AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0576640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0576640 MtrunA17_Chr8g0390751 88.941 425 13 5 1 402 1 414 0.0 752
Msa0576640 MtrunA17_Chr6g0484571 42.819 376 168 5 44 381 44 410 4.67e-99 301
Msa0576640 MtrunA17_Chr1g0148921 44.589 231 96 3 44 242 159 389 1.75e-54 193
Msa0576640 MtrunA17_Chr1g0148921 48.182 110 51 1 271 380 722 825 1.40e-23 103
Msa0576640 MtrunA17_Chr1g0175941 27.763 371 176 14 50 378 462 782 9.14e-21 94.7
Msa0576640 MtrunA17_Chr1g0176001 26.343 391 185 13 50 378 144 493 1.11e-20 94.0
Msa0576640 MtrunA17_Chr1g0175921 26.343 391 185 13 50 378 234 583 1.88e-20 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0576640 AT3G18500.1 55.780 346 139 5 39 380 87 422 5.40e-133 388
Msa0576640 AT3G18500.4 52.717 368 135 6 39 380 87 441 2.84e-128 377
Msa0576640 AT3G18500.2 52.446 368 139 6 39 380 87 444 6.91e-128 376
Msa0576640 AT3G18500.3 52.446 368 140 6 39 380 87 445 9.68e-128 376
Msa0576640 AT1G73875.1 42.932 382 177 5 34 380 74 449 1.84e-105 319
Msa0576640 AT1G73875.3 47.348 264 120 4 130 380 14 271 6.95e-79 244
Msa0576640 AT1G73875.2 40.764 314 149 4 34 312 74 385 2.96e-78 247
Msa0576640 AT5G11350.5 40.969 227 96 3 54 242 17 243 6.13e-50 177
Msa0576640 AT5G11350.5 37.430 179 97 3 203 380 421 585 1.14e-23 103
Msa0576640 AT5G11350.3 39.662 237 105 3 44 242 167 403 1.47e-48 175
Msa0576640 AT5G11350.3 36.496 137 72 3 203 338 581 703 5.51e-14 74.3
Msa0576640 AT5G11350.2 39.662 237 105 3 44 242 167 403 1.63e-48 176
Msa0576640 AT5G11350.2 34.503 171 97 3 203 372 581 737 7.13e-17 83.2
Msa0576640 AT5G11350.4 39.662 237 105 3 44 242 168 404 1.78e-48 176
Msa0576640 AT5G11350.4 37.430 179 97 3 203 380 582 746 1.45e-23 103
Msa0576640 AT5G11350.1 39.662 237 105 3 44 242 167 403 2.02e-48 176
Msa0576640 AT5G11350.1 37.430 179 97 3 203 380 581 745 1.51e-23 103
Msa0576640 AT3G58580.1 24.808 391 193 13 51 378 242 594 6.17e-18 86.3

Find 106 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTATATTCAATTCAGATTA+AGG 0.201263 4_1:-80697261 Msa0576640:three_prime_UTR
CTATGTCTGTAGATTTATTA+TGG 0.216062 4_1:+80697428 None:intergenic
TACGAACTATTCAGCTTTAA+TGG 0.216480 4_1:+80697986 None:intergenic
TCCTATCACTCAAAGTTTCT+TGG 0.259530 4_1:-80697799 Msa0576640:CDS
TTGGTACTGTAGATTATTTA+TGG 0.265883 4_1:-80697780 Msa0576640:intron
ACTTGTAAGCAGATAATATC+AGG 0.274071 4_1:+80701170 None:intergenic
AATTTAACTTCTCCCCTGTT+TGG 0.275296 4_1:+80699428 None:intergenic
CTGACGGTTGTGCAATGTTT+TGG 0.298943 4_1:-80700323 Msa0576640:CDS
AATGAAAGGCTGGGATTAAA+AGG 0.299988 4_1:-80701566 None:intergenic
TTCCTTCTCGTTACATCAAT+TGG 0.303076 4_1:-80701238 Msa0576640:CDS
ATTTAACTTCTCCCCTGTTT+GGG 0.316713 4_1:+80699429 None:intergenic
TATGACAGAAAGCAGTTATC+TGG 0.323186 4_1:-80698751 Msa0576640:CDS
TTGGATTCCGCGAGAAGAAT+TGG 0.326476 4_1:+80701379 None:intergenic
TACCCATCCAGTGAACTAAA+TGG 0.333240 4_1:+80698673 None:intergenic
AAATCACCAGCTAGGATTAC+AGG 0.344241 4_1:+80699095 None:intergenic
CACAGTCCCTCTCAGAGAAA+TGG 0.360946 4_1:-80699127 Msa0576640:CDS
GGCGCGTTTCATTGTTGATT+TGG 0.375954 4_1:-80701510 Msa0576640:five_prime_UTR
TATGTCTGTAGATTTATTAT+GGG 0.380804 4_1:+80697429 None:intergenic
ACGTACTCTATAACCCAAAC+AGG 0.383038 4_1:-80699442 Msa0576640:CDS
CGATCAATCCCTCGCATCTC+CGG 0.396649 4_1:-80701336 Msa0576640:CDS
TGAAGCTGCTCTCGTGGCCG+TGG 0.399958 4_1:+80701436 None:intergenic
AGCTGCTTTCCTATGACTGC+AGG 0.402865 4_1:+80697360 None:intergenic
ACAGTCCCTCTCAGAGAAAT+GGG 0.404948 4_1:-80699126 Msa0576640:CDS
TTTCATTGTTGATTTGGAAA+TGG 0.416155 4_1:-80701504 Msa0576640:exon
CTCGCGGAATCCAACGCCGT+TGG 0.420004 4_1:-80701370 Msa0576640:CDS
TCGCGGAATCCAACGCCGTT+GGG 0.420839 4_1:-80701369 Msa0576640:CDS
GTTAGGTTCCGATTGTTAGA+TGG 0.422141 4_1:-80700199 Msa0576640:intron
GGTGTAAGAATTTCTTTACT+TGG 0.427129 4_1:-80697223 Msa0576640:three_prime_UTR
ATCCTGTACAGGCAGATGTC+TGG 0.429385 4_1:-80699500 Msa0576640:intron
AGCAGCTCAGCGTTTCTGTT+AGG 0.431311 4_1:-80697344 Msa0576640:three_prime_UTR
AGTTAGTCCATTTAGTTCAC+TGG 0.436776 4_1:-80698680 Msa0576640:CDS
AACAGGGGAGAAGTTAAATT+AGG 0.439956 4_1:-80699425 Msa0576640:CDS
TTTCCAGATTGTTAGACTGC+TGG 0.446570 4_1:-80698066 Msa0576640:intron
TTCTCGCCTAAAACTTGAGC+AGG 0.447757 4_1:+80698712 None:intergenic
TAGGCTACAAAAGAATGAAT+AGG 0.454058 4_1:+80697947 None:intergenic
GAAAGTGGGAAGCGACCATT+TGG 0.455117 4_1:-80697482 Msa0576640:CDS
TGGAAATGGCCTCTTCAACT+TGG 0.457725 4_1:-80701490 Msa0576640:exon
ACCAAGAAACTTTGAGTGAT+AGG 0.465242 4_1:+80697798 None:intergenic
AGCATGTACCCTGCAGTCAT+AGG 0.467771 4_1:-80697369 Msa0576640:three_prime_UTR
TATTCAATTCAGATTAAGGT+TGG 0.472654 4_1:-80697257 Msa0576640:three_prime_UTR
TGCTTTCTCCATCTAACAAT+CGG 0.477694 4_1:+80700191 None:intergenic
ATTCAATTCAGATTAAGGTT+GGG 0.477992 4_1:-80697256 Msa0576640:three_prime_UTR
TTGAGTGATAGGAAGTTGCC+AGG 0.485641 4_1:+80697809 None:intergenic
TGAAGCAGTAATACCTTGCA+TGG 0.486803 4_1:+80697566 None:intergenic
GAAGCTGCTCTCGTGGCCGT+GGG 0.489832 4_1:+80701437 None:intergenic
ATGGAGCTGCAGAGACGCAC+TGG 0.496564 4_1:-80700354 Msa0576640:intron
ATGCTTCAACCCAACGGCGT+TGG 0.499189 4_1:+80701360 None:intergenic
ATTCAGACAGCAACGCCAAA+TGG 0.501870 4_1:+80697467 None:intergenic
GTCCATTTAGTTCACTGGAT+GGG 0.505556 4_1:-80698675 Msa0576640:intron
ACGGTATCAAGAACTCTAGT+TGG 0.524597 4_1:+80697623 None:intergenic
GATACTGAATTTGAAGAAAG+AGG 0.531310 4_1:+80701460 None:intergenic
TCAGGGATCTGCTAGTACAC+GGG 0.531743 4_1:-80697848 Msa0576640:intron
ATGGGAGACCACCTTCCCTC+AGG 0.538051 4_1:+80697585 None:intergenic
TGGTGATTCTGAGTGTCACT+TGG 0.547776 4_1:-80698017 Msa0576640:CDS
CAGGAGATCACTAATTGAAA+CGG 0.549198 4_1:+80697604 None:intergenic
AATGCCCCTGTAATCCTAGC+TGG 0.549245 4_1:-80699101 Msa0576640:CDS
GGAGATGAGCCAAGTTGAAG+AGG 0.549843 4_1:+80701481 None:intergenic
AGCATTCAATATAAGAACAT+TGG 0.551080 4_1:-80700172 Msa0576640:CDS
AGTCCATTTAGTTCACTGGA+TGG 0.553616 4_1:-80698676 Msa0576640:CDS
TAAAAGGAGAGAAAAGCATC+GGG 0.554395 4_1:-80701550 Msa0576640:five_prime_UTR
TTTCTTGATCAATAGAAAGT+GGG 0.561560 4_1:-80697496 Msa0576640:intron
TTAAGGTTGGGTTCATGTAG+TGG 0.561790 4_1:-80697244 Msa0576640:three_prime_UTR
GAAGCTACTGTGAATCTCTC+CGG 0.562106 4_1:+80701317 None:intergenic
AATCACCAGCTAGGATTACA+GGG 0.564155 4_1:+80699096 None:intergenic
TTTATTATGGGTCACCGAGA+AGG 0.570608 4_1:+80697441 None:intergenic
ACAAATTCCAATTCTTCTCG+CGG 0.576515 4_1:-80701386 Msa0576640:CDS
TACAGACATAGCTGCAGCAG+CGG 0.576656 4_1:-80697416 Msa0576640:CDS
GGGATTCAATGATGAACCCC+TGG 0.576714 4_1:-80697827 Msa0576640:CDS
CAAGTTCTTGTCAACGTCTG+AGG 0.582334 4_1:-80698947 Msa0576640:intron
ATCTGACTCAAGAAGACTGT+TGG 0.583131 4_1:-80699477 Msa0576640:CDS
TTCAATTAGTGATCTCCTGA+GGG 0.586822 4_1:-80697600 Msa0576640:CDS
GAATCTCTCCGGAGATGCGA+GGG 0.587050 4_1:+80701328 None:intergenic
TTCAGGGATCTGCTAGTACA+CGG 0.587698 4_1:-80697849 Msa0576640:intron
TGAATCTCTCCGGAGATGCG+AGG 0.589278 4_1:+80701327 None:intergenic
TGCTATTCAACATCTACTCT+AGG 0.591099 4_1:+80697388 None:intergenic
TGAGTGATAGGAAGTTGCCA+GGG 0.592999 4_1:+80697810 None:intergenic
CTTGTAAGCAGATAATATCA+GGG 0.598522 4_1:+80701171 None:intergenic
ATTACCCCATTTCTCTGAGA+GGG 0.600248 4_1:+80699121 None:intergenic
GCTGCTTTCCTATGACTGCA+GGG 0.601847 4_1:+80697361 None:intergenic
TTAAAAGGAGAGAAAAGCAT+CGG 0.603343 4_1:-80701551 Msa0576640:five_prime_UTR
CGGGATTAGATAACGAATTG+TGG 0.603717 4_1:-80701531 Msa0576640:five_prime_UTR
CTTCAAATTCAGTATCCCCA+CGG 0.603746 4_1:-80701453 Msa0576640:CDS
AGTGATCTCCTGAGGGAAGG+TGG 0.607197 4_1:-80697593 Msa0576640:CDS
TTTCAATTAGTGATCTCCTG+AGG 0.607813 4_1:-80697601 Msa0576640:CDS
GGAAGGTGGTCTCCCATGCA+AGG 0.611157 4_1:-80697579 Msa0576640:intron
AATTTGTGAAGCTGCTCTCG+TGG 0.615555 4_1:+80701430 None:intergenic
TACTGTTAAAATCACCAGCT+AGG 0.623724 4_1:+80699087 None:intergenic
AGACTGCTGGACAGATGAAG+AGG 0.627523 4_1:-80698053 Msa0576640:CDS
CGCACTGGAGATACATCTGA+CGG 0.628038 4_1:-80700339 Msa0576640:CDS
CGTACTCTATAACCCAAACA+GGG 0.629740 4_1:-80699441 Msa0576640:CDS
GACTCAAGAAGACTGTTGGT+TGG 0.630826 4_1:-80699473 Msa0576640:CDS
CAGGGATCTGCTAGTACACG+GGG 0.637552 4_1:-80697847 Msa0576640:CDS
ATTAGTGATCTCCTGAGGGA+AGG 0.638640 4_1:-80697596 Msa0576640:CDS
GAGTGATAGGAAGTTGCCAG+GGG 0.638885 4_1:+80697811 None:intergenic
GAAGCAGTAATACCTTGCAT+GGG 0.639143 4_1:+80697567 None:intergenic
CATTACCCCATTTCTCTGAG+AGG 0.644466 4_1:+80699120 None:intergenic
TTCCAATTGATGTAACGAGA+AGG 0.644846 4_1:+80701236 None:intergenic
ACATGATACAGGTACTCTGA+AGG 0.655025 4_1:-80697653 Msa0576640:intron
TGTTTGGGTTATAGAGTACG+TGG 0.671747 4_1:+80699444 None:intergenic
GATCGAATGCTTCAACCCAA+CGG 0.679407 4_1:+80701354 None:intergenic
AAGCTGCTCTCGTGGCCGTG+GGG 0.685167 4_1:+80701438 None:intergenic
ATGAATAGGTACATTGACTG+TGG 0.690316 4_1:+80697961 None:intergenic
CAGTCCCTCTCAGAGAAATG+GGG 0.705569 4_1:-80699125 Msa0576640:CDS
GTTGAGCAACATTATCACGA+AGG 0.708907 4_1:+80700149 None:intergenic
ATCACCAGCTAGGATTACAG+GGG 0.736591 4_1:+80699097 None:intergenic
GTACTCTATAACCCAAACAG+GGG 0.750640 4_1:-80699440 Msa0576640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATTTCAAGATAATTTA+AGG + chr4_1:80699526-80699545 None:intergenic 10.0%
!! TAAATATGAAAGAAAAAAAT+TGG + chr4_1:80701390-80701409 None:intergenic 10.0%
!! TAGATAACATATTATGAAAA+TGG + chr4_1:80697927-80697946 None:intergenic 15.0%
!! ATAAAATAAGACTTCAAATT+AGG - chr4_1:80698098-80698117 Msa0576640:intron 15.0%
!! TAAAATAAGACTTCAAATTA+GGG - chr4_1:80698099-80698118 Msa0576640:intron 15.0%
!! GTAAATAGTAAGATATAAAT+AGG + chr4_1:80699479-80699498 None:intergenic 15.0%
!! AGAATTAATAGAAAGAAAAA+AGG + chr4_1:80700063-80700082 None:intergenic 15.0%
!! TCAAATATTTAATCAAACTT+TGG + chr4_1:80700218-80700237 None:intergenic 15.0%
!!! TTGATTAAATATTTGAAATC+AGG - chr4_1:80700222-80700241 Msa0576640:intron 15.0%
!! GGAGAAATATATTATTATTT+AGG + chr4_1:80700363-80700382 None:intergenic 15.0%
!!! GTTTTTTGTATGATATAAAT+TGG - chr4_1:80700512-80700531 Msa0576640:intron 15.0%
!!! AAGTGTTATTAAGCATAAAA+TGG - chr4_1:80698015-80698034 Msa0576640:CDS 20.0%
!!! AGTTAGTTCTCTTTATATTA+TGG - chr4_1:80698066-80698085 Msa0576640:intron 20.0%
!!! TGAGTTTCTATTTTTTACTT+TGG - chr4_1:80698124-80698143 Msa0576640:intron 20.0%
!! ATGTGAAAAAAATTTAGCAT+TGG - chr4_1:80698263-80698282 Msa0576640:intron 20.0%
!!! GTTTATAAGTTCTAACTAAT+GGG - chr4_1:80698309-80698328 Msa0576640:intron 20.0%
!!! TCTCTAATATTTTCTTCTAA+TGG + chr4_1:80698774-80698793 None:intergenic 20.0%
!!! ACATGCAAATTTTATACTTT+TGG + chr4_1:80698916-80698935 None:intergenic 20.0%
!! AGTATAAAATTTGCATGTAA+AGG - chr4_1:80698918-80698937 Msa0576640:intron 20.0%
!! TTAATAAAGCTAGACAATAA+AGG + chr4_1:80699131-80699150 None:intergenic 20.0%
!!! AAATAGGATTTTCAAACTTA+AGG + chr4_1:80699463-80699482 None:intergenic 20.0%
!! TTCAAGATAATTTAAGGATT+AGG + chr4_1:80699520-80699539 None:intergenic 20.0%
!! TGCTTAATTGAAAATATATG+TGG - chr4_1:80699903-80699922 Msa0576640:intron 20.0%
!! ATTTATACATTAACTGAAGA+AGG - chr4_1:80700548-80700567 Msa0576640:intron 20.0%
!! TTAAAATGATAAACCTATTC+AGG - chr4_1:80700839-80700858 Msa0576640:intron 20.0%
!! TAAAATGATAAACCTATTCA+GGG - chr4_1:80700840-80700859 Msa0576640:intron 20.0%
!! TATGTCTGTAGATTTATTAT+GGG + chr4_1:80701279-80701298 None:intergenic 20.0%
!! AGTATATTCAATTCAGATTA+AGG - chr4_1:80701444-80701463 Msa0576640:CDS 20.0%
!!! TTTCATTGTTGATTTGGAAA+TGG - chr4_1:80697201-80697220 Msa0576640:three_prime_UTR 25.0%
!!! TTTCTGATGAACTTTTTCAA+TGG - chr4_1:80697509-80697528 Msa0576640:intron 25.0%
! TTATTAGCATAGTGAAAAGT+TGG + chr4_1:80697570-80697589 None:intergenic 25.0%
!!! TAAGTTTTGTGAGACTATTT+GGG + chr4_1:80697818-80697837 None:intergenic 25.0%
!!! ATAAGTTTTGTGAGACTATT+TGG + chr4_1:80697819-80697838 None:intergenic 25.0%
! TCTAATAAGTCAATTCAAAC+AGG - chr4_1:80697853-80697872 Msa0576640:intron 25.0%
!! AGAGAACTAACTATCAATTT+TGG + chr4_1:80698058-80698077 None:intergenic 25.0%
! AAATTGATTGAGAATATACC+AGG + chr4_1:80698160-80698179 None:intergenic 25.0%
! ACTTATAAACCTACATATCA+AGG + chr4_1:80698299-80698318 None:intergenic 25.0%
!! GGTTTATAAGTTCTAACTAA+TGG - chr4_1:80698308-80698327 Msa0576640:intron 25.0%
!!! CTTTTTCTTATTTGTCTGTT+AGG - chr4_1:80698489-80698508 Msa0576640:intron 25.0%
! AGCATTCAATATAAGAACAT+TGG - chr4_1:80698533-80698552 Msa0576640:intron 25.0%
! TTGATTATTAGCATTGTTGT+AGG - chr4_1:80698965-80698984 Msa0576640:intron 25.0%
!!! TAAGTGTTTTATTCTCTCTT+TGG - chr4_1:80699308-80699327 Msa0576640:intron 25.0%
!! GAGTAAAAACCTTTGTTTAT+AGG + chr4_1:80699334-80699353 None:intergenic 25.0%
! ATAATTTAAGGATTAGGTGT+AGG + chr4_1:80699514-80699533 None:intergenic 25.0%
! GCATATTTCAGAAAATAGAT+AGG - chr4_1:80699651-80699670 Msa0576640:intron 25.0%
!!! TTTTGCTTTTAGAAAACTTC+AGG + chr4_1:80700384-80700403 None:intergenic 25.0%
! AATTTCCATATTCTTTCTCA+TGG - chr4_1:80700799-80700818 Msa0576640:intron 25.0%
! TTGGTACTGTAGATTATTTA+TGG - chr4_1:80700925-80700944 Msa0576640:intron 25.0%
! TTGTGTGATTGTCATTATTA+AGG + chr4_1:80701017-80701036 None:intergenic 25.0%
! CAAGAAAAAAACTAGTTAGA+TGG + chr4_1:80701196-80701215 None:intergenic 25.0%
!! TTTTCTTGATCAATAGAAAG+TGG - chr4_1:80701208-80701227 Msa0576640:CDS 25.0%
! TTTCTTGATCAATAGAAAGT+GGG - chr4_1:80701209-80701228 Msa0576640:CDS 25.0%
! CTATGTCTGTAGATTTATTA+TGG + chr4_1:80701280-80701299 None:intergenic 25.0%
! TATTCAATTCAGATTAAGGT+TGG - chr4_1:80701448-80701467 Msa0576640:CDS 25.0%
! ATTCAATTCAGATTAAGGTT+GGG - chr4_1:80701449-80701468 Msa0576640:CDS 25.0%
! TTAAAAGGAGAGAAAAGCAT+CGG - chr4_1:80697154-80697173 Msa0576640:three_prime_UTR 30.0%
GATACTGAATTTGAAGAAAG+AGG + chr4_1:80697248-80697267 None:intergenic 30.0%
CTTGTAAGCAGATAATATCA+GGG + chr4_1:80697537-80697556 None:intergenic 30.0%
ACTTGTAAGCAGATAATATC+AGG + chr4_1:80697538-80697557 None:intergenic 30.0%
ATTATTCTCACTCATTGATC+AGG - chr4_1:80697622-80697641 Msa0576640:CDS 30.0%
!!! ACTCTCCAATATTTTGGTAA+AGG - chr4_1:80697664-80697683 Msa0576640:intron 30.0%
GAAGCAATAAATAGCACATA+GGG + chr4_1:80697879-80697898 None:intergenic 30.0%
!! TATGTGCTATTTATTGCTTC+CGG - chr4_1:80697879-80697898 Msa0576640:intron 30.0%
AAGCAAATTATATGAGCATC+CGG + chr4_1:80697901-80697920 None:intergenic 30.0%
AGCCTAATGAATTGTGTAAA+TGG - chr4_1:80698332-80698351 Msa0576640:intron 30.0%
CTCCATTTACACAATTCATT+AGG + chr4_1:80698337-80698356 None:intergenic 30.0%
TGATACCAGTTTATTCACTT+TGG - chr4_1:80698461-80698480 Msa0576640:intron 30.0%
ACTAACCAAAGTGAATAAAC+TGG + chr4_1:80698469-80698488 None:intergenic 30.0%
CAGTTAAACAAAATCAACGT+CGG - chr4_1:80698723-80698742 Msa0576640:CDS 30.0%
ATAAAGCAAGAGATGACAAA+AGG + chr4_1:80699064-80699083 None:intergenic 30.0%
! TTTTGTCATCTCTTGCTTTA+TGG - chr4_1:80699063-80699082 Msa0576640:intron 30.0%
!!! GACAAAAGCATTTTAGGATT+AGG + chr4_1:80699409-80699428 None:intergenic 30.0%
!!! CAAGATGACAAAAGCATTTT+AGG + chr4_1:80699415-80699434 None:intergenic 30.0%
AATTCTATAAGCTACCACTT+AGG - chr4_1:80700077-80700096 Msa0576640:intron 30.0%
! AGGCATTTTGTATATGATAC+CGG - chr4_1:80700477-80700496 Msa0576640:intron 30.0%
AAAAAACTGCATGAAAATGC+CGG + chr4_1:80700499-80700518 None:intergenic 30.0%
! TACGAACTATTCAGCTTTAA+TGG + chr4_1:80700722-80700741 None:intergenic 30.0%
TAGGCTACAAAAGAATGAAT+AGG + chr4_1:80700761-80700780 None:intergenic 30.0%
ATAGACCATGAGAAAGAATA+TGG + chr4_1:80700807-80700826 None:intergenic 30.0%
GGTGTAAGAATTTCTTTACT+TGG - chr4_1:80701482-80701501 Msa0576640:CDS 30.0%
!! TAAAAGGAGAGAAAAGCATC+GGG - chr4_1:80697155-80697174 Msa0576640:three_prime_UTR 35.0%
ACAAATTCCAATTCTTCTCG+CGG - chr4_1:80697319-80697338 Msa0576640:three_prime_UTR 35.0%
TTCCTTCTCGTTACATCAAT+TGG - chr4_1:80697467-80697486 Msa0576640:CDS 35.0%
TTCCAATTGATGTAACGAGA+AGG + chr4_1:80697472-80697491 None:intergenic 35.0%
! CGTTGAACTCTCCAATATTT+TGG - chr4_1:80697658-80697677 Msa0576640:intron 35.0%
!!! TCCAATATTTTGGTAAAGGC+TGG - chr4_1:80697668-80697687 Msa0576640:intron 35.0%
TCCAGCCTTTACCAAAATAT+TGG + chr4_1:80697672-80697691 None:intergenic 35.0%
TGGATATGCAGGTTCTTATA+AGG - chr4_1:80697688-80697707 Msa0576640:intron 35.0%
GCTGTTTGAATAAGCTATCT+TGG - chr4_1:80697724-80697743 Msa0576640:intron 35.0%
GGAAGCAATAAATAGCACAT+AGG + chr4_1:80697880-80697899 None:intergenic 35.0%
!!! TACTTTGGTTTTGTAATGCC+TGG - chr4_1:80698139-80698158 Msa0576640:intron 35.0%
TGCTTTCTCCATCTAACAAT+CGG + chr4_1:80698517-80698536 None:intergenic 35.0%
!!! TGCTCAACTTCTAGTTTTTG+AGG - chr4_1:80698571-80698590 Msa0576640:intron 35.0%
! TTAGAGATTGTTTTCTCCCA+TGG - chr4_1:80698787-80698806 Msa0576640:intron 35.0%
ATGCAGTCATAAATCAGCAA+TGG + chr4_1:80698878-80698897 None:intergenic 35.0%
! ATTTAACTTCTCCCCTGTTT+GGG + chr4_1:80699279-80699298 None:intergenic 35.0%
! AATTTAACTTCTCCCCTGTT+TGG + chr4_1:80699280-80699299 None:intergenic 35.0%
AACAGGGGAGAAGTTAAATT+AGG - chr4_1:80699280-80699299 Msa0576640:intron 35.0%
TCTCTTTGGCCTATAAACAA+AGG - chr4_1:80699322-80699341 Msa0576640:intron 35.0%
TACTGTTAAAATCACCAGCT+AGG + chr4_1:80699621-80699640 None:intergenic 35.0%
!! TGATTTTAACAGTACTCCTG+AGG - chr4_1:80699627-80699646 Msa0576640:intron 35.0%
!!! TTTTCTGAAATATGCACCTC+AGG + chr4_1:80699646-80699665 None:intergenic 35.0%
ATCAATCTTATTGCTGTGTC+TGG + chr4_1:80699846-80699865 None:intergenic 35.0%
! AAAATACTTGCTACGACTCA+TGG + chr4_1:80699873-80699892 None:intergenic 35.0%
TATGACAGAAAGCAGTTATC+TGG - chr4_1:80699954-80699973 Msa0576640:intron 35.0%
! AGTTAGTCCATTTAGTTCAC+TGG - chr4_1:80700025-80700044 Msa0576640:intron 35.0%
GATTGCATGAGCAGTTAATA+TGG - chr4_1:80700099-80700118 Msa0576640:intron 35.0%
! ATGAATAGGTACATTGACTG+TGG + chr4_1:80700747-80700766 None:intergenic 35.0%
TCCTATCACTCAAAGTTTCT+TGG - chr4_1:80700906-80700925 Msa0576640:intron 35.0%
ACCAAGAAACTTTGAGTGAT+AGG + chr4_1:80700910-80700929 None:intergenic 35.0%
AACATTATCAGCACTTAGGA+AGG + chr4_1:80700960-80700979 None:intergenic 35.0%
!! TCCTAAGTGCTGATAATGTT+CGG - chr4_1:80700960-80700979 Msa0576640:intron 35.0%
AGATTGATTGCACATGATAC+AGG - chr4_1:80701041-80701060 Msa0576640:intron 35.0%
CAGGAGATCACTAATTGAAA+CGG + chr4_1:80701104-80701123 None:intergenic 35.0%
TTTCAATTAGTGATCTCCTG+AGG - chr4_1:80701104-80701123 Msa0576640:intron 35.0%
TTCAATTAGTGATCTCCTGA+GGG - chr4_1:80701105-80701124 Msa0576640:intron 35.0%
TGCTATTCAACATCTACTCT+AGG + chr4_1:80701320-80701339 None:intergenic 35.0%
CGGGATTAGATAACGAATTG+TGG - chr4_1:80697174-80697193 Msa0576640:three_prime_UTR 40.0%
CTTCAAATTCAGTATCCCCA+CGG - chr4_1:80697252-80697271 Msa0576640:three_prime_UTR 40.0%
ATTCTCACTCATTGATCAGG+AGG - chr4_1:80697625-80697644 Msa0576640:CDS 40.0%
ACTTATGAAAACAGCCTACG+AGG + chr4_1:80697792-80697811 None:intergenic 40.0%
GTTAGGTTCCGATTGTTAGA+TGG - chr4_1:80698506-80698525 Msa0576640:intron 40.0%
GTTGAGCAACATTATCACGA+AGG + chr4_1:80698559-80698578 None:intergenic 40.0%
! ACGCGAATGCTTATTCGTTT+TGG - chr4_1:80698616-80698635 Msa0576640:intron 40.0%
TGCTTGCTTTATGGTTCCAT+GGG + chr4_1:80698806-80698825 None:intergenic 40.0%
ATGCTTGCTTTATGGTTCCA+TGG + chr4_1:80698807-80698826 None:intergenic 40.0%
CCTTGCATATGCTTGCTTTA+TGG + chr4_1:80698815-80698834 None:intergenic 40.0%
CCATAAAGCAAGCATATGCA+AGG - chr4_1:80698812-80698831 Msa0576640:intron 40.0%
ATACGTAGCAAACACCTACT+GGG + chr4_1:80698845-80698864 None:intergenic 40.0%
! AGTAGGTGTTTGCTACGTAT+GGG - chr4_1:80698845-80698864 Msa0576640:intron 40.0%
! TTGTATAACAGTGAGTGCTG+TGG - chr4_1:80699010-80699029 Msa0576640:intron 40.0%
ACAAAAGGAGCAAGGAATTC+AGG + chr4_1:80699049-80699068 None:intergenic 40.0%
AAGAGATGACAAAAGGAGCA+AGG + chr4_1:80699057-80699076 None:intergenic 40.0%
TAGGATGACCAACAGATGTA+CGG + chr4_1:80699170-80699189 None:intergenic 40.0%
GGATGGAGTTAAAGATGCAT+AGG + chr4_1:80699189-80699208 None:intergenic 40.0%
TCTTTAACTCCATCCTGTAC+AGG - chr4_1:80699194-80699213 Msa0576640:intron 40.0%
ATCTGACTCAAGAAGACTGT+TGG - chr4_1:80699228-80699247 Msa0576640:intron 40.0%
! TGTTTGGGTTATAGAGTACG+TGG + chr4_1:80699264-80699283 None:intergenic 40.0%
ACGTACTCTATAACCCAAAC+AGG - chr4_1:80699263-80699282 Msa0576640:intron 40.0%
CGTACTCTATAACCCAAACA+GGG - chr4_1:80699264-80699283 Msa0576640:intron 40.0%
GTACTCTATAACCCAAACAG+GGG - chr4_1:80699265-80699284 Msa0576640:intron 40.0%
! ATTACCCCATTTCTCTGAGA+GGG + chr4_1:80699587-80699606 None:intergenic 40.0%
AATCACCAGCTAGGATTACA+GGG + chr4_1:80699612-80699631 None:intergenic 40.0%
AAATCACCAGCTAGGATTAC+AGG + chr4_1:80699613-80699632 None:intergenic 40.0%
! AGTCCATTTAGTTCACTGGA+TGG - chr4_1:80700029-80700048 Msa0576640:intron 40.0%
! GTCCATTTAGTTCACTGGAT+GGG - chr4_1:80700030-80700049 Msa0576640:intron 40.0%
TACCCATCCAGTGAACTAAA+TGG + chr4_1:80700035-80700054 None:intergenic 40.0%
AGAACACACACATTCAAGAG+TGG + chr4_1:80700281-80700300 None:intergenic 40.0%
AAATCCAATGAGCGAAAAGC+AGG + chr4_1:80700416-80700435 None:intergenic 40.0%
CCTAACCTATATTCACGAGA+GGG + chr4_1:80700460-80700479 None:intergenic 40.0%
TTTCCAGATTGTTAGACTGC+TGG - chr4_1:80700639-80700658 Msa0576640:intron 40.0%
GAAGAGGTAAAAACTGCAAC+TGG - chr4_1:80700668-80700687 Msa0576640:intron 40.0%
!! CCTAAGTGCTGATAATGTTC+GGG - chr4_1:80700961-80700980 Msa0576640:intron 40.0%
ACATGATACAGGTACTCTGA+AGG - chr4_1:80701052-80701071 Msa0576640:intron 40.0%
ACGGTATCAAGAACTCTAGT+TGG + chr4_1:80701085-80701104 None:intergenic 40.0%
GAAGCAGTAATACCTTGCAT+GGG + chr4_1:80701141-80701160 None:intergenic 40.0%
TGAAGCAGTAATACCTTGCA+TGG + chr4_1:80701142-80701161 None:intergenic 40.0%
! GCTGTCTGAATTTTCCTTCT+CGG - chr4_1:80701250-80701269 Msa0576640:CDS 40.0%
TTTATTATGGGTCACCGAGA+AGG + chr4_1:80701267-80701286 None:intergenic 40.0%
TTAAGGTTGGGTTCATGTAG+TGG - chr4_1:80701461-80701480 Msa0576640:CDS 40.0%
! GGCGCGTTTCATTGTTGATT+TGG - chr4_1:80697195-80697214 Msa0576640:three_prime_UTR 45.0%
TGGAAATGGCCTCTTCAACT+TGG - chr4_1:80697215-80697234 Msa0576640:three_prime_UTR 45.0%
AATTTGTGAAGCTGCTCTCG+TGG + chr4_1:80697278-80697297 None:intergenic 45.0%
TTGGATTCCGCGAGAAGAAT+TGG + chr4_1:80697329-80697348 None:intergenic 45.0%
GATCGAATGCTTCAACCCAA+CGG + chr4_1:80697354-80697373 None:intergenic 45.0%
GAAGCTACTGTGAATCTCTC+CGG + chr4_1:80697391-80697410 None:intergenic 45.0%
TTGGTAAAGGCTGGATATGC+AGG - chr4_1:80697677-80697696 Msa0576640:intron 45.0%
CATATCAACGATGTCCTCGT+AGG - chr4_1:80697775-80697794 Msa0576640:intron 45.0%
AGCAGTGCACCTTGATATGT+AGG - chr4_1:80698287-80698306 Msa0576640:intron 45.0%
! CTGACGGTTGTGCAATGTTT+TGG - chr4_1:80698382-80698401 Msa0576640:intron 45.0%
ATTCGCGTCATTGGCATCAA+GGG + chr4_1:80698604-80698623 None:intergenic 45.0%
CGAATAAGCATTCGCGTCAT+TGG + chr4_1:80698613-80698632 None:intergenic 45.0%
! AATGACTTGAGCACTGCATC+AGG - chr4_1:80698698-80698717 Msa0576640:CDS 45.0%
CATACGTAGCAAACACCTAC+TGG + chr4_1:80698846-80698865 None:intergenic 45.0%
! CAGTAGGTGTTTGCTACGTA+TGG - chr4_1:80698844-80698863 Msa0576640:intron 45.0%
! GTAGGTGTTTGCTACGTATG+GGG - chr4_1:80698846-80698865 Msa0576640:intron 45.0%
GACTCAAGAAGACTGTTGGT+TGG - chr4_1:80699232-80699251 Msa0576640:intron 45.0%
TTACTCCCTCCTCTGCATAA+AGG - chr4_1:80699348-80699367 Msa0576640:intron 45.0%
TAAAGGTCTGGCTGATCAGT+TGG - chr4_1:80699365-80699384 Msa0576640:intron 45.0%
AAAGGTCTGGCTGATCAGTT+GGG - chr4_1:80699366-80699385 Msa0576640:intron 45.0%
ACAGTCCCTCTCAGAGAAAT+GGG - chr4_1:80699579-80699598 Msa0576640:intron 45.0%
CATTACCCCATTTCTCTGAG+AGG + chr4_1:80699588-80699607 None:intergenic 45.0%
ATCACCAGCTAGGATTACAG+GGG + chr4_1:80699611-80699630 None:intergenic 45.0%
GTACTCGTTCTTCAACAGAG+TGG - chr4_1:80699729-80699748 Msa0576640:intron 45.0%
CAAGTTCTTGTCAACGTCTG+AGG - chr4_1:80699758-80699777 Msa0576640:intron 45.0%
! TGTCGTCCTGCTCAAGTTTT+AGG - chr4_1:80699987-80700006 Msa0576640:intron 45.0%
TTCTCGCCTAAAACTTGAGC+AGG + chr4_1:80699996-80700015 None:intergenic 45.0%
ACTGCTCATGCAATCCTAAG+TGG + chr4_1:80700094-80700113 None:intergenic 45.0%
!! TTGACCTGCTTTTCGCTCAT+TGG - chr4_1:80700409-80700428 Msa0576640:intron 45.0%
GAATGCCCTCTCGTGAATAT+AGG - chr4_1:80700452-80700471 Msa0576640:intron 45.0%
CCCTCTCGTGAATATAGGTT+AGG - chr4_1:80700457-80700476 Msa0576640:intron 45.0%
GCCTAACCTATATTCACGAG+AGG + chr4_1:80700461-80700480 None:intergenic 45.0%
TGTCCAGCAGTCTAACAATC+TGG + chr4_1:80700645-80700664 None:intergenic 45.0%
! TGGTGATTCTGAGTGTCACT+TGG - chr4_1:80700688-80700707 Msa0576640:intron 45.0%
GTACTAGCAGATCCCTGAAT+AGG + chr4_1:80700855-80700874 None:intergenic 45.0%
TTCAGGGATCTGCTAGTACA+CGG - chr4_1:80700856-80700875 Msa0576640:intron 45.0%
TGAGTGATAGGAAGTTGCCA+GGG + chr4_1:80700898-80700917 None:intergenic 45.0%
TTGAGTGATAGGAAGTTGCC+AGG + chr4_1:80700899-80700918 None:intergenic 45.0%
CCCGAACATTATCAGCACTT+AGG + chr4_1:80700964-80700983 None:intergenic 45.0%
ATTAGTGATCTCCTGAGGGA+AGG - chr4_1:80701109-80701128 Msa0576640:intron 45.0%
ATTCAGACAGCAACGCCAAA+TGG + chr4_1:80701241-80701260 None:intergenic 45.0%
!!! TTTTAAATTTAAAAATTTGA+AGG - chr4_1:80697987-80698006 Msa0576640:CDS 5.0%
!! TAGTATAAATAATAAATAAT+AGG + chr4_1:80700780-80700799 None:intergenic 5.0%
! GGAGATGAGCCAAGTTGAAG+AGG + chr4_1:80697227-80697246 None:intergenic 50.0%
CTCACTCATTGATCAGGAGG+TGG - chr4_1:80697628-80697647 Msa0576640:CDS 50.0%
CGCACTGGAGATACATCTGA+CGG - chr4_1:80698366-80698385 Msa0576640:intron 50.0%
CATTCGCGTCATTGGCATCA+AGG + chr4_1:80698605-80698624 None:intergenic 50.0%
TGCAAGGTTTCCATCCCAGT+AGG - chr4_1:80698828-80698847 Msa0576640:intron 50.0%
GTAGCAAACACCTACTGGGA+TGG + chr4_1:80698841-80698860 None:intergenic 50.0%
TTGTCCTGCCGTACATCTGT+TGG - chr4_1:80699159-80699178 Msa0576640:intron 50.0%
ATGACCAACAGATGTACGGC+AGG + chr4_1:80699166-80699185 None:intergenic 50.0%
AGACATCTGCCTGTACAGGA+TGG + chr4_1:80699206-80699225 None:intergenic 50.0%
ATCCTGTACAGGCAGATGTC+TGG - chr4_1:80699205-80699224 Msa0576640:intron 50.0%
ATCCAGACATCTGCCTGTAC+AGG + chr4_1:80699210-80699229 None:intergenic 50.0%
CCAGACCTTTATGCAGAGGA+GGG + chr4_1:80699356-80699375 None:intergenic 50.0%
TCAGCCAGACCTTTATGCAG+AGG + chr4_1:80699360-80699379 None:intergenic 50.0%
AAGGTCTGGCTGATCAGTTG+GGG - chr4_1:80699367-80699386 Msa0576640:intron 50.0%
CACAGTCCCTCTCAGAGAAA+TGG - chr4_1:80699578-80699597 Msa0576640:intron 50.0%
CAGTCCCTCTCAGAGAAATG+GGG - chr4_1:80699580-80699599 Msa0576640:intron 50.0%
AATGCCCCTGTAATCCTAGC+TGG - chr4_1:80699604-80699623 Msa0576640:intron 50.0%
AGACTGCTGGACAGATGAAG+AGG - chr4_1:80700652-80700671 Msa0576640:intron 50.0%
TCAGGGATCTGCTAGTACAC+GGG - chr4_1:80700857-80700876 Msa0576640:intron 50.0%
GGGATTCAATGATGAACCCC+TGG - chr4_1:80700878-80700897 Msa0576640:intron 50.0%
GAGTGATAGGAAGTTGCCAG+GGG + chr4_1:80700897-80700916 None:intergenic 50.0%
GAAAGTGGGAAGCGACCATT+TGG - chr4_1:80701223-80701242 Msa0576640:CDS 50.0%
TACAGACATAGCTGCAGCAG+CGG - chr4_1:80701289-80701308 Msa0576640:CDS 50.0%
AGCATGTACCCTGCAGTCAT+AGG - chr4_1:80701336-80701355 Msa0576640:CDS 50.0%
! GCTGCTTTCCTATGACTGCA+GGG + chr4_1:80701347-80701366 None:intergenic 50.0%
! AGCTGCTTTCCTATGACTGC+AGG + chr4_1:80701348-80701367 None:intergenic 50.0%
AGCAGCTCAGCGTTTCTGTT+AGG - chr4_1:80701361-80701380 Msa0576640:CDS 50.0%
ATGCTTCAACCCAACGGCGT+TGG + chr4_1:80697348-80697367 None:intergenic 55.0%
CGATCAATCCCTCGCATCTC+CGG - chr4_1:80697369-80697388 Msa0576640:three_prime_UTR 55.0%
GAATCTCTCCGGAGATGCGA+GGG + chr4_1:80697380-80697399 None:intergenic 55.0%
TGAATCTCTCCGGAGATGCG+AGG + chr4_1:80697381-80697400 None:intergenic 55.0%
CCCTCCTCTGCATAAAGGTC+TGG - chr4_1:80699353-80699372 Msa0576640:intron 55.0%
GCCAGACCTTTATGCAGAGG+AGG + chr4_1:80699357-80699376 None:intergenic 55.0%
CAGGGATCTGCTAGTACACG+GGG - chr4_1:80700858-80700877 Msa0576640:intron 55.0%
AGTGATCTCCTGAGGGAAGG+TGG - chr4_1:80701112-80701131 Msa0576640:intron 55.0%
TCGCGGAATCCAACGCCGTT+GGG - chr4_1:80697336-80697355 Msa0576640:three_prime_UTR 60.0%
ATGGAGCTGCAGAGACGCAC+TGG - chr4_1:80698351-80698370 Msa0576640:intron 60.0%
ATGGGAGACCACCTTCCCTC+AGG + chr4_1:80701123-80701142 None:intergenic 60.0%
GGAAGGTGGTCTCCCATGCA+AGG - chr4_1:80701126-80701145 Msa0576640:intron 60.0%
AAGCTGCTCTCGTGGCCGTG+GGG + chr4_1:80697270-80697289 None:intergenic 65.0%
GAAGCTGCTCTCGTGGCCGT+GGG + chr4_1:80697271-80697290 None:intergenic 65.0%
TGAAGCTGCTCTCGTGGCCG+TGG + chr4_1:80697272-80697291 None:intergenic 65.0%
CTCGCGGAATCCAACGCCGT+TGG - chr4_1:80697335-80697354 Msa0576640:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 80697150 80701577 80697150 ID=Msa0576640;Name=Msa0576640
chr4_1 mRNA 80697150 80701577 80697150 ID=Msa0576640-mRNA-1;Parent=Msa0576640;Name=Msa0576640-mRNA-1;_AED=0.23;_eAED=0.23;_QI=70|0.8|0.90|1|1|1|11|240|402
chr4_1 exon 80697150 80697503 80697150 ID=Msa0576640-mRNA-1:exon:29008;Parent=Msa0576640-mRNA-1
chr4_1 exon 80697580 80697664 80697580 ID=Msa0576640-mRNA-1:exon:29007;Parent=Msa0576640-mRNA-1
chr4_1 exon 80697781 80697866 80697781 ID=Msa0576640-mRNA-1:exon:29006;Parent=Msa0576640-mRNA-1
chr4_1 exon 80697955 80698081 80697955 ID=Msa0576640-mRNA-1:exon:29005;Parent=Msa0576640-mRNA-1
chr4_1 exon 80698676 80698788 80698676 ID=Msa0576640-mRNA-1:exon:29004;Parent=Msa0576640-mRNA-1
chr4_1 exon 80698948 80698980 80698948 ID=Msa0576640-mRNA-1:exon:29003;Parent=Msa0576640-mRNA-1
chr4_1 exon 80699079 80699171 80699079 ID=Msa0576640-mRNA-1:exon:29002;Parent=Msa0576640-mRNA-1
chr4_1 exon 80699421 80699507 80699421 ID=Msa0576640-mRNA-1:exon:29001;Parent=Msa0576640-mRNA-1
chr4_1 exon 80700135 80700216 80700135 ID=Msa0576640-mRNA-1:exon:29000;Parent=Msa0576640-mRNA-1
chr4_1 exon 80700312 80700364 80700312 ID=Msa0576640-mRNA-1:exon:28999;Parent=Msa0576640-mRNA-1
chr4_1 exon 80701172 80701577 80701172 ID=Msa0576640-mRNA-1:exon:28998;Parent=Msa0576640-mRNA-1
chr4_1 five_prime_UTR 80701508 80701577 80701508 ID=Msa0576640-mRNA-1:five_prime_utr;Parent=Msa0576640-mRNA-1
chr4_1 CDS 80701172 80701507 80701172 ID=Msa0576640-mRNA-1:cds;Parent=Msa0576640-mRNA-1
chr4_1 CDS 80700312 80700364 80700312 ID=Msa0576640-mRNA-1:cds;Parent=Msa0576640-mRNA-1
chr4_1 CDS 80700135 80700216 80700135 ID=Msa0576640-mRNA-1:cds;Parent=Msa0576640-mRNA-1
chr4_1 CDS 80699421 80699507 80699421 ID=Msa0576640-mRNA-1:cds;Parent=Msa0576640-mRNA-1
chr4_1 CDS 80699079 80699171 80699079 ID=Msa0576640-mRNA-1:cds;Parent=Msa0576640-mRNA-1
chr4_1 CDS 80698948 80698980 80698948 ID=Msa0576640-mRNA-1:cds;Parent=Msa0576640-mRNA-1
chr4_1 CDS 80698676 80698788 80698676 ID=Msa0576640-mRNA-1:cds;Parent=Msa0576640-mRNA-1
chr4_1 CDS 80697955 80698081 80697955 ID=Msa0576640-mRNA-1:cds;Parent=Msa0576640-mRNA-1
chr4_1 CDS 80697781 80697866 80697781 ID=Msa0576640-mRNA-1:cds;Parent=Msa0576640-mRNA-1
chr4_1 CDS 80697580 80697664 80697580 ID=Msa0576640-mRNA-1:cds;Parent=Msa0576640-mRNA-1
chr4_1 CDS 80697390 80697503 80697390 ID=Msa0576640-mRNA-1:cds;Parent=Msa0576640-mRNA-1
chr4_1 three_prime_UTR 80697150 80697389 80697150 ID=Msa0576640-mRNA-1:three_prime_utr;Parent=Msa0576640-mRNA-1
Gene Sequence

>Msa0576640

ATGGCCTCTTCAACTTGGCTCATCTCCTCTTTCTTCAAATTCAGTATCCCCACGGCCACGAGAGCAGCTTCACAAATTCACTGTGTCTGTCAGTGTAATACAAATTCCAATTCTTCTCGCGGAATCCAACGCCGTTGGGTTGAAGCATTCGATCAATCCCTCGCATCTCCGGAGAGATTCACAGTAGCTTCATACAATATACTTGCTGATAGAAATGCTTCTCAACACTCTGATTTATACGTTAACGTTCCTTCTCGTTACATCAATTGGAATCGTCGTCAAAAGATTCTTTCTGATGAACTTTTTCAATGGAACCCTGATATTATCTGCTTACAAAGACGCACTGGAGATACATCTGACGGTTGTGCAATGTTTTGGAAAACTGATAAGTTCCGATTGTTAGATGGAGAAAGCATTCAATATAAGAACATTGGCCTTCGTGATAATGTTGCTCAACTTCTAGTTTTTGAGATGTCTGGATCTGACTCAAGAAGACTGTTGGTTGGTAATATCCACGTACTCTATAACCCAAACAGGGGAGAAGTTAAATTAGGTCAAATTCGTTTTCTCTCATCAAAAGCACAGTCCCTCTCAGAGAAATGGGGTAATGCCCCTGTAATCCTAGCTGGTGATTTTAACAGTACTCCTGAGAGTGGAATATACAAGTTCTTGTCAACGTCTGAGCTTAATATCAAGCTATATGACAGAAAGCAGTTATCTGGACAGAAACGCTGTCGTCCTGCTCAAGTTTTAGGCGAGAAAAAAGAAACAGTTAGTCCATTTAGTTCACTGGATGGATTGTTAGACTGCTGGACAGATGAAGAGGTAAAAACTGCAACTGGTGATTCTGAGTGTCACTTGGCTGTTCATCCATTAAAGCTGAATAGTTCGTATGCCACAGTCAATGTACCTATTCATTCTTTTGGATCTGCTAGTACACGGGGATTCAATGATGAACCCCTGGCAACTTCCTATCACTCAAAGTTTCTTGGTACTGTAGATTATTTATGGTACTCTGAAGGTATTGTACCAACTAGAGTTCTTGATACCGTTTCAATTAGTGATCTCCTGAGGGAAGGTGGTCTCCCATGCAAGAAAGTGGGAAGCGACCATTTGGCGTTGCTGTCTGAATTTTCCTTCTCGGTGACCCATAATAAATCTACAGACATAGCTGCAGCAGCGGCATCACCTAGAGTAGATGTTGAATAG

Protein sequence

>Msa0576640

MASSTWLISSFFKFSIPTATRAASQIHCVCQCNTNSNSSRGIQRRWVEAFDQSLASPERFTVASYNILADRNASQHSDLYVNVPSRYINWNRRQKILSDELFQWNPDIICLQRRTGDTSDGCAMFWKTDKFRLLDGESIQYKNIGLRDNVAQLLVFEMSGSDSRRLLVGNIHVLYNPNRGEVKLGQIRFLSSKAQSLSEKWGNAPVILAGDFNSTPESGIYKFLSTSELNIKLYDRKQLSGQKRCRPAQVLGEKKETVSPFSSLDGLLDCWTDEEVKTATGDSECHLAVHPLKLNSSYATVNVPIHSFGSASTRGFNDEPLATSYHSKFLGTVDYLWYSEGIVPTRVLDTVSISDLLREGGLPCKKVGSDHLALLSEFSFSVTHNKSTDIAAAAASPRVDVE*