AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1241350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1241350 MtrunA17_Chr8g0354121 97.250 400 6 1 1 400 1 395 0.0 802
Msa1241350 MtrunA17_Chr3g0081511 69.430 386 106 4 1 377 1 383 0.0 544
Msa1241350 MtrunA17_Chr3g0081421 65.664 399 129 3 1 393 1 397 0.0 539
Msa1241350 MtrunA17_Chr7g0255561 62.205 381 133 6 1 379 1 372 6.53e-168 475
Msa1241350 MtrunA17_Chr7g0255581 62.205 381 133 6 1 379 1 372 6.53e-168 475
Msa1241350 MtrunA17_Chr1g0160171 46.702 379 193 3 6 380 9 382 2.33e-116 344
Msa1241350 MtrunA17_Chr3g0114691 45.550 382 195 5 4 375 11 389 2.26e-114 339
Msa1241350 MtrunA17_Chr1g0182291 49.102 334 162 3 4 336 6 332 5.83e-111 329
Msa1241350 MtrunA17_Chr7g0263101 46.316 380 191 5 1 378 1 369 1.82e-110 328
Msa1241350 MtrunA17_Chr3g0114731 47.059 340 170 4 9 348 14 343 5.66e-104 313
Msa1241350 MtrunA17_Chr1g0160181 44.444 342 186 3 9 349 14 352 1.92e-99 301
Msa1241350 MtrunA17_Chr3g0114711 39.687 383 192 5 6 353 7 385 5.62e-99 300
Msa1241350 MtrunA17_Chr3g0114701 45.773 343 181 5 10 350 6 345 1.80e-93 285
Msa1241350 MtrunA17_Chr1g0186611 39.645 338 195 4 9 344 12 342 3.83e-82 255
Msa1241350 MtrunA17_Chr1g0186601 39.583 336 192 4 9 343 12 337 2.35e-81 253
Msa1241350 MtrunA17_Chr1g0171301 39.286 336 195 4 9 343 12 339 4.02e-81 253
Msa1241350 MtrunA17_Chr8g0334761 39.823 339 193 6 11 343 5 338 5.30e-80 250
Msa1241350 MtrunA17_Chr3g0142131 38.872 337 196 2 10 337 17 352 7.46e-80 251
Msa1241350 MtrunA17_Chr1g0186641 37.752 347 207 4 1 345 1 340 1.89e-79 248
Msa1241350 MtrunA17_Chr2g0278561 39.714 350 200 5 1 346 3 345 2.62e-79 249
Msa1241350 MtrunA17_Chr2g0278541 35.492 386 227 9 7 375 6 386 6.82e-78 246
Msa1241350 MtrunA17_Chr1g0186571 37.500 352 208 4 7 357 7 347 2.49e-77 243
Msa1241350 MtrunA17_Chr7g0271561 39.394 330 196 2 18 344 12 340 6.23e-77 243
Msa1241350 MtrunA17_Chr6g0463971 35.905 337 209 4 10 344 13 344 1.61e-76 241
Msa1241350 MtrunA17_Chr1g0186561 38.719 359 197 8 9 360 12 354 1.17e-75 239
Msa1241350 MtrunA17_Chr6g0483401 39.241 316 191 1 22 337 19 333 1.73e-75 238
Msa1241350 MtrunA17_Chr1g0155761 37.101 345 196 3 10 337 18 358 2.60e-75 239
Msa1241350 MtrunA17_Chr2g0290611 38.110 328 198 4 10 336 9 332 4.08e-75 238
Msa1241350 MtrunA17_Chr3g0129601 36.364 341 205 4 10 345 26 359 1.23e-74 236
Msa1241350 MtrunA17_Chr2g0278551 35.325 385 239 4 12 396 11 385 3.07e-74 236
Msa1241350 MtrunA17_Chr4g0050881 37.572 346 204 8 10 351 6 343 4.08e-73 232
Msa1241350 MtrunA17_Chr4g0050941 36.745 381 229 8 7 381 6 380 2.98e-71 228
Msa1241350 MtrunA17_Chr2g0284261 35.329 334 209 2 7 340 2 328 4.12e-71 227
Msa1241350 MtrunA17_Chr3g0129571 34.946 372 217 8 15 380 9 361 8.64e-71 226
Msa1241350 MtrunA17_Chr4g0051021 36.522 345 212 4 8 351 9 347 7.49e-70 224
Msa1241350 MtrunA17_Chr2g0332001 33.512 373 223 7 10 369 35 395 3.77e-67 218
Msa1241350 MtrunA17_Chr8g0334751 37.941 340 202 5 11 346 6 340 1.16e-66 216
Msa1241350 MtrunA17_Chr4g0050891 34.954 329 208 4 6 331 6 331 1.45e-66 215
Msa1241350 MtrunA17_Chr2g0310441 35.588 340 200 6 11 341 5 334 2.96e-66 215
Msa1241350 MtrunA17_Chr1g0160111 32.370 346 224 3 22 358 16 360 2.35e-64 210
Msa1241350 MtrunA17_Chr3g0129591 35.905 337 207 6 15 347 7 338 2.56e-64 209
Msa1241350 MtrunA17_Chr1g0164831 34.627 335 207 5 13 344 3 328 2.59e-64 209
Msa1241350 MtrunA17_Chr8g0334771 36.657 341 201 6 11 343 5 338 7.33e-64 209
Msa1241350 MtrunA17_Chr1g0184221 30.398 352 222 3 9 346 12 354 3.23e-63 207
Msa1241350 MtrunA17_Chr4g0059311 33.036 336 215 5 15 346 13 342 5.79e-62 203
Msa1241350 MtrunA17_Chr8g0383731 33.929 336 213 4 15 345 7 338 6.10e-61 200
Msa1241350 MtrunA17_Chr1g0177221 39.764 254 144 4 13 264 18 264 1.10e-59 194
Msa1241350 MtrunA17_Chr5g0413921 34.783 322 201 5 18 337 12 326 7.96e-59 195
Msa1241350 MtrunA17_Chr5g0413941 33.333 336 203 6 10 337 4 326 2.19e-58 194
Msa1241350 MtrunA17_Chr3g0129581 37.092 337 203 5 15 347 7 338 2.65e-58 194
Msa1241350 MtrunA17_Chr1g0150151 31.214 346 230 5 7 348 5 346 3.63e-58 194
Msa1241350 MtrunA17_Chr4g0073241 33.636 330 202 5 18 341 13 331 2.66e-57 191
Msa1241350 MtrunA17_Chr3g0126101 33.538 325 205 5 20 344 16 329 1.38e-54 184
Msa1241350 MtrunA17_Chr5g0413961 30.882 340 225 4 7 345 8 338 2.11e-54 183
Msa1241350 MtrunA17_Chr7g0227921 33.038 339 213 8 9 343 7 335 3.89e-54 183
Msa1241350 MtrunA17_Chr5g0413951 31.515 330 205 6 16 337 10 326 1.29e-53 181
Msa1241350 MtrunA17_Chr4g0050931 31.672 341 188 4 4 340 3 302 8.24e-53 178
Msa1241350 MtrunA17_Chr4g0051001 33.548 310 200 4 7 314 25 330 2.15e-52 177
Msa1241350 MtrunA17_Chr5g0413931 32.424 330 212 6 18 344 11 332 3.52e-50 172
Msa1241350 MtrunA17_Chr5g0408001 32.764 351 214 6 1 337 1 343 1.30e-49 172
Msa1241350 MtrunA17_Chr5g0428881 26.371 383 274 4 3 379 4 384 1.42e-47 166
Msa1241350 MtrunA17_Chr5g0407971 31.054 351 221 7 1 337 1 344 3.79e-47 165
Msa1241350 MtrunA17_Chr5g0408031 31.085 341 220 3 10 337 7 345 3.53e-46 162
Msa1241350 MtrunA17_Chr5g0408041 32.153 339 215 3 12 337 10 346 4.22e-46 162
Msa1241350 MtrunA17_Chr5g0407991 31.858 339 212 5 13 337 9 342 8.98e-46 162
Msa1241350 MtrunA17_Chr5g0441761 29.595 321 214 4 17 336 18 327 1.09e-45 160
Msa1241350 MtrunA17_Chr6g0451211 31.562 320 206 6 33 348 32 342 4.91e-44 156
Msa1241350 MtrunA17_Chr6g0451261 30.794 315 211 5 4 317 2 310 5.32e-43 160
Msa1241350 MtrunA17_Chr6g0451171 29.762 336 216 7 22 347 21 346 7.98e-43 153
Msa1241350 MtrunA17_Chr6g0451201 30.721 319 205 5 33 348 32 337 2.42e-42 152
Msa1241350 MtrunA17_Chr3g0126091 25.225 333 241 3 15 344 13 340 3.11e-41 149
Msa1241350 MtrunA17_Chr8g0334711 40.722 194 109 4 18 210 15 203 1.18e-40 143
Msa1241350 MtrunA17_Chr1g0211801 32.171 258 169 4 7 264 5 256 1.26e-39 142
Msa1241350 MtrunA17_Chr8g0369841 28.024 339 225 5 13 337 9 342 2.05e-39 144
Msa1241350 MtrunA17_Chr5g0429001 26.846 298 204 3 63 347 1 297 2.51e-37 137
Msa1241350 MtrunA17_Chr6g0451251 29.787 329 216 6 18 342 17 334 5.54e-37 137
Msa1241350 MtrunA17_Chr2g0278021 34.058 276 160 7 127 395 1 261 5.61e-37 135
Msa1241350 MtrunA17_Chr3g0084091 28.279 244 171 2 93 336 10 249 1.16e-35 132
Msa1241350 MtrunA17_Chr4g0056081 28.653 349 217 10 5 337 6 338 8.24e-34 129
Msa1241350 MtrunA17_Chr5g0404811 31.169 231 152 4 121 350 1 225 4.69e-33 124
Msa1241350 MtrunA17_Chr5g0399281 29.204 339 213 9 10 336 5 328 4.27e-30 119
Msa1241350 MtrunA17_Chr6g0451191 28.384 229 148 3 127 347 1 221 2.81e-28 111
Msa1241350 MtrunA17_Chr1g0182261 41.096 146 75 5 211 346 83 227 3.73e-26 105
Msa1241350 MtrunA17_Chr1g0182261 41.558 77 45 0 9 85 10 86 4.23e-13 68.6
Msa1241350 MtrunA17_Chr5g0404801 43.590 117 66 0 10 126 4 120 4.75e-25 99.0
Msa1241350 MtrunA17_Chr2g0278031 42.982 114 65 0 10 123 11 124 1.03e-24 98.2
Msa1241350 MtrunA17_Chr8g0334731 34.466 206 105 8 11 210 6 187 1.81e-24 99.8
Msa1241350 MtrunA17_Chr8g0334721 40.517 116 69 0 231 346 4 119 3.35e-23 95.1
Msa1241350 MtrunA17_Chr1g0177231 51.250 80 39 0 265 344 29 108 8.98e-21 87.4
Msa1241350 MtrunA17_Chr1g0172881 32.192 146 77 5 124 264 21 149 1.49e-18 82.0
Msa1241350 MtrunA17_Chr1g0172891 50.725 69 34 0 269 337 11 79 6.49e-18 79.0
Msa1241350 MtrunA17_Chr4g0050911 32.812 128 79 2 93 214 11 137 1.45e-17 79.7
Msa1241350 MtrunA17_Chr8g0372571 68.182 44 14 0 244 287 2 45 4.83e-17 75.5
Msa1241350 MtrunA17_Chr4g0021721 68.182 44 14 0 244 287 2 45 6.56e-17 74.3
Msa1241350 MtrunA17_Chr1g0211811 39.241 79 48 0 266 344 1 79 2.44e-15 70.9
Msa1241350 MtrunA17_Chr6g0451241 44.928 69 38 0 280 348 23 91 2.66e-14 68.9
Msa1241350 MtrunA17_Chr4g0050921 34.375 96 61 1 219 314 8 101 6.19e-14 68.6
Msa1241350 MtrunA17_Chr1g0182251 60.465 43 17 0 72 114 1 43 4.94e-12 60.5
Msa1241350 MtrunA17_Chr1g0150651 33.333 84 54 1 127 210 1 82 4.56e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1241350 AT5G07050.1 62.990 408 136 5 1 400 1 401 2.04e-180 508
Msa1241350 AT2G40900.1 52.747 364 154 5 10 367 7 358 9.46e-139 402
Msa1241350 AT3G56620.1 55.077 325 137 3 10 334 7 322 3.08e-128 374
Msa1241350 AT1G21890.1 47.861 374 181 5 10 372 7 377 8.81e-117 345
Msa1241350 AT2G39510.1 45.573 384 189 8 8 388 2 368 3.37e-113 336
Msa1241350 AT2G37460.1 46.631 371 180 6 4 370 5 361 1.04e-111 332
Msa1241350 AT1G44800.1 46.567 335 174 2 5 339 2 331 4.78e-111 330
Msa1241350 AT4G08300.1 43.236 377 204 5 5 377 2 372 1.54e-107 321
Msa1241350 AT4G08290.1 45.015 331 179 2 6 336 5 332 1.09e-104 315
Msa1241350 AT1G21890.2 50.323 310 148 2 10 314 7 315 6.55e-104 311
Msa1241350 AT5G13670.1 41.775 383 204 6 9 388 3 369 1.82e-99 301
Msa1241350 AT2G37450.2 45.000 320 147 4 18 336 13 304 3.09e-84 260
Msa1241350 AT1G75500.1 38.095 378 211 6 10 368 16 389 1.85e-81 255
Msa1241350 AT1G75500.2 38.095 378 211 6 10 368 16 389 1.85e-81 255
Msa1241350 AT1G09380.1 38.298 329 192 4 10 333 4 326 7.43e-81 253
Msa1241350 AT3G18200.2 40.303 330 186 5 10 337 31 351 6.89e-76 241
Msa1241350 AT4G08290.2 41.473 258 148 2 6 263 5 259 3.50e-72 228
Msa1241350 AT4G30420.2 37.273 330 199 4 10 336 5 329 2.74e-71 229
Msa1241350 AT4G30420.1 37.461 323 194 4 17 336 2 319 1.50e-70 226
Msa1241350 AT3G30340.1 36.061 330 205 3 21 349 18 342 2.80e-70 225
Msa1241350 AT5G64700.1 34.985 343 215 3 10 347 4 343 1.93e-69 223
Msa1241350 AT3G53210.1 36.086 327 205 2 10 336 6 328 7.28e-68 219
Msa1241350 AT1G25270.1 35.583 326 207 3 12 337 1 323 1.18e-63 208
Msa1241350 AT1G43650.1 35.562 329 203 4 13 340 6 326 1.13e-61 202
Msa1241350 AT1G68170.2 35.366 328 210 2 9 336 8 333 1.61e-61 203
Msa1241350 AT1G68170.1 35.692 325 207 2 12 336 1 323 1.95e-61 202
Msa1241350 AT2G37450.3 44.770 239 124 3 99 336 1 232 1.14e-60 197
Msa1241350 AT4G28040.1 33.134 335 202 7 13 343 7 323 1.82e-60 200
Msa1241350 AT4G28040.5 33.134 335 202 7 13 343 7 323 1.82e-60 200
Msa1241350 AT4G28040.3 33.134 335 202 7 13 343 7 323 1.82e-60 200
Msa1241350 AT4G28040.4 33.134 335 202 7 13 343 7 323 1.82e-60 200
Msa1241350 AT4G28040.2 33.134 335 202 7 13 343 7 323 1.82e-60 200
Msa1241350 AT4G01440.1 34.277 318 199 4 29 342 25 336 2.80e-59 197
Msa1241350 AT4G01430.1 30.791 354 231 7 26 377 21 362 5.22e-54 183
Msa1241350 AT5G40210.1 35.241 332 187 7 16 345 15 320 7.89e-54 182
Msa1241350 AT1G01070.1 32.407 324 206 5 18 336 20 335 5.23e-52 178
Msa1241350 AT4G01440.3 33.449 287 184 3 29 314 25 305 8.95e-52 176
Msa1241350 AT1G11450.3 32.298 322 207 4 18 336 20 333 4.20e-51 175
Msa1241350 AT5G40240.1 30.746 335 226 5 10 342 16 346 4.23e-50 173
Msa1241350 AT5G40240.3 30.746 335 226 5 10 342 16 346 4.23e-50 173
Msa1241350 AT2G37450.1 44.340 212 110 3 126 336 61 265 5.10e-50 171
Msa1241350 AT2G37450.1 63.265 49 18 0 18 66 13 61 1.00e-12 68.9
Msa1241350 AT3G28050.1 30.435 322 214 4 16 336 14 326 5.73e-50 172
Msa1241350 AT5G40240.2 30.746 335 226 5 10 342 30 360 6.29e-50 173
Msa1241350 AT3G28100.1 31.915 329 213 6 16 340 16 337 8.28e-49 169
Msa1241350 AT1G11460.1 31.269 323 210 5 18 336 20 334 8.59e-49 169
Msa1241350 AT5G40230.1 31.437 334 225 4 10 342 17 347 1.32e-48 169
Msa1241350 AT3G53210.2 36.032 247 154 2 90 336 29 271 1.37e-47 165
Msa1241350 AT1G11450.5 33.219 292 184 4 48 336 6 289 1.55e-46 162
Msa1241350 AT3G53210.3 34.979 243 154 2 10 252 6 244 1.72e-46 160
Msa1241350 AT3G30340.2 34.351 262 163 4 18 278 15 268 8.45e-46 159
Msa1241350 AT1G70260.1 26.686 341 241 4 10 344 8 345 1.19e-45 161
Msa1241350 AT1G11450.2 32.872 289 183 4 51 336 2 282 7.40e-45 157
Msa1241350 AT3G18200.1 38.696 230 130 5 110 337 1 221 1.14e-44 155
Msa1241350 AT4G01430.2 31.597 288 192 3 29 314 24 308 1.44e-44 157
Msa1241350 AT5G45370.2 30.548 347 224 5 2 337 12 352 2.43e-44 158
Msa1241350 AT5G45370.4 30.548 347 224 5 2 337 12 352 2.43e-44 158
Msa1241350 AT4G15540.1 29.769 346 222 5 4 344 3 332 3.84e-44 157
Msa1241350 AT4G15540.2 29.769 346 222 5 4 344 3 332 3.84e-44 157
Msa1241350 AT5G64700.2 32.692 260 167 3 10 264 4 260 4.09e-44 154
Msa1241350 AT1G01070.2 31.399 293 195 4 45 336 1 288 4.73e-44 155
Msa1241350 AT5G45370.1 30.655 336 214 4 2 337 12 328 1.28e-43 155
Msa1241350 AT3G28130.2 30.864 324 215 7 16 336 15 332 5.77e-43 154
Msa1241350 AT3G28070.1 30.183 328 220 5 16 340 19 340 1.51e-42 153
Msa1241350 AT3G28070.2 32.653 245 162 2 96 340 7 248 2.16e-42 150
Msa1241350 AT4G01440.4 33.755 237 150 3 29 264 25 255 1.65e-41 147
Msa1241350 AT1G11450.4 30.667 300 197 4 18 314 20 311 2.89e-41 148
Msa1241350 AT5G47470.1 30.114 352 207 10 5 339 21 350 5.36e-41 149
Msa1241350 AT5G47470.2 30.114 352 207 10 5 339 49 378 6.13e-41 149
Msa1241350 AT3G45870.1 29.552 335 227 3 4 331 2 334 7.41e-41 149
Msa1241350 AT5G47470.3 30.114 352 207 10 5 339 49 378 7.49e-41 149
Msa1241350 AT3G28080.1 30.368 326 216 6 16 337 16 334 7.92e-41 148
Msa1241350 AT4G24980.1 29.032 310 149 6 28 337 1 239 1.59e-39 142
Msa1241350 AT3G28130.5 33.333 243 155 5 96 336 9 246 2.94e-39 142
Msa1241350 AT3G28130.1 33.333 243 155 5 96 336 9 246 2.94e-39 142
Msa1241350 AT4G01450.2 32.198 323 207 5 26 346 21 333 3.03e-39 144
Msa1241350 AT3G28080.5 32.365 241 158 3 98 337 9 245 3.86e-39 141
Msa1241350 AT3G28080.7 32.365 241 158 3 98 337 9 245 3.86e-39 141
Msa1241350 AT3G28080.8 32.365 241 158 3 98 337 9 245 3.86e-39 141
Msa1241350 AT3G28080.6 32.365 241 158 3 98 337 9 245 3.86e-39 141
Msa1241350 AT3G28080.2 31.154 260 169 4 98 351 90 345 4.25e-38 140
Msa1241350 AT4G19185.1 29.641 334 222 5 15 337 22 353 1.69e-36 137
Msa1241350 AT4G01440.5 32.328 232 147 4 115 342 3 228 7.46e-36 132
Msa1241350 AT4G01440.2 32.328 232 147 4 115 342 3 228 7.46e-36 132
Msa1241350 AT4G01450.1 31.271 291 188 5 26 314 21 301 1.37e-35 134
Msa1241350 AT1G43650.2 31.349 252 165 3 13 264 6 249 5.80e-35 130
Msa1241350 AT3G45870.8 28.616 318 218 3 4 314 2 317 2.19e-34 130
Msa1241350 AT1G11450.1 31.452 248 159 4 92 336 2 241 3.16e-34 128
Msa1241350 AT4G16620.1 29.480 346 198 7 22 344 20 342 1.98e-33 128
Msa1241350 AT4G01450.4 33.480 227 139 5 26 250 21 237 1.50e-32 124
Msa1241350 AT3G28070.3 28.808 302 206 5 16 314 19 314 2.28e-32 124
Msa1241350 AT4G01450.3 34.300 207 125 4 26 230 21 218 8.09e-31 118
Msa1241350 AT3G28070.5 31.308 214 144 2 127 340 1 211 2.41e-30 117
Msa1241350 AT3G28100.3 31.452 248 160 5 16 259 16 257 5.76e-30 117
Msa1241350 AT1G60050.1 25.073 343 247 6 9 343 8 348 5.81e-30 119
Msa1241350 AT3G45870.9 29.297 256 173 2 4 252 2 256 1.19e-28 113
Msa1241350 AT3G28130.3 32.547 212 136 5 127 336 1 207 3.63e-28 111
Msa1241350 AT3G28080.3 27.744 328 168 9 16 337 16 280 6.18e-28 112
Msa1241350 AT3G28080.9 31.132 212 141 3 127 337 1 208 6.61e-28 110
Msa1241350 AT4G01430.3 28.692 237 156 6 142 377 1 225 2.13e-27 108
Msa1241350 AT4G19185.2 27.907 258 173 5 91 337 20 275 1.13e-26 109
Msa1241350 AT5G45370.6 29.482 251 164 4 98 337 2 250 1.14e-26 108
Msa1241350 AT5G45370.5 29.482 251 164 4 98 337 2 250 1.14e-26 108
Msa1241350 AT3G28080.4 28.807 243 110 6 98 337 9 191 5.07e-26 104
Msa1241350 AT4G16620.4 30.224 268 142 6 99 344 1 245 9.31e-24 99.8
Msa1241350 AT4G16620.2 30.224 268 142 6 99 344 1 245 9.31e-24 99.8
Msa1241350 AT3G28130.4 28.226 248 170 6 16 260 15 257 3.01e-23 98.6
Msa1241350 AT3G28100.2 32.178 202 127 5 16 213 16 211 3.58e-23 98.2
Msa1241350 AT3G45870.5 28.511 235 158 4 105 331 27 259 6.62e-23 98.6
Msa1241350 AT4G16620.3 29.060 234 132 4 22 241 20 233 4.23e-21 92.8
Msa1241350 AT3G28130.6 29.612 206 138 5 16 219 15 215 5.61e-19 85.5
Msa1241350 AT5G45370.3 28.054 221 146 4 128 337 74 292 3.27e-18 85.1
Msa1241350 AT3G45870.6 27.064 218 149 4 105 314 27 242 8.41e-17 80.1
Msa1241350 AT3G45870.7 27.064 218 149 4 105 314 27 242 8.41e-17 80.1
Msa1241350 AT3G45870.2 27.273 165 118 2 167 331 21 183 1.63e-12 67.0
Msa1241350 AT3G45870.3 27.564 156 104 3 105 252 27 181 5.41e-11 62.0

Find 101 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTTGAGCACCCTTTAT+TGG 0.161865 8_2:-24907643 None:intergenic
ACTTCACTTGTGGTCTTTAT+TGG 0.168621 8_2:+24906243 Msa1241350:CDS
TAGGCTTATATTCTGTTCTA+TGG 0.243269 8_2:+24907572 Msa1241350:CDS
GCTATGATATGTTTACAATT+TGG 0.247586 8_2:+24904633 Msa1241350:CDS
AAAATTCGGAATGTTATCTT+AGG 0.260272 8_2:-24904876 None:intergenic
TGATATTCCTTTGCCAATAA+AGG 0.262662 8_2:+24907630 Msa1241350:CDS
GGGAGGAAAACTTGGTAAAA+AGG 0.288619 8_2:-24907879 None:intergenic
AAGAGAAATGGAATATGATT+AGG 0.298114 8_2:+24907813 Msa1241350:three_prime_UTR
GGTGCCATCTTGATTGTTAT+AGG 0.303386 8_2:+24907553 Msa1241350:CDS
TGAAAATTTGCAAGAAAATT+CGG 0.322415 8_2:-24904890 None:intergenic
CCAACTAATCCATGTAGAAA+TGG 0.325945 8_2:+24907964 Msa1241350:three_prime_UTR
AAGGGACAAAATGGGGATAA+TGG 0.328075 8_2:-24907860 None:intergenic
CCATTTCTACATGGATTAGT+TGG 0.345012 8_2:-24907964 None:intergenic
ATGTACAAGGGCTGGTGATT+AGG 0.352651 8_2:+24906786 Msa1241350:CDS
TATTTGAGAAGAAACTAGAT+AGG 0.353240 8_2:-24904540 None:intergenic
TTATCATTGCCACCTTTGCT+TGG 0.363715 8_2:+24906015 Msa1241350:CDS
GAGATGCCAAGCAAAGATAT+TGG 0.370414 8_2:+24905833 Msa1241350:CDS
GATCAAAATTTCTATTATGC+TGG 0.374704 8_2:+24905200 Msa1241350:CDS
CAGGATCTTCTGAAAGAGAT+TGG 0.374788 8_2:+24905973 Msa1241350:CDS
GATATTCCTTTGCCAATAAA+GGG 0.379436 8_2:+24907631 Msa1241350:CDS
TATCATTGCCACCTTTGCTT+GGG 0.380505 8_2:+24906016 Msa1241350:CDS
ATGCTAATGACATTATATAA+AGG 0.391959 8_2:+24905882 Msa1241350:CDS
AATCTGTTCTGCAAGGATAA+AGG 0.397927 8_2:-24906876 None:intergenic
TGTTTACAATTTGGCTATGC+TGG 0.398259 8_2:+24904642 Msa1241350:CDS
GCTCAAATGAGTGGAAATTC+AGG 0.402269 8_2:+24907655 Msa1241350:CDS
GATGATCATTGTTGCAATCA+TGG 0.415373 8_2:+24906850 Msa1241350:CDS
TCATTGCACATGAGAAGGTT+GGG 0.416560 8_2:-24905238 None:intergenic
AGGCTTATATTCTGTTCTAT+GGG 0.421194 8_2:+24907573 Msa1241350:CDS
CAACTAATCCATGTAGAAAT+GGG 0.428119 8_2:+24907965 Msa1241350:three_prime_UTR
ATCAAAATTTCTATTATGCT+GGG 0.431799 8_2:+24905201 Msa1241350:CDS
CTTCTGTATGGAGGATTGGT+TGG 0.434265 8_2:+24906310 Msa1241350:CDS
CTCTCAAACATAAATGCAAA+TGG 0.436031 8_2:-24904759 None:intergenic
GTCCTATTGTGGAGATGGTA+TGG 0.436646 8_2:+24905904 Msa1241350:CDS
AGATGCCAAGCAAAGATATT+GGG 0.446672 8_2:+24905834 Msa1241350:CDS
TTCTGTATGGAGGATTGGTT+GGG 0.449804 8_2:+24906311 Msa1241350:CDS
GCCCATACCATCTCCACAAT+AGG 0.458933 8_2:-24905906 None:intergenic
CAAACAGTACAAGGGGTGAT+GGG 0.465603 8_2:-24907902 None:intergenic
CTCATTGCACATGAGAAGGT+TGG 0.466381 8_2:-24905239 None:intergenic
GATCCTTCTGTATGGAGGAT+TGG 0.467856 8_2:+24906306 Msa1241350:CDS
TTATGATTCCCATTTCTACA+TGG 0.485582 8_2:-24907973 None:intergenic
CTGTTCCCAATATCTTTGCT+TGG 0.486385 8_2:-24905839 None:intergenic
GGACATAGTGGCTCATTCCT+TGG 0.492407 8_2:-24904695 None:intergenic
CTGAGCATGATCCTTCTGTA+TGG 0.494380 8_2:+24906298 Msa1241350:CDS
CTTGCAGAACAGATTTACTC+TGG 0.496224 8_2:+24906884 Msa1241350:CDS
GATCATCATAAGTGGGCTAA+AGG 0.497400 8_2:-24906834 None:intergenic
GGGAATTGTGACCTCAAGCT+TGG 0.497579 8_2:+24906757 Msa1241350:intron
CATTTGCATTTATGTTTGAG+AGG 0.499498 8_2:+24904760 Msa1241350:CDS
CTAAAGGCAGTTGCAAAGAC+AGG 0.501855 8_2:-24906818 None:intergenic
CTATGTGGGTGCAGTGTGAT+GGG 0.505357 8_2:+24907532 Msa1241350:intron
ATGCTTATTGCAACTGAAGA+AGG 0.505392 8_2:-24907739 None:intergenic
TGGTATGAACATTATCACTA+AGG 0.506134 8_2:+24904662 Msa1241350:CDS
TCAAACAGTACAAGGGGTGA+TGG 0.506594 8_2:-24907903 None:intergenic
GCCATCACAAAAGTCATGGC+TGG 0.507574 8_2:-24905272 None:intergenic
ACTATGTGGGTGCAGTGTGA+TGG 0.518714 8_2:+24907531 Msa1241350:intron
GCAACAATGATCATCATAAG+TGG 0.519358 8_2:-24906842 None:intergenic
TTAGTAGTAAGCTCTCTAGT+AGG 0.522491 8_2:-24907763 None:intergenic
TGAGCACCCTTTATTGGCAA+AGG 0.522528 8_2:-24907637 None:intergenic
ACAGTACAAGGGGTGATGGG+GGG 0.526940 8_2:-24907899 None:intergenic
AGCTTGGCATACTATGTACA+AGG 0.527654 8_2:+24906773 Msa1241350:CDS
TATTGTAGTATAGAGAAAAG+AGG 0.528082 8_2:-24904498 None:intergenic
TAAAGGTCCTATTGTGGAGA+TGG 0.529191 8_2:+24905899 Msa1241350:CDS
GGAACAGTATTGACAGTAGC+TGG 0.536170 8_2:+24905855 Msa1241350:CDS
GAGGAAGAACACTTGCAAGA+AGG 0.542054 8_2:-24904479 None:intergenic
GGCATACTATGTACAAGGGC+TGG 0.542406 8_2:+24906778 Msa1241350:CDS
ATATTTGCTCAAACAGTACA+AGG 0.543704 8_2:-24907911 None:intergenic
AAACAGTACAAGGGGTGATG+GGG 0.548665 8_2:-24907901 None:intergenic
GGGCTGGTGATTAGGAAGAA+AGG 0.554147 8_2:+24906794 Msa1241350:CDS
CAGAACAGATTTACTCTGGA+GGG 0.561325 8_2:+24906888 Msa1241350:CDS
ATCTCTTTCAGAAGATCCTG+TGG 0.563505 8_2:-24905970 None:intergenic
GATAAACGACGAGGACATAG+TGG 0.564461 8_2:-24904707 None:intergenic
ATGGAAGATCCTTACAGCAT+AGG 0.565176 8_2:-24906355 None:intergenic
ATGATCATTGTTGCAATCAT+GGG 0.565857 8_2:+24906851 Msa1241350:CDS
TCCTATTGTGGAGATGGTAT+GGG 0.568336 8_2:+24905905 Msa1241350:CDS
TAAGCCTATAACAATCAAGA+TGG 0.569495 8_2:-24907557 None:intergenic
AACAGTACAAGGGGTGATGG+GGG 0.577126 8_2:-24907900 None:intergenic
GTAATGCTTCATGTTCTCAA+AGG 0.583502 8_2:-24904607 None:intergenic
GAGTGAAGCCCAAGCAAAGG+TGG 0.584171 8_2:-24906024 None:intergenic
AACTGCCATCACAAAAGTCA+TGG 0.584413 8_2:-24905276 None:intergenic
AGACTAACCCAAGAAGAGCT+AGG 0.585417 8_2:-24904914 None:intergenic
ATTATATAAAGGTCCTATTG+TGG 0.588030 8_2:+24905893 Msa1241350:CDS
ACTAAGTCTTACTTCACTTG+TGG 0.588891 8_2:+24906233 Msa1241350:CDS
CAACAATGATCATCATAAGT+GGG 0.593912 8_2:-24906841 None:intergenic
GTTGCTCATTGCACATGAGA+AGG 0.595702 8_2:-24905243 None:intergenic
ACACATGAAACAACAACCAC+AGG 0.596729 8_2:+24905954 Msa1241350:CDS
CAGAGTAAATCTGTTCTGCA+AGG 0.604588 8_2:-24906883 None:intergenic
TGTTCTATGGGGAAAGCACA+AGG 0.606487 8_2:+24907585 Msa1241350:CDS
TACATAGTATGCCAAGCTTG+AGG 0.608423 8_2:-24906768 None:intergenic
AAAGAGTGAAGCCCAAGCAA+AGG 0.613193 8_2:-24906027 None:intergenic
CAACCAATCCTCCATACAGA+AGG 0.613695 8_2:-24906309 None:intergenic
TAGAAGCAGTTGCAAAAGCG+TGG 0.617111 8_2:-24904731 None:intergenic
CATTGCACATGAGAAGGTTG+GGG 0.624605 8_2:-24905237 None:intergenic
ATAAAGGGTGCTCAAATGAG+TGG 0.625024 8_2:+24907646 Msa1241350:CDS
AGCATGATCCTTCTGTATGG+AGG 0.629537 8_2:+24906301 Msa1241350:CDS
GGCTTATATTCTGTTCTATG+GGG 0.631913 8_2:+24907574 Msa1241350:CDS
ATTTGCTCAAACAGTACAAG+GGG 0.635629 8_2:-24907909 None:intergenic
GCAGAACAGATTTACTCTGG+AGG 0.643564 8_2:+24906887 Msa1241350:CDS
ACTAAGGTTTCTCTCAACCA+AGG 0.665839 8_2:+24904678 Msa1241350:CDS
TATTTGCTCAAACAGTACAA+GGG 0.680212 8_2:-24907910 None:intergenic
GACACAGATCAAGTAAAACA+TGG 0.688084 8_2:+24907691 Msa1241350:CDS
GCTTGGCATACTATGTACAA+GGG 0.749546 8_2:+24906774 Msa1241350:CDS
AAGCGTGGCGATAAACGACG+AGG 0.774739 8_2:-24904716 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTTTATATTAAAAAAA+TGG - chr8_2:24906996-24907015 None:intergenic 0.0%
!! ATTACTAAGAAAATAAAAAT+AGG + chr8_2:24905624-24905643 Msa1241350:intron 10.0%
!! TTACTAAGAAAATAAAAATA+GGG + chr8_2:24905625-24905644 Msa1241350:intron 10.0%
!! CAAAAATAATAAATTAACAA+TGG - chr8_2:24905683-24905702 None:intergenic 10.0%
!!! CATTGTTAATTTATTATTTT+TGG + chr8_2:24905681-24905700 Msa1241350:intron 10.0%
!!! TTTTGTTTTTAAATATGAAA+AGG + chr8_2:24905784-24905803 Msa1241350:intron 10.0%
!! ATATTTGATCAATAAATTAC+AGG + chr8_2:24905168-24905187 Msa1241350:intron 15.0%
!!! CAAAATTCAGATTATTTTAA+GGG + chr8_2:24905315-24905334 Msa1241350:intron 15.0%
!!! TTTTTGTGCAAATTATTAAT+TGG + chr8_2:24906173-24906192 Msa1241350:intron 15.0%
!!! TTTTGTGCAAATTATTAATT+GGG + chr8_2:24906174-24906193 Msa1241350:intron 15.0%
!!! AGATAAAAACATTTTTTTAG+AGG - chr8_2:24906393-24906412 None:intergenic 15.0%
!! TTCAAAAAATTGTCAAAAAA+TGG - chr8_2:24906586-24906605 None:intergenic 15.0%
!! TTAATATACACTTATTACTT+GGG - chr8_2:24907106-24907125 None:intergenic 15.0%
!! AAAAAAAAAATCTAGACATA+GGG - chr8_2:24907185-24907204 None:intergenic 15.0%
!!! ATAAAAAGTTTTAAGAGAAA+TGG + chr8_2:24907801-24907820 Msa1241350:exon 15.0%
!! AATCAATAACCAAAGAAAAA+TGG + chr8_2:24904566-24904585 Msa1241350:exon 20.0%
!! TGAAAATTTGCAAGAAAATT+CGG - chr8_2:24904893-24904912 None:intergenic 20.0%
!!! AAGCATATAGTTTTTAGATT+TGG - chr8_2:24905003-24905022 None:intergenic 20.0%
!! GTTACTAAAAAGTTAATACA+TGG + chr8_2:24905070-24905089 Msa1241350:intron 20.0%
!! ATCAAAATTTCTATTATGCT+GGG + chr8_2:24905201-24905220 Msa1241350:CDS 20.0%
!!! CCTTAAAATAATCTGAATTT+TGG - chr8_2:24905317-24905336 None:intergenic 20.0%
!!! CCAAAATTCAGATTATTTTA+AGG + chr8_2:24905314-24905333 Msa1241350:intron 20.0%
!! ATTATGAAGAAATTGGAAAA+AGG + chr8_2:24905359-24905378 Msa1241350:intron 20.0%
!!! GTTTTTAAATATGAAAAGGA+TGG + chr8_2:24905788-24905807 Msa1241350:intron 20.0%
!! ATGCTAATGACATTATATAA+AGG + chr8_2:24905882-24905901 Msa1241350:CDS 20.0%
!!! ATTCTTACTCTCTTTTATTT+TGG + chr8_2:24906629-24906648 Msa1241350:intron 20.0%
!! TTACTATTGTAATTCTTAGA+AGG + chr8_2:24906698-24906717 Msa1241350:intron 20.0%
!! CTTAATATACACTTATTACT+TGG - chr8_2:24907107-24907126 None:intergenic 20.0%
!! GAAAAAAAAAATCTAGACAT+AGG - chr8_2:24907186-24907205 None:intergenic 20.0%
!! TGACAAAATTTAATACAAGT+TGG - chr8_2:24907462-24907481 None:intergenic 20.0%
!!! AAATTTTGTCATCATTCAAA+TGG + chr8_2:24907471-24907490 Msa1241350:intron 20.0%
!!! CTAACTAAAGAATTTGATTT+TGG + chr8_2:24907508-24907527 Msa1241350:intron 20.0%
! TATTGTAGTATAGAGAAAAG+AGG - chr8_2:24904501-24904520 None:intergenic 25.0%
! TATTTGAGAAGAAACTAGAT+AGG - chr8_2:24904543-24904562 None:intergenic 25.0%
! GCTATGATATGTTTACAATT+TGG + chr8_2:24904633-24904652 Msa1241350:CDS 25.0%
! CAAATTAATGCTAACTCTTA+TGG + chr8_2:24904829-24904848 Msa1241350:intron 25.0%
! TCTTATGGTTTCATATTTGT+AGG + chr8_2:24904844-24904863 Msa1241350:intron 25.0%
! AAAATTCGGAATGTTATCTT+AGG - chr8_2:24904879-24904898 None:intergenic 25.0%
!!! ATGCTTTTTTATCTTTGAAG+AGG + chr8_2:24905017-24905036 Msa1241350:intron 25.0%
!!! TGCTTTTTTATCTTTGAAGA+GGG + chr8_2:24905018-24905037 Msa1241350:intron 25.0%
!!! TAGAAATTTTGATCAATCAC+TGG - chr8_2:24905194-24905213 None:intergenic 25.0%
! GATCAAAATTTCTATTATGC+TGG + chr8_2:24905200-24905219 Msa1241350:CDS 25.0%
! AGACAAGATTATGAAGAAAT+TGG + chr8_2:24905352-24905371 Msa1241350:intron 25.0%
! TGACTACTAAAAAGAACTTA+TGG - chr8_2:24905722-24905741 None:intergenic 25.0%
! ATTATATAAAGGTCCTATTG+TGG + chr8_2:24905893-24905912 Msa1241350:CDS 25.0%
!!! ATTTTGAGGATGTCTATTTT+TGG - chr8_2:24905931-24905950 None:intergenic 25.0%
! TGCAAATTATTAATTGGGTT+AGG + chr8_2:24906179-24906198 Msa1241350:intron 25.0%
! TTAGAGGTAAGTTAAAATCA+TGG - chr8_2:24906377-24906396 None:intergenic 25.0%
!! ATTTTCTTGCCAATATATTG+AGG - chr8_2:24907046-24907065 None:intergenic 25.0%
!! TACTTGGGTTTTACTAAATT+TGG - chr8_2:24907091-24907110 None:intergenic 25.0%
!! TAACTTGTATTAATGCAACA+TGG - chr8_2:24907131-24907150 None:intergenic 25.0%
! ATTTAAATCAGAAAGCTAGT+AGG - chr8_2:24907225-24907244 None:intergenic 25.0%
! CACACTTAATACTTCTTTAT+AGG - chr8_2:24907255-24907274 None:intergenic 25.0%
!! GAAGTATTAAGTGTGTATTA+AGG + chr8_2:24907260-24907279 Msa1241350:intron 25.0%
!!! AATTTGATTTTGGACTATGT+GGG + chr8_2:24907518-24907537 Msa1241350:intron 25.0%
!! CTCTTAAAACTTTTTATTGC+TGG - chr8_2:24907798-24907817 None:intergenic 25.0%
! AAGAGAAATGGAATATGATT+AGG + chr8_2:24907813-24907832 Msa1241350:three_prime_UTR 25.0%
!! AAAGGAATTTGATTTTTCCG+TGG - chr8_2:24904592-24904611 None:intergenic 30.0%
TGGTATGAACATTATCACTA+AGG + chr8_2:24904662-24904681 Msa1241350:CDS 30.0%
CTCTCAAACATAAATGCAAA+TGG - chr8_2:24904762-24904781 None:intergenic 30.0%
CATTTGCATTTATGTTTGAG+AGG + chr8_2:24904760-24904779 Msa1241350:CDS 30.0%
TGGTTTCATATTTGTAGGAA+AGG + chr8_2:24904849-24904868 Msa1241350:intron 30.0%
TTCATGCTATATAGAACTTG+TGG - chr8_2:24905097-24905116 None:intergenic 30.0%
!! ATTTTAAGGGTGTGAATGTT+TGG + chr8_2:24905328-24905347 Msa1241350:intron 30.0%
!! GCTTTTAAAGGAAATATGAG+AGG - chr8_2:24905543-24905562 None:intergenic 30.0%
! TTCTAGTGATGAGCTTTTAA+AGG - chr8_2:24905555-24905574 None:intergenic 30.0%
AGGGAAGAAAATAAATTGAG+AGG + chr8_2:24905644-24905663 Msa1241350:intron 30.0%
ACAAAAATGAGCAATTCTCA+AGG - chr8_2:24905770-24905789 None:intergenic 30.0%
! GTTTCATGTGTTTCATTTTG+AGG - chr8_2:24905945-24905964 None:intergenic 30.0%
! TCTGAAAGAGATTGGATTTT+AGG + chr8_2:24905981-24906000 Msa1241350:CDS 30.0%
! CTGAAAGAGATTGGATTTTA+GGG + chr8_2:24905982-24906001 Msa1241350:CDS 30.0%
ATGTCAATACCTATATTCGA+GGG + chr8_2:24906657-24906676 Msa1241350:intron 30.0%
CAACAATGATCATCATAAGT+GGG - chr8_2:24906844-24906863 None:intergenic 30.0%
ATGATCATTGTTGCAATCAT+GGG + chr8_2:24906851-24906870 Msa1241350:CDS 30.0%
! TATCTTCATCGATTATCACA+AGG + chr8_2:24907322-24907341 Msa1241350:intron 30.0%
!! GAATTTGATTTTGGACTATG+TGG + chr8_2:24907517-24907536 Msa1241350:intron 30.0%
TAAGCCTATAACAATCAAGA+TGG - chr8_2:24907560-24907579 None:intergenic 30.0%
TAGGCTTATATTCTGTTCTA+TGG + chr8_2:24907572-24907591 Msa1241350:CDS 30.0%
AGGCTTATATTCTGTTCTAT+GGG + chr8_2:24907573-24907592 Msa1241350:CDS 30.0%
TGATATTCCTTTGCCAATAA+AGG + chr8_2:24907630-24907649 Msa1241350:CDS 30.0%
GATATTCCTTTGCCAATAAA+GGG + chr8_2:24907631-24907650 Msa1241350:CDS 30.0%
TTGGTAAAAAGGGACAAAAT+GGG - chr8_2:24907871-24907890 None:intergenic 30.0%
TATTTGCTCAAACAGTACAA+GGG - chr8_2:24907913-24907932 None:intergenic 30.0%
ATATTTGCTCAAACAGTACA+AGG - chr8_2:24907914-24907933 None:intergenic 30.0%
CAACTAATCCATGTAGAAAT+GGG + chr8_2:24907965-24907984 Msa1241350:three_prime_UTR 30.0%
TTATGATTCCCATTTCTACA+TGG - chr8_2:24907976-24907995 None:intergenic 30.0%
TAACCAAAGAAAAATGGCCA+CGG + chr8_2:24904572-24904591 Msa1241350:exon 35.0%
GTAATGCTTCATGTTCTCAA+AGG - chr8_2:24904610-24904629 None:intergenic 35.0%
TGTTTACAATTTGGCTATGC+TGG + chr8_2:24904642-24904661 Msa1241350:CDS 35.0%
!! ATTTTCATCCTAGCTCTTCT+TGG + chr8_2:24904906-24904925 Msa1241350:CDS 35.0%
!! TTTTCATCCTAGCTCTTCTT+GGG + chr8_2:24904907-24904926 Msa1241350:CDS 35.0%
!! CCTCTAGCTAGTTTAATTTG+CGG + chr8_2:24904937-24904956 Msa1241350:intron 35.0%
AGATGCCAAGCAAAGATATT+GGG + chr8_2:24905834-24905853 Msa1241350:CDS 35.0%
ACTAAGTCTTACTTCACTTG+TGG + chr8_2:24906233-24906252 Msa1241350:CDS 35.0%
ACTTCACTTGTGGTCTTTAT+TGG + chr8_2:24906243-24906262 Msa1241350:CDS 35.0%
!!! AGCTATTGCTGTTACTTTTG+TGG + chr8_2:24906275-24906294 Msa1241350:CDS 35.0%
CATGTCAATACCTATATTCG+AGG + chr8_2:24906656-24906675 Msa1241350:intron 35.0%
!! CTTTTAAGTCCCTCGAATAT+AGG - chr8_2:24906669-24906688 None:intergenic 35.0%
GCAACAATGATCATCATAAG+TGG - chr8_2:24906845-24906864 None:intergenic 35.0%
GATGATCATTGTTGCAATCA+TGG + chr8_2:24906850-24906869 Msa1241350:CDS 35.0%
AATCTGTTCTGCAAGGATAA+AGG - chr8_2:24906879-24906898 None:intergenic 35.0%
CTGCATCTTCCTCAATATAT+TGG + chr8_2:24907034-24907053 Msa1241350:intron 35.0%
GGCTTATATTCTGTTCTATG+GGG + chr8_2:24907574-24907593 Msa1241350:CDS 35.0%
GACACAGATCAAGTAAAACA+TGG + chr8_2:24907691-24907710 Msa1241350:CDS 35.0%
ATGCTTATTGCAACTGAAGA+AGG - chr8_2:24907742-24907761 None:intergenic 35.0%
TTAGTAGTAAGCTCTCTAGT+AGG - chr8_2:24907766-24907785 None:intergenic 35.0%
TGGTAAAAAGGGACAAAATG+GGG - chr8_2:24907870-24907889 None:intergenic 35.0%
CTTGGTAAAAAGGGACAAAA+TGG - chr8_2:24907872-24907891 None:intergenic 35.0%
GGAGGAAAACTTGGTAAAAA+GGG - chr8_2:24907881-24907900 None:intergenic 35.0%
ATTTGCTCAAACAGTACAAG+GGG - chr8_2:24907912-24907931 None:intergenic 35.0%
!! CCATTTCTACATGGATTAGT+TGG - chr8_2:24907967-24907986 None:intergenic 35.0%
CCAACTAATCCATGTAGAAA+TGG + chr8_2:24907964-24907983 Msa1241350:three_prime_UTR 35.0%
!!! TTTCCGTGGCCATTTTTCTT+TGG - chr8_2:24904578-24904597 None:intergenic 40.0%
ACTAAGGTTTCTCTCAACCA+AGG + chr8_2:24904678-24904697 Msa1241350:CDS 40.0%
CCGCAAATTAAACTAGCTAG+AGG - chr8_2:24904940-24904959 None:intergenic 40.0%
TCATTGCACATGAGAAGGTT+GGG - chr8_2:24905241-24905260 None:intergenic 40.0%
AACTGCCATCACAAAAGTCA+TGG - chr8_2:24905279-24905298 None:intergenic 40.0%
!! TTGTGATGGCAGTTTTATGC+AGG + chr8_2:24905285-24905304 Msa1241350:CDS 40.0%
GAGATGCCAAGCAAAGATAT+TGG + chr8_2:24905833-24905852 Msa1241350:CDS 40.0%
CTGTTCCCAATATCTTTGCT+TGG - chr8_2:24905842-24905861 None:intergenic 40.0%
TAAAGGTCCTATTGTGGAGA+TGG + chr8_2:24905899-24905918 Msa1241350:CDS 40.0%
TCCTATTGTGGAGATGGTAT+GGG + chr8_2:24905905-24905924 Msa1241350:CDS 40.0%
ACACATGAAACAACAACCAC+AGG + chr8_2:24905954-24905973 Msa1241350:CDS 40.0%
ATCTCTTTCAGAAGATCCTG+TGG - chr8_2:24905973-24905992 None:intergenic 40.0%
! CAGGATCTTCTGAAAGAGAT+TGG + chr8_2:24905973-24905992 Msa1241350:CDS 40.0%
TTATCATTGCCACCTTTGCT+TGG + chr8_2:24906015-24906034 Msa1241350:CDS 40.0%
TATCATTGCCACCTTTGCTT+GGG + chr8_2:24906016-24906035 Msa1241350:CDS 40.0%
!! TTCTGTATGGAGGATTGGTT+GGG + chr8_2:24906311-24906330 Msa1241350:CDS 40.0%
ATGGAAGATCCTTACAGCAT+AGG - chr8_2:24906358-24906377 None:intergenic 40.0%
TACATAGTATGCCAAGCTTG+AGG - chr8_2:24906771-24906790 None:intergenic 40.0%
AGCTTGGCATACTATGTACA+AGG + chr8_2:24906773-24906792 Msa1241350:CDS 40.0%
GCTTGGCATACTATGTACAA+GGG + chr8_2:24906774-24906793 Msa1241350:CDS 40.0%
!! GATCATCATAAGTGGGCTAA+AGG - chr8_2:24906837-24906856 None:intergenic 40.0%
CAGAGTAAATCTGTTCTGCA+AGG - chr8_2:24906886-24906905 None:intergenic 40.0%
CTTGCAGAACAGATTTACTC+TGG + chr8_2:24906884-24906903 Msa1241350:CDS 40.0%
CAGAACAGATTTACTCTGGA+GGG + chr8_2:24906888-24906907 Msa1241350:CDS 40.0%
! GGTGCCATCTTGATTGTTAT+AGG + chr8_2:24907553-24907572 Msa1241350:CDS 40.0%
CTCATTTGAGCACCCTTTAT+TGG - chr8_2:24907646-24907665 None:intergenic 40.0%
!! ATAAAGGGTGCTCAAATGAG+TGG + chr8_2:24907646-24907665 Msa1241350:CDS 40.0%
GCTCAAATGAGTGGAAATTC+AGG + chr8_2:24907655-24907674 Msa1241350:CDS 40.0%
AAGGGACAAAATGGGGATAA+TGG - chr8_2:24907863-24907882 None:intergenic 40.0%
GGGAGGAAAACTTGGTAAAA+AGG - chr8_2:24907882-24907901 None:intergenic 40.0%
GAGGAAGAACACTTGCAAGA+AGG - chr8_2:24904482-24904501 None:intergenic 45.0%
GATAAACGACGAGGACATAG+TGG - chr8_2:24904710-24904729 None:intergenic 45.0%
TAGAAGCAGTTGCAAAAGCG+TGG - chr8_2:24904734-24904753 None:intergenic 45.0%
AGACTAACCCAAGAAGAGCT+AGG - chr8_2:24904917-24904936 None:intergenic 45.0%
CATTGCACATGAGAAGGTTG+GGG - chr8_2:24905240-24905259 None:intergenic 45.0%
CTCATTGCACATGAGAAGGT+TGG - chr8_2:24905242-24905261 None:intergenic 45.0%
GTTGCTCATTGCACATGAGA+AGG - chr8_2:24905246-24905265 None:intergenic 45.0%
! TCCAGCCATGACTTTTGTGA+TGG + chr8_2:24905271-24905290 Msa1241350:CDS 45.0%
!! GGAACAGTATTGACAGTAGC+TGG + chr8_2:24905855-24905874 Msa1241350:CDS 45.0%
GTCCTATTGTGGAGATGGTA+TGG + chr8_2:24905904-24905923 Msa1241350:CDS 45.0%
AAAGAGTGAAGCCCAAGCAA+AGG - chr8_2:24906030-24906049 None:intergenic 45.0%
CTGAGCATGATCCTTCTGTA+TGG + chr8_2:24906298-24906317 Msa1241350:CDS 45.0%
AGCATGATCCTTCTGTATGG+AGG + chr8_2:24906301-24906320 Msa1241350:CDS 45.0%
GATCCTTCTGTATGGAGGAT+TGG + chr8_2:24906306-24906325 Msa1241350:CDS 45.0%
CAACCAATCCTCCATACAGA+AGG - chr8_2:24906312-24906331 None:intergenic 45.0%
! CTTCTGTATGGAGGATTGGT+TGG + chr8_2:24906310-24906329 Msa1241350:CDS 45.0%
TTGCTTCTGCCTATGCTGTA+AGG + chr8_2:24906346-24906365 Msa1241350:intron 45.0%
! ATGTACAAGGGCTGGTGATT+AGG + chr8_2:24906786-24906805 Msa1241350:CDS 45.0%
CTAAAGGCAGTTGCAAAGAC+AGG - chr8_2:24906821-24906840 None:intergenic 45.0%
GCAGAACAGATTTACTCTGG+AGG + chr8_2:24906887-24906906 Msa1241350:CDS 45.0%
AGTAGGCACAAGAAATCACG+AGG - chr8_2:24907208-24907227 None:intergenic 45.0%
! TGTTCTATGGGGAAAGCACA+AGG + chr8_2:24907585-24907604 Msa1241350:CDS 45.0%
TGAGCACCCTTTATTGGCAA+AGG - chr8_2:24907640-24907659 None:intergenic 45.0%
AAACAGTACAAGGGGTGATG+GGG - chr8_2:24907904-24907923 None:intergenic 45.0%
CAAACAGTACAAGGGGTGAT+GGG - chr8_2:24907905-24907924 None:intergenic 45.0%
TCAAACAGTACAAGGGGTGA+TGG - chr8_2:24907906-24907925 None:intergenic 45.0%
!!! TAATATATTTTATTTTTGTT+AGG + chr8_2:24906736-24906755 Msa1241350:intron 5.0%
!!! AATATATTTTATTTTTGTTA+GGG + chr8_2:24906737-24906756 Msa1241350:intron 5.0%
!!! ATTTCTAATTTTAAATTTAT+AGG + chr8_2:24907159-24907178 Msa1241350:intron 5.0%
GGACATAGTGGCTCATTCCT+TGG - chr8_2:24904698-24904717 None:intergenic 50.0%
GCCATCACAAAAGTCATGGC+TGG - chr8_2:24905275-24905294 None:intergenic 50.0%
GCCCATACCATCTCCACAAT+AGG - chr8_2:24905909-24905928 None:intergenic 50.0%
GGGAATTGTGACCTCAAGCT+TGG + chr8_2:24906757-24906776 Msa1241350:intron 50.0%
GGCATACTATGTACAAGGGC+TGG + chr8_2:24906778-24906797 Msa1241350:CDS 50.0%
! GGGCTGGTGATTAGGAAGAA+AGG + chr8_2:24906794-24906813 Msa1241350:CDS 50.0%
ACTATGTGGGTGCAGTGTGA+TGG + chr8_2:24907531-24907550 Msa1241350:intron 50.0%
CTATGTGGGTGCAGTGTGAT+GGG + chr8_2:24907532-24907551 Msa1241350:intron 50.0%
! AACAGTACAAGGGGTGATGG+GGG - chr8_2:24907903-24907922 None:intergenic 50.0%
AAGCGTGGCGATAAACGACG+AGG - chr8_2:24904719-24904738 None:intergenic 55.0%
GAGTGAAGCCCAAGCAAAGG+TGG - chr8_2:24906027-24906046 None:intergenic 55.0%
! GTGATGGGGGGAGGAAAACT+TGG - chr8_2:24907890-24907909 None:intergenic 55.0%
!! ACAGTACAAGGGGTGATGGG+GGG - chr8_2:24907902-24907921 None:intergenic 55.0%
!! GTACAAGGGGTGATGGGGGG+AGG - chr8_2:24907899-24907918 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 24904464 24908003 24904464 ID=Msa1241350;Name=Msa1241350
chr8_2 mRNA 24904464 24908003 24904464 ID=Msa1241350-mRNA-1;Parent=Msa1241350;Name=Msa1241350-mRNA-1;_AED=0.14;_eAED=0.14;_QI=121|1|1|1|1|1|7|199|400
chr8_2 exon 24904464 24904781 24904464 ID=Msa1241350-mRNA-1:exon:8780;Parent=Msa1241350-mRNA-1
chr8_2 exon 24904866 24904928 24904866 ID=Msa1241350-mRNA-1:exon:8781;Parent=Msa1241350-mRNA-1
chr8_2 exon 24905190 24905306 24905190 ID=Msa1241350-mRNA-1:exon:8782;Parent=Msa1241350-mRNA-1
chr8_2 exon 24905806 24906058 24905806 ID=Msa1241350-mRNA-1:exon:8783;Parent=Msa1241350-mRNA-1
chr8_2 exon 24906201 24906362 24906201 ID=Msa1241350-mRNA-1:exon:8784;Parent=Msa1241350-mRNA-1
chr8_2 exon 24906758 24906909 24906758 ID=Msa1241350-mRNA-1:exon:8785;Parent=Msa1241350-mRNA-1
chr8_2 exon 24907546 24908003 24907546 ID=Msa1241350-mRNA-1:exon:8786;Parent=Msa1241350-mRNA-1
chr8_2 five_prime_UTR 24904464 24904584 24904464 ID=Msa1241350-mRNA-1:five_prime_utr;Parent=Msa1241350-mRNA-1
chr8_2 CDS 24904585 24904781 24904585 ID=Msa1241350-mRNA-1:cds;Parent=Msa1241350-mRNA-1
chr8_2 CDS 24904866 24904928 24904866 ID=Msa1241350-mRNA-1:cds;Parent=Msa1241350-mRNA-1
chr8_2 CDS 24905190 24905306 24905190 ID=Msa1241350-mRNA-1:cds;Parent=Msa1241350-mRNA-1
chr8_2 CDS 24905806 24906058 24905806 ID=Msa1241350-mRNA-1:cds;Parent=Msa1241350-mRNA-1
chr8_2 CDS 24906201 24906362 24906201 ID=Msa1241350-mRNA-1:cds;Parent=Msa1241350-mRNA-1
chr8_2 CDS 24906758 24906909 24906758 ID=Msa1241350-mRNA-1:cds;Parent=Msa1241350-mRNA-1
chr8_2 CDS 24907546 24907804 24907546 ID=Msa1241350-mRNA-1:cds;Parent=Msa1241350-mRNA-1
chr8_2 three_prime_UTR 24907805 24908003 24907805 ID=Msa1241350-mRNA-1:three_prime_utr;Parent=Msa1241350-mRNA-1
Gene Sequence

>Msa1241350

ATGGCCACGGAAAAATCAAATTCCTTTGAGAACATGAAGCATTACACTGCTATGATATGTTTACAATTTGGCTATGCTGGTATGAACATTATCACTAAGGTTTCTCTCAACCAAGGAATGAGCCACTATGTCCTCGTCGTTTATCGCCACGCTTTTGCAACTGCTTCTATAGCTCCATTTGCATTTATGTTTGAGAGGAAAGGTCAACCTAAGATAACATTCCGAATTTTCTTGCAAATTTTCATCCTAGCTCTTCTTGGGCCAGTGATTGATCAAAATTTCTATTATGCTGGGTTGAAGCTCACATCCCCAACCTTCTCATGTGCAATGAGCAACGTGCTTCCAGCCATGACTTTTGTGATGGCAGTTTTATGCAGGATGGAGAAGATAAACATAAAGCAAGTGAGATGCCAAGCAAAGATATTGGGAACAGTATTGACAGTAGCTGGTGCAATGCTAATGACATTATATAAAGGTCCTATTGTGGAGATGGTATGGGCCAAAAATAGACATCCTCAAAATGAAACACATGAAACAACAACCACAGGATCTTCTGAAAGAGATTGGATTTTAGGGTGCACTTTTCTTATCATTGCCACCTTTGCTTGGGCTTCACTCTTTGTTTTGCAAGCAAAAGTTATAGAGACGTACAAGCATCATCAACTAAGTCTTACTTCACTTGTGGTCTTTATTGGTACTCTTCAAGCTATTGCTGTTACTTTTGTGGCTGAGCATGATCCTTCTGTATGGAGGATTGGTTGGGATATGAGTTTACTTGCTTCTGCCTATGCTGGAATTGTGACCTCAAGCTTGGCATACTATGTACAAGGGCTGGTGATTAGGAAGAAAGGACCTGTCTTTGCAACTGCCTTTAGCCCACTTATGATGATCATTGTTGCAATCATGGGATCCTTTATCCTTGCAGAACAGATTTACTCTGGAGGTGTGATGGGTGCCATCTTGATTGTTATAGGCTTATATTCTGTTCTATGGGGAAAGCACAAGGAAGAAATAGAGAGAAAAGTAGATGATATTCCTTTGCCAATAAAGGGTGCTCAAATGAGTGGAAATTCAGGTCTAGTGATTGATGACACAGATCAAGTAAAACATGGTCAAGTTGAAGATACTAACAACATGCCTTCTTCAGTTGCAATAAGCATTCCTACTAGAGAGCTTACTACTAATAATGTTAACCAGCAATAA
Protein sequence

>Msa1241350

MATEKSNSFENMKHYTAMICLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATASIAPFAFMFERKGQPKITFRIFLQIFILALLGPVIDQNFYYAGLKLTSPTFSCAMSNVLPAMTFVMAVLCRMEKINIKQVRCQAKILGTVLTVAGAMLMTLYKGPIVEMVWAKNRHPQNETHETTTTGSSERDWILGCTFLIIATFAWASLFVLQAKVIETYKHHQLSLTSLVVFIGTLQAIAVTFVAEHDPSVWRIGWDMSLLASAYAGIVTSSLAYYVQGLVIRKKGPVFATAFSPLMMIIVAIMGSFILAEQIYSGGVMGAILIVIGLYSVLWGKHKEEIERKVDDIPLPIKGAQMSGNSGLVIDDTDQVKHGQVEDTNNMPSSVAISIPTRELTTNNVNQQ*