three_prime_UTR 35.0%
!! GTATGCTTTGGAAATGTCTT+CGG + chr8_1:12494230-12494249 Msa1179180:three_prime_UTR 35.0%
GGGATTAGAACTATGTCTTA+TGG - chr8_1:12494472-12494491 None:intergenic 35.0%
GTATATAGGATTGTCTCTGA+TGG - chr8_1:12494493-12494512 None:intergenic 35.0%
GAAGACCATATGAAGAAGTA+GGG - chr8_1:12494624-12494643 None:intergenic 35.0%
!! CTTCAGATGGACTAGAAATA+TGG + chr8_1:12494671-12494690 Msa1179180:three_prime_UTR 35.0%
! ATTCTGGAAAGAACTTGTAG+AGG + chr8_1:12494780-12494799 Msa1179180:three_prime_UTR 35.0%
CAAAATTAACAGCTGCATGA+AGG - chr8_1:12494906-12494925 None:intergenic 35.0%
! CTTCATGCAGCTGTTAATTT+TGG + chr8_1:12494904-12494923 Msa1179180:three_prime_UTR 35.0%
TTAACGATGTATCCTCCATA+CGG - chr8_1:12494937-12494956 None:intergenic 35.0%
!! ATCTTCTGCTTTTAGTTGGT+CGG - chr8_1:12494960-12494979 None:intergenic 35.0%
!! TACTGACTTGACCATTATAG+AGG + chr8_1:12495074-12495093 Msa1179180:three_prime_UTR 35.0%
CCTTGACAATACCTCTATAA+TGG - chr8_1:12495088-12495107 None:intergenic 35.0%
!! CCATTATAGAGGTATTGTCA+AGG + chr8_1:12495085-12495104 Msa1179180:three_prime_UTR 35.0%
TACCTTGGAGAAAGAATTGA+AGG + chr8_1:12495126-12495145 Msa1179180:three_prime_UTR 35.0%
AGCCAAAAGAGTCCTTTAAA+AGG + chr8_1:12495172-12495191 Msa1179180:three_prime_UTR 35.0%
! TTTTAGATGGAGACACTGTT+GGG - chr8_1:12495342-12495361 None:intergenic 35.0%
! TTTTTAGATGGAGACACTGT+TGG - chr8_1:12495343-12495362 None:intergenic 35.0%
TAACATGACGATATACGTAG+GGG - chr8_1:12495435-12495454 None:intergenic 35.0%
CATAACATGACGATATACGT+AGG - chr8_1:12495437-12495456 None:intergenic 35.0%
AGCTTGTGTCTTGTAACCAT+GGG - chr8_1:12491099-12491118 None:intergenic 40.0%
AAGCTTGTGTCTTGTAACCA+TGG - chr8_1:12491100-12491119 None:intergenic 40.0%
TCTCTTTGATAGGCACCAAA+AGG + chr8_1:12491185-12491204 Msa1179180:CDS 40.0%
GAAGTTGTTACCATCAGCAA+CGG - chr8_1:12491394-12491413 None:intergenic 40.0%
CGTTCAACAGAATTGAGCTA+TGG + chr8_1:12491514-12491533 Msa1179180:intron 40.0%
! GCTATGGGTTAAAGAGTTGA+AGG + chr8_1:12491530-12491549 Msa1179180:intron 40.0%
GGGTTAAAGAGTTGAAGGTT+TGG + chr8_1:12491535-12491554 Msa1179180:intron 40.0%
ATCGAGAATTATCTGCAAGG+CGG + chr8_1:12491920-12491939 Msa1179180:CDS 40.0%
CTTGAAGATGTTCCAAACCA+TGG + chr8_1:12491968-12491987 Msa1179180:CDS 40.0%
AAACAAAGCTGATGGTTCCA+TGG - chr8_1:12491988-12492007 None:intergenic 40.0%
TGAGTTGCAAACAAAGCTGA+TGG - chr8_1:12491996-12492015 None:intergenic 40.0%
!! TCAGCTTTGTTTGCAACTCA+TGG + chr8_1:12491996-12492015 Msa1179180:CDS 40.0%
!! CAGCTTTGTTTGCAACTCAT+GGG + chr8_1:12491997-12492016 Msa1179180:CDS 40.0%
! ACGCATTTTCTTTGCCAACA+AGG + chr8_1:12492048-12492067 Msa1179180:intron 40.0%
! CTGAAGACTTTAAGAGGAGA+TGG + chr8_1:12492238-12492257 Msa1179180:CDS 40.0%
! ACTTTAAGAGGAGATGGAAC+TGG + chr8_1:12492244-12492263 Msa1179180:CDS 40.0%
GAGTTATAACCTTTCCTAGC+TGG - chr8_1:12492415-12492434 None:intergenic 40.0%
TGCCCAAATGATTCATCTCT+TGG - chr8_1:12492809-12492828 None:intergenic 40.0%
GTAACTATAGATCTCAACCG+AGG - chr8_1:12492890-12492909 None:intergenic 40.0%
TAGCCCAATACCATTGTTCA+AGG + chr8_1:12493006-12493025 Msa1179180:CDS 40.0%
CGGAAAAGTTCCTTGAACAA+TGG - chr8_1:12493019-12493038 None:intergenic 40.0%
! AAGGAACTTTTCCGAACTGA+TGG + chr8_1:12493025-12493044 Msa1179180:CDS 40.0%
!!! TTTTGGTGGTGGAAACCTAA+GGG - chr8_1:12493059-12493078 None:intergenic 40.0%
!! GTATCTAACTTGCTCTTTGG+TGG - chr8_1:12493404-12493423 None:intergenic 40.0%
!! TGGGTATCTAACTTGCTCTT+TGG - chr8_1:12493407-12493426 None:intergenic 40.0%
CTGCAAGTGTTCTTTGGTTA+TGG - chr8_1:12493453-12493472 None:intergenic 40.0%
ACCCACTCTTTCCATATTTG+AGG + chr8_1:12493691-12493710 Msa1179180:CDS 40.0%
AAGGATGGTTCTTGTAGCAT+AGG - chr8_1:12493742-12493761 None:intergenic 40.0%
!! TGATGGAACTTTGAAGCCAT+TGG + chr8_1:12493773-12493792 Msa1179180:CDS 40.0%
CTACTTAGTTCAATGGCCAA+TGG - chr8_1:12493792-12493811 None:intergenic 40.0%
CATTGGCCATTGAACTAAGT+AGG + chr8_1:12493790-12493809 Msa1179180:CDS 40.0%
GACCAAAACTATCACCTTGA+GGG - chr8_1:12493821-12493840 None:intergenic 40.0%
GGCAAGTAAACATTGCTAAC+AGG - chr8_1:12493843-12493862 None:intergenic 40.0%
!! ATCACCAACTTGTTAGCCAT+TGG + chr8_1:12493934-12493953 Msa1179180:CDS 40.0%
CATACCAATGGCTAACAAGT+TGG - chr8_1:12493941-12493960 None:intergenic 40.0%
AACAAATAGGCATCTGAGTG+TGG + chr8_1:12494086-12494105 Msa1179180:three_prime_UTR 40.0%
GGAAGCAGGAGTTTATGAAT+AGG - chr8_1:12494117-12494136 None:intergenic 40.0%
TGCATTAGCACGAAATGTGT+TGG + chr8_1:12494164-12494183 Msa1179180:three_prime_UTR 40.0%
AATGTCTTCGGTGGTTTACA+AGG + chr8_1:12494242-12494261 Msa1179180:three_prime_UTR 40.0%
TTCGGTGGTTTACAAGGATT+GGG + chr8_1:12494248-12494267 Msa1179180:three_prime_UTR 40.0%
TTCGCTACTCGCTCTATATA+TGG - chr8_1:12494388-12494407 None:intergenic 40.0%
TTCCTTTGCTTGTTCTCTAG+AGG + chr8_1:12494583-12494602 Msa1179180:intron 40.0%
CGAAGACCATATGAAGAAGT+AGG - chr8_1:12494625-12494644 None:intergenic 40.0%
TGGTCTTCGACTTCTAATAG+AGG + chr8_1:12494636-12494655 Msa1179180:three_prime_UTR 40.0%
! TCTAGTCCATCTGAAGCATA+CGG - chr8_1:12494667-12494686 None:intergenic 40.0%
! TATGGGCTGCTATTAAGACA+TGG + chr8_1:12494689-12494708 Msa1179180:three_prime_UTR 40.0%
! ATGGGCTGCTATTAAGACAT+GGG + chr8_1:12494690-12494709 Msa1179180:three_prime_UTR 40.0%
ATTCTGAACTCCAAGCATTC+TGG + chr8_1:12494764-12494783 Msa1179180:three_prime_UTR 40.0%
CAAGTTCTTTCCAGAATGCT+TGG - chr8_1:12494777-12494796 None:intergenic 40.0%
TGGAAAGAACTTGTAGAGGT+CGG + chr8_1:12494784-12494803 Msa1179180:three_prime_UTR 40.0%
GTGACTTGAAGAATGCTACA+TGG + chr8_1:12494812-12494831 Msa1179180:three_prime_UTR 40.0%
ACTTGAAGAATGCTACATGG+TGG + chr8_1:12494815-12494834 Msa1179180:three_prime_UTR 40.0%
TTTGGACAATATCCGTATGG+AGG + chr8_1:12494922-12494941 Msa1179180:three_prime_UTR 40.0%
ACTACCAGAAGACCTATTTG+AGG + chr8_1:12495025-12495044 Msa1179180:three_prime_UTR 40.0%
TTGTCCTCAAATAGGTCTTC+TGG - chr8_1:12495032-12495051 None:intergenic 40.0%
TGGTGTGATTGTCCTCAAAT+AGG - chr8_1:12495040-12495059 None:intergenic 40.0%
CACCTTCAATTCTTTCTCCA+AGG - chr8_1:12495131-12495150 None:intergenic 40.0%
AAAGAATTGAAGGTGACCTC+TGG + chr8_1:12495136-12495155 Msa1179180:three_prime_UTR 40.0%
GAAGGATAAAGCAGAGTGTA+AGG - chr8_1:12495288-12495307 None:intergenic 40.0%
TCTGCTTTATCCTTCTAGTG+AGG + chr8_1:12495293-12495312 Msa1179180:three_prime_UTR 40.0%
CTTTATCCTTCTAGTGAGGA+AGG + chr8_1:12495297-12495316 Msa1179180:three_prime_UTR 40.0%
! CCACGACGATTCTTTTTAGA+TGG - chr8_1:12495355-12495374 None:intergenic 40.0%
CCATCTAAAAAGAATCGTCG+TGG + chr8_1:12495352-12495371 Msa1179180:three_prime_UTR 40.0%
AACATGACGATATACGTAGG+GGG - chr8_1:12495434-12495453 None:intergenic 40.0%
GCTTGTGTCTTGTAACCATG+GGG - chr8_1:12491098-12491117 None:intergenic 45.0%
TGATAGGCACCAAAAGGTGA+AGG + chr8_1:12491191-12491210 Msa1179180:CDS 45.0%
GATAGGCACCAAAAGGTGAA+GGG + chr8_1:12491192-12491211 Msa1179180:CDS 45.0%
AAACCGTCAATTACACCACC+GGG - chr8_1:12491279-12491298 None:intergenic 45.0%
GAAACCGTCAATTACACCAC+CGG - chr8_1:12491280-12491299 None:intergenic 45.0%
! GACGGTTTCTTCGATTTTGC+TGG + chr8_1:12491291-12491310 Msa1179180:CDS 45.0%
!! GATTTTGCTGGTGATGTTGC+CGG + chr8_1:12491303-12491322 Msa1179180:CDS 45.0%
ATTAGTGCTACCGTTGCTGA+TGG + chr8_1:12491381-12491400 Msa1179180:CDS 45.0%
TCACACACACTAGCATGCAA+TGG + chr8_1:12491480-12491499 Msa1179180:intron 45.0%
CACACACACTAGCATGCAAT+GGG + chr8_1:12491481-12491500 Msa1179180:intron 45.0%
AGGAACTGGAAAAGGCAAAG+TGG + chr8_1:12491778-12491797 Msa1179180:intron 45.0%
GGAACTGGAAAAGGCAAAGT+GGG + chr8_1:12491779-12491798 Msa1179180:intron 45.0%
! ATCTCCCAATGTTGGTAAGG+AGG - chr8_1:12491834-12491853 None:intergenic 45.0%
CTTCAAGAGTCAAGCTCACA+AGG - chr8_1:12491955-12491974 None:intergenic 45.0%
AAGCTGATGGTTCCATGGTT+TGG - chr8_1:12491983-12492002 None:intergenic 45.0%
AATGGAGCTGGTGTTTCACT+TGG - chr8_1:12492196-12492215 None:intergenic 45.0%
CTGTAGTACACTAATGGAGC+TGG - chr8_1:12492208-12492227 None:intergenic 45.0%
! AACTGGAGAGCGTAAGGAAT+GGG + chr8_1:12492261-12492280 Msa1179180:CDS 45.0%
TCACTTGGACTCTCACTCTT+AGG - chr8_1:12492773-12492792 None:intergenic 45.0%
! GGAAGGTAAACAGTGTCACT+TGG - chr8_1:12492788-12492807 None:intergenic 45.0%
! TTTCCGAACTGATGGTGAAG+CGG + chr8_1:12493033-12493052 Msa1179180:CDS 45.0%
!!! CTTTTGGTGGTGGAAACCTA+AGG - chr8_1:12493060-12493079 None:intergenic 45.0%
!! CCTTGAATCACTTTTGGTGG+TGG - chr8_1:12493070-12493089 None:intergenic 45.0%
CCACCACCAAAAGTGATTCA+AGG + chr8_1:12493067-12493086 Msa1179180:CDS 45.0%
TTTGCAAGGGAGATGATTGC+TGG + chr8_1:12493220-12493239 Msa1179180:CDS 45.0%
GTGTTCTTTGGTTATGGTGC+TGG - chr8_1:12493447-12493466 None:intergenic 45.0%
GTTTGGCTGCAAGTGTTCTT+TGG - chr8_1:12493459-12493478 None:intergenic 45.0%
AGAACACTTGCAGCCAAACA+TGG + chr8_1:12493460-12493479 Msa1179180:CDS 45.0%
ACTTGCAGCCAAACATGGTT+GGG + chr8_1:12493465-12493484 Msa1179180:CDS 45.0%
AATATGGAAAGAGTGGGTCG+TGG - chr8_1:12493689-12493708 None:intergenic 45.0%
TGTAGCATAGGCCTTTGTCT+CGG - chr8_1:12493730-12493749 None:intergenic 45.0%
GTGTGGCCTACTTAGTTCAA+TGG - chr8_1:12493799-12493818 None:intergenic 45.0%
AAACTATCACCTTGAGGGTG+TGG - chr8_1:12493816-12493835 None:intergenic 45.0%
! CACCCTCAAGGTGATAGTTT+TGG + chr8_1:12493816-12493835 Msa1179180:CDS 45.0%
GGACCAAAACTATCACCTTG+AGG - chr8_1:12493822-12493841 None:intergenic 45.0%
GTTTACTTGCCTGCAAGTGA+AGG + chr8_1:12493852-12493871 Msa1179180:CDS 45.0%
! TTCAATTTGGCTCCTTGCCA+AGG + chr8_1:12493884-12493903 Msa1179180:CDS 45.0%
CAATTACGTAAGCCTTGGCA+AGG - chr8_1:12493899-12493918 None:intergenic 45.0%
TGTCACGATAATGTGGAAGC+AGG - chr8_1:12494131-12494150 None:intergenic 45.0%
! CTTGTGGGGAAAGTATGCTT+TGG + chr8_1:12494218-12494237 Msa1179180:three_prime_UTR 45.0%
!! TGCTTTGGAAATGTCTTCGG+TGG + chr8_1:12494233-12494252 Msa1179180:three_prime_UTR 45.0%
CTTCGGTGGTTTACAAGGAT+TGG + chr8_1:12494247-12494266 Msa1179180:three_prime_UTR 45.0%
! GATTGGGTTTTCACTGAGCA+AGG + chr8_1:12494264-12494283 Msa1179180:three_prime_UTR 45.0%
! CTCCTCTAGAGAACAAGCAA+AGG - chr8_1:12494588-12494607 None:intergenic 45.0%
! TTGCTTGTTCTCTAGAGGAG+TGG + chr8_1:12494588-12494607 Msa1179180:intron 45.0%
GAGGACCCTACTTCTTCATA+TGG + chr8_1:12494616-12494635 Msa1179180:three_prime_UTR 45.0%
! CTAGTCCATCTGAAGCATAC+GGG - chr8_1:12494666-12494685 None:intergenic 45.0%
AAACTTGCACCACCCTCATA+TGG + chr8_1:12494869-12494888 Msa1179180:three_prime_UTR 45.0%
TGAAGCAATCCATATGAGGG+TGG - chr8_1:12494881-12494900 None:intergenic 45.0%
GGCTGAAGCAATCCATATGA+GGG - chr8_1:12494884-12494903 None:intergenic 45.0%
AGAAGATTCATGCCTGAGCA+GGG + chr8_1:12494973-12494992 Msa1179180:three_prime_UTR 45.0%
TGGCAAGCTCATCATACTCA+GGG - chr8_1:12495002-12495021 None:intergenic 45.0%
TTGGCAAGCTCATCATACTC+AGG - chr8_1:12495003-12495022 None:intergenic 45.0%
TGAGTATGATGAGCTTGCCA+AGG + chr8_1:12495002-12495021 Msa1179180:three_prime_UTR 45.0%
ATAGGTCTTCTGGTAGTCCT+TGG - chr8_1:12495022-12495041 None:intergenic 45.0%
GCTTCTGATGAGCAATACCT+TGG + chr8_1:12495111-12495130 Msa1179180:three_prime_UTR 45.0%
GAGACACTGAGGAATCGTAA+TGG + chr8_1:12495249-12495268 Msa1179180:three_prime_UTR 45.0%
! AGAGTGTAAGGCATCTTCAC+TGG - chr8_1:12495276-12495295 None:intergenic 45.0%
GTCAATCCTTCCTCACTAGA+AGG - chr8_1:12495306-12495325 None:intergenic 45.0%
!! TTAATTAAAAATTATAAACA+TGG - chr8_1:12493350-12493369 None:intergenic 5.0%
! CCACAGTTCCCTTCACCTTT+TGG - chr8_1:12491203-12491222 None:intergenic 50.0%
CCAAAAGGTGAAGGGAACTG+TGG + chr8_1:12491200-12491219 Msa1179180:CDS 50.0%
AACCGTCAATTACACCACCG+GGG - chr8_1:12491278-12491297 None:intergenic 50.0%
GGCGCTGTCAAGTACATTAC+CGG - chr8_1:12491325-12491344 None:intergenic 50.0%
ACACACTAGCATGCAATGGG+CGG + chr8_1:12491484-12491503 Msa1179180:intron 50.0%
GTCAATGACATGGGAACTCC+AGG + chr8_1:12491887-12491906 Msa1179180:CDS 50.0%
GAGCTGGTGTTTCACTTGGA+AGG - chr8_1:12492192-12492211 None:intergenic 50.0%
! AGATGGAACTGGAGAGCGTA+AGG + chr8_1:12492255-12492274 Msa1179180:CDS 50.0%
! GAACTGGAGAGCGTAAGGAA+TGG + chr8_1:12492260-12492279 Msa1179180:CDS 50.0%
GCCTGACAAGAACGCTAGTT+TGG + chr8_1:12492324-12492343 Msa1179180:CDS 50.0%
GCCAAACTAGCGTTCTTGTC+AGG - chr8_1:12492328-12492347 None:intergenic 50.0%
! AGTTTGGCTCGTCCTGTTGT+TGG + chr8_1:12492340-12492359 Msa1179180:CDS 50.0%
GTGCTAGATCCTCCAACAAC+AGG - chr8_1:12492355-12492374 None:intergenic 50.0%
! TTTCCTAGCTGGTTTCCTGC+CGG - chr8_1:12492404-12492423 None:intergenic 50.0%
GAGCAGTGGATCATTCTGCA+TGG + chr8_1:12493182-12493201 Msa1179180:intron 50.0%
CACTTGCAGCCAAACATGGT+TGG + chr8_1:12493464-12493483 Msa1179180:CDS 50.0%
CTTGCAGCCAAACATGGTTG+GGG + chr8_1:12493466-12493485 Msa1179180:CDS 50.0%
ACAGTGACCCCAACCATGTT+TGG - chr8_1:12493476-12493495 None:intergenic 50.0%
GCTTCAACACCTTCACTTGC+AGG - chr8_1:12493864-12493883 None:intergenic 50.0%
ACCATGCGGTCTCAGTTCAA+TGG + chr8_1:12494343-12494362 Msa1179180:intron 50.0%
ACCATTGAACTGAGACCGCA+TGG - chr8_1:12494347-12494366 None:intergenic 50.0%
GACTACCCGTATGCTTCAGA+TGG + chr8_1:12494658-12494677 Msa1179180:three_prime_UTR 50.0%
GAACTTGTAGAGGTCGGTCA+TGG + chr8_1:12494790-12494809 Msa1179180:three_prime_UTR 50.0%
GGGCTGAAGCAATCCATATG+AGG - chr8_1:12494885-12494904 None:intergenic 50.0%
CAGAAGATTCATGCCTGAGC+AGG + chr8_1:12494972-12494991 Msa1179180:three_prime_UTR 50.0%
GGCAAGCTCATCATACTCAG+GGG - chr8_1:12495001-12495020 None:intergenic 50.0%
GCTGTGAATCAGAAGTCCAG+AGG - chr8_1:12495155-12495174 None:intergenic 50.0%
GGAACAACGATGAGACACTG+AGG + chr8_1:12495238-12495257 Msa1179180:three_prime_UTR 50.0%
!! GAGGAAGGATTGACTTGCAG+AGG + chr8_1:12495312-12495331 Msa1179180:three_prime_UTR 50.0%
TACGTAGGGGGTGAGGTAAT+TGG - chr8_1:12495422-12495441 None:intergenic 50.0%
AGCCCCGGTGGTGTAATTGA+CGG + chr8_1:12491273-12491292 Msa1179180:CDS 55.0%
TCAGCCAGAGAGCCACAGAA+CGG - chr8_1:12491362-12491381 None:intergenic 55.0%
CACACTAGCATGCAATGGGC+GGG + chr8_1:12491485-12491504 Msa1179180:intron 55.0%
! TAGCATGCAATGGGCGGGTT+GGG + chr8_1:12491490-12491509 Msa1179180:intron 55.0%
! TTGGCTCGTCCTGTTGTTGG+AGG + chr8_1:12492343-12492362 Msa1179180:CDS 55.0%
CACCTTCCCTTACCCTCGAA+GGG + chr8_1:12492372-12492391 Msa1179180:CDS 55.0%
ACCTTCCCTTACCCTCGAAG+GGG + chr8_1:12492373-12492392 Msa1179180:CDS 55.0%
TTCTCCCCCTTCGAGGGTAA+GGG - chr8_1:12492381-12492400 None:intergenic 55.0%
GGCAGGAAACCAGCTAGGAA+AGG + chr8_1:12492403-12492422 Msa1179180:CDS 55.0%
GATGTGCGCTCGCTCTATGA+AGG + chr8_1:12492947-12492966 Msa1179180:CDS 55.0%
GGTTGGGGTCACTGTAGAAC+AGG + chr8_1:12493481-12493500 Msa1179180:CDS 55.0%
CTAAGTAGGCCACACCCTCA+AGG + chr8_1:12493804-12493823 Msa1179180:CDS 55.0%
! CTCTAGAGGAGTGGCTGTTG+AGG + chr8_1:12494597-12494616 Msa1179180:intron 55.0%
GACGATATACGTAGGGGGTG+AGG - chr8_1:12495429-12495448 None:intergenic 55.0%
CTCACTGCAGCTCAAAGCCC+CGG + chr8_1:12491258-12491277 Msa1179180:CDS 60.0%
AGAACGGCGGAACAAGGCAG+TGG - chr8_1:12491346-12491365 None:intergenic 60.0%
! TGCCTTGTTCCGCCGTTCTG+TGG + chr8_1:12491347-12491366 Msa1179180:CDS 60.0%
AGCCACAGAACGGCGGAACA+AGG - chr8_1:12491352-12491371 None:intergenic 60.0%
CTAGCATGCAATGGGCGGGT+TGG + chr8_1:12491489-12491508 Msa1179180:intron 60.0%
GCACCTTCCCTTACCCTCGA+AGG + chr8_1:12492371-12492390 Msa1179180:CDS 60.0%
CCTTCCCTTACCCTCGAAGG+GGG + chr8_1:12492374-12492393 Msa1179180:CDS 60.0%
GTTCTCCCCCTTCGAGGGTA+AGG - chr8_1:12492382-12492401 None:intergenic 60.0%
TACCCTCGAAGGGGGAGAAC+CGG + chr8_1:12492382-12492401 Msa1179180:CDS 60.0%
GAACCGGCAGGAAACCAGCT+AGG + chr8_1:12492398-12492417 Msa1179180:CDS 60.0%
GTGCGCTCGCTCTATGAAGG+TGG + chr8_1:12492950-12492969 Msa1179180:CDS 60.0%
GGGCCGCTTCACCATCAGTT+CGG - chr8_1:12493039-12493058 None:intergenic 60.0%
! CTGATGGTGAAGCGGCCCTT+AGG + chr8_1:12493041-12493060 Msa1179180:CDS 60.0%
TACTCAGGGGATCCCTGCTC+AGG - chr8_1:12494988-12495007 None:intergenic 60.0%
ACTGCAGCTCAAAGCCCCGG+TGG + chr8_1:12491261-12491280 Msa1179180:CDS 65.0%
TCCGCCGTTCTGTGGCTCTC+TGG + chr8_1:12491355-12491374 Msa1179180:CDS 65.0%
GCCAGAGAGCCACAGAACGG+CGG - chr8_1:12491359-12491378 None:intergenic 65.0%
CCCCCTTCGAGGGTAAGGGA+AGG - chr8_1:12492377-12492396 None:intergenic 65.0%
!! TGCCGGTTCTCCCCCTTCGA+GGG - chr8_1:12492387-12492406 None:intergenic 65.0%
!! CTGCCGGTTCTCCCCCTTCG+AGG - chr8_1:12492388-12492407 None:intergenic 70.0%
CTCGAAGGGGGAGAACCGGC+AGG + chr8_1:12492386-12492405 Msa1179180:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 12491016 12495533 12491016 ID=Msa1179180;Name=Msa1179180
chr8_1 mRNA 12491016 12495533 12491016 ID=Msa1179180-mRNA-1;Parent=Msa1179180;Name=Msa1179180-mRNA-1;_AED=0.38;_eAED=0.38;_QI=149|0.75|0.66|1|1|0.88|9|1267|511
chr8_1 exon 12491016 12491402 12491016 ID=Msa1179180-mRNA-1:exon:4484;Parent=Msa1179180-mRNA-1
chr8_1 exon 12491780 12492018 12491780 ID=Msa1179180-mRNA-1:exon:4485;Parent=Msa1179180-mRNA-1
chr8_1 exon 12492184 12492424 12492184 ID=Msa1179180-mRNA-1:exon:4486;Parent=Msa1179180-mRNA-1
chr8_1 exon 12492768 12492904 12492768 ID=Msa1179180-mRNA-1:exon:4487;Parent=Msa1179180-mRNA-1
chr8_1 exon 12492926 12493088 12492926 ID=Msa1179180-mRNA-1:exon:4488;Parent=Msa1179180-mRNA-1
chr8_1 exon 12493188 12493273 12493188 ID=Msa1179180-mRNA-1:exon:4489;Parent=Msa1179180-mRNA-1
chr8_1 exon 12493395 12493502 12493395 ID=Msa1179180-mRNA-1:exon:4490;Parent=Msa1179180-mRNA-1
chr8_1 exon 12493651 12494310 12493651 ID=Msa1179180-mRNA-1:exon:4491;Parent=Msa1179180-mRNA-1
chr8_1 exon 12494603 12495533 12494603 ID=Msa1179180-mRNA-1:exon:4492;Parent=Msa1179180-mRNA-1
chr8_1 five_prime_UTR 12491016 12491164 12491016 ID=Msa1179180-mRNA-1:five_prime_utr;Parent=Msa1179180-mRNA-1
chr8_1 CDS 12491165 12491402 12491165 ID=Msa1179180-mRNA-1:cds;Parent=Msa1179180-mRNA-1
chr8_1 CDS 12491780 12492018 12491780 ID=Msa1179180-mRNA-1:cds;Parent=Msa1179180-mRNA-1
chr8_1 CDS 12492184 12492424 12492184 ID=Msa1179180-mRNA-1:cds;Parent=Msa1179180-mRNA-1
chr8_1 CDS 12492768 12492904 12492768 ID=Msa1179180-mRNA-1:cds;Parent=Msa1179180-mRNA-1
chr8_1 CDS 12492926 12493088 12492926 ID=Msa1179180-mRNA-1:cds;Parent=Msa1179180-mRNA-1
chr8_1 CDS 12493188 12493273 12493188 ID=Msa1179180-mRNA-1:cds;Parent=Msa1179180-mRNA-1
chr8_1 CDS 12493395 12493502 12493395 ID=Msa1179180-mRNA-1:cds;Parent=Msa1179180-mRNA-1
chr8_1 CDS 12493651 12493974 12493651 ID=Msa1179180-mRNA-1:cds;Parent=Msa1179180-mRNA-1
chr8_1 three_prime_UTR 12493975 12494310 12493975 ID=Msa1179180-mRNA-1:three_prime_utr;Parent=Msa1179180-mRNA-1
chr8_1 three_prime_UTR 12494603 12495533 12494603 ID=Msa1179180-mRNA-1:three_prime_utr;Parent=Msa1179180-mRNA-1
Gene Sequence

>Msa1179180

ATGAGTTCATTGGTGAAAAGTCTCTTTGATAGGCACCAAAAGGTGAAGGGAACTGTGGTGTTGATGCAAAAGAATGTGTTGGACATTAACGAACTCACTGCAGCTCAAAGCCCCGGTGGTGTAATTGACGGTTTCTTCGATTTTGCTGGTGATGTTGCCGGTAATGTACTTGACAGCGCCACTGCCTTGTTCCGCCGTTCTGTGGCTCTCTGGCTGATTAGTGCTACCGTTGCTGATGGAACTGGAAAAGGCAAAGTGGGAGAGAAAAAGTTTCTGAAATCTGTTATTACCTCCTTACCAACATTGGGAGATAAACAAAATGCTTTCAGTATTGAATTTGAATGGGTCAATGACATGGGAACTCCAGGAGCTTTTTATATCGAGAATTATCTGCAAGGCGGTGAATTCTTCCTTGTGAGCTTGACTCTTGAAGATGTTCCAAACCATGGAACCATCAGCTTTGTTTGCAACTCATGGACATACCTTCCAAGTGAAACACCAGCTCCATTAGTGTACTACAGACAAGAAGAACTGAAGACTTTAAGAGGAGATGGAACTGGAGAGCGTAAGGAATGGGAAAGAATATATGATTACGATGTCTACAATGATTTGGGTGAGCCTGACAAGAACGCTAGTTTGGCTCGTCCTGTTGTTGGAGGATCTAGCACCTTCCCTTACCCTCGAAGGGGGAGAACCGGCAGGAAACCAGCTAGGAAAGATCCTAAGAGTGAGAGTCCAAGTGACACTGTTTACCTTCCAAGAGATGAATCATTTGGGCACACAAAGTCATCAGACTTTCTTGTTCACATACTCAAATCTGCATCACAAAATGTCATACCTCGGTTGAGATCTATACCTGAGTTTAACACTTTTGAAGATGTGCGCTCGCTCTATGAAGGTGGAATTAAGCTTCCTACTGAAATACTAAGTGAACTTAGCCCAATACCATTGTTCAAGGAACTTTTCCGAACTGATGGTGAAGCGGCCCTTAGGTTTCCACCACCAAAAGTGATTCAAGTGGATCATTCTGCATGGATGACTGATGATGAATTTGCAAGGGAGATGATTGCTGGTGTGAATCCACACATCATCAAAAAACTCTTGGAGTTTCCACCAAAGAGCAAGTTAGATACCCAACTCTTTGGTAATAATACCAGCACCATAACCAAAGAACACTTGCAGCCAAACATGGTTGGGGTCACTGTAGAACAGGCTATCCAAAATAATAAACTGTTCATACTGGATCACCACGACCCACTCTTTCCATATTTGAGGAAAATAAATGCAACCGAGACAAAGGCCTATGCTACAAGAACCATCCTTTTCTTGCAAGATGATGGAACTTTGAAGCCATTGGCCATTGAACTAAGTAGGCCACACCCTCAAGGTGATAGTTTTGGTCCTGTTAGCAATGTTTACTTGCCTGCAAGTGAAGGTGTTGAAGCTTCAATTTGGCTCCTTGCCAAGGCTTACGTAATTGTAAATGATTCATGTTATCACCAACTTGTTAGCCATTGGTATGAATTTCGTTTATGA
Protein sequence

>Msa1179180

MSSLVKSLFDRHQKVKGTVVLMQKNVLDINELTAAQSPGGVIDGFFDFAGDVAGNVLDSATALFRRSVALWLISATVADGTGKGKVGEKKFLKSVITSLPTLGDKQNAFSIEFEWVNDMGTPGAFYIENYLQGGEFFLVSLTLEDVPNHGTISFVCNSWTYLPSETPAPLVYYRQEELKTLRGDGTGERKEWERIYDYDVYNDLGEPDKNASLARPVVGGSSTFPYPRRGRTGRKPARKDPKSESPSDTVYLPRDESFGHTKSSDFLVHILKSASQNVIPRLRSIPEFNTFEDVRSLYEGGIKLPTEILSELSPIPLFKELFRTDGEAALRFPPPKVIQVDHSAWMTDDEFAREMIAGVNPHIIKKLLEFPPKSKLDTQLFGNNTSTITKEHLQPNMVGVTVEQAIQNNKLFILDHHDPLFPYLRKINATETKAYATRTILFLQDDGTLKPLAIELSRPHPQGDSFGPVSNVYLPASEGVEASIWLLAKAYVIVNDSCYHQLVSHWYEFRL*