AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1120320


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1120320 MtrunA17_Chr7g0251381 98.235 340 6 0 1 340 1 340 0.0 688
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1120320 AT1G66680.1 68.436 358 95 3 1 340 1 358 1.10e-171 481

Find 116 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCATGAGTTTAGGTCTT+TGG 0.192323 7_3:+69637818 Msa1120320:three_prime_UTR
CATGACTAACATATTGAAAT+AGG 0.192349 7_3:-69637704 None:intergenic
ACCCTTGTTTAGCCAATTCT+TGG 0.227115 7_3:-69635004 None:intergenic
GGTTGAAACTTTCCACTTCT+TGG 0.231499 7_3:-69637617 None:intergenic
TTTCAACTTGTCATGGATAA+AGG 0.269862 7_3:+69636974 Msa1120320:CDS
TGCTGGGATTTCAGAGTTAC+TGG 0.276650 7_3:+69633496 Msa1120320:CDS
CCTAAACTCATGAAGGAAAA+AGG 0.292796 7_3:-69637811 None:intergenic
AAGTTTCCTCCCCTTTCATT+TGG 0.297563 7_3:+69637943 Msa1120320:three_prime_UTR
TCCTTGGCTACCTCAGGTTC+GGG 0.333703 7_3:-69637660 None:intergenic
TTAACATCATCAACGTGATT+TGG 0.344576 7_3:-69634900 None:intergenic
CTCAGGTTCTCTGATTTAAC+TGG 0.345032 7_3:+69635661 Msa1120320:intron
AAAGGGACACTTGATGCTAT+TGG 0.345795 7_3:+69636992 Msa1120320:CDS
AGTTTCCTCCCCTTTCATTT+GGG 0.345851 7_3:+69637944 Msa1120320:three_prime_UTR
ATCCTTGGCTACCTCAGGTT+CGG 0.346206 7_3:-69637661 None:intergenic
TTCCGGCTGCAAACGAATTC+CGG 0.350662 7_3:-69632653 None:intergenic
AGACGCATGTGTATTACTTC+TGG 0.353878 7_3:+69637872 Msa1120320:three_prime_UTR
CTTGTTCCAACTTTGTTTCA+AGG 0.368887 7_3:-69636949 None:intergenic
GAGTTTAGGTCTTTGGTGAA+TGG 0.382761 7_3:+69637825 Msa1120320:three_prime_UTR
CTTGACATTGGGACTGGAAA+TGG 0.388367 7_3:+69634972 Msa1120320:CDS
TGGTTTGCTTCTCCAAGAAT+TGG 0.395304 7_3:+69634992 Msa1120320:CDS
AAGGCTTTGGGCAAGGTTGA+TGG 0.395865 7_3:-69635704 None:intergenic
AGTTTAGGTCTTTGGTGAAT+GGG 0.396722 7_3:+69637826 Msa1120320:three_prime_UTR
ATGACTAACATATTGAAATA+GGG 0.397158 7_3:-69637703 None:intergenic
GTTTCAAGGCTGGTTGCTCC+TGG 0.406301 7_3:+69637206 Msa1120320:CDS
TAAACAAATGTAGTAGTAAA+GGG 0.418838 7_3:+69637994 Msa1120320:three_prime_UTR
TTCAACTTGTCATGGATAAA+GGG 0.421552 7_3:+69636975 Msa1120320:CDS
CATCACGGTTAGCAAGGCTT+TGG 0.423854 7_3:-69635717 None:intergenic
ATCACGGTTAGCAAGGCTTT+GGG 0.424839 7_3:-69635716 None:intergenic
ATAAACAAATGTAGTAGTAA+AGG 0.434046 7_3:+69637993 Msa1120320:three_prime_UTR
TCTTTCTCTTACCTCTTGAC+AGG 0.438190 7_3:-69637031 None:intergenic
AGTAATTACAAATTAACAAT+GGG 0.442639 7_3:+69638063 Msa1120320:three_prime_UTR
TCATCATCCTTGGCTACCTC+AGG 0.447830 7_3:-69637666 None:intergenic
AAATCACGTTGATGATGTTA+AGG 0.448003 7_3:+69634902 Msa1120320:CDS
GTTGGAATGTACTTGACATT+GGG 0.464276 7_3:+69634961 Msa1120320:CDS
ATGGTCATGCTGGTGAAGTT+TGG 0.470442 7_3:+69633559 Msa1120320:CDS
TTGGGATTCTGTTTCAAGGC+TGG 0.471964 7_3:+69637196 Msa1120320:CDS
TACCTCTTGACAGGACCATC+AGG 0.473156 7_3:-69637022 None:intergenic
TGGTACTGATTATAGTGAAC+GGG 0.478126 7_3:+69635681 Msa1120320:CDS
TGAGGCAGTTTCATCAATGC+TGG 0.480765 7_3:+69633479 Msa1120320:CDS
GGACCATGAGTCAGCGGCGA+TGG 0.482287 7_3:-69632743 None:intergenic
CTCCAAGAATTGGCTAAACA+AGG 0.487355 7_3:+69635002 Msa1120320:CDS
AGCTATTCACCCAAATGAAA+GGG 0.489879 7_3:-69637953 None:intergenic
CAAAGCCTTGCTAACCGTGA+TGG 0.494626 7_3:+69635718 Msa1120320:CDS
TGTATTGGGATTCTGTTTCA+AGG 0.498037 7_3:+69637192 Msa1120320:CDS
GAGCTTCAGCGGCGTCCGCA+TGG 0.498625 7_3:-69632807 None:intergenic
ACTACTTTGAACGCAGGAAA+GGG 0.499677 7_3:-69632537 None:intergenic
GTTCCATCGCCGCTGACTCA+TGG 0.501137 7_3:+69632740 Msa1120320:CDS
AATGTAGTAGTAAAGGGAAA+AGG 0.501480 7_3:+69638000 Msa1120320:three_prime_UTR
AGTGGCAACACGGGAGCCTA+CGG 0.508556 7_3:-69637760 None:intergenic
GGCCGGAATTCGTTTGCAGC+CGG 0.509839 7_3:+69632651 Msa1120320:CDS
TCTGCATGATTCATCATCCT+TGG 0.514098 7_3:-69637676 None:intergenic
CGAAACCACCCTCCGATGGC+CGG 0.514310 7_3:+69632634 Msa1120320:exon
ACGTATCCGACATTCATGTT+TGG 0.515694 7_3:+69637732 Msa1120320:CDS
AAAGCCTTGCTAACCGTGAT+GGG 0.519409 7_3:+69635719 Msa1120320:CDS
AGTTGGAATGTACTTGACAT+TGG 0.519442 7_3:+69634960 Msa1120320:CDS
ACAAGTGTTTCAACTTGTCA+TGG 0.520761 7_3:+69636967 Msa1120320:CDS
TGATGTCCTTGAAACAAAGT+TGG 0.520838 7_3:+69636943 Msa1120320:CDS
CAGCTATTCACCCAAATGAA+AGG 0.520895 7_3:-69637954 None:intergenic
CAGTAATTACAAATTAACAA+TGG 0.528924 7_3:+69638062 Msa1120320:three_prime_UTR
TGGTCCATCAAAAGCGAGTA+CGG 0.535490 7_3:+69632760 Msa1120320:CDS
TGATGGAAGTAGTTGCATCT+TGG 0.538960 7_3:+69634838 Msa1120320:CDS
TTTCATGAACATGGTCATGC+TGG 0.539843 7_3:+69633549 Msa1120320:CDS
TGGGGTGCAATTAGCAAAGC+CGG 0.542222 7_3:+69632471 None:intergenic
TACTACTTTGAACGCAGGAA+AGG 0.543131 7_3:-69632538 None:intergenic
TGCAAACGAATTCCGGCCAT+CGG 0.544835 7_3:-69632646 None:intergenic
GGCGATGGAACGGTCGTCGT+CGG 0.546266 7_3:-69632728 None:intergenic
AATGTACTTGACATTGGGAC+TGG 0.547470 7_3:+69634966 Msa1120320:CDS
TTGTGCATTGACATTTCTCA+AGG 0.550839 7_3:+69634870 Msa1120320:CDS
TCAAGGCTGGTTGCTCCTGG+TGG 0.552752 7_3:+69637209 Msa1120320:CDS
GGTTAGCAAGGCTTTGGGCA+AGG 0.554260 7_3:-69635711 None:intergenic
AACGAATTCCGGCCATCGGA+GGG 0.554785 7_3:-69632642 None:intergenic
TATCCGACATTCATGTTTGG+CGG 0.555167 7_3:+69637735 Msa1120320:CDS
GAGGCAGTTTCATCAATGCT+GGG 0.556267 7_3:+69633480 Msa1120320:CDS
CCAAAGACCTAAACTCATGA+AGG 0.556376 7_3:-69637818 None:intergenic
TGACTAACATATTGAAATAG+GGG 0.572139 7_3:-69637702 None:intergenic
AAATGCCACAGTGGCAACAC+GGG 0.573969 7_3:-69637769 None:intergenic
ATGAGTCAGCGGCGATGGAA+CGG 0.575371 7_3:-69632738 None:intergenic
TTCATGTTTGGCGGATCCGT+AGG 0.576747 7_3:+69637744 Msa1120320:CDS
TGATGAAACTGCCTCAGCAT+CGG 0.577552 7_3:-69633472 None:intergenic
ACCTGTAATCTGATGCGGCA+CGG 0.580581 7_3:-69632846 None:intergenic
GAAACCCATCACGGTTAGCA+AGG 0.585736 7_3:-69635723 None:intergenic
GGATGAGTTAGTCCAAGAAG+TGG 0.588080 7_3:+69637605 Msa1120320:CDS
AGTAGTTGCATCTTGGACAA+AGG 0.588242 7_3:+69634845 Msa1120320:CDS
CCCCGAACCTGAGGTAGCCA+AGG 0.591508 7_3:+69637659 Msa1120320:CDS
GCTATTGGATTGCATCCTGA+TGG 0.592164 7_3:+69637007 Msa1120320:CDS
GTAGTAAAGGGAAAAGGACG+AGG 0.592616 7_3:+69638006 Msa1120320:three_prime_UTR
AAACGAATTCCGGCCATCGG+AGG 0.592821 7_3:-69632643 None:intergenic
GATGATGTTAAGGCTGATGC+TGG 0.596248 7_3:+69634912 Msa1120320:CDS
CTGGTACTGATTATAGTGAA+CGG 0.599561 7_3:+69635680 Msa1120320:CDS
GTGGTTTCGTTACTATGCGG+TGG 0.602073 7_3:-69632620 None:intergenic
GTAACGAAACCACCCTCCGA+TGG 0.609274 7_3:+69632630 Msa1120320:exon
GAAATGCCACAGTGGCAACA+CGG 0.613085 7_3:-69637770 None:intergenic
CTTGGCTACCTCAGGTTCGG+GGG 0.614779 7_3:-69637658 None:intergenic
GCTGGGATTTCAGAGTTACT+GGG 0.620796 7_3:+69633497 Msa1120320:CDS
TCGCGCTTGTTGCGAGACGT+CGG 0.621027 7_3:-69632680 None:intergenic
CAAGGATGAATCCGATGCTG+AGG 0.625299 7_3:+69633461 Msa1120320:CDS
GACGTTAGAGAGAGCTTCAG+CGG 0.629096 7_3:-69632818 None:intergenic
TCCAAGAATTGGCTAAACAA+GGG 0.634283 7_3:+69635003 Msa1120320:CDS
ATCCTGATGGTCCTGTCAAG+AGG 0.635234 7_3:+69637020 Msa1120320:CDS
GAATTCCGGCCATCGGAGGG+TGG 0.635739 7_3:-69632639 None:intergenic
ACTAGTACTACTTTGAACGC+AGG 0.636908 7_3:-69632543 None:intergenic
AGGCTCCCGTGTTGCCACTG+TGG 0.638681 7_3:+69637764 Msa1120320:CDS
CACATCATGTAACAGTACAA+AGG 0.646819 7_3:+69637584 Msa1120320:CDS
TGATGTTGGGAAACCCATCA+CGG 0.647034 7_3:-69635732 None:intergenic
TAGGTTCGGAGATAATGTGA+TGG 0.650998 7_3:+69634821 Msa1120320:intron
ACTTTGAACGCAGGAAAGGG+AGG 0.653801 7_3:-69632534 None:intergenic
GTGTGTGTGCAGTTCTGACA+AGG 0.656277 7_3:+69633443 Msa1120320:intron
GATCCGCCAAACATGAATGT+CGG 0.656916 7_3:-69637738 None:intergenic
ATGGAACCTGTAATCTGATG+CGG 0.661523 7_3:-69632851 None:intergenic
GCTATTCACCCAAATGAAAG+GGG 0.664637 7_3:-69637952 None:intergenic
ATTCACCCAAATGAAAGGGG+AGG 0.665174 7_3:-69637949 None:intergenic
TTTGATGGACCATGAGTCAG+CGG 0.681585 7_3:-69632749 None:intergenic
GTACTTACAAGTATTCCACC+AGG 0.693670 7_3:-69637224 None:intergenic
CGATGACGATCAACGCCATG+CGG 0.719168 7_3:+69632792 Msa1120320:CDS
AGGGTGGTTTCGTTACTATG+CGG 0.739620 7_3:-69632623 None:intergenic
TGTAATCTGATGCGGCACGG+AGG 0.752137 7_3:-69632843 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGTTATGTTTTTAATTTT+AGG + chr7_3:69633027-69633046 Msa1120320:intron 10.0%
!!! TTGTTATGTTTTTAATTTTA+GGG + chr7_3:69633028-69633047 Msa1120320:intron 10.0%
!! TTAAAAAAAAAAAATTGACT+AGG + chr7_3:69634014-69634033 Msa1120320:intron 10.0%
!! TAGTAATAATTTAATAAAAG+GGG - chr7_3:69634300-69634319 None:intergenic 10.0%
!! CTAGTAATAATTTAATAAAA+GGG - chr7_3:69634301-69634320 None:intergenic 10.0%
!! TTAAAAATAATGTTAGATTT+AGG + chr7_3:69637353-69637372 Msa1120320:intron 10.0%
!! ACAAATAAGAAAAATATTTA+CGG - chr7_3:69637916-69637935 None:intergenic 10.0%
!!! TGTTATGTTTTTAATTTTAG+GGG + chr7_3:69633029-69633048 Msa1120320:intron 15.0%
!!! AAATTTAGAATTTACGTTTT+AGG + chr7_3:69633187-69633206 Msa1120320:intron 15.0%
!!! AATTTAGAATTTACGTTTTA+GGG + chr7_3:69633188-69633207 Msa1120320:intron 15.0%
!! AGTAATAATTTAATAAAAGG+GGG - chr7_3:69634299-69634318 None:intergenic 15.0%
!! CCTAGTAATAATTTAATAAA+AGG - chr7_3:69634302-69634321 None:intergenic 15.0%
!!! CCTTTTATTAAATTATTACT+AGG + chr7_3:69634299-69634318 Msa1120320:intron 15.0%
!! ATAATGTTATGTTACAAAAA+AGG + chr7_3:69634374-69634393 Msa1120320:intron 15.0%
!! TAATGTTATGTTACAAAAAA+GGG + chr7_3:69634375-69634394 Msa1120320:intron 15.0%
!! GTATACTATAGATATAATTA+TGG - chr7_3:69634495-69634514 None:intergenic 15.0%
!!! TTTCTTCATTTTATATATTC+AGG - chr7_3:69635426-69635445 None:intergenic 15.0%
!!! TATAATATTATTGTTTTCCT+AGG + chr7_3:69635514-69635533 Msa1120320:intron 15.0%
!! ATAAAACATAAGTTTAGAAA+GGG - chr7_3:69636642-69636661 None:intergenic 15.0%
!! TATAAAACATAAGTTTAGAA+AGG - chr7_3:69636643-69636662 None:intergenic 15.0%
!!! TCTAAACTTATGTTTTATAT+TGG + chr7_3:69636644-69636663 Msa1120320:intron 15.0%
!!! ACGTTTATTTAACTATTTTA+AGG + chr7_3:69636916-69636935 Msa1120320:intron 15.0%
!! AGTAATTACAAATTAACAAT+GGG + chr7_3:69638063-69638082 Msa1120320:three_prime_UTR 15.0%
!! GGTTTATATTTGATGTTAAT+TGG + chr7_3:69633127-69633146 Msa1120320:intron 20.0%
!! GATTATTTAACATAAGCAAA+TGG + chr7_3:69634137-69634156 Msa1120320:intron 20.0%
!! AAAACTAAGAAATCTTATGT+GGG - chr7_3:69634546-69634565 None:intergenic 20.0%
!! TAAAACTAAGAAATCTTATG+TGG - chr7_3:69634547-69634566 None:intergenic 20.0%
!!! ATTTGTTTTCTATTTATGCA+GGG - chr7_3:69636360-69636379 None:intergenic 20.0%
!! AAAAGTTAAAACAATGTCAA+AGG - chr7_3:69636730-69636749 None:intergenic 20.0%
!!! TTATTTTCAGAATGATGTAT+TGG + chr7_3:69637177-69637196 Msa1120320:intron 20.0%
!!! TATTTTCAGAATGATGTATT+GGG + chr7_3:69637178-69637197 Msa1120320:intron 20.0%
!! TATAATATTAACTTTGGACA+AGG - chr7_3:69637262-69637281 None:intergenic 20.0%
!! GGACAATATAATATTAACTT+TGG - chr7_3:69637268-69637287 None:intergenic 20.0%
!!! TGACAATATAATATTAGCTT+TGG - chr7_3:69637333-69637352 None:intergenic 20.0%
!! ATTTCTTCTGTAATGAATAA+TGG - chr7_3:69637449-69637468 None:intergenic 20.0%
!! ATGACTAACATATTGAAATA+GGG - chr7_3:69637706-69637725 None:intergenic 20.0%
!! ATAAACAAATGTAGTAGTAA+AGG + chr7_3:69637993-69638012 Msa1120320:three_prime_UTR 20.0%
!! TAAACAAATGTAGTAGTAAA+GGG + chr7_3:69637994-69638013 Msa1120320:three_prime_UTR 20.0%
!! CAGTAATTACAAATTAACAA+TGG + chr7_3:69638062-69638081 Msa1120320:three_prime_UTR 20.0%
! TTTCGCTAAGTAATGATTAA+CGG - chr7_3:69633008-69633027 None:intergenic 25.0%
!!! TTTTAATTTTAGGGGAATTG+AGG + chr7_3:69633037-69633056 Msa1120320:intron 25.0%
!!! TACGTTTTAGGGTTTATAAT+TGG + chr7_3:69633199-69633218 Msa1120320:intron 25.0%
!!! ACGTTTTAGGGTTTATAATT+GGG + chr7_3:69633200-69633219 Msa1120320:intron 25.0%
!! CTTACAAATTTTCATGAACA+TGG + chr7_3:69633540-69633559 Msa1120320:CDS 25.0%
!! TCACTGATCTTTATGATTTT+CGG + chr7_3:69633619-69633638 Msa1120320:intron 25.0%
!! GCTTTTAATCTTCATTTACT+AGG + chr7_3:69633795-69633814 Msa1120320:intron 25.0%
!!! ATTGTTGATAGCAGAAAAAT+AGG - chr7_3:69633968-69633987 None:intergenic 25.0%
!! TATTTTTCTGCTATCAACAA+TGG + chr7_3:69633967-69633986 Msa1120320:intron 25.0%
! ATTTAACATAAGCAAATGGT+TGG + chr7_3:69634141-69634160 Msa1120320:intron 25.0%
!!! TTGATGAATTTTTCAGAATC+AGG + chr7_3:69634204-69634223 Msa1120320:intron 25.0%
! CAACATAACATTATGTTGAA+AGG - chr7_3:69634327-69634346 None:intergenic 25.0%
! TTGAATTTACCTCAATTACA+AGG - chr7_3:69634629-69634648 None:intergenic 25.0%
! TAATTGAGGTAAATTCAAAG+TGG + chr7_3:69634631-69634650 Msa1120320:intron 25.0%
! TGACAAATGAACATTTATTG+TGG + chr7_3:69634685-69634704 Msa1120320:intron 25.0%
!! ATGATAAACTTTTGTCTAGT+TGG + chr7_3:69634943-69634962 Msa1120320:CDS 25.0%
! ATCGTATATTACCAACAATA+TGG - chr7_3:69635047-69635066 None:intergenic 25.0%
!!! TTGGACATAAATTTTAGTGT+AGG - chr7_3:69635116-69635135 None:intergenic 25.0%
! CATACCAAAAATTTGATGTT+GGG - chr7_3:69635748-69635767 None:intergenic 25.0%
! ACATACCAAAAATTTGATGT+TGG - chr7_3:69635749-69635768 None:intergenic 25.0%
!!! ACCTTTTTGTTTTGTTTTTG+CGG + chr7_3:69635961-69635980 Msa1120320:intron 25.0%
! TAAGATCATTGGCATATATT+TGG + chr7_3:69636094-69636113 Msa1120320:intron 25.0%
!!! TATATTTGGTGTAAAAGTCA+TGG + chr7_3:69636108-69636127 Msa1120320:intron 25.0%
!! TGTTTTTCTTCTCTTTTGTT+TGG + chr7_3:69636186-69636205 Msa1120320:intron 25.0%
!!! GTTTTTCTTCTCTTTTGTTT+GGG + chr7_3:69636187-69636206 Msa1120320:intron 25.0%
! AAGATCAATTAAAAAGATCG+AGG - chr7_3:69636225-69636244 None:intergenic 25.0%
!!! GATTTGTTTTCTATTTATGC+AGG - chr7_3:69636361-69636380 None:intergenic 25.0%
!! AATGATATTCAAAAGGCATA+GGG - chr7_3:69636432-69636451 None:intergenic 25.0%
! TAATTGAGAATAGTAACTAC+TGG + chr7_3:69636460-69636479 Msa1120320:intron 25.0%
! AGAAAGAACTATCTTATTCA+TGG + chr7_3:69637047-69637066 Msa1120320:intron 25.0%
! TGGGAAATAAATGAATAACA+TGG - chr7_3:69637113-69637132 None:intergenic 25.0%
! TTATTCATTTATTTCCCACT+TGG + chr7_3:69637115-69637134 Msa1120320:intron 25.0%
!!! TATAATATTAGCTTTGGACA+AGG - chr7_3:69637327-69637346 None:intergenic 25.0%
!! CTTTCCCTTTTTATTATGTA+AGG + chr7_3:69637557-69637576 Msa1120320:intron 25.0%
! ACCACCTTACATAATAAAAA+GGG - chr7_3:69637564-69637583 None:intergenic 25.0%
! TGACTAACATATTGAAATAG+GGG - chr7_3:69637705-69637724 None:intergenic 25.0%
! CATGACTAACATATTGAAAT+AGG - chr7_3:69637707-69637726 None:intergenic 25.0%
CGCAAATTTCTTCAATTCAT+CGG - chr7_3:69632895-69632914 None:intergenic 30.0%
! TTGTTGTTGTTAATAGATCG+TGG + chr7_3:69632950-69632969 Msa1120320:intron 30.0%
!! TGATGTTAATTGGTAATGTG+TGG + chr7_3:69633137-69633156 Msa1120320:intron 30.0%
!! AAGTTTTAGCATACAAACAC+CGG - chr7_3:69633228-69633247 None:intergenic 30.0%
ATCAATGATATCACTTTCCT+AGG - chr7_3:69633763-69633782 None:intergenic 30.0%
TTGTACTAAATAGCATATCG+CGG - chr7_3:69633881-69633900 None:intergenic 30.0%
TGATAGCAGAAAAATAGGTT+TGG - chr7_3:69633963-69633982 None:intergenic 30.0%
! CAGAAACCATAATTGATAGT+GGG + chr7_3:69634050-69634069 Msa1120320:intron 30.0%
CTATTACCCACTATCAATTA+TGG - chr7_3:69634059-69634078 None:intergenic 30.0%
!!! TGGGTAATAGTTTGTTTTCT+AGG + chr7_3:69634069-69634088 Msa1120320:intron 30.0%
!! TTTGTTTTCTAGGCATTTCT+AGG + chr7_3:69634079-69634098 Msa1120320:intron 30.0%
TCTATAGTATACTCAGTTTG+AGG + chr7_3:69634503-69634522 Msa1120320:intron 30.0%
TTCATTTGTCATCTCTAACA+CGG - chr7_3:69634676-69634695 None:intergenic 30.0%
TGAACATTTATTGTGGATGA+TGG + chr7_3:69634692-69634711 Msa1120320:intron 30.0%
CTGTTATGTTTCATCATTGT+AGG + chr7_3:69634802-69634821 Msa1120320:intron 30.0%
ATGTTTCATCATTGTAGGTT+CGG + chr7_3:69634807-69634826 Msa1120320:intron 30.0%
TTAACATCATCAACGTGATT+TGG - chr7_3:69634903-69634922 None:intergenic 30.0%
!! AAATCACGTTGATGATGTTA+AGG + chr7_3:69634902-69634921 Msa1120320:CDS 30.0%
!! TCACTTTTCATCCATATTGT+TGG + chr7_3:69635033-69635052 Msa1120320:intron 30.0%
ATATACTCTGATAACCAGAA+GGG - chr7_3:69635184-69635203 None:intergenic 30.0%
TATATACTCTGATAACCAGA+AGG - chr7_3:69635185-69635204 None:intergenic 30.0%
TGTATGCACGTATATCTATT+TGG - chr7_3:69635227-69635246 None:intergenic 30.0%
ATTGAAAGATAACTTCACAG+TGG + chr7_3:69635255-69635274 Msa1120320:intron 30.0%
AAGATCTAAAGACTGAACAA+GGG - chr7_3:69635550-69635569 None:intergenic 30.0%
! CTTATTCTGAATACTGATTG+TGG + chr7_3:69635571-69635590 Msa1120320:intron 30.0%
! GTTTCCCAACATCAAATTTT+TGG + chr7_3:69635741-69635760 Msa1120320:CDS 30.0%
TTTCTTCTCATGTAGCTTAA+AGG + chr7_3:69635842-69635861 Msa1120320:intron 30.0%
TGGCATGTTAGACATAATAA+TGG + chr7_3:69635897-69635916 Msa1120320:intron 30.0%
GCAAAAACAAAACAAAAAGG+TGG - chr7_3:69635962-69635981 None:intergenic 30.0%
TTAGGCATATCAGTTAACTT+GGG + chr7_3:69636070-69636089 Msa1120320:intron 30.0%
! TTAACTTGGGATAAGATCAT+TGG + chr7_3:69636083-69636102 Msa1120320:intron 30.0%
AATTAAAAAGATCGAGGAGA+AGG - chr7_3:69636219-69636238 None:intergenic 30.0%
! ATGATATTCAAAAGGCATAG+GGG - chr7_3:69636431-69636450 None:intergenic 30.0%
! GAATGATATTCAAAAGGCAT+AGG - chr7_3:69636433-69636452 None:intergenic 30.0%
GAACGAGAATGATATTCAAA+AGG - chr7_3:69636439-69636458 None:intergenic 30.0%
CTAATATGTATCACAGTATC+AGG - chr7_3:69636549-69636568 None:intergenic 30.0%
CTGATACTGTGATACATATT+AGG + chr7_3:69636547-69636566 Msa1120320:intron 30.0%
CAGTAATATACTACAAAACG+GGG - chr7_3:69636784-69636803 None:intergenic 30.0%
CCAGTAATATACTACAAAAC+GGG - chr7_3:69636785-69636804 None:intergenic 30.0%
GCCAGTAATATACTACAAAA+CGG - chr7_3:69636786-69636805 None:intergenic 30.0%
CATGTTAAGAAACAAGTCAA+AGG - chr7_3:69636841-69636860 None:intergenic 30.0%
TTTCAACTTGTCATGGATAA+AGG + chr7_3:69636974-69636993 Msa1120320:CDS 30.0%
TTCAACTTGTCATGGATAAA+GGG + chr7_3:69636975-69636994 Msa1120320:CDS 30.0%
CTTACAAGTACAAGTTCAAA+AGG - chr7_3:69637289-69637308 None:intergenic 30.0%
ACTGGCAGAAAATTAAAACA+CGG - chr7_3:69637380-69637399 None:intergenic 30.0%
! TAATTTTCTGCCAGTTAGTT+TGG + chr7_3:69637385-69637404 Msa1120320:intron 30.0%
!! AATTTTCTGCCAGTTAGTTT+GGG + chr7_3:69637386-69637405 Msa1120320:intron 30.0%
! AATTTTGCCTATTGCAAAGT+GGG + chr7_3:69637420-69637439 Msa1120320:intron 30.0%
ATAAAAAGGGAAAGTCAGAA+AGG - chr7_3:69637551-69637570 None:intergenic 30.0%
! TCCCTTTTTATTATGTAAGG+TGG + chr7_3:69637560-69637579 Msa1120320:intron 30.0%
GACCACCTTACATAATAAAA+AGG - chr7_3:69637565-69637584 None:intergenic 30.0%
AATGTAGTAGTAAAGGGAAA+AGG + chr7_3:69638000-69638019 Msa1120320:three_prime_UTR 30.0%
ATTACTGCAACAAAAAGAAC+TGG - chr7_3:69638049-69638068 None:intergenic 30.0%
!! TAGTTTTACACGTAACGTAC+CGG - chr7_3:69632493-69632512 None:intergenic 35.0%
! TGGATTCGTGATTTTGCTTA+GGG + chr7_3:69632970-69632989 Msa1120320:intron 35.0%
! TGTTGCGTTTTCGCAATTTA+TGG + chr7_3:69633094-69633113 Msa1120320:intron 35.0%
TAGGGTTTATAATTGGGAAC+CGG + chr7_3:69633206-69633225 Msa1120320:intron 35.0%
GGTGTTTGTATGCTAAAACT+TGG + chr7_3:69633227-69633246 Msa1120320:intron 35.0%
! ATTATTATCTGTGTCGACGT+CGG + chr7_3:69633337-69633356 Msa1120320:intron 35.0%
!!! GGTGCAGTTTTGTTAATTAG+TGG + chr7_3:69633816-69633835 Msa1120320:intron 35.0%
! AACAATGGACAACATTGACT+AGG + chr7_3:69633982-69634001 Msa1120320:intron 35.0%
CCACTATCAATTATGGTTTC+TGG - chr7_3:69634052-69634071 None:intergenic 35.0%
CCAGAAACCATAATTGATAG+TGG + chr7_3:69634049-69634068 Msa1120320:intron 35.0%
CAAAGCTTCAGAATGTACTT+TGG + chr7_3:69634404-69634423 Msa1120320:intron 35.0%
TCAAACTAAGTCTCTGATCT+AGG - chr7_3:69634443-69634462 None:intergenic 35.0%
ATAGTATACTCAGTTTGAGG+AGG + chr7_3:69634506-69634525 Msa1120320:intron 35.0%
TCATTTGTCATCTCTAACAC+GGG - chr7_3:69634675-69634694 None:intergenic 35.0%
! TTGTGCATTGACATTTCTCA+AGG + chr7_3:69634870-69634889 Msa1120320:CDS 35.0%
AGTTGGAATGTACTTGACAT+TGG + chr7_3:69634960-69634979 Msa1120320:CDS 35.0%
GTTGGAATGTACTTGACATT+GGG + chr7_3:69634961-69634980 Msa1120320:CDS 35.0%
TCCAAGAATTGGCTAAACAA+GGG + chr7_3:69635003-69635022 Msa1120320:CDS 35.0%
TTATGTAGTTGTAAGAGACG+TGG - chr7_3:69635147-69635166 None:intergenic 35.0%
AAATACATGAGTTTCCCTTC+TGG + chr7_3:69635167-69635186 Msa1120320:intron 35.0%
TGCATATCAATGAAGCTATG+AGG + chr7_3:69635361-69635380 Msa1120320:intron 35.0%
CAAGATCTAAAGACTGAACA+AGG - chr7_3:69635551-69635570 None:intergenic 35.0%
TTGTGGAGAGATATTTGTAC+TGG + chr7_3:69635588-69635607 Msa1120320:intron 35.0%
CACCTTATTGAACAAACTCT+TGG + chr7_3:69635632-69635651 Msa1120320:intron 35.0%
! TGCCAAGAGTTTGTTCAATA+AGG - chr7_3:69635637-69635656 None:intergenic 35.0%
!! CTGGTACTGATTATAGTGAA+CGG + chr7_3:69635680-69635699 Msa1120320:CDS 35.0%
!! TGGTACTGATTATAGTGAAC+GGG + chr7_3:69635681-69635700 Msa1120320:CDS 35.0%
!!! GTGTTTTGTTTGTTAAAGCG+AGG + chr7_3:69635931-69635950 Msa1120320:intron 35.0%
GCCGCAAAAACAAAACAAAA+AGG - chr7_3:69635965-69635984 None:intergenic 35.0%
! TCTAGATCACTTATGCCTTT+TGG + chr7_3:69636000-69636019 Msa1120320:intron 35.0%
ATTTGGACATTACCACCAAA+AGG - chr7_3:69636018-69636037 None:intergenic 35.0%
CTTGTTAAGACACCTTATTG+TGG - chr7_3:69636045-69636064 None:intergenic 35.0%
GTGTCTTAACAAGTCTTCTT+AGG + chr7_3:69636052-69636071 Msa1120320:intron 35.0%
CTTAGGCATATCAGTTAACT+TGG + chr7_3:69636069-69636088 Msa1120320:intron 35.0%
AAAAGTCATGGCCTTTCTTA+TGG + chr7_3:69636120-69636139 Msa1120320:intron 35.0%
AAAGTCATGGCCTTTCTTAT+GGG + chr7_3:69636121-69636140 Msa1120320:intron 35.0%
AACAAAGCTTCCCATAAGAA+AGG - chr7_3:69636134-69636153 None:intergenic 35.0%
!! TTTCTTCTCTTTTGTTTGGG+AGG + chr7_3:69636190-69636209 Msa1120320:intron 35.0%
!! TTCTTCTCTTTTGTTTGGGA+GGG + chr7_3:69636191-69636210 Msa1120320:intron 35.0%
TCTATTTATGCAGGGTTGTT+CGG - chr7_3:69636352-69636371 None:intergenic 35.0%
ATGCATTCACATCACATTTG+AGG - chr7_3:69636603-69636622 None:intergenic 35.0%
! CCCGTTTTGTAGTATATTAC+TGG + chr7_3:69636782-69636801 Msa1120320:intron 35.0%
TGATGTCCTTGAAACAAAGT+TGG + chr7_3:69636943-69636962 Msa1120320:CDS 35.0%
! CTTGTTCCAACTTTGTTTCA+AGG - chr7_3:69636952-69636971 None:intergenic 35.0%
ACAAGTGTTTCAACTTGTCA+TGG + chr7_3:69636967-69636986 Msa1120320:CDS 35.0%
! TGGCTCTGTCATAATTCTAT+TGG + chr7_3:69637067-69637086 Msa1120320:intron 35.0%
TGGAGAACAAATTACCAAGT+GGG - chr7_3:69637132-69637151 None:intergenic 35.0%
ATGGAGAACAAATTACCAAG+TGG - chr7_3:69637133-69637152 None:intergenic 35.0%
CAAAACAGCAGAAGATTACA+TGG - chr7_3:69637152-69637171 None:intergenic 35.0%
TGTATTGGGATTCTGTTTCA+AGG + chr7_3:69637192-69637211 Msa1120320:CDS 35.0%
! GAATTTTGCCTATTGCAAAG+TGG + chr7_3:69637419-69637438 Msa1120320:intron 35.0%
CACATCATGTAACAGTACAA+AGG + chr7_3:69637584-69637603 Msa1120320:CDS 35.0%
CCTAAACTCATGAAGGAAAA+AGG - chr7_3:69637814-69637833 None:intergenic 35.0%
! CCTTTTTCCTTCATGAGTTT+AGG + chr7_3:69637811-69637830 Msa1120320:three_prime_UTR 35.0%
AGTTTAGGTCTTTGGTGAAT+GGG + chr7_3:69637826-69637845 Msa1120320:three_prime_UTR 35.0%
AGCTATTCACCCAAATGAAA+GGG - chr7_3:69637956-69637975 None:intergenic 35.0%
ACTACTTTGAACGCAGGAAA+GGG - chr7_3:69632540-69632559 None:intergenic 40.0%
TACTACTTTGAACGCAGGAA+AGG - chr7_3:69632541-69632560 None:intergenic 40.0%
ACTAGTACTACTTTGAACGC+AGG - chr7_3:69632546-69632565 None:intergenic 40.0%
ATGGAACCTGTAATCTGATG+CGG - chr7_3:69632854-69632873 None:intergenic 40.0%
! GTGGATTCGTGATTTTGCTT+AGG + chr7_3:69632969-69632988 Msa1120320:intron 40.0%
! TGCGTTTTCGCAATTTATGG+CGG + chr7_3:69633097-69633116 Msa1120320:intron 40.0%
TTCGCAATTTATGGCGGTTA+AGG + chr7_3:69633103-69633122 Msa1120320:intron 40.0%
GTCAATGTGATCACATGTGT+TGG - chr7_3:69633300-69633319 None:intergenic 40.0%
TTTCATGAACATGGTCATGC+TGG + chr7_3:69633549-69633568 Msa1120320:CDS 40.0%
GTAATCTGCAATTCAGACCT+AGG + chr7_3:69633743-69633762 Msa1120320:intron 40.0%
!! TGTTAAAGTGCCGACTTTAG+TGG + chr7_3:69633906-69633925 Msa1120320:intron 40.0%
! TGCTATAGTGCCACTAAAGT+CGG - chr7_3:69633919-69633938 None:intergenic 40.0%
ACTATAGCACTGTTGTGTAG+CGG + chr7_3:69633930-69633949 Msa1120320:intron 40.0%
AGTACGGAATACAACAAGCT+AGG - chr7_3:69634255-69634274 None:intergenic 40.0%
!! AAAGGGGGAGTATCTTTGTT+GGG - chr7_3:69634284-69634303 None:intergenic 40.0%
!! AAAAGGGGGAGTATCTTTGT+TGG - chr7_3:69634285-69634304 None:intergenic 40.0%
AGCGTCAATCCTTGTAATTG+AGG + chr7_3:69634617-69634636 Msa1120320:intron 40.0%
GAGGTAAATTCAAAGTGGTG+TGG + chr7_3:69634636-69634655 Msa1120320:intron 40.0%
AACAATTTCCCACAATGCTG+AGG - chr7_3:69634725-69634744 None:intergenic 40.0%
TCAGCATTGTGGGAAATTGT+TGG + chr7_3:69634724-69634743 Msa1120320:intron 40.0%
TAGGTTCGGAGATAATGTGA+TGG + chr7_3:69634821-69634840 Msa1120320:intron 40.0%
TGATGGAAGTAGTTGCATCT+TGG + chr7_3:69634838-69634857 Msa1120320:CDS 40.0%
AGTAGTTGCATCTTGGACAA+AGG + chr7_3:69634845-69634864 Msa1120320:CDS 40.0%
AATGTACTTGACATTGGGAC+TGG + chr7_3:69634966-69634985 Msa1120320:CDS 40.0%
!! TGGTTTGCTTCTCCAAGAAT+TGG + chr7_3:69634992-69635011 Msa1120320:CDS 40.0%
CTCCAAGAATTGGCTAAACA+AGG + chr7_3:69635002-69635021 Msa1120320:CDS 40.0%
! ACCCTTGTTTAGCCAATTCT+TGG - chr7_3:69635007-69635026 None:intergenic 40.0%
GAATTGGCTAAACAAGGGTA+TGG + chr7_3:69635008-69635027 Msa1120320:intron 40.0%
AAGAGACGTGGAGATAATGT+TGG - chr7_3:69635135-69635154 None:intergenic 40.0%
AGGGAGTTAGCATTAGCATA+TGG + chr7_3:69635335-69635354 Msa1120320:intron 40.0%
ACAAGGGTAGTTTCATTCCT+AGG - chr7_3:69635534-69635553 None:intergenic 40.0%
CTCAGGTTCTCTGATTTAAC+TGG + chr7_3:69635661-69635680 Msa1120320:intron 40.0%
TCATGTAGCTTAAAGGCAGA+AGG + chr7_3:69635849-69635868 Msa1120320:intron 40.0%
ACTAAACAAGCTCAGATACG+GGG - chr7_3:69635878-69635897 None:intergenic 40.0%
CACTAAACAAGCTCAGATAC+GGG - chr7_3:69635879-69635898 None:intergenic 40.0%
CCACTAAACAAGCTCAGATA+CGG - chr7_3:69635880-69635899 None:intergenic 40.0%
! AGATCACTTATGCCTTTTGG+TGG + chr7_3:69636003-69636022 Msa1120320:intron 40.0%
GTCCAAATTGTGCCACAATA+AGG + chr7_3:69636030-69636049 Msa1120320:intron 40.0%
CACCTTATTGTGGCACAATT+TGG - chr7_3:69636035-69636054 None:intergenic 40.0%
! TATTCAAAAGGCATAGGGGT+TGG - chr7_3:69636427-69636446 None:intergenic 40.0%
TAACTATGTCACCTGCTTCA+TGG + chr7_3:69636495-69636514 Msa1120320:intron 40.0%
AACTATGTCACCTGCTTCAT+GGG + chr7_3:69636496-69636515 Msa1120320:intron 40.0%
! TTCACATCACATTTGAGGCA+AGG - chr7_3:69636598-69636617 None:intergenic 40.0%
ACTACAAAACGGGGAACAAA+AGG - chr7_3:69636775-69636794 None:intergenic 40.0%
AAAGGGACACTTGATGCTAT+TGG + chr7_3:69636992-69637011 Msa1120320:CDS 40.0%
TCTTTCTCTTACCTCTTGAC+AGG - chr7_3:69637034-69637053 None:intergenic 40.0%
GTACTTACAAGTATTCCACC+AGG - chr7_3:69637227-69637246 None:intergenic 40.0%
GGTTGAAACTTTCCACTTCT+TGG - chr7_3:69637620-69637639 None:intergenic 40.0%
!!! GGGAAGTAGCACTTTTTCTT+TGG - chr7_3:69637641-69637660 None:intergenic 40.0%
TCTGCATGATTCATCATCCT+TGG - chr7_3:69637679-69637698 None:intergenic 40.0%
ACGTATCCGACATTCATGTT+TGG + chr7_3:69637732-69637751 Msa1120320:CDS 40.0%
TATCCGACATTCATGTTTGG+CGG + chr7_3:69637735-69637754 Msa1120320:CDS 40.0%
! TTTTCGAAGAAATGCCACAG+TGG - chr7_3:69637781-69637800 None:intergenic 40.0%
ACTCATGAAGGAAAAAGGAC+AGG - chr7_3:69637809-69637828 None:intergenic 40.0%
CCAAAGACCTAAACTCATGA+AGG - chr7_3:69637821-69637840 None:intergenic 40.0%
CCTTCATGAGTTTAGGTCTT+TGG + chr7_3:69637818-69637837 Msa1120320:three_prime_UTR 40.0%
GAGTTTAGGTCTTTGGTGAA+TGG + chr7_3:69637825-69637844 Msa1120320:three_prime_UTR 40.0%
AGACGCATGTGTATTACTTC+TGG + chr7_3:69637872-69637891 Msa1120320:three_prime_UTR 40.0%
AAGTTTCCTCCCCTTTCATT+TGG + chr7_3:69637943-69637962 Msa1120320:three_prime_UTR 40.0%
AGTTTCCTCCCCTTTCATTT+GGG + chr7_3:69637944-69637963 Msa1120320:three_prime_UTR 40.0%
GCTATTCACCCAAATGAAAG+GGG - chr7_3:69637955-69637974 None:intergenic 40.0%
CAGCTATTCACCCAAATGAA+AGG - chr7_3:69637957-69637976 None:intergenic 40.0%
AGGGTGGTTTCGTTACTATG+CGG - chr7_3:69632626-69632645 None:intergenic 45.0%
! TTTGATGGACCATGAGTCAG+CGG - chr7_3:69632752-69632771 None:intergenic 45.0%
TGGTCCATCAAAAGCGAGTA+CGG + chr7_3:69632760-69632779 Msa1120320:CDS 45.0%
CTTCAATTCATCGGAGAGAG+AGG - chr7_3:69632886-69632905 None:intergenic 45.0%
GCAATTTATGGCGGTTAAGG+TGG + chr7_3:69633106-69633125 Msa1120320:intron 45.0%
CAATCCAAGCCTATGAAGCA+CGG - chr7_3:69633384-69633403 None:intergenic 45.0%
TGATGAAACTGCCTCAGCAT+CGG - chr7_3:69633475-69633494 None:intergenic 45.0%
TGAGGCAGTTTCATCAATGC+TGG + chr7_3:69633479-69633498 Msa1120320:CDS 45.0%
GAGGCAGTTTCATCAATGCT+GGG + chr7_3:69633480-69633499 Msa1120320:CDS 45.0%
TGCTGGGATTTCAGAGTTAC+TGG + chr7_3:69633496-69633515 Msa1120320:CDS 45.0%
GCTGGGATTTCAGAGTTACT+GGG + chr7_3:69633497-69633516 Msa1120320:CDS 45.0%
ATGGTCATGCTGGTGAAGTT+TGG + chr7_3:69633559-69633578 Msa1120320:CDS 45.0%
TTAGTGGCGCTATTGCATAG+TGG + chr7_3:69633832-69633851 Msa1120320:intron 45.0%
AGCATATCGCGGAACAATAG+AGG - chr7_3:69633870-69633889 None:intergenic 45.0%
CTTTGTTGGGGAAGTGAGTA+CGG - chr7_3:69634271-69634290 None:intergenic 45.0%
!! AAGGGGGAGTATCTTTGTTG+GGG - chr7_3:69634283-69634302 None:intergenic 45.0%
TCTCTGATCTAGGCAAAGCA+AGG - chr7_3:69634433-69634452 None:intergenic 45.0%
TTGAGGAGGATGTGAACTTC+AGG + chr7_3:69634520-69634539 Msa1120320:intron 45.0%
GTGATGAACCTCAGCATTGT+GGG + chr7_3:69634714-69634733 Msa1120320:intron 45.0%
GATGATGTTAAGGCTGATGC+TGG + chr7_3:69634912-69634931 Msa1120320:CDS 45.0%
CTTGACATTGGGACTGGAAA+TGG + chr7_3:69634972-69634991 Msa1120320:CDS 45.0%
ATCACGGTTAGCAAGGCTTT+GGG - chr7_3:69635719-69635738 None:intergenic 45.0%
AAAGCCTTGCTAACCGTGAT+GGG + chr7_3:69635719-69635738 Msa1120320:CDS 45.0%
TGATGTTGGGAAACCCATCA+CGG - chr7_3:69635735-69635754 None:intergenic 45.0%
TTTCAGAGTCTCTGTGTGTG+TGG + chr7_3:69635774-69635793 Msa1120320:intron 45.0%
! CCGTATCTGAGCTTGTTTAG+TGG + chr7_3:69635877-69635896 Msa1120320:intron 45.0%
! GCAAGGTTCATTTTGAGCCT+GGG - chr7_3:69636581-69636600 None:intergenic 45.0%
GCTATTGGATTGCATCCTGA+TGG + chr7_3:69637007-69637026 Msa1120320:CDS 45.0%
TTGGGATTCTGTTTCAAGGC+TGG + chr7_3:69637196-69637215 Msa1120320:CDS 45.0%
ATGGACTCCCACTTTGCAAT+AGG - chr7_3:69637430-69637449 None:intergenic 45.0%
TGTCATGAGCACAGCAACAT+GGG - chr7_3:69637496-69637515 None:intergenic 45.0%
ATGTCATGAGCACAGCAACA+TGG - chr7_3:69637497-69637516 None:intergenic 45.0%
GGATGAGTTAGTCCAAGAAG+TGG + chr7_3:69637605-69637624 Msa1120320:CDS 45.0%
GATCCGCCAAACATGAATGT+CGG - chr7_3:69637741-69637760 None:intergenic 45.0%
ATTCACCCAAATGAAAGGGG+AGG - chr7_3:69637952-69637971 None:intergenic 45.0%
GTAGTAAAGGGAAAAGGACG+AGG + chr7_3:69638006-69638025 Msa1120320:three_prime_UTR 45.0%
!!! ATGAATTTTTTAATTATATA+AGG + chr7_3:69635315-69635334 Msa1120320:intron 5.0%
!!! TGAATTTTTTAATTATATAA+GGG + chr7_3:69635316-69635335 Msa1120320:intron 5.0%
!! ATAATATTATATATTTATGA+AGG - chr7_3:69635505-69635524 None:intergenic 5.0%
ACTTTGAACGCAGGAAAGGG+AGG - chr7_3:69632537-69632556 None:intergenic 50.0%
GTGGTTTCGTTACTATGCGG+TGG - chr7_3:69632623-69632642 None:intergenic 50.0%
TGCAAACGAATTCCGGCCAT+CGG - chr7_3:69632649-69632668 None:intergenic 50.0%
TTCCGGCTGCAAACGAATTC+CGG - chr7_3:69632656-69632675 None:intergenic 50.0%
GACGTTAGAGAGAGCTTCAG+CGG - chr7_3:69632821-69632840 None:intergenic 50.0%
ACCTGTAATCTGATGCGGCA+CGG - chr7_3:69632849-69632868 None:intergenic 50.0%
GAGAGAGAGGTGATGAGGAA+TGG - chr7_3:69632873-69632892 None:intergenic 50.0%
!! CACATGTGTTGGTGTCGTGT+CGG - chr7_3:69633289-69633308 None:intergenic 50.0%
! GTGTGTGTGCAGTTCTGACA+AGG + chr7_3:69633443-69633462 Msa1120320:intron 50.0%
CAAGGATGAATCCGATGCTG+AGG + chr7_3:69633461-69633480 Msa1120320:CDS 50.0%
GGTGATGAACCTCAGCATTG+TGG + chr7_3:69634713-69634732 Msa1120320:intron 50.0%
CAAACTCTTGGCATCTGCTC+AGG + chr7_3:69635644-69635663 Msa1120320:intron 50.0%
!! AAGGCTTTGGGCAAGGTTGA+TGG - chr7_3:69635707-69635726 None:intergenic 50.0%
CATCACGGTTAGCAAGGCTT+TGG - chr7_3:69635720-69635739 None:intergenic 50.0%
CAAAGCCTTGCTAACCGTGA+TGG + chr7_3:69635718-69635737 Msa1120320:CDS 50.0%
GAAACCCATCACGGTTAGCA+AGG - chr7_3:69635726-69635745 None:intergenic 50.0%
! GTATCAGGTTGCATCATGCC+TGG - chr7_3:69636534-69636553 None:intergenic 50.0%
! GTTCATTTTGAGCCTGGGAG+AGG - chr7_3:69636576-69636595 None:intergenic 50.0%
! GGCAAGGTTCATTTTGAGCC+TGG - chr7_3:69636582-69636601 None:intergenic 50.0%
ATCCTGATGGTCCTGTCAAG+AGG + chr7_3:69637020-69637039 Msa1120320:CDS 50.0%
TACCTCTTGACAGGACCATC+AGG - chr7_3:69637025-69637044 None:intergenic 50.0%
TGTCACGAGCCCAAACTAAC+TGG - chr7_3:69637398-69637417 None:intergenic 50.0%
TGAGCACAGCAACATGGGAA+AGG - chr7_3:69637491-69637510 None:intergenic 50.0%
ATCCTTGGCTACCTCAGGTT+CGG - chr7_3:69637664-69637683 None:intergenic 50.0%
TCATCATCCTTGGCTACCTC+AGG - chr7_3:69637669-69637688 None:intergenic 50.0%
! TTCATGTTTGGCGGATCCGT+AGG + chr7_3:69637744-69637763 Msa1120320:CDS 50.0%
AAATGCCACAGTGGCAACAC+GGG - chr7_3:69637772-69637791 None:intergenic 50.0%
GAAATGCCACAGTGGCAACA+CGG - chr7_3:69637773-69637792 None:intergenic 50.0%
GTAACGAAACCACCCTCCGA+TGG + chr7_3:69632630-69632649 Msa1120320:exon 55.0%
AACGAATTCCGGCCATCGGA+GGG - chr7_3:69632645-69632664 None:intergenic 55.0%
AAACGAATTCCGGCCATCGG+AGG - chr7_3:69632646-69632665 None:intergenic 55.0%
ATGAGTCAGCGGCGATGGAA+CGG - chr7_3:69632741-69632760 None:intergenic 55.0%
!! GCTGCCGTACTCGCTTTTGA+TGG - chr7_3:69632767-69632786 None:intergenic 55.0%
CGATGACGATCAACGCCATG+CGG + chr7_3:69632792-69632811 Msa1120320:CDS 55.0%
TGTAATCTGATGCGGCACGG+AGG - chr7_3:69632846-69632865 None:intergenic 55.0%
TCCGTGCCGCATCAGATTAC+AGG + chr7_3:69632845-69632864 Msa1120320:CDS 55.0%
CATCGGAGAGAGAGGTGATG+AGG - chr7_3:69632878-69632897 None:intergenic 55.0%
! GTCGGTGTTCGTGTCATGTC+CGG + chr7_3:69633355-69633374 Msa1120320:intron 55.0%
AGCCTATGAAGCACGGACAC+CGG - chr7_3:69633377-69633396 None:intergenic 55.0%
GTGTCCGTGCTTCATAGGCT+TGG + chr7_3:69633377-69633396 Msa1120320:intron 55.0%
!! GGTTAGCAAGGCTTTGGGCA+AGG - chr7_3:69635714-69635733 None:intergenic 55.0%
!! GTGCTGCTTTCCCATGAAGC+AGG - chr7_3:69636509-69636528 None:intergenic 55.0%
CATATTAGGCTGCCTCTCCC+AGG + chr7_3:69636561-69636580 Msa1120320:intron 55.0%
! GTTTCAAGGCTGGTTGCTCC+TGG + chr7_3:69637206-69637225 Msa1120320:CDS 55.0%
TCCTTGGCTACCTCAGGTTC+GGG - chr7_3:69637663-69637682 None:intergenic 55.0%
GGCCGGAATTCGTTTGCAGC+CGG + chr7_3:69632651-69632670 Msa1120320:CDS 60.0%
TGCGAGACGTCGGAGTCTTC+CGG - chr7_3:69632673-69632692 None:intergenic 60.0%
! TCGCGCTTGTTGCGAGACGT+CGG - chr7_3:69632683-69632702 None:intergenic 60.0%
!! GTTCCATCGCCGCTGACTCA+TGG + chr7_3:69632740-69632759 Msa1120320:CDS 60.0%
GTCCGGTGTCCGTGCTTCAT+AGG + chr7_3:69633372-69633391 Msa1120320:intron 60.0%
CATGGGAAAGCAGCACTGCC+AGG + chr7_3:69636513-69636532 Msa1120320:intron 60.0%
! TCAAGGCTGGTTGCTCCTGG+TGG + chr7_3:69637209-69637228 Msa1120320:CDS 60.0%
! TGCTACTTCCCCCGAACCTG+AGG + chr7_3:69637650-69637669 Msa1120320:CDS 60.0%
CTTGGCTACCTCAGGTTCGG+GGG - chr7_3:69637661-69637680 None:intergenic 60.0%
CCTTGGCTACCTCAGGTTCG+GGG - chr7_3:69637662-69637681 None:intergenic 60.0%
AGTGGCAACACGGGAGCCTA+CGG - chr7_3:69637763-69637782 None:intergenic 60.0%
CGAAACCACCCTCCGATGGC+CGG + chr7_3:69632634-69632653 Msa1120320:exon 65.0%
GAATTCCGGCCATCGGAGGG+TGG - chr7_3:69632642-69632661 None:intergenic 65.0%
GGCGATGGAACGGTCGTCGT+CGG - chr7_3:69632731-69632750 None:intergenic 65.0%
GGACCATGAGTCAGCGGCGA+TGG - chr7_3:69632746-69632765 None:intergenic 65.0%
CCCCGAACCTGAGGTAGCCA+AGG + chr7_3:69637659-69637678 Msa1120320:CDS 65.0%
AGGCTCCCGTGTTGCCACTG+TGG + chr7_3:69637764-69637783 Msa1120320:CDS 65.0%
GAGCTTCAGCGGCGTCCGCA+TGG - chr7_3:69632810-69632829 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 69632476 69638122 69632476 ID=Msa1120320;Name=Msa1120320
chr7_3 mRNA 69632476 69638122 69632476 ID=Msa1120320-mRNA-1;Parent=Msa1120320;Name=Msa1120320-mRNA-1;_AED=0.01;_eAED=0.01;_QI=173|1|1|1|1|1|7|319|340
chr7_3 exon 69632476 69632866 69632476 ID=Msa1120320-mRNA-1:exon:17624;Parent=Msa1120320-mRNA-1
chr7_3 exon 69633455 69633580 69633455 ID=Msa1120320-mRNA-1:exon:17625;Parent=Msa1120320-mRNA-1
chr7_3 exon 69634824 69635024 69634824 ID=Msa1120320-mRNA-1:exon:17626;Parent=Msa1120320-mRNA-1
chr7_3 exon 69635666 69635762 69635666 ID=Msa1120320-mRNA-1:exon:17627;Parent=Msa1120320-mRNA-1
chr7_3 exon 69636938 69637041 69636938 ID=Msa1120320-mRNA-1:exon:17628;Parent=Msa1120320-mRNA-1
chr7_3 exon 69637187 69637238 69637187 ID=Msa1120320-mRNA-1:exon:17629;Parent=Msa1120320-mRNA-1
chr7_3 exon 69637579 69638122 69637579 ID=Msa1120320-mRNA-1:exon:17630;Parent=Msa1120320-mRNA-1
chr7_3 five_prime_UTR 69632476 69632648 69632476 ID=Msa1120320-mRNA-1:five_prime_utr;Parent=Msa1120320-mRNA-1
chr7_3 CDS 69632649 69632866 69632649 ID=Msa1120320-mRNA-1:cds;Parent=Msa1120320-mRNA-1
chr7_3 CDS 69633455 69633580 69633455 ID=Msa1120320-mRNA-1:cds;Parent=Msa1120320-mRNA-1
chr7_3 CDS 69634824 69635024 69634824 ID=Msa1120320-mRNA-1:cds;Parent=Msa1120320-mRNA-1
chr7_3 CDS 69635666 69635762 69635666 ID=Msa1120320-mRNA-1:cds;Parent=Msa1120320-mRNA-1
chr7_3 CDS 69636938 69637041 69636938 ID=Msa1120320-mRNA-1:cds;Parent=Msa1120320-mRNA-1
chr7_3 CDS 69637187 69637238 69637187 ID=Msa1120320-mRNA-1:cds;Parent=Msa1120320-mRNA-1
chr7_3 CDS 69637579 69637803 69637579 ID=Msa1120320-mRNA-1:cds;Parent=Msa1120320-mRNA-1
chr7_3 three_prime_UTR 69637804 69638122 69637804 ID=Msa1120320-mRNA-1:three_prime_utr;Parent=Msa1120320-mRNA-1
Gene Sequence

>Msa1120320

ATGGCCGGAATTCGTTTGCAGCCGGAAGACTCCGACGTCTCGCAACAAGCGCGAGCTGTTGCTCTCATCGATCTCGTCTCCGACGACGACCGTTCCATCGCCGCTGACTCATGGTCCATCAAAAGCGAGTACGGCAGCACTCTCGATGACGATCAACGCCATGCGGACGCCGCTGAAGCTCTCTCTAACGTCAACCTCCGTGCCGCATCAGATTACAGTTCTGACAAGGATGAATCCGATGCTGAGGCAGTTTCATCAATGCTGGGATTTCAGAGTTACTGGGATGCTGCATATACAGATGAGCTTACAAATTTTCATGAACATGGTCATGCTGGTGAAGTTTGGTTCGGAGATAATGTGATGGAAGTAGTTGCATCTTGGACAAAGGCATTGTGCATTGACATTTCTCAAGGTCGCATACCAAATCACGTTGATGATGTTAAGGCTGATGCTGGTGAGCTATATGATAAACTTTTGTCTAGTTGGAATGTACTTGACATTGGGACTGGAAATGGTTTGCTTCTCCAAGAATTGGCTAAACAAGGGTTCTCTGATTTAACTGGTACTGATTATAGTGAACGGGCCATCAACCTTGCCCAAAGCCTTGCTAACCGTGATGGGTTTCCCAACATCAAATTTTTGGTTGATGATGTCCTTGAAACAAAGTTGGAACAAGTGTTTCAACTTGTCATGGATAAAGGGACACTTGATGCTATTGGATTGCATCCTGATGGTCCTGTCAAGAGAATGATGTATTGGGATTCTGTTTCAAGGCTGGTTGCTCCTGGTGGAATACTTGTGGTCACATCATGTAACAGTACAAAGGATGAGTTAGTCCAAGAAGTGGAAAGTTTCAACCAAAGAAAAAGTGCTACTTCCCCCGAACCTGAGGTAGCCAAGGATGATGAATCATGCAGAGATCCCCTATTTCAATATGTTAGTCATGTACGCACGTATCCGACATTCATGTTTGGCGGATCCGTAGGCTCCCGTGTTGCCACTGTGGCATTTCTTCGAAAATGA

Protein sequence

>Msa1120320

MAGIRLQPEDSDVSQQARAVALIDLVSDDDRSIAADSWSIKSEYGSTLDDDQRHADAAEALSNVNLRAASDYSSDKDESDAEAVSSMLGFQSYWDAAYTDELTNFHEHGHAGEVWFGDNVMEVVASWTKALCIDISQGRIPNHVDDVKADAGELYDKLLSSWNVLDIGTGNGLLLQELAKQGFSDLTGTDYSERAINLAQSLANRDGFPNIKFLVDDVLETKLEQVFQLVMDKGTLDAIGLHPDGPVKRMMYWDSVSRLVAPGGILVVTSCNSTKDELVQEVESFNQRKSATSPEPEVAKDDESCRDPLFQYVSHVRTYPTFMFGGSVGSRVATVAFLRK*